Previous Article | Next Article 
Journal of Virology, December 2007, p. 13235-13241, Vol. 81, No. 23
0022-538X/07/$08.00+0 doi:10.1128/JVI.00204-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
Identification of an APOBEC3G Binding Site in Human Immunodeficiency Virus Type 1 Vif and Inhibitors of Vif-APOBEC3G Binding
Andrew Mehle,1,2
Heather Wilson,1,2
Chengsheng Zhang,1,2
Andrew Jay Brazier,1,2
Mark McPike,1,2
Erez Pery,1,2 and
Dana Gabuzda1,3*
Department of Cancer Immunology and AIDS, Dana Farber Cancer Institute, Boston, Massachusetts 02115,1
Departments of Pathology,2
Neurology, Harvard Medical School, Boston, Massachusetts 021153
Received 29 January 2007/
Accepted 11 September 2007

ABSTRACT
The APOBEC3 cytidine deaminases are potent antiviral factors
that restrict replication of human immunodeficiency virus type
1 (HIV-1). HIV-1 Vif binds APOBEC3G and APOBEC3F and targets
these proteins for ubiquitination by forming an E3 ubiquitin
ligase with cullin 5 and elongins B and C. The N-terminal region
of Vif is required for APOBEC3G binding, but the binding site(s)
is unknown. To identify the APOBEC3G binding site in Vif, we
established a scalable binding assay in a format compatible
with development of high-throughput screens. In vitro binding
assays using recombinant proteins identified Vif peptides and
monoclonal antibodies that inhibit Vif-APOBEC3G binding and
suggested involvement of Vif residues 33 to 83 in APOBEC3G binding.
Cell-based binding assays confirmed these results and demonstrated
that residues 40 to 71 in the N terminus of Vif contain a nonlinear
binding site for APOBEC3G. Mutation of the highly conserved
residues His42/43 but not other charged residues in this region
inhibited Vif-APOBEC3G binding, Vif-mediated degradation of
APOBEC3G, and viral infectivity. In contrast, mutation of these
residues had no significant effect on Vif binding and degradation
of APOBEC3F, suggesting a differential requirement for His42/43
in Vif binding to APOBEC3G and APOBEC3F. These results identify
a nonlinear APOBEC3 binding site in the N terminus of Vif and
demonstrate that peptides or antibodies directed against this
region can inhibit Vif-APOBEC3G binding, validating the Vif-APOBEC3
interface as a potential drug target.

TEXT
The human immunodeficiency virus type 1 (HIV-1) Vif protein
is required during virus replication to overcome the antiviral
activity of the cytidine deaminases APOBEC3G and APOBEC3F. In
the absence of Vif, APOBEC3G and APOBEC3F are packaged into
HIV-1 virions and deaminate cytidines in viral minus-strand
DNA during reverse transcription, resulting in G-to-A hypermutation
and premature degradation of newly synthesized viral DNA (
7,
14,
16,
41). APOBEC3G and APOBEC3F are associated with high-molecular-weight
ribonucleoprotein complexes in the cytoplasm, possibly localizing
to P bodies and stress granules (
3,
6,
12,
36), and may also
inhibit viral replication via deamination-independent mechanisms
(
1,
8,
22,
29). Vif neutralizes the antiviral activity of APOBEC3G
and APOBEC3F predominantly by forming an E3 ubiquitin ligase
with cullin 5 (Cul5), elongin B (EloB), and elongin C (EloC)
that targets these proteins for degradation by the ubiquitin-proteasome
pathway (
4,
13,
18-
20,
27,
33,
38,
39). Vif may also inhibit
APOBEC3 activity through mechanisms independent of proteasomal
degradation (
10,
11,
20,
24,
33). Vif associates with the Cul5-EloB-EloC
complex by binding directly to EloC via a BC box motif at positions
144 to 153 and to Cul5 via hydrophobic residues at positions
120, 123, and 124 within a zinc-binding region (residues 100
to 142) formed by a conserved H-X
5-C-X
17-18C-X
3-5-H (HCCH) motif
(
19,
21). Binding of Vif to APOBEC3G and APOBEC3F is essential
for their degradation by the Vif-Cul5 E3 ligase (
18). The Vif-APOBEC3G
interaction is species specific; HIV-1 Vif binds to and inactivates
human APOBEC3G and APOBEC3F but not APOBEC3 proteins derived
from African green monkeys (AGM) and rhesus macaques (
2,
15,
17,
25,
37). Conversely, simian immunodeficiency virus SIV(AGM)
Vif inactivates AGM and rhesus macaque but not human APOBEC3G.
