Journal of Virology: 91 (6)

March 2017; Volume 91,Issue 6

Editorial

Free

Editorial
Classic Spotlight, 1978 and 1979: Articles of Significant Interest Selected from the Journal of Virology Archives by the Editors

Spotlight

Free

Spotlight
Articles of Significant Interest Selected from This Issue by the Editors

Gem

Free

Gem
Unraveling the Armor of a Killer: Evasion of Host Defenses by African Swine Fever Virus
Ana Luisa Reis, Chris Netherton, Linda K. Dixon

Structure and Assembly

Open Access

Structure and Assembly
Virion Structure of Black Queen Cell Virus, a Common Honeybee Pathogen
Radovan Spurny, Antonín Přidal, Lenka Pálková, Hoa Khanh Tran Kiem, Joachim R. de Miranda, Pavel Plevka
Structure and Assembly
A Point Mutation in the N-Terminal Amphipathic Helix α₀ in NS3 Promotes Hepatitis C Virus Assembly by Altering Core Localization to the Endoplasmic Reticulum and Facilitating Virus Budding
Yu Yan, Ying He, Bertrand Boson, Xuesong Wang, François-Loïc Cosset, Jin Zhong

Genome Replication and Regulation of Viral Gene Expression

Genome Replication and Regulation of Viral Gene Expression | Spotlight
A Conserved Glycine Residue Is Required for Proper Functioning of a Baculovirus VP39 Protein
Susumu Katsuma, Ryuhei Kokusho
Genome Replication and Regulation of Viral Gene Expression
5′-Phospho-RNA Acceptor Specificity of GDP Polyribonucleotidyltransferase of Vesicular Stomatitis Virus in mRNA Capping
Minako Ogino, Tomoaki Ogino
Genome Replication and Regulation of Viral Gene Expression | Spotlight
Characterizing HIV-1 Splicing by Using Next-Generation Sequencing
Ann Emery, Shuntai Zhou, Elizabeth Pollom, Ronald Swanstrom

Genetic Diversity and Evolution

Open Access

Genetic Diversity and Evolution
Sensitive Next-Generation Sequencing Method Reveals Deep Genetic Diversity of HIV-1 in the Democratic Republic of the Congo
Mary A. Rodgers, Eduan Wilkinson, Ana Vallari, Carole McArthur, Larry Sthreshley, Catherine A. Brennan, Gavin Cloherty, Tulio de Oliveira
Open Access

Genetic Diversity and Evolution
Phyloepidemiological Analysis Reveals that Viral Divergence Led to the Paucity of Simian Immunodeficiency Virus SIVmus/gsn/mon Infections in Wild Populations
Fabian Schmidt, Florian Liegeois, Edward J. D. Greenwood, Matthew LeBreton, James Lester, Luc Deleplancque, Martine Peeters, Avelin Aghokeng, Ubald Tamoufe, Joseph L. D. Diffo, Jean M. Takuo, Nathan D. Wolfe, Eric Leroy, François Rouet, Jonathan L. Heeney
Genetic Diversity and Evolution
Domain Organization and Evolution of the Highly Divergent 5′ Coding Region of Genomes of Arteriviruses, Including the Novel Possum Nidovirus
Anastasia Gulyaeva, Magdalena Dunowska, Erik Hoogendoorn, Julia Giles, Dmitry Samborskiy, Alexander E. Gorbalenya
Genetic Diversity and Evolution
Characterization of Hepatitis C Virus (HCV) Envelope Diversification from Acute to Chronic Infection within a Sexually Transmitted HCV Cluster by Using Single-Molecule, Real-Time Sequencing
Cynthia K. Y. Ho, Jayna Raghwani, Sylvie Koekkoek, Richard H. Liang, Jan T. M. Van der Meer, Marc Van Der Valk, Menno De Jong, Oliver G. Pybus, Janke Schinkel, Richard Molenkamp
and on behalf of the MOSAIC (MSM Observational Study of Acute Infection with Hepatitis C) Study Group

