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Journal of Virology, November 2007, p. 11560-11568, Vol. 81, No. 21
0022-538X/07/$08.00+0 doi:10.1128/JVI.00713-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

David W. Dorward,3
Brian R. Murphy,1
Siba K. Samal,2
Peter L. Collins,1 and
Alexander Bukreyev1*
Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892,1 Virginia-Maryland Regional College of Veterinary Medicine, University of Maryland, College Park, Maryland 20742,2 Rocky Mountain Labs Research Technologies Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Montana 598403
Received 3 April 2007/ Accepted 7 August 2007
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Analysis of HA mRNA and protein.
DF-1 cells were infected with NDV or NDV-HA at a multiplicity of infection of 3 PFU per cell. After 24 h the total RNA was isolated by using an RNeasy total RNA isolation kit (QIAGEN, Valencia, CA). Then, 1.5 µg of total RNA was separated on a 1.2% denaturing agarose gel, transferred to a Hybond N+ membrane (GE Healthcare Bio-Sciences Corp., Piscataway, NJ), and analyzed by Northern blot hybridization (9) with a double-stranded DNA probe prepared from a PCR product of the HA gene cDNA by using the Megaprime DNA labeling system (GE Healthcare Bio-Sciences Corp.) and [
-32P]dCTP. For protein analysis, the cells and the overlying medium were harvested at 24 h postinfection. The cells were lysed in 1x NuPAGE LDS sample loading buffer (Invitrogen, Carlsbad, CA) containing 5% (vol/vol) ß-mercaptoethanol and heated at 95°C for 10 min. The medium was clarified by low-speed centrifugation, and virus particles were purified one or two times by ultracentrifugation in a 40 to 60% (wt/wt) sucrose step gradient (26,000 rpm for 90 min in an SW28 rotor [Beckman Coulter, Fullerton, CA]). Virus was collected from the 40 to 60% sucrose interface, concentrated by centrifugation at 90,000 x g, and resuspended in NMH buffer (50 mM HEPES, 150 mM NaCl, 100 mM MgSO4 [pH 7.5]) prior to freezing or reapplication to a sucrose gradient. Virions were reduced and denatured as described above or were further analyzed in native form as follows. Cross-linking studies were done by the addition of formaldehyde to purified virions to a final concentration of 3.7%, followed by incubation at 37°C for 1 h, after which the virions were reduced and denatured. Cell lysates, purified virions, and formaldehyde-treated samples were separated on NuPAGE 10% Bis-Tris gels (Invitrogen) under denaturing and reducing conditions and then transferred to Hybond-P membranes (GE Healthcare Bio-Sciences Corp.). In addition, native NDV and NDV-HA virions were heated for 95°C for 1 h (to reduce and denature the sample without the introduction of reducing or denaturing reagents that might diffuse during electrophoresis and affect other lanes) or left untreated, mixed with NativePAGE sample buffer (Invitrogen) to a final concentration of 1% digitonin, and subjected to electrophoresis on 4 to 16% NativePAGE gels (Invitrogen) under nonreducing and nondenaturing conditions. Native gels were then transferred to Hybond P membranes as described above. Membranes from either reducing/denaturing gels or native gels were blocked in phosphate-buffered saline containing 2% (wt/vol) bovine serum albumin and 0.2% (vol/vol) Tween 20 and incubated with chicken anti-NDV serum (Charles River Laboratories, Wilmington, MA), rabbit polyclonal antibody raised against a synthetic peptide representing the H5N1 HA1 protein (Prosci, Inc., Poway, CA), or a mouse monoclonal antibody raised against recombinant HPAIV HA derived from strain A/Vietnam/1203/2004 (BEI Resources, Manassas, VA). The membranes were incubated with horseradish peroxidase-conjugated goat anti-rabbit immunoglobulin G (IgG; Kirkegaard & Perry Laboratories, Gaithersburg, MD), goat anti-mouse IgG (Kirkegaard & Perry Laboratories), or rabbit anti-chicken IgG (Jackson Immunoresearch Laboratories, Inc., West Grove, PA), developed with ECL detection reagents (GE Healthcare Bio-Sciences Corp.), and exposed to X-ray film. Densitometry was performed on undersaturated film exposures by using Kodak Molecular Imaging Software version 4.0 (Eastman Kodak Company, Rochester, NY). The virion preparations were also analyzed by silver staining of sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gels using the SilverQuest kit (Invitrogen) according to the manufacturer's recommendations.
