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Journal of Virology, March 2008, p. 2106-2119, Vol. 82, No. 5
0022-538X/08/$08.00+0 doi:10.1128/JVI.02337-07
Copyright © 2008, American Society for Microbiology. All Rights Reserved.

Dimiter G. Demirov,1,
Catherine S. Adamson,1
Ferri Soheilian,2
Kunio Nagashima,2
Andrew G. Stephen,3
Robert J. Fisher,3 and
Eric O. Freed1*
Virus-Cell Interaction Section, HIV Drug Resistance Program, National Cancer Institute at Frederick, Frederick, Maryland 21702-1201,1 Image Analysis Laboratory, Advanced Technology Program, SAIC-Frederick, National Cancer Institute at Frederick, Frederick, Maryland 21702-1201,2 Protein Chemistry Laboratory, Advanced Technology Program, SAIC-Frederick, National Cancer Institute at Frederick, Frederick, Maryland 21702-12013
Received 29 October 2007/ Accepted 11 December 2007
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The Gag precursor protein is the primary structural component of retrovirus particles (19). Expression of Gag alone in appropriate host cells is sufficient to drive the assembly and release of noninfectious, immature viruslike particles (VLPs). Unspliced genomic mRNA transcripts are translated into a Gag polyprotein precursor that traffics within the cytoplasm to specific membrane-associated sites, typically at the plasma membrane, where virus assembly takes place. Specific targeting of retroviral Gag proteins to the site of virus assembly is largely regulated by the matrix (MA) domain (19), and this appears to be the case for FIV as well (37). At the site of assembly, Gag molecules associate with the lipid bilayer and multimerize, thereby inducing membrane curvature away from the cytoplasm, resulting in the formation of spherical immature particles. The release of virions from the plasma membrane requires specific host cell factors (6, 13, 43). Virion maturation, which is virtually concomitant with particle release, is triggered by the activation of the pol-encoded viral protease (PR), which cleaves Gag precursors into the mature Gag proteins: MA, capsid (CA), nucleocapsid (NC), and C-terminal peptide (p6 in HIV-1). Cleavage of the less abundant Gag-Pol precursor proteins also occurs at this time, resulting in the generation of several enzymes, including the mature PR, reverse transcriptase (RT), integrase (IN), and a dUTP-ase in nonprimate lentiviruses such as FIV and equine infectious anemia virus (EIAV) (49). When visualized by thin-section transmission electron microscopy (EM), released immature particles appear as hollow spheres, whereas mature lentiviral particles contain electron-dense conical cores.
We and others have shown that short peptide motifs in retroviral Gag precursor proteins are essential for proper release of assembled virions from infected cells in culture; these motifs are therefore referred to as "late" (L) domains (6, 13, 15, 23, 26, 43, 47, 55, 67, 72). Retroviral late domains apparently mimic cellular proteins that interact with the highly conserved endosomal sorting complexes required for transport (ESCRT-I, -II, and -III) first identified by studying yeast vacuolar protein sorting (Vps) mutants (2, 3, 5, 30, 42, 56). To date, three retroviral late domains motifs have been described: Pro-Thr/Ser-Ala-Pro [P(T/S)AP], Tyr-Pro-Asp-Leu (YPDL or the related sequence LYPxnLxxL, where "x" is any amino acid), and Pro-Pro-Pro-Tyr (PPPY). The P(T/S)AP motif is conserved among a number of lentiviruses (Fig. 1A) and functions by interacting directly with the ESCRT-I component Tsg101 (14, 21, 41, 53, 54, 66). EIAV utilizes a YPDL motif (Fig. 1A) to interact with the ESCRT-associated protein Alix (apoptosis-linked-gene-2 [ALG2]-interacting protein X; formerly referred to as AIP1) for virus release (11, 40, 63, 67). HIV also contains a degenerate form of this motif, LYPxnLxxL, which binds Alix (11, 18, 33, 40, 44, 63) and can facilitate virus release under specific conditions (63). The third type of retroviral late domain, PPPY, is found in a number of retroviruses, including murine leukemia virus (75), Rous sarcoma virus (72), human T-cell leukemia virus (25, 31, 68), and Mason-Pfizer monkey virus (74). PPPY motifs promote retrovirus release by interacting with Nedd4-like ubiquitin ligases that may be peripherally associated with endosomal sorting machinery (39). FIV contains a potential Tsg101-binding (PSAP) motif near the C terminus of its Gag precursor protein and also bears an LxxL motif that could possibly serve as a binding site for Alix (Fig. 1A). We hypothesized that the PSAP motif of FIV Gag was likely to interact with Tsg101 in human cells in the same manner as HIV-1 Gag, based on its high degree of conservation, and would thus be required for virus release in human cells. Similarly, a feline homolog of Tsg101 could potentially interact with FIV Gag via the PSAP motif and promote virus particle budding in feline cells. In addition, we speculated that the LLDL motif of FIV Gag might serve an auxiliary role in virus budding by interacting with Alix in either human or feline cells.
