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Journal of Virology, May 2008, p. 5054-5067, Vol. 82, No. 10
0022-538X/08/$08.00+0 doi:10.1128/JVI.02174-07
Copyright © 2008, American Society for Microbiology. All Rights Reserved.

Departments of Pediatrics,1 Cell Biology, University of Alabama School of Medicine, Birmingham, Alabama 35233,2 The Vaccine and Gene Therapy Institute, Oregon Health Sciences University, Portland, Oregon 97239,3 Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington4
Received 4 October 2007/ Accepted 28 February 2008
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The UL97 protein kinase in HCMV is particularly important because of its relevance to antiviral therapy. This enzyme phosphorylates and activates the antiviral drug ganciclovir, which is the treatment of choice for HCMV infections (44, 63). Although this drug is effective in treating HCMV infections, its toxicity limits its use in clinics and new drugs are required. This requirement led to the development of maribavir (MBV), which is a potent and selective inhibitor of UL97 protein kinase activity (6). This drug is active both in vitro and in vivo (35, 69) and is well tolerated in human subjects (45).
The UL97 kinase is a tegument protein expressed with early/late kinetics (52, 64); the protein autophosphorylates amino-terminal serine and threonine residues (23). A recombinant virus with a large deletion in UL97 replicates poorly, and virus titers are reduced 100-fold in confluent cells, suggesting that UL97 plays a critical role in the replication of the virus (59). Many defects have previously been described for the nuclei of cells infected with the null mutant, and these defects include modestly reduced DNA synthesis, inefficient DNA packaging (70), and impaired nuclear egress (38, 70). The recruitment of pUL97 by the cellular p32 protein to the lamin B receptor results in the redistribution of components of the nuclear lamina by a mechanism that requires its kinase activity (48). Virion morphogenesis in the nucleus also appears to be significantly impaired, resulting in the inappropriate aggregation and sequestration of viral proteins in the nucleus (58). This result was reproduced in a transient system in which the UL97 kinase inhibited the aggregation of pp65 in a kinase-dependent manner. It is possible that the phosphorylation of pp65 may mediate this effect, or it may result from the physical interaction of the two proteins during viral infection (32). Which among these defects is responsible for the critical deficiencies in viral replication is unclear, but all of them likely contribute to the poor-growth phenotype.
Investigations of the nature of nuclear aggregates presented here suggest that they are related to cellular structures called nuclear aggresomes. Aggresomes sequester inappropriately folded proteins in a dynamic manner, and the formation of these aggresomes is linked to pathogenic processes in aggregative diseases, such as Huntington's and other ataxias (reviewed in references 19 and 72). Many prion and viral proteins are also targeted to these structures, and it has previously been suggested that they may be sites for viral assembly and replication for some viruses (68). The cellular protein green fluorescent protein (GFP)-GCP170* is a marker for aggresomes and has previously been used as a tool to characterize their formation, which starts with the accumulation of small aggregates associated with promyelocytic leukemia (PML) bodies (nuclear bodies, ND10 sites, and promyelocytic oncogenic domains) (18). The aggregates then coalesce to form large aggresomes, and the coalescence results in the spatial rearrangement of PML bodies. This process is also associated with transcriptional repression, suggesting that PML bodies participate in aggresome formation (17, 18). Both PML bodies and aggresomes can be considered innate antiviral defenses, since interferons upregulate many proteins associated with these structures and the overexpression of PML inhibits the replication of many viruses, including HCMV (14, 50). Viral genomes and proteins are also recruited to PML bodies, presumably to promote viral replication (13). In HCMV, pp71 is involved in the derepression of the major immediate promoter and is dependent on its interaction with the PML-associated protein hDaxx (25, 49). In addition, IE1 directs the dispersion of PML bodies through the SUMOylation of PML (42) and the deletion of IE1 leads to a broad defect in virus delayed-early gene expression (20). The role of PML as a tumor suppressor was recently shown to involve both the p53 and retinoblastoma protein (RB) pathways and has previously been reviewed (22, 61). Of interest, RB forms stable complexes with the unphosphorylated form of PML (3) and results in increased numbers of PML bodies (15). This interaction appears to be functional, since PML increases the transcriptional repression mediated by RB (36) and the two function together to promote hematopoiesis (40). The overexpression of PML also results in senescence in primary fibroblasts in a process that appears to be mediated by RB, since papillomavirus E7, but not E6, can circumvent this event (7, 46).
