Table 3.

Association indices for pairwise comparison of proviral sequences from different tissuesa

SubjectAssociation index for sequences from:
LN and LFLN and COLN and LUCO and LF
NA371b 0.25
NA4250.41
NA116 0.26 c NDd
NA200.56
NA1990.44
NA380.520.560.50
NA420 0.019 0.033 0.0087
NA246 0.029 0.030 0.18 0.26
NA284 0.0020 0.095 0.067
NA369 0.0086 0.71 0.036
NA118 0.059 0.40
NA21 0.00024 0.28 0.85 0.0052
NA446 0.044 0.52 0.0066
NA25 0.0027 0.12 0.012 0.089
  • a LN, lymph node; LF, left frontal region of the brain; CO, colon; LU, lung.

  • b Sequences unavailable for comparison.

  • c Association index values indicating separate virus populations are set in bold.

  • d ND, not done.