Table 1

A summary of the sequences used in this study

Retroelement typeNo. of sequencesAvg length (bp)% A% C% G% T
LTR ERV
    ERV-11,9564,37928.824.619.027.6
    ERV-K3214,72331.621.019.428.0
    ERV-L6654,45028.721.023.426.9
L121,9304,78840.120.318.421.1
SINE Alu24,00030930.723.128.118.0
Human reference genes4,3225,23126.523.824.225.5
Nonhypermutated HIV-12,3789,03036.217.624.022.1
Hypermutated HIV-1
    In vivo838,70039.117.521.322.2
    In vitro198,03037.517.722.222.5