A single amino acid difference in APOBEC3G, aspartic acid at
position 128 in human APOBEC3G versus lysine in AGM APOBEC3G,
controls species specificity by influencing Vif-APOBEC3G binding
(
2,
15,
25,
37). The N-terminal region of HIV-1 Vif is important
for binding and neutralization of APOBEC3G and APOBEC3F and
also contributes to species-specific recognition (
18,
26,
32,
34), but the specific binding site(s) for APOBEC3 proteins has
not been determined.
To investigate the APOBEC3G binding site in HIV-1 Vif, we performed coprecipitation experiments using full-length and truncated recombinant GST-Vif fusion proteins. Glutathione S-transferase (GST) and GST-Vif proteins (>95% pure) were purified from bacteria and incubated with lysate prepared from 293T cells expressing APOBEC3G-hemagglutinin (HA) as described previously (20). GST proteins were precipitated with glutathione-Sepharose and washed extensively, and bound proteins were detected by Western blotting (Fig. 1A, top). APOBEC3G was coprecipitated by full-length GST-Vif and GST-Vif(1-71), whereas GST-Vif(40-160) and GST-Vif(140-192) precipitated APOBEC3G at background levels similar to those of the GST control. Western blots demonstrated similar amounts of GST proteins and APOBEC3G in each sample (Fig. 1A, middle and bottom). These data suggest that Vif residues 1 to 71 are sufficient for APOBEC3G binding.
To further characterize the APOBEC3G binding site in Vif and
take initial steps toward establishing a screen for compounds
that inhibit Vif-APOBEC3G binding, we developed a scalable binding
assay in a format compatible with development of high-throughput
screens. Binding of recombinant GST-Vif to recombinant His-APOBEC3G
(Immunodiagnostics) was measured by a heterogenous time-resolved
fluorometry (TRF) assay (Delfia; Perkin-Elmer). GST or GST-Vif
(100 ng) was bound to glutathione-coated 96-well plates and
incubated with His-APOBEC3G (100 ng). Plates were washed, and
bound APOBEC3G was detected with Europium (Eu)-labeled anti-His
using a Wallac Victor II Multiplate reader. The Eu signal increased
approximately 20-fold above background levels following binding
of APOBEC3G to GST-Vif, whereas the signal obtained with GST-Vif(90-140)
was similar to that of the GST control (Fig.
1B). We next used
this assay to identify Vif monoclonal antibodies (MAbs) that
inhibit Vif-APOBEC3G binding (Fig.
1C). Competition with MAb
TG002 (NIH AIDS Reagent Program), which maps to Vif residues
34 to 47, reduced Vif-APOBEC3G binding by approximately 80%
(Fig.
1C). MAb #564 (
31) reduced Vif-APOBEC3G binding by

50%,
whereas MAbs #319 (
31) and TG001, which maps to residues 176
to 192, had no inhibitory effect. We screened overlapping Vif
peptides corresponding to the clade B consensus sequence (15-mers
at 10 µM, overlapping by 11 amino acids) (NIH AIDS Reagent
Program) for their ability to inhibit Vif-APOBEC3G binding.
Peptides P9 to P18, derived from sequences spanning Vif residues
33 to 83, decreased the Eu signal induced by Vif-APOBEC3G binding
by

40 to 80% (Fig.
1D). P15 (derived from residues 57 to 71)
was the most potent inhibitory peptide, reducing the Eu signal
to levels near background; whether its increased potency relative
to those of the other inhibitory peptides reflects enhanced
competition or an intrinsic property of this peptide (e.g.,
improved solubility and/or folding) is unclear. Peptides derived
from the central and C-terminal regions of Vif did not inhibit
Vif-APOBEC3G binding (Fig.
1D; also data not shown). Peptides
7, 8, and 31 slightly enhanced the TRF signal. The explanation
for this finding is unclear; one possibility is that these peptides
may interact with Vif and/or APOBEC3G and induce a conformational
change that enhances Vif-APOBEC3G association. These results
suggest that the N-terminal region of Vif is involved in APOBEC3G
binding.