Studies presented here show that pUL97 inhibits the formation of aggresomes by a kinase-dependent mechanism and that this enzyme is also required for the hyperphosphorylation of RB during viral infection. The mutation of either the lysine required for enzymatic activity or the conserved amino-terminal RB binding motif reduced the ability of the UL97 kinase to phosphorylate and stabilize RB and suggests that both of these motifs are required for the proper function of pUL97. The RB binding motifs may also play a role in the inhibition of aggresome formation, since the mutagenesis of two consensus RB binding motifs reduced the ability of the enzyme to inhibit aggresome formation.
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97) were described previously (59). MBV was obtained through the National Institute for Allergy and Infectious Diseases. Plasmids. Construction of the plasmids expressing the pp65-GFP fusion protein as well as those for the epitope-tagged version of the wild-type (wt) UL97 open reading frame (ORF) and the K355M mutation were described previously (58), as was the plasmid expressing the aggresome marker GFP-GCP170* (18). Mutations in UL97 were constructed by site-specific mutagenesis using the QuikChange II site-directed mutagenesis kit (Stratagene, La Jolla, CA) and plasmid pMP92 as a template. The C151G mutation was constructed using the primers C151G QC F (5'-CCA CGG CTT GCG CGG CCG CGA AAC TTC-3') and C151G QC R (5'-GAA GTT TCG CGG CCG CGC AAG CCG TGG-3'), the C428G mutation was produced with primers C428G QC F (5'-AGT GGA AGC TGG CGG GCA TCG ACA GCT AC-3') and C428G QC R (5'-GTA GCT GTC GAT GCC CGC CAG CTT CCA CT-3'), the C693G mutation was constructed with primers C693G QC F (5'-GCA CCA CCA GCA TAA TCG GCG AGG AGG ACC-3') and C693G QC R (5'-GGT CCT CCT CGC CGA TTA TGC TGG TGG TGC-3'), and the K355M UL97 mutant was reproduced using the primers K355M QC F (5'-TCG CTA TCG CGT GGT CAT GGT GGC GCG-3') and K355M QC R (5'-CGC GCC ACC ATG ACC ACG CGA TAG CGA-3'). Plasmids containing two or more point mutations were mutagenized sequentially with the primers listed above. The resulting plasmids pMP305 (C428G), pMP306 (C151G), pMP310 (C693G), pMP307 (K355M), and pMP313 (C151G/C428G) were sequenced to confirm the introduction of the desired point mutations and that no other mutations were present in the UL97 ORF.
Construction of recombinant viruses. The bacterial artificial chromosome (BAC) strain HB5 was reported previously (8) and was mutated using the recombineering protocols and plasmids described previously by Warming et al. (66). Briefly, a PCR was performed using a galK-containing plasmid, a UL97 galK forward primer (5'-GGC CTT ACG TGC GAC CCG CGT ATG TTC TTG CGC CTT ACG CAT CCC GAG CTC TGC GAC CTG TTG ACA ATT AAT CAT CGG CA-3'), and a UL97 galK reverse primer (5'-ATC TTG TGG CAA AAA TCG TCC TCT TTG GGC ACG TAG ACC AGC AGG TAG GAG ATA GAG AGC TCA GCA CTG TCC TGC TCC TT-3'). This PCR product was electroporated into the SW102 recombineering strain containing the pHB5 BAC and plated on selective medium containing galactose. The resulting BAC contained a galK insertion at amino acid 304 and was designated pMP290. PCR products from plasmids containing K355M, C151G, C428G, and C693G point mutations were electroporated into the bacteria containing pMP290, and galK-negative BACs were grown on selective medium containing deoxygalactose and designated pMP314, pMP295, pMP312, and pMP316, respectively. Restriction digests of all BACs were conducted to confirm that no large rearrangements had occurred, the UL97 ORFs from each of the resulting BACs were sequenced, and it was confirmed that these ORFs contained only the engineered mutations. BACs with the mutations K355M, C151G, C428G, and C693G were rescued, and the viruses were designated RC314, RC295, RC312, and RC316, respectively.