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FIG. 1. A highly conserved P(T/S)AP motif in FIV Gag is required for FIV release and replication. (A) An alignment of C-terminal sequences from lentiviral Gag proteins is shown, with the highly conserved P(T/S)APP motif highlighted (GenBank; National Center for Biotechnology Information; Entrez Genome). Abbreviations: SIVagm, SIV from African green monkey; Visna, visna/maedi lentivirus; BIV, bovine immunodeficiency virus. The host species of each virus is indicated. Sites of protease cleavage in the C-terminal domain of Gag liberating HIV-1 p6 and FIV p2 are marked with an arrow, resulting in the proposed numbering of amino acids in FIV p2 (17, 34, 65). Domains of FIV Gag and residues altered by site-directed mutagenesis in the present study are shown. (B) The PSAP motif in FIV Gag (p2) is required for efficient virus release. HeLa cells were transfected with an FIV-expression vector (FP93) and metabolically radiolabeled with [35S]Met/Cys. FIV proteins were detected in cell or virus fractions by immunoprecipitation with anti-FIVp24gag and resolved by SDS-PAGE. p50, full-length Gag precursor protein (MA-CA-p1-NC-p2); Gag processing intermediates p47, p40, and p33; p24, capsid (CA). The 45-kDa band detected in mock-transfected cells is a cross-reactive protein. Gag protein levels were quantified by phosphorimager analysis, and the relative virus release efficiency was calculated as the ratio of virion-associated Gag to total Gag (cells plus virus), normalized to the WT FIV release, and the results were averaged from at least three independent experiments. Error bars indicate the standard deviations (SD). (C) CrFK cells were infected with RT-normalized WT or mutant FIV(Orf2rep) pseudotyped with VSV-G. The RT levels in culture supernatants were measured prior to each cell passage.
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As a first step toward gaining a better understanding of FIV assembly and release, we undertook a study aimed at characterizing both the viral and the cellular determinants of FIV budding. We observed that mutation of the FIV PSAP motif severely restricted virus release, as did Tsg101 depletion and dominant-negative Tsg101-based budding inhibitors. We also demonstrated direct binding of FIV-derived PSAP-containing peptides to Tsg101. However, in contrast to a previous report (38), mutation of the LxxL motif had no significant effect on virus particle production. Furthermore, FIV release was unaffected by Alix depletion or by Alix V domain overexpression, and binding between a C-terminal FIV Gag peptide and Alix was not detected. These results demonstrate that the PSAP motif of FIV Gag is the dominant late domain for this nonprimate lentivirus.
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Cell culture and transmission EM. Crandall feline kidney (CrFK) cells (a gift from S. Le Grice, HIV Drug Resistance Program, National Cancer Institute, Frederick, MD) and HeLa cells were maintained in Eagle minimal essential medium (American Type Culture Collection) supplemented with 10% fetal bovine serum (FBS; HyClone), penicillin, streptomycin, and glutamine (Gibco). For visualization of virions and VLPs by transmission EM, cells were either infected with cell-free preparations of FIV produced in CrFK cells or were transfected with FIV expression vectors. Transfections were carried out in six-well tissue culture dishes (Costar). Each well was seeded with 0.3 x 106 to 0.6 x 106 cells, followed by incubation for 12 to 24 h. Transfection medium contained 5 µl of Lipofectamine 2000 (Invitrogen) and 3 µg of FIV DNA diluted in 0.5 ml of Opti-MEM (Gibco). Cells were fixed in a 2% glutaraldehyde-100 mM sodium cacodylate solution and stored at 4°C. The methods for sample preparation and visualization of fixed cells by transmission EM were as described previously (20).