Immunoelectron microscopy. Purified virus particles were bound to 200-mesh Formvar/carbon-coated nickel grids (Electron Microscopy Sciences, Hatfield, PA). For immunolabeling studies, grids were blocked in phosphate-buffered saline containing 2% globulin-free bovine serum albumin (Sigma-Aldrich, St. Louis, MO) and incubated with chicken anti-NDV polyclonal antiserum (Charles River Laboratories) or rabbit anti-HA polyclonal antiserum (Prosci, Inc.). Grids were washed in blocking solution and incubated in goat anti-rabbit IgG antiserum conjugated to 10-nm gold beads (Ted Pella, Inc., Redding, CA) or goat anti-chicken IgG antiserum conjugated to 6-nm gold beads (Electron Microscopy Sciences). The grids received a final wash, followed by negative staining with 1% ammonium molybdate. Grids that were not subjected to immunolabeling were stained with ammonium molybdate immediately after binding to the grid. Grids were examined under a model H7500 transmission electron microscope (Hitachi High Technologies, Schaumburg, IL) at 80 kV. All images were obtained by using an XR100 digital camera system (Advanced Microscopy Techniques, Danvers, MA).
Virological and serological assays. NDV titers were determined by plaque assay using monolayers of DF-1 cells, which were fixed with ethanol and stained with crystal violet for enumeration of plaques. HPAIV titers (50% tissue culture infectious dose units/ml) were determined on monolayers of Madin-Darby canine kidney cells. NDV-specific serum antibodies were detected by using an HAIV assay with turkey erythrocytes as previously described (2). Serum antibodies specific for HA protein were detected by IgG isotype-specific enzyme-linked immunosorbent assays (ELISAs) essentially as previously described (20). Briefly, 96-well Immulon 1B plates (Dynex Technologies, Inc., Chantilly, VA) were coated with 40 ng of baculovirus-expressed, purified HPAI H5 HA protein (Protein Sciences Corp.)/well. Fourfold serial dilutions of monkey sera were then applied to each well, starting at a dilution of 1:40. The secondary antibody utilized was rabbit anti-monkey-IgG (Kirkegaard & Perry Laboratories), followed by detection with alkaline phosphatase-conjugated goat anti-rabbit antibody (Kirkegaard & Perry Laboratories). The plates were visualized by the addition of pNPP substrate (Sigma-Aldrich), and the resultant optical density at 405 nm was recorded. The reported titer is the log2 of the reciprocal serum dilution at which the optical density was double the background and above 0.2. To detect IgA in nose/throat wash (NW) and tracheal lavage (TL) samples, the samples were concentrated (see below) and analyzed as described above for IgG with several differences. We tested twofold serial dilutions of concentrated mucosal samples, starting at a dilution of 1:2. The secondary antibody used for detection was goat anti-monkey IgA conjugated to horseradish peroxidase (Kirkegaard & Perry Laboratories). Bound antibodies were visualized by the addition of SureBlue 3,3',5,5'-tetramethylbenzidine (TMB) 1-component peroxidase substrate (Kirkegaard & Perry Laboratories), incubation for 30 min, and the addition of SureBlue TMB stop solution (Kirkegaard & Perry Laboratories). The optical density was measured at 450 nm. The titers were normalized to the total IgA content in each sample, as determined by quantitative IgA ELISA. Briefly, plates were coated with goat anti-monkey IgA (Kirkegaard & Perry Laboratories). Dilutions (1:100 or 1:300) of NW samples or TL samples were then added to each well in triplicate, followed by detection and visualization as described above. To calculate the IgA mass, the resultant optical densities from NW and TL samples were compared to a purified human IgA (Kirkegaard & Perry Laboratories) standard curve. The specificity of the assay for IgA was confirmed by a lack of reactivity of the primary antibody with purified human IgG (Kirkegaard & Perry Laboratories).
To assess the ability of NDV-specific and HPAIV-specific antibodies to neutralize NDV-HA, 250 PFU of NDV-HA or empty NDV vector were combined with serial dilutions of heat-inactivated naive African green monkey serum, NDV-immune African green monkey serum, or HPAIV strain A/Vietnam/1203/2004-immune sheep serum (kindly provided by George Kemble, Medimmune Vaccines). The virus-serum mixtures were incubated at 37°C for 1 h, and the residual NDV infectivity was assayed by titration in DF-1 cells.