Virus-Cell Interactions

Virus-Cell Interactions
The Viral Bcl-2 Homologs of Kaposi's Sarcoma-Associated Herpesvirus and Rhesus Rhadinovirus Share an Essential Role for Viral Replication
Antonio Gallo, Melanie Lampe, Thomas Günther, Wolfram Brune
Virus-Cell Interactions
Adenovirus Modulates Toll-Like Receptor 4 Signaling by Reprogramming ORP1L-VAP Protein Contacts for Cholesterol Transport from Endosomes to the Endoplasmic Reticulum
Nicholas L. Cianciola, Stacey Chung, Danny Manor, Cathleen R. Carlin
Virus-Cell Interactions
Studies on the Interaction of Tumor-Derived HD5 Alpha Defensins with Adenoviruses and Implications for Oncolytic Adenovirus Therapy
Charles Vragniau, Jens-Martin Hübner, Peter Beidler, Sucheol Gil, Kamola Saydaminova, Zhuo-Zhuang Lu, Roma Yumul, Hongjie Wang, Maximilian Richter, Pavel Sova, Charles Drescher, Pascal Fender, André Lieber
Virus-Cell Interactions | Spotlight
Chikungunya, Influenza, Nipah, and Semliki Forest Chimeric Viruses with Vesicular Stomatitis Virus: Actions in the Brain
Anthony N. van den Pol, Guochao Mao, Anasuya Chattopadhyay, John K. Rose, John N. Davis
Virus-Cell Interactions
Heat Shock Protein 90 Ensures Efficient Mumps Virus Replication by Assisting with Viral Polymerase Complex Formation
Hiroshi Katoh, Toru Kubota, Yuichiro Nakatsu, Maino Tahara, Minoru Kidokoro, Makoto Takeda
Virus-Cell Interactions
Structural Insight into African Swine Fever Virus A179L-Mediated Inhibition of Apoptosis
Suresh Banjara, Sofia Caria, Linda K. Dixon, Mark G. Hinds, Marc Kvansakul
Virus-Cell Interactions
GRP78 Is an Important Host Factor for Japanese Encephalitis Virus Entry and Replication in Mammalian Cells
Minu Nain, Sriparna Mukherjee, Sonali Porey Karmakar, Adrienne W. Paton, James C. Paton, M. Z. Abdin, Anirban Basu, Manjula Kalia, Sudhanshu Vrati
Virus-Cell Interactions
Ultrasensitive HIV-1 p24 Assay Detects Single Infected Cells and Differences in Reservoir Induction by Latency Reversal Agents
Caroline Pereira Bittencourt Passaes, Timothée Bruel, Jérémie Decalf, Annie David, Mathieu Angin, Valerie Monceaux, Michaela Muller-Trutwin, Nicolas Noel, Katia Bourdic, Olivier Lambotte, Matthew L. Albert, Darragh Duffy, Olivier Schwartz, Asier Sáez-Cirión
and ANRS RHIVIERA Consortium
Virus-Cell Interactions
SUN2 Silencing Impairs CD4 T Cell Proliferation and Alters Sensitivity to HIV-1 Infection Independently of Cyclophilin A
Daniel A. Donahue, Françoise Porrot, Norbert Couespel, Olivier Schwartz
Virus-Cell Interactions
Role of Litopenaeus vannamei Yin Yang 1 in the Regulation of the White Spot Syndrome Virus Immediate Early Gene ie1
Ping-Han Huang, Ting-Yi Huang, Pei-Si Cai, Li-Kwan Chang
Virus-Cell Interactions
Subcellular Localization of HIV-1 gag-pol mRNAs Regulates Sites of Virion Assembly
Jordan T. Becker, Nathan M. Sherer
Virus-Cell Interactions | Spotlight
Viral RNA at Two Stages of Reovirus Infection Is Required for the Induction of Necroptosis
Angela K. Berger, Bradley E. Hiller, Deepti Thete, Anthony J. Snyder, Encarnacion Perez, Jason W. Upton, Pranav Danthi
Virus-Cell Interactions
Herpes Simplex Virus 1 Abrogates the cGAS/STING-Mediated Cytosolic DNA-Sensing Pathway via Its Virion Host Shutoff Protein, UL41
Chenhe Su, Chunfu Zheng
Virus-Cell Interactions
Ovine Herpesvirus 2 Glycoproteins B, H, and L Are Sufficient for, and Viral Glycoprotein Ov8 Can Enhance, Cell-Cell Membrane Fusion
Salim M. AlHajri, Cristina W. Cunha, Anthony V. Nicola, Hector C. Aguilar, Hong Li, Naomi S. Taus
Virus-Cell Interactions
Klebsiella Phage ΦK64-1 Encodes Multiple Depolymerases for Multiple Host Capsular Types
Yi-Jiun Pan, Tzu-Lung Lin, Ching-Ching Chen, Yun-Ting Tsai, Yi-Hsiang Cheng, Yi-Yin Chen, Pei-Fang Hsieh, Yi-Tsung Lin, Jin-Town Wang