Virus release assays. FIV, EIAV, or HIV-1 proteins were detected by radioimmunoprecipitation assay (RIPA) based on methods previously described (20, 59, 70) with several modifications. Cultures of HeLa or CrFK cells were seeded at a density of 6 x 104 cells/cm2 24 h prior to transfection. Cells were transfected by using Lipofectamine 2000 according to the manufacturer's suggested protocol. Vectors expressing FIV, HIV-1, or EIAV were cotransfected with vectors overexpressing ESCRT-related proteins [TSG-F, TSG-5', TSG-3', Vps4A(E228Q), and Alix-V] or an empty vector [pBluescript SK(+); Stratagene]. Cells were washed briefly with DPBS and then metabolically labeled at 37°C with [35S]Met/Cys (Express protein labeling mix; Perkin-Elmer) in labeling medium (RPMI 1640 with 25 mM HEPES Cys–/Met– [Specialty Media] with 5% FBS). Released virions or VLPs were collected by filtration (0.4 µm, Millex-HA; Millipore) and ultracentrifugation at 100,000 x g for 45 min. Cell and virion samples were lysed in cell lysis buffer (0.5% Triton X-100, 300 mM NaCl, 50 mM Tris [pH 7.5], and protease inhibitors [Complete; Roche]). Insoluble material from cell lysates was concentrated by microcentrifugation, and the supernatant was precleared by adsorption with protein G-agarose (Invitrogen) suspended in RIPA buffer (0.1% Triton X-100, 300 mM NaCl, 50 mM Tris [pH 7.5]) and 0.1% bovine serum albumin (BSA). Virion and precleared cell lysates were immunoprecipitated with either mouse anti-FIV p24gag (clone PAK3-2C1), horse anti-EIAV ("Lady" serum; kindly provided by R. Montelaro, University of Pittsburgh, Pittsburgh, PA), or human anti-HIV-IG (obtained from the NIH AIDS Reference and Reagent Program) bound to protein G-agarose at 4°C. Immunoprecipitated cell lysates were washed three times in RIPA buffer and once with SDS-DOC wash (0.1% sodium dodecyl sulfate, 300 mM NaCl, 50 mM Tris [pH 7.5], 2.5 mM deoxycholic acid). Immunoprecipitated virus lysates were washed once with RIPA buffer. Immunoprecipitated proteins were eluted by boiling in Laemmli sample buffer, resolved by SDS-polyacrylamide gel electrophoresis (PAGE) in 12% acrylamide with 0.4% AcrylAide cross-linker (Lonza), fixed in 40% methanol-10% acetic acid-7.5% glycerol, and dehydrated. Labeled proteins were detected by autoradiography on phosphorimaging plates (Fujifilm) and quantitated by using QuantityOne software (Bio-Rad). Virus release efficiency was calculated as the ratio of released Gag over total Gag protein, normalized to the positive control (uninhibited WT Gag).
Immunofluorescence assays. Transfected cells were suspended by trypsinization, seeded onto eight-well chamber slides (Lab-Tek II; Nalge Nunc International) in normal growth medium (Eagle minimal essential medium with 10% FBS) at a density of 1 x 104 to 5 x 104 cells per well, and incubated for 18 to 24 h at 37°C. The adherence of cells was verified by phase-contrast microscopy, and then the cells were washed briefly with Dulbecco phosphate-buffered saline with Ca2+ and Mg2+ (DPBS+CaMg; Cambrex), fixed with 3.7% formaldehyde (Sigma) for 15 min, washed with 0.1 M glycine for 5 min, washed twice briefly with DPBS+CaMg, permeabilized with 0.1% Triton X-100 for 5 min, and blocked with 3% BSA (Sigma) for 5 min. Tsg101 derivatives were detected with rabbit anti-HA polyclonal antibody (Y-11; Santa Cruz) diluted 1:100 in 3% BSA. Primary antibodies were detected with Alexa 594-conjugated secondary antibodies (Molecular Probes) at a 1:100 dilution in 3% BSA. All solutions were prepared in DPBS+CaMg. Slides were mounted in Fluoromount-G (Electron Microscopy Sciences) and visualized with a Leica DM IRE2 inverted microscope equipped with a halogen lamp and a 63x APO oil-immersion objective lens. Images obtained from a Retiga Exi charge-coupled device camera (Qimaging Corp.) were processed by using OpenLab software (Improvision).
Construction of the stable CrFK/TSG-5' cell line. CrFK cells were transfected with pcGNM2/TSG-5'(zeo) or pcDNA3.1/zeo(–) as a negative control and then selected for resistance to phleomycin (InvivoGen) at 50 µg/ml. Stable HA-tagged TSG-5' expression was verified at 2 months posttransfection by Western blotting and was evaluated over the course of 1 year in culture by immunofluorescence assay.