We confirmed the TRF binding results and simplified the binding assay format by developing a homogenous time-resolved fluorescence resonance energy transfer (FRET) assay (Lance; Perkin-Elmer) using recombinant Vif and a synthetic APOBEC3G peptide. The APOBEC3G peptide sequence (residues 110 to 148) was based on modeling of the APOBEC3G sequence onto the B. subtilis cytidine deaminase (ljkt) structure (data not shown) and is predicted to be composed of two alpha-helices flanking a loop containing the D128 residue that determines species-specific Vif-APOBEC3G binding (2, 15, 25, 37). Circular dichroism spectral analysis of the APOBEC3G peptide confirmed the presence of a helical secondary structure (data not shown). Binding assays were performed according to the manufacturer's protocol using GST or GST-Vif proteins (15 nM) incubated with the biotinylated APOBEC3G peptide (500 nM) in a 384-well format. Vif and APOBEC3G were labeled with anti-GST-Eu (2 nM) and streptavidin-allophycocyanin (APC) (25 nM), respectively, and the FRET signal was measured as fluorescence emission intensity. GST-Vif binding to the APOBEC3G peptide produced a significant increase in the FRET ratio over background levels; GST-Vif(40-160) bound to the APOBEC3G peptide but less efficiently than full-length GST-Vif (Fig. 2A). The low dynamic range of this assay compared to that of the TRF assay was expected, since the FRET signal is dependent on the proximity of the Eu and APC labels and both proteins are labeled indirectly. An important advantage over the TRF assay, however, is the homogeneous format of the FRET assay, which is better suited for development of high-throughput screens. GST-Vif(1-71) bound to the APOBEC3G peptide at levels similar to those of full-length GST-Vif, providing further evidence that the APOBEC3G binding site is located within the N terminus of Vif (Fig. 2A and B). Mutation of the conserved histidines at positions 42 and 43, which are important for Vif-APOBEC3G binding (see below), disrupted GST-Vif(1-71) binding to the APOBEC3G peptide (Fig. 2B). Vif and APOBEC3G are RNA-binding proteins (5, 9, 40). We therefore investigated whether the observed binding was direct or dependent upon RNA. The efficiencies of GST-Vif-APOBEC3G peptide binding in the presence and absence of RNase A were similar (Fig. 2C), consistent with results in previous studies demonstrating that Vif binds directly to APOBEC3G (20).
To further demonstrate the specificity of binding in the FRET
assay, we performed peptide competition assays using peptides
derived from regions of Vif and APOBEC3G that were previously
shown to be important for function in vivo. Binding of Vif to
the APOBEC3G peptide was competed by P15 (residues 57 to 71).
Similar to the TRF assay, binding was inhibited by increasing
amounts of P15, whereas P7 (residues 25 to 39) and P32 (residues
125 to 139) failed to inhibit binding at the highest peptide
concentration (Fig.
2D). Peptide P7 enhanced the FRET signal,
similar to results in the TRF assay (Fig.
1D). The requirement
for a large molar excess of P15 and other Vif peptides for inhibition
in the FRET and TRF assays might be due to the fact that 15-amino-acid
(aa) peptides represent only a small fragment of the larger
region involved in APOBEC3G binding (see below). The MAb TG002
inhibited Vif-APOBEC3G binding in the FRET assay, similar to
results in the TRF assay (data not shown). Previous mutagenic
analysis of Vif showed that mutation of the conserved residues
Tyr69 and Trp70 present in P15 inhibits Vif function in H9 cells,
which express APOBEC3G endogenously (
30). A mutant P15 containing
Y69A and W70A failed to inhibit Vif-APOBEC3G binding, even at
the highest concentration tested (Fig.
2E); FRET signals with
mutant P15 were similar to those obtained in the presence of
dimethyl sulfoxide alone. Binding reactions were also performed
in the presence of a competitor APOBEC3G peptide (residues 110
to 148) lacking a biotin moiety. The nonbiotinylated APOBEC3G
peptide inhibited Vif-APOBEC3G binding, whereas the peptide
containing the D128K mutation, which impairs species-specific
Vif-APOBEC3G interactions, had weaker inhibitory activity (Fig.
2F). These data confirm the specificity of the FRET binding
assay and demonstrate that the in vitro binding assay recapitulates
physiologically relevant interactions. Together, results from
coprecipitation experiments and the TRF and FRET assays demonstrate
that the N-terminal region of Vif is required for APOBEC3G binding
and contains the binding site for APOBEC3G.
