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transcription factors

  • Genetic Variability of Long Terminal Repeat Region between HIV-2 Groups Impacts Transcriptional Activity
    Genome Replication and Regulation of Viral Gene Expression
    Genetic Variability of Long Terminal Repeat Region between HIV-2 Groups Impacts Transcriptional Activity

    Over 1 million patients are infected with HIV-2, which is often described as an attenuated retroviral infection. Patients frequently have undetectable viremia and evolve at more slowly toward AIDS than HIV-1-infected patients. Several studies have reported a smaller viral reservoir in peripheral blood mononuclear cells in HIV-2-infected patients than in HIV-1-infected patients, while others have found similar sizes of reservoirs but a...

    Quentin Le Hingrat, Benoit Visseaux, Mélanie Bertine, Lise Chauveau, Olivier Schwartz, Fidéline Collin, Florence Damond, Sophie Matheron, Diane Descamps, Charlotte Charpentier
    and on behalf of the ANRS HIV-2 CO5 Cohort
  • TAF Family Proteins and MEF2C Are Essential for Epstein-Barr Virus Super-Enhancer Activity
    Transformation and Oncogenesis
    TAF Family Proteins and MEF2C Are Essential for Epstein-Barr Virus Super-Enhancer Activity

    SEs play critical roles in cancer development. Since SEs assemble much bigger protein complexes on enhancers than typical enhancers (TEs), they are more sensitive than TEs to perturbations. Understanding the protein composition of SEs that are linked to key oncogenes may identify novel therapeutic targets. A genome-wide CRISPR screen specifically identified proteins essential for MYC ESE activity but not simian virus 40 (SV40) enhancer...

    Chong Wang, Sizun Jiang, Luyao Zhang, Difei Li, Jun Liang, Yohei Narita, Isabella Hou, Qian Zhong, Benjamin E. Gewurz, Mingxiang Teng, Bo Zhao
  • A Noncanonical Basic Motif of Epstein-Barr Virus ZEBRA Protein Facilitates Recognition of Methylated DNA, High-Affinity DNA Binding, and Lytic Activation
    Genome Replication and Regulation of Viral Gene Expression
    A Noncanonical Basic Motif of Epstein-Barr Virus ZEBRA Protein Facilitates Recognition of Methylated DNA, High-Affinity DNA Binding, and Lytic Activation

    The binding of ZEBRA to methylated and unmethylated viral DNA triggers activation of the EBV lytic cycle, leading to viral replication and, in some patients, cancer development. Our work thoroughly examines how ZEBRA uses a previously unrecognized basic motif to bind nonmethylated and methylated DNA targets, leading to viral lytic activation. Our findings show that two different positively charged motifs, including the canonical BZIP...

    Erin Weber, Olga Buzovetsky, Lee Heston, Kuan-Ping Yu, Kirsten M. Knecht, Ayman El-Guindy, George Miller, Yong Xiong
  • RNA Polymerase Mutations Selected during Experimental Evolution Enhance Replication of a Hybrid Vaccinia Virus with an Intermediate Transcription Factor Subunit Replaced by the Myxoma Virus Ortholog
    Genetic Diversity and Evolution
    RNA Polymerase Mutations Selected during Experimental Evolution Enhance Replication of a Hybrid Vaccinia Virus with an Intermediate Transcription Factor Subunit Replaced by the Myxoma Virus Ortholog

    Previous studies demonstrated the experimental evolution of vaccinia virus (VACV) following deletion of a host range gene important for evasion of host immune defenses. We have extended experimental evolution to essential genes that cannot be deleted but could be replaced by a divergent orthologous gene from another poxvirus. Replacement of a VACV transcription factor gene with one from a distantly related poxvirus led to decreased...

    Carey A. Stuart, Erik K. Zhivkoplias, Tatiana G. Senkevich, Linda S. Wyatt, Bernard Moss
  • Genome Replication and Regulation of Viral Gene Expression
    Identification and Functional Characterization of Phosphorylation Sites of the Human Papillomavirus 31 E8^E2 Protein
    Saskia van de Poel, Marcel Dreer, Ana Velic, Boris Macek, Praveen Baskaran, Thomas Iftner, Frank Stubenrauch
  • Structure and Assembly
    Crystal Structure of the DNA-Binding Domain of Human Herpesvirus 6A Immediate Early Protein 2
    Mitsuhiro Nishimura, Junjie Wang, Aika Wakata, Kento Sakamoto, Yasuko Mori
  • Genome Replication and Regulation of Viral Gene Expression
    Identification of Vaccinia Virus Replisome and Transcriptome Proteins by Isolation of Proteins on Nascent DNA Coupled with Mass Spectrometry
    Tatiana G. Senkevich, George C. Katsafanas, Andrea Weisberg, Lisa R. Olano, Bernard Moss
  • Virus-Cell Interactions
    TRIM25 Is Required for the Antiviral Activity of Zinc Finger Antiviral Protein
    Xiaojiao Zheng, Xinlu Wang, Fan Tu, Qin Wang, Zusen Fan, Guangxia Gao
  • Virus-Cell Interactions
    The SWI/SNF Chromatin Regulator BRG1 Modulates the Transcriptional Regulatory Activity of the Epstein-Barr Virus DNA Polymerase Processivity Factor BMRF1
    Mei-Tzu Su, Ya-Ting Wang, Yen-Ju Chen, Su-Fang Lin, Ching-Hwa Tsai, Mei-Ru Chen
  • Pathogenesis and Immunity
    Two White Spot Syndrome Virus MicroRNAs Target the Dorsal Gene To Promote Virus Infection in Marsupenaeus japonicus Shrimp
    Qian Ren, Xin Huang, Yalei Cui, Jiejie Sun, Wen Wang, Xiaobo Zhang

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