Pathogenicity of NDV-HA in chickens. Mean embryo death time and pathogenicity studies were performed essentially as previously described (11, 23). Briefly, serial dilutions of virus were administered in the allantoic cavity of 9-day-old embryonated chicken eggs (five per virus). The eggs were incubated at 37°C and analyzed three times per day to assess viability. To evaluate pathogenicity in birds, 4-week-old chickens were inoculated with 5 x 104 PFU per nostril and 2 x 104 PFU per eye of NDV or NDV-HA (six animals per virus). The animals were sacrificed on day 4, and samples were taken from the lungs, liver, kidney, intestines, spleens, and brains. Tissue homogenates were prepared, and the virus content was assayed by plaque titration in DF-1 cells. These studies were performed under Animal Biosafety Level 3 conditions.
Immunization of African green monkeys.
African green monkeys (Cercopithecus aethiops), confirmed to be seronegative for NDV by HAI assay, were immunized by the intranasal and intratracheal routes with 107 PFU of NDV-HA per site as described previously (3). On day 42, the animals were inoculated with L-15 medium (Invitrogen) (one-dose group) or NDV-HA (two-dose group) as described above. To assess shedding of the vaccine, NT and TL samples were taken on days 2 and 4 after the first dose essentially as previously described (3), except that greater volumes of medium were used to improve the efficiency of detection of shed virus: 6 ml (3 ml per nostril) for NW and 30 ml for TL per animal. The vaccine virus in NW and TL samples was analyzed by titration in DF-1 cells. To analyze mucosal antibody responses, NW and TL samples were taken on days 0, 42, 56, and 70. After collection, NW and TL samples were concentrated to a final volume of
0.5 ml using Vivaspin 30,000 molecular-weight cutoff columns (Sartorius Corp., Edgewood, NY). Animals were observed for any signs of clinical symptoms throughout the course of the study. All primate experiments were performed at Bioqual, Inc. (Rockville, MD), a site approved by the Association for Assessment and Accreditation of Laboratory Care International with a protocol approved by the Animal Care and Use Committee of the National Institute of Allergy and Infectious Disease.
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FIG. 1. Genome of recombinant NDV bearing the HPAIV H5 HA coding sequence as an additional gene located between the P and M genes (NDV-HA). A cDNA of the codon-optimized HPAIV HA ORF was cloned into the P-M junction of the NDV antigenomic cDNA using XbaI sites (italicized) such that it was placed under the control of a set of NDV gene start (GS) and gene end (GE) transcription signals (underlined) directing its expression as a separate mRNA. NDV genes are shown as gray boxes, and the HPAIV HA insert is indicated as a black box. The nucleotide sequence spanning the inserted transcription cassette is shown at the top of the figure as positive-sense DNA. The single intergenic nucleotide located on either side of the inserted transcriptional unit is indicated by an arrow.
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FIG. 2. Northern blotting analysis of the HA transcripts. A portion (1.5 µg) of total intracellular RNA from cells infected with NDV or NDV-HA (as indicated) was separated on a 1.2% agarose gel, transferred to a membrane, and analyzed by hybridization with a radiolabeled HA-specific DNA probe. The positions and nucleotide lengths of single-stranded RNA markers (RiboRuler; Fermentas, Hanover, MD) are shown to the left. The most abundant product had the expected mobility of the full-length HA mRNA, with less abundant bands representing genomic RNA and unidentified readthrough transcripts, as indicated on the right.
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FIG. 3. Analysis of the expression of the HA protein, its incorporation into the vector particle, and trimerization. (A) Western blot analysis of NDV- and NDV-HA-infected cells and purified virions. Virions were purified from the clarified medium supernatants from infected cells by centrifugation over a sucrose gradient. Whole-cell lysates and purified virions were subjected to SDS-PAGE under denaturing and reducing conditions, followed by Western blot analysis of duplicate gels using antiserum raised against NDV virions (lanes 1 to 5) or a synthetic peptide representing the HPAIV HA1 subunit (lanes 6 to 10). Lanes 1 and 6, uninfected cell lysate; lanes 2 and 7, NDV-infected cell lysate; lanes 3 and 