The in vitro binding assays suggested that the N-terminal region of Vif binds to APOBEC3G. Cell-based binding assays using Vif mutants have been complicated by the relative instability and/or aggregation of Vif deletion mutants, possibly due to improper folding (18). To identify the N-terminal region(s) of Vif required for APOBEC3G binding in cells, we prepared a series of red fluorescent protein (RFP) fusion proteins (Fig. 3), since this approach was expected to improve the stability of Vif deletion mutants. Vif fragments were fused to the C terminus of monomeric RFP (28) and coexpressed in 293T cells with APOBEC3G-HA. RFP-Vif fusion proteins demonstrating a punctate expression pattern by fluorescence microscopy [i.e., RFP-Vif(1-109)], indicative of protein aggregation, were excluded from further analysis (data not shown). Cells were transfected with identical amounts of each RFP-Vif plasmid; differences in expression levels (Fig. 3A) might therefore result from intrinsic differences in protein folding or stability (data not shown). APOBEC3G was immunoprecipitated with anti-HA (Roche), and coprecipitating RFP-Vif fusions were detected by Western blotting with anti-RFP (Stratagene). RFP-Vif(1-71) was coprecipitated by APOBEC3G, suggesting that Vif residues 1 to 71 are sufficient for APOBEC3G binding (Fig. 3A). In contrast, residues 84 to 109 failed to coprecipitate with APOBEC3G despite high levels of expression detected by Western blotting. RFP alone did not bind APOBEC3G. A minimal fragment containing Vif residues 54 to 71 bound APOBEC3G, but Vif-APOBEC3G binding was enhanced by the presence of flanking residues based on the levels of coprecipitated full-length RFP-Vif, RFP-Vif(54-71), RFP-Vif(40-71), and RFP-Vif(54-109) compared to their relative expression in cell lysate (Fig. 3A; also data not shown). RFP-Vif(40-71) was more efficiently coprecipitated by APOBEC3G than RFP-Vif(54-71), even though RFP-Vif(54-71) was expressed at higher levels. Binding assays with full-length GST-Vif and GST-Vif(40-160) proteins suggested that Vif residues 1 to 40 are important for APOBEC3G binding (Fig. 1A) (20). In contrast, results from cell-based binding assays (Fig. 3) suggested these residues are dispensable for APOBEC3G binding by RFP-Vif fusion proteins, consistent with results of the peptide inhibition studies (Fig. 1D). This discrepancy, which might result from the use of different fusion tags and/or intrinsic differences in protein folding or differences between cell-based and in vitro assays, raises the possibility that residues upstream of position 40 might contribute to APOBEC3G binding. Nonetheless, binding experiments using RFP-Vif fusions suggest that amino acids 40 to 71 comprise the major region in Vif important for APOBEC3G binding in cells (Fig. 3B).
We next used Vif point mutants to investigate the Vif-APOBEC3G
interaction and determine functional consequences of binding
mutations on the anti-APOBEC3 activity of Vif. The charged residue
at position 128 in human APOBEC3G regulates species-specific
interaction with Vif, suggesting the presence of a complementary
charge on Vif (
25). Therefore, we analyzed the importance of
conserved charged residues in the N-terminal region of Vif for
APOBEC3G degradation (Fig.
4A). Vif and APOBEC3G-HA were coexpressed
in 293T cells, and the ability of Vif to induce APOBEC3G degradation
was determined by Western blotting of cell lysate. Mutation
of the histidines at positions 42 and 43, which are conserved
in >99% of HIV-1 Vif sequences, prevented Vif-mediated degradation
of APOBEC3G; APOBEC3G levels were similar to those present in
the absence of Vif. Notably, these residues are located within
the APOBEC3G binding region and the inhibitory peptide P9 identified
in the preceding experiments. Furthermore, histidine 43 was
previously identified as being important for Vif function during
virus production in H9 cells (
30). Mutation of the conserved
histidines at positions 27 and 28 resulted in only a minor reduction
in Vif-mediated degradation of APOBEC3G, whereas mutation of
other charged residues within the N terminus, R36, R50, R56,
D61, and R63, had no significant effect. Residue I9 has been
suggested to be important for APOBEC3G binding based on results
obtained with YFP-Vif fusions (
35). However, in the context
of Vif alone, the I9A mutant functioned similar to the wild
type for Vif-mediated degradation of APOBEC3G (Fig.
4A).
To confirm the biological relevance of these observations, we
tested the ability of mutant Vif proteins to support the production
of infectious virus in the presence of APOBEC3G. Vif H42/43N
was severely impaired for the production of infectious HIV-1
(Fig.
4B), consistent with the reduced capacity of this mutant
to induce APOBEC3G degradation (Fig.
4A). In contrast, Vif H27/28N
supported the production of infectious virus at levels near
those of wild-type Vif. Coprecipitation experiments demonstrated
that Vif H42/43N is defective for APOBEC3G binding (Fig.
4C),
suggesting that decreased Vif-APOBEC3G binding is responsible
for the reduced capacity to enhance viral infectivity. Vif H42/43N
retained the ability to bind to EloB, EloC, and Cul5, suggesting
that the loss of APOBEC3G binding did not result from a global
defect in protein folding (Fig.