Polyacrylamide gels and Western blotting. HFF cells were infected at a multiplicity of infection (MOI) of 2 PFU/cell, and at 24 and 72 h after infection they were disrupted in 2x Laemmli buffer (Sigma-Aldrich, St. Louis, MO) and separated on 10%, 7.5%, or 5% polyacrylamide gels, depending on the size of the protein to be resolved (Bio-Rad, Hercules, CA). Separated proteins were transferred to nitrocellulose membranes (Roche Applied Science, Indianapolis, IN) in a buffer containing 28 mM Tris, 39 mM glycine, 0.0375% sodium dodecyl sulfate, and 20% methanol in a semidry transfer cell (Bio-Rad). Membranes were blocked in 1% bovine serum albumin in phosphate-buffered saline (PBS), incubated with primary antibodies overnight at 4°C, and washed extensively with PBS supplemented with 0.05% Tween 20. A secondary antibody conjugated to alkaline phosphatase (Southern Biotechnology Associates, Birmingham, AL) and CDP-Star (Roche Applied Science) was used to detect the bound primary antibody. Monoclonal antibodies used in these studies were directed against PML (H-238) (Santa Cruz Biotechnology, Santa Cruz, CA), DAXX (Upstate Cell Signaling Solutions, Temecula, CA), p53, RB, β-tubulin, CREB binding protein (Chemicon International, Temecula, CA), and both V5 and Xpress (Invitrogen, Carlsbad, CA). Rabbit antisera directed against RB phosphorylated on Ser780 (Cell Signaling Technology, Danvers, MA) were used in conjunction with ImmunoPure goat anti-rabbit immunoglobulin G horseradish peroxidase and SuperSignal West Pico chemiluminescent substrate (Pierce, Rockford IL).
Indirect immunofluorescence microscopy. Cells expressing proteins from transfected plasmids were visualized by methods published previously (58). Briefly, monolayers of COS7 or HFF cells were grown on 12-mm-diameter coverslips in 24-well plates. Transiently transfected cells were fixed for 15 min with freshly prepared 2% formaldehyde in PBS and washed two times with PBS, and membranes were permeabilized with 0.2% Triton X-100 in PBS for 15 min. Monoclonal antibodies to IE1 (63-27) and pp65 (28-19) were generously provided by Bill Britt (University of Alabama, Birmingham) and were used as culture supernatants with goat anti-mouse secondary antibodies conjugated to fluorescein isothiocyanate (FITC) or Texas Red (Southern Biotechnology). PML domains were visualized with rabbit polyclonal antisera to SP100 (Chemicon) and a FITC-conjugated goat anti-rabbit secondary antibody. In some studies, monoclonal antibodies were labeled with the Texas Red Zenon antibody labeling kit (Invitrogen).
Aggregate formation was assayed as reported previously (58). Briefly, coexpression of pp65-GFP and viral proteins in COS7 cells were confirmed by methods described above. Cells containing fluorescent nuclear pp65-GFP aggregates were scored as positive, while those without aggregates were scored as negative and at least 60 cells were evaluated on each coverslip. The expression levels of pp65-GFP in cotransfected cells were determined in 96-well plates containing COS7 cells. Each well was transfected with 100 ng of a plasmid expressing pp65-GFP and 100 ng of a second expression construct or salmon sperm DNA complexed with 0.5 µl of Lipofectamine 2000 (Invitrogen). Fluorescence of the pp65-GFP fusion protein was determined in a FluoStar Optima fluorometer (BMG Labtech, Durham, NC), with excitation and emission wavelengths of 485 and 520 nm, respectively.
Isolation of nuclear and cytoplasmic aggresomes.
Low-passage HFF cells were infected with RC
97 at a low MOI in 175-cm2 flasks, and infected cells were passaged at 7 days following infection (as plaques started to form) as well as on days 12 and 16 after infection (until 100% cytopathic effect was observed). Infected cells were dislodged with 0.25% trypsin-EDTA (Gibco, Grand Island, NY) and resuspended in a volume of 10 ml growth medium. Cells were collected by centrifugation and resuspended in PBS containing 0.6% NP-40, and nuclei were centrifuged through a cushion of Histopaque 1077 (Sigma-Aldrich) at 1,000 x g for 5 min. Nuclei were lysed in PBS supplemented with 2.5 M NaCl, and cellular DNA was degraded with 10,000 U of DNase I. An equal volume of 5 M urea was added to the nuclear lysate, and the nuclear aggresomes were collected by centrifugation at 3,500 x g for 10 min through a Histopaque cushion. Nuclear aggresomes were resuspended in PBS supplemented with 0.5% NP-40 and frozen at –80°C. Cytoplasmic aggresomes were isolated from the cytoplasmic fraction by sedimentation at 3,500 x g. The sedimented material was resuspended in a PBS buffer containing 5 M urea, and aggresomes were collected by sedimentation through a Histopaque cushion, resuspended in PBS with 0.5% NP-40, and frozen at –80°C.