Preparation of FIV or FIV/VSV-G and FIV RT assays. FIV-Petaluma was obtained from CrFK cells transfected with pFIV-34TF10. Cell-free virus stocks were prepared by 0.4-µm-pore-size filtration of cultured supernatants, which were then quantitated by RT assay using methods described for HIV-1 (71). For FIV/VSV-G, FIV(Orf2rep) clones were pseudotyped with VSV-G by transfection of HeLa cells with three plasmids (pFIV-Orf2rep, pFP93, and pHCMV-G) mixed with Lipofectamine 2000. (For more information on these vectors, see above.) Levels of VSV-G/FIV released into the culture medium were quantitated by RT assay. Supernatants were collected at 48 h posttransfection, when highest levels of RT activity were consistently observed. FIV titers achieved during replication experiments were also quantified from cultured cell supernatants by RT assay.
Western blot. Lysates prepared from cells treated with cell lysis buffer (described above) were denatured by boiling with Laemmli sample buffer containing 0.1 M dithiothreitol, resolved by SDS-PAGE, transferred by using a semidry blotting apparatus to polyvinylidene difluoride membranes (Immobilon-P; Millipore), and blocked with 5% milk in Tris-buffered saline (pH 7.4) with 0.1% Tween 20. Membranes were probed with mouse anti-HA (clone HA-7; Sigma) at a 1:10,000 dilution in blocking solution to detect HA-tagged Tsg101 protein. Primary antibody was detected with horseradish peroxidase (HRP)-conjugated goat anti-mouse immunoglobulin G (Amersham) at a 1:25,000 dilution in blocking solution, and HRP was detected by using Western Lightning chemiluminescent reagent Plus (Perkin-Elmer). Alix protein was detected with rabbit anti-Alix (kindly provided by W. Sundquist, University of Utah) and HRP-conjugated goat anti-rabbit immunoglobulin G. Blots were exposed to BioMax XAR film (Kodak) and developed with an X-ray film processor (Kodak). For quantitation of specific protein levels, blots were photographed with a digital camera enhanced for chemiluminescent detection (AlphaInnotec) and analyzed with QuantityOne (Bio-Rad) software.
Fluorescence anisotropy. Custom peptides were synthesized and N terminally labeled with fluorescein isothiocyanate (FITC; EZBiolabs). FITC-tagged peptides at 50 nM were incubated with 1 to 100 µM concentrations of either purified Tsg101 UEV domain or Alix V domain protein. Methods for detection of protein-peptide interactions by fluorescence anisotropy have been described previously (35).
Cloning and protein purification of Tsg101-UEV. The cloning and purification of the Tsg101 UEV domain has been described (35), and the resulting expression plasmid was a gift from M. Javad Aman (U.S. Army Medical Research Institute of Infectious Diseases, Frederick, MD). Briefly, the human Tsg101 UEV domain was cloned into pET21b (Novagen) to encode a C-terminal His-tagged fusion protein. Protein was expressed in Escherichia coli BL21(DE3)pLysS (Novagen), upon induction with IPTG (isopropyl-β-D-thiogalactopyranoside) and purified from solubilized cell pellets by using the HisTrap HP kit (Amersham Biosciences). Buffer exchange into PBS and protein concentration determinations were performed by using Vivaspin 20 columns rated with a molecular weight cutoff of 5,000 (Vivascience). The purified protein was verified by SDS-PAGE, and the protein concentration estimated with a Quick-Start Bradford protein assay (Bio-Rad).
Cloning and purification of Alix-V. The cloning and methods for purification of GST-Alix-V have been described (44, 61). Briefly, cDNA encoding residues 364 to 716 of human Alix was cloned into the pGST-parallel2 vector for expression in E. coli Rosetta2(DE3) cells (Novagen). Cells were cultured in LB containing ampicillin (100 µg/ml) and chloramphenicol (34 µg/ml) at 37°C to an optical density at 600 nm of 1.0. Overexpression of GST-tagged protein was induced with 0.5 mM IPTG, and cultures were incubated at 25°C for 24 h. Cell pellets were solubilized in extraction buffer (20 mM HEPES [pH 7.3], 100 mM NaCl, 5 mM MgCl2, 5% glycerol, protease inhibitors [Roche]), digested with lysozyme (0.5 mg/ml), and treated with benzonase (10 U/ml). GST-tagged protein was purified by using a GSTrap column (GE Healthcare). The GST tag was cleaved by using His6-TEV protease, and both GST and TEV protease were removed sequentially with GSTrap and HisTrap columns (GE Healthcare) and then dialyzed into PBS (pH 7.4). Each stage of protein purification was monitored by SDS-PAGE, and the final protein concentration was calculated by Bradford assay (Bio-Rad). Further concentration of protein was achieved by using Vivaspin 20 columns with a 10,000-molecular-weight cutoff (Vivascience).