Cellular Response to Infection

Cellular Response to Infection
BRD4 Couples NF-κB/RelA with Airway Inflammation and the IRF-RIG-I Amplification Loop in Respiratory Syncytial Virus Infection
Bing Tian, Jun Yang, Yingxin Zhao, Teodora Ivanciuc, Hong Sun, Roberto P. Garofalo, Allan R. Brasier
Cellular Response to Infection
T-Cell Receptor (TCR) Clonotype-Specific Differences in Inhibitory Activity of HIV-1 Cytotoxic T-Cell Clones Is Not Mediated by TCR Alone
Nina C. Flerin, Huabiao Chen, Tynisha D. Glover, Pedro A. Lamothe, Jian Hua Zheng, Justin W. Fang, Zaza M. Ndhlovu, Evan W. Newell, Mark M. Davis, Bruce D. Walker, Harris Goldstein

Transformation and Oncogenesis

Transformation and Oncogenesis
Epstein-Barr Virus-Encoded Latent Membrane Protein 1 Upregulates Glucose Transporter 1 Transcription via the mTORC1/NF-κB Signaling Pathways
Jun Zhang, Lin Jia, Weitao Lin, Yim Ling Yip, Kwok Wai Lo, Victoria Ming Yi Lau, Dandan Zhu, Chi Man Tsang, Yuan Zhou, Wen Deng, Hong Lok Lung, Maria Li Lung, Lai Man Cheung, Sai Wah Tsao
Transformation and Oncogenesis
Human Papillomavirus 16 E6 Upregulates APOBEC3B via the TEAD Transcription Factor
Seiichiro Mori, Takamasa Takeuchi, Yoshiyuki Ishii, Takashi Yugawa, Tohru Kiyono, Hiroshi Nishina, Iwao Kukimoto

Prions

Prions
Melanin or a Melanin-Like Substance Interacts with the N-Terminal Portion of Prion Protein and Inhibits Abnormal Prion Protein Formation in Prion-Infected Cells
Taichi Hamanaka, Keiko Nishizawa, Yuji Sakasegawa, Ayumi Oguma, Kenta Teruya, Hiroshi Kurahashi, Hideyuki Hara, Suehiro Sakaguchi, Katsumi Doh-ura

Vaccines and Antiviral Agents

Vaccines and Antiviral Agents
Generation of a Genetically Stable High-Fidelity Influenza Vaccine Strain
Tadasuke Naito, Kotaro Mori, Hiroshi Ushirogawa, Naoki Takizawa, Eri Nobusawa, Takato Odagiri, Masato Tashiro, Ryosuke L. Ohniwa, Kyosuke Nagata, Mineki Saito
Vaccines and Antiviral Agents
Vaccine Efficacy of Inactivated, Chimeric Hemagglutinin H9/H5N2 Avian Influenza Virus and Its Suitability for the Marker Vaccine Strategy
Se Mi Kim, Young-Il Kim, Su-Jin Park, Eun-Ha Kim, Hyeok-il Kwon, Young-Jae Si, In-Won Lee, Min-Suk Song, Young Ki Choi
Vaccines and Antiviral Agents
Identification of a Continuous Neutralizing Epitope within UL128 of Human Cytomegalovirus
Flavia Chiuppesi, Teodora Kaltcheva, Zhuo Meng, Peter A. Barry, Don J. Diamond, Felix Wussow

