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Journal of Virology, November 2000, p. 10341-10348, Vol. 74, No. 22
Institute of Botany, Academia Sinica, Taipei,
Taiwan 115,1 and Graduate Institute of
Agricultural Biotechnology, National Chung Hsing University, Taichung,
Taiwan 400,2 Republic of China
Received 30 March 2000/Accepted 15 August 2000
Satellite RNA of bamboo mosaic potexvirus (satBaMV), a
single-stranded positive-sense RNA encoding a nonstructural protein of
20 kDa (P20), depends on bamboo mosaic potexvirus (BaMV) for replication and encapsidation. A full-length cDNA clone of satBaMV was
used to examine the sequences required for the synthesis of potexvirus
subgenomic RNAs (sgRNAs). Subgenomic
promoter-like sequences (SGPs), 107 nucleotides (nt) upstream from the
capsid protein (CP) gene of BaMV-V, were inserted upstream of the start codon of the P20 gene of satBaMV. Insertion of SGPs gave rise to the
synthesis of sgRNA of satBaMV in protoplasts of
Nicotiana benthamiana and leaves of Chenopodium
quinoa when coinoculated with BaMV-V genomic RNA.
Moreover, both the satBaMV cassette and its sgRNA were
encapsidated. From analysis of the SGPs by deletion mutation, we
concluded that an SGP contains one core promoterlike sequence (nt
0022-538X/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Generation of Subgenomic RNA Directed by a
Satellite RNA Associated with Bamboo Mosaic Potexvirus: Analyses of
Potexvirus Subgenomic RNA Promoter
30
through +16), two upstream enhancers (nt
59 through
31 and
91
through
60), and one downstream enhancer (nt +17 through +52), when
the transcription initiation site is taken as +1. Site-directed
mutagenesis and compensatory mutation to disrupt and restore potential
base pairing in the core promoter-like sequence suggest that the
stem-loop structure is important for the function of SGP in vivo.
Likewise, the insertion of a putative SGP of the BaMV open reading
frame 2 gene or a heterologous SGP of potato virus X resulted in
generation of an sgRNA. The satBaMV cassette should be a
useful tool to gain insight into sequences required for the synthesis
of potexvirus sgRNAs.
*
Corresponding author. Mailing address: Institute of
Botany, Academia Sinica, Taipei, Taiwan 115, Republic of China. Phone: 886-2-2789-9590, ext. 124. Fax: 886-2-2782-7954. E-mail:
nslin{at}sinica.edu.tw.
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