4D). Finally, we tested whether
His42/43 were important for APOBEC3F binding and degradation.
Analysis of naturally occurring Vif variants demonstrated the
differential requirement for certain residues to overcome APOBEC3G
versus APOBEC3F (
32). Vif H42/43N bound to and induced degradation
of APOBEC3F at levels similar to those of wild-type Vif (Fig.
4E and F), indicating that these residues are not important
for APOBEC3F binding or degradation. These results are in agreement
with those recently reported by Russell and Pathak, which demonstrated
a requirement for Vif residues 40 to 44 (and the importance
of the individual histidine residues at positions 42/43) to
counteract APOBEC3G but not APOBEC3F (
23). Together, these data
suggest that H42/43 are selectively required for counteracting
APOBEC3G but not APOBEC3F.
In summary, we demonstrated that residues 40 to 71 in the N terminus of Vif contain a nonlinear binding site for APOBEC3G. Vif residues 54 to 71 are sufficient for APOBEC3G binding, but amino acids 40 to 71 bind APOBEC3G more efficiently and His42/43 are important for Vif-APOBEC3G binding and Vif-mediated APOBEC3G degradation in vivo. Functional analysis of Vif variants isolated from patients demonstrated that mutations within the APOBEC3G binding region (Y40H and E45G) compromise the ability of Vif to overcome APOBEC3G (32). These data from patient isolates suggest that the region we identified as important for APOBEC3G binding is likely to be important for HIV replication in vivo, but they do not exclude possible involvement of other regions of Vif in binding to APOBEC3 proteins. For example, RFP-Vif(54-71) and RFP-Vif(54-109) bound to APOBEC3G in cells (Fig. 3A) even though they lack His42/43, which appear to be important for APOBEC3G binding by full-length Vif (without RFP) in cells (Fig. 4A). The conserved tryptophan residues at positions 11 and 79 are important for Vif-mediated suppression of APOBEC3F but not APOBEC3G. In addition, residues 14 to 17 (DRMR), which are not essential for Vif binding to APOBEC3G, facilitate species-specific recognition of APOBEC3G (23, 26). Together these results suggest that the N terminus of Vif contains a nonlinear structure that forms the APOBEC3 protein binding site and binds to APOBEC3G and APOBEC3F through distinct interfaces (23, 25, 34). Vif may function like a molecular scaffold, since it contains at least four sites that mediate protein-protein interactions—Vif-APOBEC3G (Fig. 1 to 4) (23), Vif-APOBEC3F (23, 34), Vif-EloC (19, 39), and Vif-Cul5 (21). The APOBEC3G and APOBEC3F binding sites likely overlap. Importantly, results from the Vif-APOBEC3G TRF and FRET binding assays establish a format for high-throughput screens to identify small-molecule inhibitors that disrupt this critical interaction and validate the Vif-APOBEC3 interface as a potential drug target.

ACKNOWLEDGMENTS
We thank M. Malim and K. Strebel for reagents and R. Ptak and
M. Glicksman for helpful advice. Vif monoclonal antibodies,
peptides, and 293/APOBEC3G cells were obtained from the AIDS
Research and Reference Reagent Program (donated by M. Malim,
Transgene, and NIAID).
A.M. was supported in part by an NSF Predoctoral Fellowship. This work was supported by NIH grants AI67032 and AI62555. Core facilities were supported by Harvard Center for AIDS Research (CFAR) and DF/HCC Cancer Center grants.

FOOTNOTES
* Corresponding author. Mailing address: Dana-Farber Cancer Institute, JF816, 44 Binney St., Boston, MA 02115. Phone: (617) 632-2154. Fax: (617) 632-3113. E-mail:
dana_gabuzda{at}dfci.harvard.edu 
Published ahead of print on 26 September 2007. 