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When transfected cells were examined by transmission EM, the budding of PSAP– mutant VLPs from the plasma membrane of CrFK and HeLa cells consistently appeared defective relative to WT FIV, whereas the LLDL– mutant VLPs appeared normal (Fig. 2). Mature WT particles produced in HeLa or CrFK cells (Fig. 2) were ca. 125 to 150 nm in diameter with condensed conical cores. Production of fully released WT immature particles, which were spherical and lacking an electron-dense core, was common in HeLa cells, approximately equal to the number of mature particles. In CrFK cells, fully released WT immature particles were rare, but some budding immature particles with nearly completed virion closure appeared tethered to the plasma membrane by short membrane extensions of
100 nm in length. In contrast, budding tubular PSAP– particles produced in HeLa cells appeared deficient in virion closure and were often found tethered to the plasma membrane by long stalks, extending 500 nm or more. No mature released PSAP– particles were detected in either cell type. In CrFK cells, budding and released immature PSAP– particles were also highly aberrant and included a mixture of comet-shaped and tubular structures, containing either singlet or doublet heads and highly extended tails, or irregularly shaped doublets and triplets with multiple crescent-shaped zones of electron density. These crescent-shaped zones appeared to be a result of multiple incomplete virion closures within a larger, contiguous particle that had been released from the cell. In contrast to the PSAP– mutant, budding and maturation of LLDL– mutant FIV particles from either cell type did not appear to be inhibited and was not significantly different from the WT in morphology and size. Release of immature, spherical
100-nm particles from HeLa cells, which was typical of WT FIV, was also observed for the LLDL– mutant (data not shown). These data suggest that FIV depends predominantly on the P(T/S)AP domain for virus release in HeLa and CrFK cells. Consistent with our biochemical data, the LLDL– mutation had no apparent effect on the production of mature virions.
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FIG. 2. Effect of PSAP– and LLDL– mutations on the morphogenesis of FIV budding. HeLa (left panels) or CrFK (right panels) cells were transfected with plasmids expressing WT or mutant FIV Gag and then fixed 2 days posttransfection. Typical images of both normal and defective virions and budding intermediates found associated with the plasma membrane are shown. All scale bars represent 100 nm unless indicated otherwise.
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FIG. 3. FIV release is sensitive to dominant-negative disruption of Tsg101 and Vps4A. (A) HeLa cells were mock transfected (lane "–") or were cotransfected with FIV expression vector (FP93) and pBS empty vector (lane "+"), or expression vectors encoding TSG-F (lane F), TSG-5' (lane 5'), TSG-3' (lane 3') or Vps4A(E228Q)-eGFP (lane V). Transfected cells were metabolically radiolabeled with [35S]Met/Cys; FIV proteins were detected in cell or virus fractions by immunoprecipitation with anti-FIVp24gag and resolved by SDS-PAGE. FIV Gag products p50, p40, p33, and p24 are described in the Fig. 1 legend. Relative virus release was determined as indicated in the Fig. 1 legend based on data obtained from five independent experiments ± SD. FIV release was found to be significantly different from the negative control (pBS) in all experimental samples by a two-tailed one-sample t test (P < 0.05). (B) HeLa or CrFK cells were transfected with the same vectors used in virus release assays described for panel A. Exogenous Tsg101 was visualized by immunofluorescence using a rabbit anti-HA antibody (red); Vps4EQ was visualized directly via its green fluorescent protein tag (green).
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FIG. 4. Full-length and truncated forms of Tsg101 disrupt FIV budding. HeLa and CrFK cells were transfected with FIV expression vector alone (FIV only) or were cotransfected with expression vectors encoding TSG-F, TSG-5', or TSG-3'. Cells were fixed for EM 1 day posttransfection. Typical images of both normal and defective virions and budding intermediates associated with the plasma membrane are shown. Scale bars represent 100 nm, unless indicated otherwise.
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FIG. 5. FIV release and replication are inhibited in CrFK cells by stable TSG-5' expression. (A, inset) Cell lysates from control CrFK(zeo) or TSG-5'-expressing cells [CrFK/TSG-5'(zeo)] at 4 months posttransfection were subjected to SDS-PAGE and immunoblotted with rabbit anti-HA antibody to detect stably expressed TSG-5' protein. (A) Control [CrFK(zeo)] or TSG-5'(zeo)-expressing cells were infected with 10-fold serial dilutions (105 to 107 RT cpm) of cell-free WT FIV (34TF10). RT activity in cultured supernatants was determined prior to each cell passage. (B) Control CrFK(zeo) or TSG-5'(zeo)-expressing cells were transfected with pFIV-34TF10 and fixed for EM at 2 days posttransfection. Typical lentiviral particles associated with the plasma membrane are shown. Scale bars, 100 nm. (C) FIV release assays in control [CrFK(zeo)] or TSG-5'(zeo)-expressing cells. The results were averaged from five independent experiments.
