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Journal of Virology, October 2007, p. 10474-10485, Vol. 81, No. 19
0022-538X/07/$08.00+0 doi:10.1128/JVI.01064-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Retrovirus Center and Virology Section, Department of Experimental Pathology, University of Pisa, I-56127 Pisa,1 Department of Public Health, University of Florence, I-50134 Firenze, Italy2
Received 17 May 2007/ Accepted 9 July 2007
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, containing a large part of the env gene of a clade B virus (strain M2) and all the rest of the genome of a clade A virus (a p34TF10 molecular clone of the Petaluma strain modified to grow in lymphoid cells), to gain insights into such resistance. FIV
was infectious and moderately pathogenic for cats and in vitro exhibited the neutralization specificity of the env donor. The experiments performed were bidirectional, in that cats preinfected with either parental virus were challenged with FIV
and vice versa. The preinfected animals were partially or completely protected relative to what was observed in naïve control animals, most likely due, at least in part, to the circumstance that in all the preinfecting/challenge virus combinations examined, the first and the second virus shared significant viral components. Based on the proportions of complete protection observed, the role of a strongly matched viral envelope appeared to be modest and possibly dependent on the time interval between the first and the second infection. Furthermore, complete protection and the presence of measurable neutralizing antibodies capable of blocking the second virus in vitro were not associated. |
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FIV is both a significant pathogen of domestic cats (42) and a widely used model to investigate HIV pathogenesis and approaches to AIDS vaccination (14, 16, 51, 54). In the present study, we developed a chimeric FIV, designated FIV
, having most of the env gene of a clade B virus and the rest of the genome of a clade A virus and used it in an attempt to gain insight into the variables that may affect the resistance to superinfection by a second strain of virus in this system, including the neutralization specificity of the viral envelope (Env).
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(Fig. 1A), was obtained starting from clone p34TF10, which carries the whole genome of FIVPET (GenBank accession no. NC_001482) (53). First, the stop codon in the open reading frame A accessory gene of p34TF10, which impairs the capability of this clone to grow in lymphoid cells, was removed by site-specific mutagenesis (43). Second, in an attempt to increase in vivo fitness, the entire env gene was replaced with that of an FIVPET reisolated from an experimentally infected cat (FIV275:1 [3]). Third, most of the env of the latter clone (amino acid positions 329 to 673) was replaced with the corresponding sequence amplified from ex vivo FIVM2. The viral stock was finally obtained by transfecting Crandell feline kidney cells and expanding the progeny virus in feline T-lymphoid MBM cells (3). Proper insertion and the absence of unwanted mutations were checked by sequencing the entire env gene exactly as described previously (44). Upon characterization, FIV
proved readily infectious for SPF cats, where it produced a florid acute-phase infection and a clearly evident depletion of circulating CD4+ T lymphocytes (data not shown; see below).
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FIG. 1. Schematic representation of the chimeric virus FIV and of how it was prepared, starting from the parental viruses FIVPET and FIVM2. The locations of the primers used for the PCR assays in Fig. 2 are also shown.
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) used for the preinfections. The challenges were performed under slight anesthesia. The i.v. challenge was carried out by injecting 1 ml of the virus preparations diluted to contain the indicated dose. The mucosal inoculum was deposited onto the anterior vagina in 100 µl pyrogen-free saline using smooth pipette tips. No discharge from the vagina was observed after the inoculum was injected. Quantitation and discrimination of the viruses replicating in infected cats. To quantitate and genotype the FIV(s) growing in the study cats, four gag- and env-based real-time PCR and reverse transcription (RT)-PCR assays were developed, which made use of the primers and probes shown in Fig. 1B. After preliminary experiments using plasmid DNA as standards, the following assay conditions were adopted: reaction mixture, 25-µl final volume containing 5 µl of either genomic DNA (200 to 500 ng) or cDNA, 100 nM probe, and 300 to 900 nM primers. The thermal cycling profile was as follows: 50°C, 2 min; 95°C, 10 min; 95°C, 15 s; and 60°C, 1 min (50 cycles) on the ABI Prism 7700 Sequence Detection System instrument (Applied Biosystems, Monza, Italy). The selectivity of these assays for the specific FIV targeted, albeit not absolute, was considered sufficient for the purposes of the study. Indeed, as shown by Fig. 2, the proviral and viral loads detected by measuring DNA or RNA of the homologous FIV with the gag-based assays were at least 2 log units higher than those detected by measuring DNA of the heterologous virus, regardless of the ratio between the two DNAs, and this differential was at least 3 log units with the env-based assays, which exploited the greater diversity existing between FIVPET and FIVM2 in this gene relative to gag (23.8%, with peaks of 36.4% in the variable regions targeted, versus 17.7%). For proviral-load quantitation, genomic DNA was extracted from PBMC or lymphoid tissues using the QIAamp DNA Blood Mini Kit (QIAGEN, Milan, Italy). The extracted DNA was then amplified in parallel with serial 10-fold dilutions (101 to 107) of the corresponding DNA plasmid standards diluted in 1 µg of genomic DNA. The sensitivity of the PCR assays was 50 copies per µg of genomic DNA, regardless of the target. For plasma viral-load quantitation, RNA was extracted from EDTA-collected blood with the QIAamp Viral RNA kit (QIAGEN) and reverse transcribed with reverse primer, and the cDNA was amplified in parallel with serial 10-fold dilutions (102 to 107) of the corresponding RNA transcripts. As evaluated by extracting and amplifying FIV-negative plasma spiked with serial 10-fold dilutions of RNA transcripts, the sensitivity of RT-PCR assays was 200 copies per ml, regardless of the target. Precautions to avoid misquantitation and false-positive and -negative results have been previously described (44).