REFERENCES
1 - Bishop, K. N., R. K. Holmes, and M. H. Malim. 2006. Antiviral potency of APOBEC proteins does not correlate with cytidine deamination. J. Virol. 80:8450-8458.[Abstract/Free Full Text]
2 - Bogerd, H. P., B. P. Doehle, H. L. Wiegand, and B. R. Cullen. 2004. A single amino acid difference in the host APOBEC3G protein controls the primate species specificity of HIV type 1 virion infectivity factor. Proc. Natl. Acad. Sci. USA 101:3770-3774.[Abstract/Free Full Text]
3 - Chiu, Y. L., V. B. Soros, J. F. Kreisberg, K. Stopak, W. Yonemoto, and W. C. Greene. 2005. Cellular APOBEC3G restricts HIV-1 infection in resting CD4+ T cells. Nature 435:108-114.[CrossRef][Medline]
4 - Conticello, S. G., R. S. Harris, and M. S. Neuberger. 2003. The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G. Curr. Biol. 13:2009-2013.[CrossRef][Medline]
5 - Dettenhofer, M., S. Cen, B. A. Carlson, L. Kleiman, and X. F. Yu. 2000. Association of human immunodeficiency virus type 1 Vif with RNA and its role in reverse transcription. J. Virol. 74:8938-8945.[Abstract/Free Full Text]
6 - Gallois-Montbrun, S., B. Kramer, C. M. Swanson, H. Byers, S. Lynham, M. Ward, and M. H. Malim. 2007. Antiviral protein APOBEC3G localizes to ribonucleoprotein complexes found in P bodies and stress granules. J. Virol. 81:2165-2178.[Abstract/Free Full Text]
7 - Harris, R. S., K. N. Bishop, A. M. Sheehy, H. M. Craig, S. K. Petersen-Mahrt, I. N. Watt, M. S. Neuberger, and M. H. Malim. 2003. DNA deamination mediates innate immunity to retroviral infection. Cell 113:803-809.[CrossRef][Medline]
8 - Holmes, R. K., F. A. Koning, K. N. Bishop, and M. H. Malim. 2007. APOBEC3F can inhibit the accumulation of HIV-1 reverse transcription products in the absence of hypermutation: comparisons with APOBEC3G. J. Biol. Chem. 282:2587-2595.[Abstract/Free Full Text]
9 - Jarmuz, A., A. Chester, J. Bayliss, J. Gisbourne, I. Dunham, J. Scott, and N. Navaratnam. 2002. An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22. Genomics 79:285-296.[CrossRef][Medline]
10 - Kao, S., M. A. Khan, E. Miyagi, R. Plishka, A. Buckler-White, and K. Strebel. 2003. The human immunodeficiency virus type 1 Vif protein reduces intracellular expression and inhibits packaging of APOBEC3G (CEM15), a cellular inhibitor of virus infectivity. J. Virol. 77:11398-11407.[Abstract/Free Full Text]
11 - Kao, S., E. Miyagi, M. A. Khan, H. Takeuchi, S. Opi, R. Goila-Gaur, and K. Strebel. 2004. Production of infectious human immunodeficiency virus type 1 does not require depletion of APOBEC3G from virus-producing cells. Retrovirology 1:27.[CrossRef][Medline]
12 - Kozak, S. L., M. Marin, K. M. Rose, C. Bystrom, and D. Kabat. 2006. The anti-HIV-1 editing enzyme APOBEC3G binds HIV-1 RNA and messenger RNAs that shuttle between polysomes and stress granules. J. Biol. Chem. 281:29105-29119.[Abstract/Free Full Text]
13 - Liu, B., P. T. Sarkis, K. Luo, Y. Yu, and X. F. Yu. 2005. Regulation of Apobec3F and human immunodeficiency virus type 1 Vif by Vif-Cul5-ElonB/C E3 ubiquitin ligase. J. Virol. 79:9579-9587.[Abstract/Free Full Text]
14 - Mangeat, B., P. Turelli, G. Caron, M. Friedli, L. Perrin, and D. Trono. 2003. Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts. Nature 424:99-103.[CrossRef][Medline]
15 - Mangeat, B., P. Turelli, S. Liao, and D. Trono. 2004. A single amino acid determinant governs the species-specific sensitivity of APOBEC3G to Vif action. J. Biol. Chem. 279:14481-14483.[Abstract/Free Full Text]
16 - Mariani, R., D. Chen, B. Schrofelbauer, F. Navarro, R. Konig, B. Bollman, C. Munk, H. Nymark-McMahon, and N. R. Landau. 2003. Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif. Cell 114:21-31.[CrossRef][Medline]
17 - Mariani, R., G. Rutter, M. E. Harris, T. J. Hope, H. G. Krausslich, and N. R. Landau. 2000. A block to human immunodeficiency virus type 1 assembly in murine cells. J. Virol. 74:3859-3870.[Abstract/Free Full Text]