8, NDV-HA-infected cell lysate; lanes 4 and 9, purified NDV virions; lanes 5 and 10, purified NDV-HA virions. Cell lysate samples represent approximately equal numbers of cells, and virion samples represent approximately equal proportions of the purified virus preparations. (B) Analysis of NDV-HA following one (1x sucrose) and two (2x sucrose) rounds of purification by sucrose gradient centrifugation. Samples were subjected to SDS-PAGE under reducing and denaturing conditions. The gel in the panel on the left was analyzed by silver staining; the other two panels are replicate gels that were analyzed by Western blotting with polyclonal antibodies raised against NDV virions (middle panel) or a monoclonal antibody specific to the HA protein (right panel). Lanes 1, 3, 5, 7, 9, and 11, purified NDV virions; lanes 2, 4, 6, 8, 10, and 12, purified NDV-HA virions. The major NDV proteins HN, NP, F1, P, and M were identified according to published studies (2, 7, 18, 29). (C) Cross-linking analysis of the HA protein present in sucrose gradient-purified NDV-HA virions. Aliquots of NDV virions (lanes 1 and 3) or NDV-HA virions (lanes 2 and 4) were mock-treated (lanes 1 and 2) or subjected to cross-linking with formaldehyde (lanes 3 and 4). The samples were subjected to denaturing/reducing SDS, followed by Western blotting with an HA-specific monoclonal antibody. All of the lanes are from a single gel. (D) Nondenaturing PAGE analysis of the HA protein present in sucrose gradient-purified NDV-HA virions. Aliquots of NDV virions (lanes 1 and 3) or NDV-HA virions (lanes 2 and 4) were left undenatured (lanes 1 and 2) or were heated at 95°C for 1 h (lanes 3 and 4), which was done to reduce and denature the samples without introducing diffusible reducing or denaturing agents that might affect adjacent lanes during PAGE. The samples were subjected to nondenaturing PAGE and analyzed by Western blotting with the HA-specific monoclonal antibody. All of the lanes were from a single gel. Molecular masses (in kilodaltons), shown to the left of the blots, were determined by loading a MagicMark XP marker (Invitrogen) on the reducing gels and a NativeMark marker (Invitrogen) on the nonreducing gel.
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FIG. 4. Immunoelectron microscopy of purified NDV and NDV-HA virus particles. Purified virus preparations were adsorbed to grids, and antigens were detected with the same NDV- and HPAIV HA1-specific antibodies used in the Western blot analysis in Fig. 3, as indicated at the left, followed by gold-bead-labeled secondary antibodies. The grids were subjected to negative staining and analyzed by transmission electron microscopy. The virus particle size and morphology correspond to that previously described for NDV: generally rounded particles 100 to 500 nm in diameter (1).
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In some cases, insertion of foreign genes into genomes of nonsegmented negative strand viruses results in their reduced ability to replicate at otherwise permissive temperatures (6). To test this possibility, we titrated 107.5 PFU of the NDV or NDV-HA viruses in multiple monolayers of DF-1 cells, incubated the monolayers for 3 days at various temperatures, and determined the virus titers by staining the monolayers with crystal violet. The following titers were observed for NDV and NDV-HA, respectively: at 37°C, 107.6 and 107.6 PFU, and at 39°C, 107.4 and 107.4 PFU. At 41°C, only small pinpoint plaques were observed, and the titers were 107.0 and 106.6 PFU, respectively. No plaques were observed at 43°C. This suggests that insertion of the HA gene did not confer a significant increase in temperature sensitivity on the NDV vector.
When NDV and NDV-HA were inoculated in serial dilutions into embryonated eggs, the mean embryo death time was 56 h for NDV and 61 h for NDV-HA (not shown). We also inoculated chickens by the intranasal and ocular routes with 105 PFU of NDV or NDV-HA per chicken, sacrificed the animals on day 4, and analyzed the levels of infectious virus in the lungs, spleen, liver, kidney, gut, and brain. Although NDV was detected in all six animals inoculated, NDV-HA was detected in only one of six inoculated animals (data not shown). Thus, expression of the HPAIV HA protein by NDV and its incorporation into the vector particle did not confer any additional virulence or significantly change its tissue tropism in this natural avian host; on the contrary, the presence of the HA insert was somewhat attenuating.
