TABLE 2.

Number and percentage of host genes affected by infection of each virus

StrainNo. (%) of host genes affecteda
UpregulationDownregulationTotal
Ni241 (0.59)76 (0.19)317 (0.77)
Ni-CE765 (1.86)113 (0.27)878 (2.14)
CE(NiN)628 (1.53)130 (0.32)758 (1.85)
  • a A total of 41,063 genes were analyzed. A gene was considered differentially expressed if the expression level was 3-fold higher or lower than the level in mock-infected cells.