Tryptic digestion of viral inclusions. HCMV inclusion bodies were denatured by the addition of urea to a final concentration of 8 M and heating to 37°C for 30 min. The sample was then diluted fourfold with 100 mM NH4HCO3 and 1 mM CaCl2. Methylated, sequencing-grade porcine trypsin (Promega, Madison, WI) was added at a substrate-to-enzyme ratio of 50:1 (mass to mass) and incubated at 37°C for 15 h. Sample cleanup was achieved by using a 1-ml solid-phase extraction C18 column (Supelco, Bellefonte, PA). The peptides were eluted from each column with 1 ml of methanol and lyophilized. The samples were reconstituted at a final concentration of 10 µg/µl in a 25 mM NH4HCO3 buffer and frozen at –20°C until analyzed.
Tandem mass spectrometric analysis of peptides. Peptide samples were analyzed by reversed-phase capillary liquid chromatography coupled directly with electrospray tandem mass spectrometers (models LCQ Duo and DecaXP; Thermo Finnigan, San Jose, CA). Chromatography was performed on a 60-cm capillary column (inside diameter, 150-µm; outside diameter, 360-µm; Polymicro Technologies, Phoenix, AZ) packed with Jupiter C18 5-µm-diameter particles (Phenomenex, Torrance, CA). A solvent gradient was used to elute the peptides by using 0.1% formic acid in water (solvent A) and 0.1% formic acid in acetonitrile (solvent B). The gradient was linear, starting with solvent A and increasing to 5% solvent B in 20 min, 5 to 70% gradient in 80 min, and 70 to 85% gradient in 45 min. The solvent flow rate was 1.8 µl/min. The capillary liquid chromatography system was coupled to an LCQ ion trap mass spectrometer (Thermo Finnigan) by using a custom-manufactured ESI interface in which no sheath gas or makeup liquid was used. The temperatures of heated capillary and electrospray voltage were 200°C and 3.0 kV, respectively. Samples were analyzed using the data-dependent tandem mass spectrometry (MS/MS) mode over the m/z range of 300 to 2,000. The three most abundant ions detected in each MS scan were selected for collision-induced dissociation.
SEQUEST analysis.
The SEQUEST algorithm was run on each of the datasets against a combined database comprised of the HCMV.fasta and the human.fasta from the National Center for Biotechnology Information. MS/MS peaks were generated by "extract_msn.exe," part of the SEQUEST software package. A peptide was considered to be a match by using a conservative criteria set developed previously by Yates and coworkers (67). Briefly, all accepted SEQUEST results were significant and had a delta Cn of
0.1. Peptides with +1 charge states were accepted if they were fully tryptic and had a cross correlation (Xcorr) of at least 1.9. Peptides with +2 charge states were accepted if they were fully tryptic or partially tryptic and had an Xcorr of at least 2.2. Peptides with +2 or +3 charge states with Xcorr values of at least 3.0 or 3.75, respectively, were accepted regardless of their tryptic states.