Pathogenesis and Immunity

Pathogenesis and Immunity | Spotlight
Matrix Metalloproteinase Activity in Infections by an Encephalitic Virus, Mouse Adenovirus Type 1
Shanna L. Ashley, Carla D. Pretto, Matthew T. Stier, Padma Kadiyala, Luiza Castro-Jorge, Tien-Huei Hsu, Robert Doherty, Kelly E. Carnahan, Maria G. Castro, Pedro R. Lowenstein, Katherine R. Spindler
Pathogenesis and Immunity
Cytokines Elevated in HIV Elite Controllers Reduce HIV Replication In Vitro and Modulate HIV Restriction Factor Expression
Evan S. Jacobs, Sheila M. Keating, Mohamed Abdel-Mohsen, Stuart L. Gibb, John W. Heitman, Heather C. Inglis, Jeffrey N. Martin, Jinbing Zhang, Zhanna Kaidarova, Xutao Deng, Shiquan Wu, Kathryn Anastos, Howard Crystal, Maria C. Villacres, Mary Young, Ruth M. Greenblatt, Alan L. Landay, Stephen J. Gange, Steven G. Deeks, Elizabeth T. Golub, Satish K. Pillai, Philip J. Norris
and the Women's Interagency HIV Study
Pathogenesis and Immunity
MAVS Is Essential for Primary CD4⁺ T Cell Immunity but Not for Recall T Cell Responses following an Attenuated West Nile Virus Infection
Huanle Luo, Evandro Winkelmann, Guorui Xie, Rong Fang, Bi-Hung Peng, Li Li, Helen M. Lazear, Slobodan Paessler, Michael S. Diamond, Michael Gale, Alan D. Barrett, Tian Wang
Pathogenesis and Immunity
Human Cytomegalovirus (HCMV)-Specific CD4⁺ T Cells Are Polyfunctional and Can Respond to HCMV-Infected Dendritic Cells In Vitro
Sarah E. Jackson, George X. Sedikides, Gavin M. Mason, Georgina Okecha, Mark R. Wills
Pathogenesis and Immunity
Efficient Vpu-Mediated Tetherin Antagonism by an HIV-1 Group O Strain
Katharina Mack, Kathrin Starz, Daniel Sauter, Simon Langer, Frederic Bibollet-Ruche, Gerald H. Learn, Christina M. Stürzel, Marie Leoz, Jean-Christophe Plantier, Matthias Geyer, Beatrice H. Hahn, Frank Kirchhoff
Pathogenesis and Immunity
Exosome-Mediated Intercellular Communication between Hepatitis C Virus-Infected Hepatocytes and Hepatic Stellate Cells
Pradip B. Devhare, Reina Sasaki, Shubham Shrivastava, Adrian M. Di Bisceglie, Ranjit Ray, Ratna B. Ray

Retraction

Free

Retraction
Retraction for Pfeffer et al., P0 of Beet Western Yellows Virus Is a Suppressor of Posttranscriptional Gene Silencing
S. Pfeffer, P. Dunoyer, F. Heim, K. E. Richards, G. Jonard, V. Ziegler-Graff

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Table of Contents

Editorial

Spotlight

Gem

Structure and Assembly

Genome Replication and Regulation of Viral Gene Expression

Genetic Diversity and Evolution

Virus-Cell Interactions

Cellular Response to Infection

Transformation and Oncogenesis

Prions

Vaccines and Antiviral Agents

Pathogenesis and Immunity

Retraction

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