18 - Marin, M., K. M. Rose, S. L. Kozak, and D. Kabat. 2003. HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation. Nat. Med. 9:1398-1403.[CrossRef][Medline]
19 - Mehle, A., J. Goncalves, M. Santa-Marta, M. McPike, and D. Gabuzda. 2004. Phosphorylation of a novel SOCS-box regulates assembly of the HIV-1 Vif-Cul5 complex that promotes APOBEC3G degradation. Genes Dev. 18:2861-2866.[Abstract/Free Full Text]
20 - Mehle, A., B. Strack, P. Ancuta, C. Zhang, M. McPike, and D. Gabuzda. 2004. Vif overcomes the innate antiviral activity of APOBEC3G by promoting its degradation in the ubiquitin-proteasome pathway. J. Biol. Chem. 279:7792-7798.[Abstract/Free Full Text]
21 - Mehle, A., E. R. Thomas, K. S. Rajendran, and D. Gabuzda. 2006. A zinc-binding region in Vif binds Cul5 and determines cullin selection. J. Biol. Chem. 281:17259-17265.[Abstract/Free Full Text]
22 - Newman, E. N., R. K. Holmes, H. M. Craig, K. C. Klein, J. R. Lingappa, M. H. Malim, and A. M. Sheehy. 2005. Antiviral function of APOBEC3G can be dissociated from cytidine deaminase activity. Curr. Biol. 15:166-170.[CrossRef][Medline]
23 - Russell, R. A., and V. K. Pathak. 2007. Identification of two distinct HIV-1 Vif determinants critical for interactions with human APOBEC3G and APOBEC3F. J. Virol. 81:8201-8210.[Abstract/Free Full Text]
24 - Santa-Marta, M., F. A. da Silva, A. M. Fonseca, and J. Goncalves. 2005. HIV-1 Vif can directly inhibit apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3G-mediated cytidine deamination by using a single amino acid interaction and without protein degradation. J. Biol. Chem. 280:8765-8775.[Abstract/Free Full Text]
25 - Schrofelbauer, B., D. Chen, and N. R. Landau. 2004. A single amino acid of APOBEC3G controls its species-specific interaction with virion infectivity factor (Vif). Proc. Natl. Acad. Sci. USA 101:3927-3932.[Abstract/Free Full Text]
26 - Schrofelbauer, B., T. Senger, G. Manning, and N. R. Landau. 2006. Mutational alteration of human immunodeficiency virus type 1 Vif allows for functional interaction with nonhuman primate APOBEC3G. J. Virol. 80:5984-5991.[Abstract/Free Full Text]
27 - Sheehy, A. M., N. C. Gaddis, and M. H. Malim. 2003. The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif. Nat. Med. 9:1404-1407.[CrossRef][Medline]
28 - Sherer, N. M., M. J. Lehmann, L. F. Jimenez-Soto, A. Ingmundson, S. M. Horner, G. Cicchetti, P. G. Allen, M. Pypaert, J. M. Cunningham, and W. Mothes. 2003. Visualization of retroviral replication in living cells reveals budding into multivesicular bodies. Traffic (Copenhagen) 4:785-801.[CrossRef]
29 - Shindo, K., A. Takaori-Kondo, M. Kobayashi, A. Abudu, K. Fukunaga, and T. Uchiyama. 2003. The enzymatic activity of CEM15/Apobec-3G is essential for the regulation of the infectivity of HIV-1 virion but not a sole determinant of its antiviral activity. J. Biol. Chem. 278:44412-44416.[Abstract/Free Full Text]
30 - Simon, J. H., A. M. Sheehy, E. A. Carpenter, R. A. Fouchier, and M. H. Malim. 1999. Mutational analysis of the human immunodeficiency virus type 1 Vif protein. J. Virol. 73:2675-2681.[Abstract/Free Full Text]
31 - Simon, J. H., T. E. Southerling, J. C. Peterson, B. E. Meyer, and M. H. Malim. 1995. Complementation of vif-defective human immunodeficiency virus type 1 by primate, but not nonprimate, lentivirus vif genes. J. Virol. 69:4166-4172.[Abstract]
32 - Simon, V., V. Zennou, D. Murray, Y. Huang, D. D. Ho, and P. D. Bieniasz. 2005. Natural variation in Vif: differential impact on APOBEC3G/3F and a potential role in HIV-1 diversification. PLoS Pathog. 1:e6.[CrossRef][Medline]
33 - Stopak, K., C. de Noronha, W. Yonemoto, and W. C. Greene. 2003. HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability. Mol. Cell 12:591-601.[CrossRef][Medline]