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TABLE 1. Effect of coexpressed viral proteins on pp65-GFP expression and aggregation in COS7 cells
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FIG. 1. UL97 reduces the number of PML domains in COS7 cells by a kinase-dependent mechanism. Cells were transfected with plasmids expressing ppUL44, IE1, pp71-V5, UL97-V5, UL97-V5 K355M, and UL97-V5, with the addition of MBV, as indicated in the figure. PML domains were visualized with a rabbit polyclonal antibody to SP100 and a FITC-conjugated secondary antibody (green staining), and examples of these sites are indicated by arrows. The expression of viral proteins was confirmed by staining with monoclonal antibodies labeled with Texas Red (red staining). All nuclei were stained with DAPI (4',6'-diamidino-2-phenylindole) (blue staining). Values shown in each panel are the average numbers of PML domains in cells expressing the viral proteins and reflect the average of at least 50 cells, with the standard deviations as shown. Control cells expressing ppUL44 contained an average of 4.7 PML domains (A), while positive control cells expressing IE1 contained significantly fewer PML domains (B). The expression of pp71 resulted in the recruitment of this protein to PML domains, but did not affect their number (C). Cells expressing UL97 also contained reduced numbers of PML domains (D) and was dependent on its kinase activity, since neither the K355M mutant nor UL97 in the presence of MBV significantly reduced their numbers (E and F).
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FIG. 2. Inhibition of pp71 and GFP-GCP170* aggregate formation by UL97 kinase. Aggregating proteins pp65-GFP, pp71-V5, and GFP-GCP170* were coexpressed in COS7 cells with epitope-tagged pUL97 and the kinase-negative K355M point mutant. Aggregates formed by GFP fusion proteins pp65-GFP (A) and GFP-GCP170* (G) were visualized directly, while pp71-V5 aggregates (D) were stained with a monoclonal antibody to the epitope tag and a FITC-conjugated secondary antibody (green staining). The expressions of epitope-tagged pUL97 and the K355M point mutant were detected with the V5 monoclonal antibody labeled with the Zenon Texas Red labeling kit (red staining). Aggregate formation by pp65-GFP was inhibited in cells that also expressed pUL97 (compare panels A and B). (C) The K355M kinase-negative form pUL97 was unable to inhibit the aggregation of pp65-GFP and was recruited to the aggregates as shown by the yellow staining in the merge panel. The aggregation of pp71 was also inhibited by pUL97 (compare panels D and E). (F) This effect was kinase dependent, since the K355M mutant was unable to reduce pp71 aggregate formation and instead was recruited to these structures, as shown in the merge panel. Aggresomes induced through the expression of a cellular marker for these structures, GFP-GCP170*, were also substantially reduced by the expression of pUL97 (compare panels G and H). (I) The inhibition of aggresome formation by pUL97 appeared to be kinase dependent, since their frequency and distribution were unaffected by the K355M mutant. Interestingly, the K355M mutant was specifically recruited to cytoplasmic aggresomes and was not recruited to nuclear aggresomes, as shown in the merge panel.
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FIG. 3. Viral proteins are recruited to aggresomes in the absence of UL97 kinase activity. Coexpression of either pp71-V5 or pUL69-V5 (red staining) with GFP-GCP170* (green staining) in COS7 cells resulted in the recruitment of viral proteins to aggresome structures. The recruitment of pp71 was apparent both in nuclear and cytoplasmic aggresomes (A, merge panel), while pUL69 was preferentially recruited to nuclear aggresomes (B, merge panel). (C) Cells infected with the UL97 K355M point mutant contained large tegument aggregates that stained with an antibody to pp65 (red staining) and recruited GFP-GCP170* (green staining) when it was expressed late in infection (white arrows). (D) Cells infected with the wt HB5 virus did not produce large aggregates, and pp65 (red staining) appeared to be uniformly distributed in the nucleus. When GFP-GCP170* (green staining) was expressed late in viral infection, it did not aggregate in the nucleus and only a few aggregates were observed in the cytoplasm.
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TABLE 2. Viral proteins identified by liquid chromatography MS/MS in cytoplasmic and nuclear aggresomes
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TABLE 3. Notable cellular proteins identified by liquid chromatography MS/MS in cytoplasmic and nuclear aggresomes
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97, where no hyperphosphorylated RB was detected either with or without MBV (Fig. 4, lanes 5 and 6). These data suggest that UL97 kinase activity is required for the inactivation of RB at early times in viral infection. Similar results were observed 72 h following infection, when cells infected with the wt virus had high levels of hyperphosphorylated RB that were significantly reduced by the addition of MBV (Fig. 4, lanes 9 and 10). Reduced levels of hyperphosphorylated RB were also observed in cells infected with the null mutant. While some hyperphosphorylated RB was observed in the null mutant at this point (Fig. 4, lanes 11 and 12), it was present at lower levels than in cells infected with the wt virus and was relatively unaffected by MBV. This result may be due to the poor condition of the cells following the high MOI of infection with the low-titer mutant virus, but it may also be due to a compensatory pathway in the mutant that is unaffected by MBV, possibly involving pp71. Nevertheless, UL97 kinase activity clearly induces the hyperphosphorylation of RB, which can be antagonized through pharmacologic inhibition or genetic inactivation. These data confirm that HCMV infection increases levels of hyperphosphorylated RB and suggest that UL97 kinase activity is required for this effect. This result was intriguing, since RB interacts directly with PML (3) and has previously been shown to increase the number of PML bodies (46).