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FIV release is inhibited by siRNA-mediated knockdown of Tsg101 expression. To determine whether FIV requires human Tsg101 for efficient virus release in HeLa cells, we depleted endogenous levels of Tsg101 by siRNA transfection. First, to confirm gene-specific siRNA-mediated knockdown of Tsg101 protein expression, cells were transfected with siRNAs targeted to Tsg101 versus negative-control (nontargeting) siRNA without exogenous DNA. At 24 h posttransfection, siRNA transfection was repeated along with DNA expressing HA-tagged Tsg101 (TSG-F). Cells were lysed at 48 h, and the specific knockdown of Tsg101 expression was confirmed by immunoblotting with rabbit anti-HA (Fig. 6A). Neither Tsg101 nor control siRNA had any detectable effect on the endogenous protein expression levels of a nontargeted ESCRT-associated protein, Alix, even at the highest concentration of siRNA. By using serial siRNA (5 nM) transfections, parallel virus release assays were performed in HeLa cells with vectors expressing FIV or EIAV Gag (Fig. 6B). FIV release was inhibited by knockdown of Tsg101, whereas EIAV release was not. Similar to previous results with HIV-1 (21, 64), these data demonstrate that efficient FIV release in HeLa cells depends on Tsg101 protein expression.
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FIG. 6. Tsg101 depletion inhibits FIV but not EIAV release. (A) HeLa cells were serially transfected with siRNA at both 0 and 24 h and with the TSG-F expression vector at 24 h. Cell lysates, prepared at 48 h, were subjected to SDS-PAGE and immunoblotted with anti-HA antiserum. Exogenous Tsg101 expression was undetectable after cotransfection with as little as 2.5 nM Tsg101-specific siRNA but not with negative control siRNAs. In contrast, levels of endogenous Alix were not affected by Tsg101 siRNA. (B) HeLa cells were transfected with FIV or EIAV expression vectors in the absence of siRNA (–) or in the presence of 5 nM control siRNA (neg.) or Tsg101-specific siRNA. Transfected cells were metabolically radiolabeled with [35S]Met/Cys. FIV and EIAV proteins were detected in cell and virus fractions by immunoprecipitation with anti-FIVp24gag (FIV) or anti-EIAV horse antiserum (EIAV) and resolved by SDS-PAGE. FIV Gag products p50, p40, p33, and p24 are described in the Fig. 1 legend. In EIAV immunoprecipitations, p55 is the 55-kDa EIAV Gag precursor. Relative virus release efficiency was determined as indicated in the Fig. 1 legend, based on data obtained from three independent experiments, ± the SD.
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FIG. 7. Dominant-negative Alix V domain fragment inhibits the release of HIV-1 and EIAV, but not that of FIV. The domain structure of Alix protein is shown (top), with the Bro1, "V" (amino acids 364 to 716), and C-terminal proline-rich domains indicated. HeLa cells were cotransfected with expression vectors for EIAV, HIV-1, or FIV and empty vector (lanes "–") or plasmid expressing the Alix V domain (lanes "+"). Transfected cells were metabolically radiolabeled with [35S]Met/Cys. EIAV, HIV-1, and FIV proteins were detected in cell and virus fractions by immunoprecipitation with anti-EIAV horse antiserum (EIAV), HIV-Ig (HIV-1), or anti-FIVp24gag (FIV) and were resolved by SDS-PAGE. FIV Gag products p50, p40, p33, and p24 are described in the Fig. 1 legend. In EIAV samples, p55 denotes the 55-kDa EIAV Gag precursor. In HIV-1 samples, the Gag precursor protein Pr55Gag (p55) and the mature CA protein (p24) are indicated. Averages of relative virus release efficiency, determined as indicated in the Fig. 1 legend, were based on data obtained from three independent experiments (for FIV and HIV-1) ± the SD and one representative experiment for EIAV.
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FIG. 8. Analysis of Alix-V and Tsg101-UEV binding to peptides derived from FIV, HIV-1, and EIAV Gag by fluorescence anisotropy. (A) Alix-V protein binds to peptides derived from HIV-1 and EIAV Gag, but not FIV Gag. (B) Tsg101-UEV protein binds to FIV and HIV-1 Gag, but not EIAV Gag. Protein-peptide interactions were detected by fluorescence anisotropy upon the addition of increasing amounts of either purified Alix-V protein (A) or purified Tsg101-UEV protein (B) to a fixed concentration (50 nM) of FITC-labeled peptides, based on FIV, EIAV, or HIV-1 Gag C-terminal sequences. Calculated dissociation constants (Kd) are indicated.