34 - Tian, C., X. Yu, W. Zhang, T. Wang, R. Xu, and X. F. Yu. 2006. Differential requirement for conserved tryptophans in human immunodeficiency virus type 1 Vif for the selective suppression of APOBEC3G and APOBEC3F. J. Virol. 80:3112-3115.[Abstract/Free Full Text]
35 - Wichroski, M. J., K. Ichiyama, and T. M. Rana. 2005. Analysis of HIV-1 viral infectivity factor-mediated proteasome-dependent depletion of APOBEC3G: correlating function and subcellular localization. J. Biol. Chem. 280:8387-8396.[Abstract/Free Full Text]
36 - Wichroski, M. J., G. B. Robb, and T. M. Rana. 2006. Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies. PLoS Pathog. 2:e41.[CrossRef][Medline]
37 - Xu, H., E. S. Svarovskaia, R. Barr, Y. Zhang, M. A. Khan, K. Strebel, and V. K. Pathak. 2004. A single amino acid substitution in human APOBEC3G antiretroviral enzyme confers resistance to HIV-1 virion infectivity factor-induced depletion. Proc. Natl. Acad. Sci. USA 101:5652-5657.[Abstract/Free Full Text]
38 - Yu, X., Y. Yu, B. Liu, K. Luo, W. Kong, P. Mao, and X. F. Yu. 2003. Induction of APOBEC3G ubiquitination and degradation by an HIV-1 Vif-Cul5-SCF complex. Science 302:1056-1060.[Abstract/Free Full Text]
39 - Yu, Y., Z. Xiao, E. S. Ehrlich, X. Yu, and X. F. Yu. 2004. Selective assembly of HIV-1 Vif-Cul5-ElonginB-ElonginC E3 ubiquitin ligase complex through a novel SOCS box and upstream cysteines. Genes Dev. 18:2867-2872.[Abstract/Free Full Text]
40 - Zhang, H., R. J. Pomerantz, G. Dornadula, and Y. Sun. 2000. Human immunodeficiency virus type 1 Vif protein is an integral component of an mRNP complex of viral RNA and could be involved in the viral RNA folding and packaging process. J. Virol. 74:8252-8261.[Abstract/Free Full Text]
41 - Zhang, H., B. Yang, R. J. Pomerantz, C. Zhang, S. C. Arunachalam, and L. Gao. 2003. The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA. Nature 424:94-98.[CrossRef][Medline]
Journal of Virology, December 2007, p. 13235-13241, Vol. 81, No. 23
0022-538X/07/$08.00+0 doi:10.1128/JVI.00204-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
This article has been cited by other articles:
-
Chen, G., He, Z., Wang, T., Xu, R., Yu, X.-F.
(2009). A Patch of Positively Charged Amino Acids Surrounding the Human Immunodeficiency Virus Type 1 Vif SLVx4Yx9Y Motif Influences Its Interaction with APOBEC3G. J. Virol.
83: 8674-8682
[Abstract]
[Full Text]
-
Henriet, S., Mercenne, G., Bernacchi, S., Paillart, J.-C., Marquet, R.
(2009). Tumultuous Relationship between the Human Immunodeficiency Virus Type 1 Viral Infectivity Factor (Vif) and the Human APOBEC-3G and APOBEC-3F Restriction Factors. Microbiol. Mol. Biol. Rev.
73: 211-232
[Abstract]
[Full Text]
-
Kataropoulou, A., Bovolenta, C., Belfiore, A., Trabatti, S., Garbelli, A., Porcellini, S., Lupo, R., Maga, G.
(2009). Mutational analysis of the HIV-1 auxiliary protein Vif identifies independent domains important for the physical and functional interaction with HIV-1 reverse transcriptase. Nucleic Acids Res
37: 3660-3669
[Abstract]
[Full Text]
-
Pery, E., Rajendran, K. S., Brazier, A. J., Gabuzda, D.
(2009). Regulation of APOBEC3 Proteins by a Novel YXXL Motif in Human Immunodeficiency Virus Type 1 Vif and Simian Immunodeficiency Virus SIVagm Vif. J. Virol.
83: 2374-2381
[Abstract]
[Full Text]
-
Russell, R. A., Smith, J., Barr, R., Bhattacharyya, D., Pathak, V. K.
(2009). Distinct Domains within APOBEC3G and APOBEC3F Interact with Separate Regions of Human Immunodeficiency Virus Type 1 Vif. J. Virol.
83: 1992-2003
[Abstract]
[Full Text]
-
Bennett, R. P., Salter, J. D., Liu, X., Wedekind, J. E., Smith, H. C.
(2008). APOBEC3G Subunits Self-associate via the C-terminal Deaminase Domain. J. Biol. Chem.
283: 33329-33336
[Abstract]
[Full Text]
-
Mulder, L. C. F., Harari, A., Simon, V.
(2008). Cytidine deamination induced HIV-1 drug resistance. Proc. Natl. Acad. Sci. USA
105: 5501-5506
[Abstract]
[Full Text]