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FIG. 4. UL97 kinase activity is required for the hyperphosphorylation of RB in infected cells. HFF cells were mock infected or infected at an MOI of 2 PFU/cell with AD169 or a UL97 null virus (UL97 ), both with (+) and without (–) the addition of MBV as shown. Cell lysates were harvested at 24 and 72 h following infection, separated on polyacrylamide gels, and transferred to polyvinylidene difluoride membranes. Shown are immunoblots, with monoclonal antibodies to the proteins indicated to the left of the figure. The accumulation of hyperphosphorylated forms of RB was reduced when the UL97 kinase was deleted or when its activity was inhibited with MBV.
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FIG. 5. RB binding motifs in pUL97. (A) Amino acid sequences of viral proteins containing LxCxE and LxCxD motifs were aligned with the motifs identified in pUL97. (B) Sequences for HCMV LxCxE (NP_040032.1), chimpanzee CMV UL97 (NP_612729), SV40 large T (NP_043127), human adenovirus E1A (ABK35030.1), human papillomavirus 16 E7, (AAD33253.1), HHV-6A U69 (NP_042962.1), HHV-6B U69 (T44214), HHV-7 U69 (YP_073809.1), HCMV pp71 (NP_040017), and HCMV LxCxD (NP_040032.1) are shown, with the consensus sequence given below.
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97 in low-MOI growth curves (data not shown), consistent with results reported by others (32). This result confirmed that the poor-growth phenotype exhibited by the RC
97 deletion mutant was due to a deficiency in kinase activity rather than to the disruption of other viral functions. The effects of four recombinant viruses containing point mutations on RB stabilization and phosphorylation were assessed by Western blot analysis using cell lysates harvested at 24 h after infection (Fig. 6). Cells infected with the wt virus appeared to stabilize RB, and this was consistent with results shown in Fig. 4, although the phosphorylated forms were not resolved in this blot. This stabilization did not occur when cells were infected with the K355M mutant, confirming that kinase activity was required. The accumulation of RB was unaffected by the C693G mutant (IxCxE), but appeared to be reduced in the C151G mutant, suggesting that this motif was involved with the stabilization of this protein. To confirm these data, the phosphorylation of RB was examined by using antisera specific for RB phosphorylated on serine 780. The phosphorylation of serine 780 appeared to be reduced in the K355M and C151G mutants relative to the wt virus and resembled levels seen in uninfected cells. These data suggest that both the conserved LxCxE RB binding motif and the kinase motif were involved in the stabilization and phosphorylation of RB. We cannot exclude the possibility that the LxCxD motif might also be involved in conjunction with the LxCxE motif, and their functions may be partially redundant. Taken together, these results are consistent with the direct interaction and phosphorylation of RB by the UL97 kinase.
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FIG. 6. Recombinant viruses with point mutations in either the LxCxE RB binding motif or the kinase motif are impaired in their abilities to stabilize and phosphorylate RB. HFF cells were infected (at an MOI of 2 PFU/cell) with the wt virus HB5 or with recombinant viruses containing the point mutations in pUL97, as shown. Cell lysates were harvested at 24 h following infection, separated on polyacrylamide gels, and transferred to nitrocellulose membranes. Shown are immunoblots, with the antibodies to the proteins indicated to the left of the figure. The accumulation of RB occurred in cells infected with HB5, but was reduced in cells infected with the K355M mutant and the C151G mutant. The phosphorylation of RB on serine 780 was determined with specific antisera. Cells infected with HB5 contained increased levels of RB phosphorylated on serine 780. Cells infected with viruses containing point mutations that abrogated UL97 kinase activity (K355M) or disrupted the LxCxE motif (C151G) exhibited reduced levels of RB phosphorylated on serine 780. The expression of IE1 confirmed that cells were infected, and tubulin (tub) was included as a loading control.