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6-fold-greater affinity than HIV-1 Gag peptides for binding to Tsg101-UEV. These data demonstrate a direct binding between the PSAP motif of FIV Gag and the UEV domain of Tsg101 protein and are consistent with a requirement for both Tsg101 and the PSAP motif of FIV Gag in FIV release. |
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We demonstrate that FIV utilizes a PSAP late domain motif near the C terminus of Gag to interact with the UEV domain of human Tsg101 in HeLa cells to enhance virus release. This is partly based on sensitivity of FIV release to site-directed mutagenesis of proline residues in the PSAP motif of Gag (Fig. 1). This interaction appears to be conserved in feline cells, since release and replication of our FIV PSAP– mutant are severely inhibited in CrFK cells. In previous studies (15, 26) we have analyzed the virus release efficiency and replication kinetics of analogous HIV-1 mutants in a wide range of cell types, including epithelial cell lines, T-cell lines, and primary cells. We observed that the phenotype of HIV-1 PTAP mutations is strongly cell type dependent, with a complete block in some cell systems and a much more modest phenotype in others. Our results regarding the PSAP late domain of FIV Gag are consistent with those obtained with HIV-1. Furthermore, mutation of the PSAP motif also abolishes the normally high affinity of FIV Gag C-terminal peptides for binding to purified Tsg101 UEV domain in vitro (Fig. 8). Our measurement of the affinity of HIV-1 Gag C-terminal peptide (containing the PTAP late domain) for the UEV domain of Tsg101 is consistent with previous reports (35, 54). Surprisingly, peptides derived from FIV Gag (PSAP) bound Tsg101-UEV with consistently higher affinity than HIV-1 Gag (PTAP) peptide in our fluorescence anisotropy assay. Since mutagenesis of the LLDL domain at the C terminus of the FIV Gag peptide had no effect on Tsg101-UEV binding in vitro, the residues immediately flanking the P(T/S)AP motif seem to be important for this phenomenon. The potential ability of peptides derived from the C-terminal domain of FIV Gag to competitively inhibit the interaction of HIV-1 Gag with cellular Tsg101 in infected cells is currently under investigation.
FIV release requires Tsg101, based on siRNA-mediated depletion of Tsg101 expression in HeLa cells (Fig. 6). Although our detection of endogenous Tsg101 levels was inefficient, expression from HA-tagged Tsg101 cDNA in transfected cells was highly suppressed using a Tsg101-specific siRNA that has been previously reported (7, 16). Our data demonstrate that a direct interaction between FIV Gag and endogenous Tsg101 in HeLa cells makes FIV release sensitive to dominant-negative inhibition by TSG-5', which encodes the UEV domain. Interestingly, we also observed inhibition of virus release and replication upon TSG-5' expression in feline kidney cells (CrFK), which was accompanied by a decrease in the processing of Gag p50 (Fig. 5). These observations suggest that feline Tsg101 and its interaction with the PSAP motif in FIV Gag is highly conserved in feline cells. Our biochemical assays likely underestimate the severity of the defect imposed by Tsg101 disruption, since much of the Gag that is released from cells in the presence of dominant-negative Tsg101-based inhibitors is in the form of highly defective structures that have failed to complete membrane scission (Fig. 4). This dual effect on particle release and proper virion morphogenesis and maturation likely explains the severe inhibition of virus replication imposed by stable TSG-5' expression in feline kidney cells (Fig. 5). TSG-5' expression does not appear to be toxic and can be sustained indefinitely in stably transfected CrFK cell lines. We are currently investigating whether FIV can develop resistance to TSG-5' expression in these cells. To our knowledge, this is the first report of a dominant-negative ESCRT component, or any other inhibitor of retroviral late domain function, being stably expressed in a cell line that supports retroviral replication.
In our virus release assays, we often observed an accumulation of FIV Gag processing intermediates or a decrease in the cellular p24 to p50 ratio relative to uninhibited virus controls in the presence of virus release inhibitors (Fig. 3), especially Vps4A(E228Q), and the effect was more pronounced in CrFK cells (Fig. 5). Inhibition of HIV-1 release in the presence of Alix-V also led to a decrease in the ratio of cellular Gag p24 to p55 (Fig. 7), which is consistent with our previous report (44). Similar effects on Gag processing through manipulation of endogenous ESCRT machinery have been found in other studies (9, 14, 21, 22, 42). These observations are also consistent with an inhibition of virus release, because the maturation of particles through the activation of protease and cleavage of the Gag precursor protein occur during or shortly after particle release.