Safety and shedding of the vaccine in a nonhuman primate model. To evaluate the safety and immunogenicity of NDV-HA in a primate model, eight African green monkeys were immunized by the intranasal and intratracheal routes with 107 PFU of NDV-HA per site. On day 42 after the initial immunization, four of the animals received a second dose of the vaccine via the same route, while the other four animals received medium alone. Serum samples, combined NW specimens, and TL specimens were taken at various time points to assess shedding of the NDV vector and the development of systemic and local humoral immune responses. After the first inoculation, seven of the eight animals had evidence of NDV shedding detected in NW and/or TL specimens taken on days 2 and 4 (Table 1). Most samples contained only a small quantity of infectious virus, with titers between 101 and 102 PFU/ml. However, three animals had titers between 102 and 103 PFU/ml in at least one site on at least 1 day, and one animal had a titer of 103.9 PFU/ml in the NW on day 2. In a separate experiment (results not shown), two African green monkeys received 107 PFU of the empty NDV vector, and comparable virus titers were detected in the TL samples (PFU/ml): 102.5 and 101.8 on day 2 and <100.7 and 102.8 on day 4. These results indicate that the HA insert did not detectably affect replication in a nonhuman primate model. We did not analyze vaccine virus shedding after the second dose because our experience with intranasal paramyxovirus-vectored vaccines (4) indicates that the first dose of a vaccine typically prevents detectible shedding of the second dose. However, since the second dose usually boosts the immune response, it is likely that there is limited replication not detectable by sampling of respiratory tract secretions. The comparable levels of replication of NDV-HA and the empty NDV vector in monkeys are in contrast to the data in chickens in which the insert was attenuating (see above). This difference may be explained by the greater level of NDV infection in the natural chicken host, thus allowing for detection of subtle differences in viral replication. Successful vaccines or promising vaccine candidates against human influenza, parainfluenza, and respiratory syncytial viruses typically are shed at titers of 103 to 105 PFU/ml in clinical trials (5, 12, 13), and it is clear that their immunogenicity depends on replication. In comparison, NDV-HA appears to be highly attenuated, perhaps slightly more attenuated than these other live vaccines.
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TABLE 1. Shedding of the NDV-HA vaccine virus in the upper and lower respiratory tracts of African green monkeys after a single inoculationa
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TABLE 2. Mucosal antibody responses in immunized African green monkeys after immunization with NDV-HAa
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TABLE 3. Serum antibody responses in immunized African green monkeys after immunization with NDV-HAa
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Serum samples were next analyzed for their ability to neutralize infectious HPAIV A/Vietnam/1203/2004 virus. Interestingly, despite the substantial induction of HA-specific serum IgG titers observed after either one or two doses of the vaccine, only sera collected after the second dose of the vaccine had detectable HPAIV-neutralizing titers. By day 56 (14 days after the second dose), all four animals achieved neutralizing antibody titers at or above 1:40. A titer of 1:40 determined by HAI has classically been viewed as predictive of protection in human adults (10); however, it is unclear how well HAI titers and protection of human adults against HPAIV correlates with a neutralization titer in nonhuman primates. The neutralizing titers decreased by day 70 (28 days after the second dose) but still remained well above 1:40 in three of four animals. The remaining animal in the two-dose group (animal 6) had a neutralization titer of 1:25 on day 70, which nonetheless likely would be sufficient to prevent death or severe disease upon HPAIV infection, particularly considering that it was associated with a robust mucosal IgA response in every animal.
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Other researchers are developing NDV as a possible vaccine vector for protection of birds against HPAIV infection (24, 28), which would provide a bivalent vaccine against two pathogens. We are interested in NDV as a human vaccine vector based on its high level of host range restriction in primates (2). A recent study demonstrated protective efficacy of an NDV-vectored HPAIV vaccine in mice (7). However, the mouse model is an uncertain predictor of NDV-based vaccine efficacy in humans for two reasons. First, it is unrealistic to expect that the level of host range restriction in rodents will be the same as in primates. Second, rodent models frequently provide overly optimistic evaluations of vaccine efficacy. For example, whole-virus inactivated vaccines against avian influenza viruses were highly immunogenic in mice and ferrets (17, 18) but very poorly immunogenic in humans (21, 26, 27). Whether it will be possible to make a single NDV-HA virus that would be acceptably attenuated and immunogenic in both poultry and humans is unclear.
As a human vaccine vector against HPAIV, NDV has several particular advantages. The intranasal route of administration is particularly well suited for the control of a respiratory virus and provides for needle-free immunization and is thus suitable for mass immunization. NDV is highly attenuated for replication in primates and is inefficiently shed. Its replication in nonhuman primates appears to be restricted to the respiratory tract, precluding concerns associated with spread to distal sites. NDV has a negligible incidence of recombination and thus could be used in prospective immunization against HPAIV with negligible risk of genetic exchange with circulating viruses. NDV can be grown efficiently in both embryonated chicken eggs and in Vero cells qualified for vaccine production. These findings identify NDV-HA as a potentially effective vaccine against HPAIV that should be further evaluated in clinical trials.
This research was supported in part by the Intramural Research Program of the National Institute of Allergy and Infectious Disease, National Institutes of Health.
We have no commercial interests in vaccines against avian influenza virus.
Published ahead of print on 22 August 2007. ![]()
Present address: Virginia-Maryland Regional College of Veterinary Medicine Center for Molecular Medicine and Infectious Diseases, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061. ![]()
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