Table 1

Summary of sequencing dataa

SampleNo. of raw readsNo. aligned with KSHVbFraction (%)Mean coverage (fold)No. of FAIRE peaksc
BC19,023,98131,9870.3511.5924
BCBL126,983,91126,7860.109.7127
KSHV-BJAB9,961,33925,4700.269.2228
KSHV-HUVEC72,447,91717,2880.026.2623
L1-TIVE79,435,3205,6530.012.0515
  • a All raw reads have been submitted to the NIH archive under accession number XYZ.

  • b KSHV reference genome NC_009333.

  • c Using MACS2, assuming an average fragment size of 250 bp.