In our virus release assays, FIV release efficiency appeared to be less inhibited in CrFK cells than in HeLa cells when either TSG-5' or TSG-3' was expressed, relative to controls. The reason for this is not entirely clear, because our EM data suggest a defect in virus release under the same conditions in CrFK cells. A higher percentage of total FIV Gag was found in the supernatant of transfected CrFK cells compared to HeLa cells, suggesting a higher baseline of virus release efficiency that may be more difficult to inhibit. Similarly, release of HIV-1 from 293T cells and most T-cell lines is also more efficient than transfected HeLa cells, as suggested by less accumulation of cellular p24 and a higher proportion of released Gag, and is less sensitive to mutation of the PTAP late domain (15). Furthermore, the sensitivity of infectious HIV-1 release to TSG-5' or TSG-3' expression in these cell lines has not yet been reported. Expression of either construct in CrFK, and their expected cellular localization compared to transfected HeLa cells, appeared to be similar as determined by immunofluorescence microscopy, including the formation of TSG-3'-induced cellular structures (22, 27). Our EM images did suggest that vesicles or extracellular membrane-associated debris containing incompletely assembled or defective virus particles are possibly being released from CrFK cells into the medium. Any extracellular membrane containing Gag that is not removed by filtration can potentially be concentrated by ultracentrifugation and detected by anti-FIVp24 immunoprecipitation as virion-associated Gag. We are currently developing FIV infectivity assays to address this issue.
We and others have recently reported that both EIAV and HIV-1 are highly sensitive to the expression of a dominant-negative fragment of Alix (Alix-V) containing only the Gag-binding V domain (18, 33, 44). In contrast, the C terminus of FIV Gag did not interact with Alix-V in vitro, and FIV release was completely insensitive to Alix-V expression. We also found that RNA interference-mediated knockdown of Alix had no effect on FIV release in HeLa cells (unpublished results). Site-directed mutagenesis of the LLDL motif at the C terminus of FIV Gag to ALDS had no effect on virus release, in contrast to a previous report using the same mutation in another molecular clone (FIV-14), which encodes the same Petaluma isolate of FIV used in our study (38). We confirmed our result in several independent experiments using two different FIV expression vectors in both HeLa and CrFK cells. Mutation of the LLDL domain in Gag to QSGS also had no effect on virus release in feline cells but did inhibit virus replication (our unpublished results). Thus, it seems unlikely that the LLDL motif in FIV Gag is a late domain. Rather, we hypothesize that this sequence may serve another function; for example, based on sequence similarities with known clathrin-binding cellular proteins, it may be a clathrin-binding motif. This possibility is currently under investigation.
Despite the low level of sequence conservation between FIV and HIV-1, there have been numerous observed similarities between FIV and HIV-1 in terms of pathogenesis and virus biology in both feline and human cells. Identification of cellular mechanisms that are either shared or highly divergent between FIV and HIV-1 has profound implications for the relevance of domestic cats as a nonprimate model for AIDS and for the molecular requirements for efficient long-term gene expression from nonpathogenic FIV gene therapy vectors in human cells. In terms of the relationship between cellular ESCRT proteins and retroviral late domains, the data presented here illustrate a high degree of conservation between FIV and HIV-1 in both human and feline cells in their requirement for an interaction with Tsg101. In contrast to HIV-1, our data suggest that Alix is not likely to be involved in FIV release in human cells. A feline homolog of Alix has been identified in the domestic cat genome, although the cDNA sequence of the homologous Gag-binding V domain has not yet been determined. It remains formally possible that feline Alix may interact with FIV Gag by using an unidentified late domain. Nevertheless, such an interaction may only be required for FIV release and replication in specific cell types, such as feline lymphocytes, in conjunction with PSAP late domain function and Tsg101.
This study represents the first step in defining host cell machinery required for FIV assembly and release. Further studies will expand on the cell biology of FIV replication.
This research was supported by the Intramural Research Program of the Center for Cancer Research, National Cancer Institute, NIH, and by the Intramural AIDS Targeted Antiviral Program and was funded in part with federal funds from the National Cancer Institute, NIH, under contract N01-CO-12400.
The content of this publication does not necessarily reflect the views or policies of the U.S. Department of Health and Human Services, nor does mention of trade names, commercial products, or organizations imply endorsement by the U.S. Government.
Published ahead of print on 19 December 2007. ![]()
Present address: Department of Medicine, Monash University, Alfred Campus, 85 Commerical Rd., Prahran 3181, Victoria, Australia. ![]()
Present address: Institute of Molecular Virology, Von Esmarch Str. 56, 48149 Muenster, Germany. ![]()
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