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FIG. 7. RB binding motifs in pUL97 impact the inhibition of aggresome formation. COS7 cells were transfected with plasmids expressing pp65-GFP, plasmids expressing a UL27-negative control, and plasmids expressing UL97, with the point mutations as labeled. (A) The graph depicts the percentage of cells containing visible aggregates. The values shown are the averages of six separate experiments, with the standard deviations (error bars) shown; the exception was the double mutant, for which values were determined twice. (B) Recombinant viruses with mutations in the UL97 kinase domain or the RB binding domains also form large aggregates. Viruses with point mutations in the amino acids shown were used to infect confluent HFF cells and were harvested 8 days following infection. Shown are fluorescent phase-contrast images of infected cells stained with an antibody to pp65 (green) to confirm viral infection.
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97 or in cells infected with the wt virus when kinase activity was inhibited by MBV and suggested that the UL97 kinase was required for the hyperphosphorylation of RB. The mutation of either the conserved LxCxE RB binding motif or the essential lysine in the kinase motif impaired the ability of the virus to stabilize and phosphorylate RB. These mutations also appeared to impact the ability of the kinase to inhibit aggresome formation. These data link the stabilization and phosphorylation of RB induced by the viral kinase with the disruption of PML domains and the inhibition of aggresome formation in infected cells. The reduction of nuclear aggresome formation in infected cells by the UL97 kinase is strongly supported by experiments demonstrating their appearance in the presence of MBV or when the UL97 kinase is genetically inactivated with a K355M mutation. The recapitulation of this effect in a transient system suggested that kinase activity was sufficient to inhibit this process and proved to be a good model to study aggregation. PML domains have previously been reported to play a role in aggresome formation, and UL97 kinase appeared to disrupt these domains. However, the precise functions that PML domains perform in the establishment of nuclear aggresomes are unclear and it is possible that the effects of the UL97 kinase on PML bodies are indirect and only tangentially related to the formation of aggresomes. The mechanism by which RB stimulates PML domain formation is also incompletely understood. Nevertheless, RB is physically associated with PML and has previously been shown to promote the formation of PML domains, suggesting a plausible mechanism that requires additional investigation. The UL97 kinase and specific inhibitors of its activity will be valuable tools in this regard and promise to provide new insights on the formation of PML domains and their relationship to nuclear aggresomes. This promise is particularly important, since elucidating mechanisms that inhibit aggregate formation will improve our understanding of this process. The identification of specific proteins and pathways affected by the UL97 kinase may reveal new pathways and targets for the treatment of aggregative diseases.
Aggresomes have been suggested to be sites of virion assembly for some viruses (68). Here, we demonstrate that considerable quantities of viral proteins are sequestered in nuclear aggresomes in the absence of kinase activity, which appears to reduce the efficiency of virion morphogenesis. We presume that it negatively impacts HCMV infection, since the virus specifically inhibits aggregation. PML domains have also been proposed to specifically recognize and isolate highly ordered proteins, such as virion proteins, and many viruses disrupt these structures (11, 18, 26). Thus, both PML domains and nuclear aggresomes can be thought of as innate antiviral defenses that inhibit viral assembly through the sequestration of viral proteins. The pp65 tegument protein appears to be particularly susceptible to this defense, since it is efficiently sequestered when expressed transiently and aggresomes are not induced efficiently in viruses that lack this protein (58). It is possible that pp65 promotes the formation of aggresomes and that the UL97 kinase can prevent this from occurring by phosphorylation or through a direct interaction that was described recently (32). Results presented here represent a clear example of the specific sequestration of viral proteins in nuclear aggresomes by the cell and how the virus circumvents this defense by eliminating these defensive structures.
The ability of UL97 kinase to induce the hyperphosphorylation and stabilization of RB in the context of a viral infection is intriguing. The dual approach of genetic inactivation and pharmacologic inhibition of the UL97 kinase yielded independent and consistent results in support of the conclusion that the UL97 kinase is required for the hyperphosphorylation of RB in viral infection. The identification of three consensus RB binding motifs in the UL97 kinase raised the possibility that this protein may phosphorylate RB directly. Subsequent experiments with recombinant viruses containing point mutations disrupting either the conserved LxCxE motif or the lysine required for enzymatic activity showed that these viruses were impaired in their abilities to stabilize and phosphorylate RB. These results are certainly consistent with the idea that the UL97 kinase might phosphorylate RB directly; however, studies presented here provide no direct evidence that UL97 interacts with RB directly. Additional experiments will be required to test this hypothesis.
The UL97 kinase is the third CMV gene product reported to affect the RB pocket proteins. The pp71 tegument protein directs the proteasome-dependent, ubiquitin-independent degradation of active unphosphorylated RB, but its effect during infection is unclear (31). IE1 was shown to interact with the RB-related p107 pocket protein in the context of viral infection and relieved E2F transcriptional repression but did not interact with RB (31, 56). IE1 interacts with the amino-terminal portion of p107, and this interaction can alleviate inhibition of cyclin E/cdk2 (29, 71). It has also been reported to possess kinase activity and to phosphorylate the RB-related pocket proteins p107 and p130, but not RB (55). Here we report that the UL97 kinase is required for the hyperphosphorylation and stabilization of RB in viral infection, which is distinct from the activities reported for IE1 and pp71. The inactivation of RB by the UL97 kinase should result in a host of downstream effects. The dispersion of PML domains and inhibition of aggresome formation may be related to the impairment of RB function, but whether this is a direct effect is not yet clear.
It is interesting that IE1, pp71, and pUL97 appear to affect similar cellular processes, yet they impact them in different ways. Both IE1 and pUL97 reduce the number of PML domains, while pp71 is recruited to them. Similarly, IE1 and pp71 stimulate the formation of aggresomes, while pUL97 reduces their numbers. It is notable, however, that pp71, IE1, and the UL97 kinase all affect RB family members, and each of them also affects aggresome formation. These results seem to support the link between the pocket proteins and aggregation, but the exact mechanism remains to be elucidated.
Studies presented here describe an important thread in the complex phenotype observed in the absence of UL97 kinase activity. The extensive morphological changes that occur in infected cells in the absence of the UL97 kinase confirm that it exerts a powerful influence on the cell and on viral infection. The hyperphosphorylation of RB induced by the UL97 kinase is entirely consistent with its profound impact on the cell. Based on the data presented here, we propose a model in which the UL97 kinase interacts directly with RB through its consensus RB binding domains (Fig. 8). This interaction could facilitate the direct phosphorylation and inactivation of RB by the UL97 kinase, resulting in a cascade of downstream effects, including changes in PML domains and the inhibition of nuclear aggresome formation. This model also predicts that the UL97 kinase promotes the disassociation of RB and E2F, resulting in the stimulation of E2F responsive promoters. This interpretation of the data is consistent with several notable aspects of the UL97 phenotype and would explain why UL97 null mutants replicate better in dividing cells (59) and why some cellular kinase inhibitors can enhance the activity of this drug (9, 24).
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FIG. 8. Model of the effect of pUL97 on RB phosphorylation and aggresome formation. In uninfected cells, RB interacts with E2F and PML and promotes the formation of PML domains and aggresomes. In cells infected with HCMV, UL97 kinase phosphorylates RB, which leads to the dissociation of E2F and PML and impairs the ability of the cell to sequester viral proteins in aggresomes.
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These studies were supported by Public Health Service contract NO1-AI-30049 from the NIAID, NIH, and a grant from the Research Institute of the Alabama Children's Hospital Foundation (M.N.P). D.N.S. was supported by an NIH grant (HL083194) and an AHA Scientist Development grant. We also thank the NIH National Center for Research Resources (RR18522) and the Environmental Molecular Science Laboratory (a U.S. Department of Energy user facility located at the Pacific Northwest National Laboratory) for support of portions of this research. The Pacific Northwest National Laboratory is operated by the Battelle Memorial Institute for the U.S. Department of Energy under contract DE-AC06-76RLO-1830. This work was also supported by an NIH grant from NINDS (NS51422) to E.S.
Published ahead of print on 5 March 2008. ![]()
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. J. Virol. 77:2359-2368.
is hyperphosphorylated by the protein kinase encoded by the UL13 gene of herpes simplex virus 1. J. Virol. 72:1731-1736.This article has been cited by other articles:
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