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FIG. 2. Features of the PETgag-, PETenv-, M2gag-, and M2env-specific real-time PCR assays used in the study. (A) Forward primers (Fw), probes (Pr), and reverse primers (Rv) were designed based upon appropriately studied segments of gag or env of FIVPET or FIVM2 using Primer Express software (version 1.5; Applied Biosystems, Monza, Italy) and differed from the heterologous virus, as indicated under each oligonucleotide (nucleotide positions are based on FIVPET clone p34TF10, GenBank accession number NC_001482) (53). Note that in order to improve selectivity and fulfill real-time probe requirements, the M2gag primers and probe were designed from the antisense strand. (B to D) Selectivity of the PET-specific (open bars) and M2-specific (closed bars) assays, as determined by quantitating FIVPET and FIVM2 plasmids; the DNAs examined were FIVPET plasmids alone or FIVM2 plasmids alone (indicated at the tops of the graphs) at the copy numbers shown in the abscissa (B), 1 x 102 or 1 x 105 FIVPET plasmids (indicated at the tops of the graphs) mixed with the numbers of FIVM2 plasmids shown in the abscissa (C), and 1 x 102 or 1 x 105 FIVM2 plasmids (indicated at the tops of the graphs) mixed with the numbers of FIVPET plasmids shown in the abscissa (D). These degrees of selectivity were conserved in the RT-PCR assays, as determined by performing similar experiments with RNA transcribed on the viral plasmids (data not shown). The error bars represent standard deviations from three independent experiments.
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Serology. Plasma was tested for antibodies against whole FIVPET antigen by ELISA as described previously (36). Plasma specimens found to be reactive at dilutions of 1:100 or greater were considered antibody positive. Neutralizing antibodies (NA) were determined against 10 50% tissue culture infective doses (TCID50) of the appropriate FIV by using MBM cells as indicator cells and quantitation of reverse transcriptase activity in the supernatant as an end point readout, exactly as described previously (19).
Hematology and lymphocyte subset analyses. Complete blood counts and differential leukocyte counts were performed by standard methods. CD4+ and CD8+ T-cell counts were determined by flow cytometry using a FACScan (BD Biosciences-Life Science Research, Milan, Italy).
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challenge of cats preinfected with the parental viruses.
Two groups of five 72- and 57-month-old cats preinfected with 5 to 10 CID50 of FIVPET or FIVM2 34 and 36 months earlier, respectively, were used in this part of the study. Consistent with what is known about long-term steady-state FIV infections (51), the animals had moderate (FIVM2-preinfected) to low (FIVPET-preinfected) viral and proviral loads and markedly reduced circulating CD4+ T-cell counts (Table 1). Of note, the results of prechallenge monitoring corroborated the exquisite selectivity demonstrated by the assays used to differentiate/quantitate the infecting viruses during characterization (see Materials and Methods), since the animals consistently tested positive only if they had been infected with the FIV strain targeted by the assays (Fig. 3B and C). |
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TABLE 1. Parameters of infection in study cats at times of challenge
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FIG. 3. Set points in FIVPET- or FIVM2-preinfected cats and naïve controls at various times after i.v. challenge with FIV . (A) Naïve cats. FIV plasma viremia and proviral loads were determined with both the PETgag-specific assay (empty symbols) and the M2env-specific assay (solid symbols). Note that cats in this age range (27 months at challenge) showed no major spontaneous CD4+ T-lymphocyte count changes. (B) FIVPET-preinfected cats. FIVPET (dashed lines) and FIV (continuous lines) plasma viremia and proviral loads determined with the PETenv- and M2env-specific assays, respectively. (C) FIVM2-preinfected cats. FIVM2 (dashed lines) and FIV (continuous lines) plasma viremia and proviral loads determined with the M2gag- and PETgag-specific assays, respectively. Anti-FIV antibodies were determined by ELISA using whole FIV antigen.
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and then monitored for 9 months. Postchallenge (PC), all the controls developed sustained infections by all the parameters measured, including a progressive decline in CD4+ T-lymphocyte counts, which by the end of follow-up were approximately halved. Importantly, the kinetics and levels of plasma viremia and PBMC proviral loads of these animals were similar independently of the PETgag or M2env specificity of the assay used to monitor FIV
infection, confirming the comparable performance characteristics of these assays (Fig. 3A).
In the preinfected cats (Fig. 3B and C), FIV
challenge produced no appreciable changes in the preexisting infection set points. Furthermore, only one preinfected animal showed traces of the chimeric virus in the bloodstream. This was cat no. 2647, preinfected with FIVM2, which, although constantly negative for FIV
in plasma, reacted transiently positive for the chimeric provirus in the PBMC 1 month PC. The other nine preinfected animals presented no evidence of FIV
in the circulation, as shown by uniformly negative FIVM2- and FIVPET-specific PCR and RT-PCR assays in the FIVPET-preinfected cats and in the FIVM2-preinfected cats, respectively, throughout the follow-up. Also, preexisting anti-FIV ELISA antibody titers, CD4+ T-cell counts (Fig. 3B and C), and infectious-cell loads in the PBMC (data not shown) underwent no appreciable variations PC.
(ii) Mucosal challenge.
Compared to systemic challenge, mucosal FIV infections may be more difficult to control immunologically (5, 6, 39, 40, 44). To assess how the animals preinfected with the parental viruses dealt with mucosal challenge with the chimera, after follow-up of the systemic challenge described above was terminated, all the FIVPET- and FIVM2-preinfected cats were exposed intravaginally to 100 TCID50 of FIV
and monitored for an additional 9 months. While two of three age-matched uninfected cats used as controls became readily FIV
infected (Fig. 4A), none of the FIVPET-preinfected cats yielded FIV
RNA or provirus in peripheral blood throughout the follow-up (Fig. 4B). In contrast, among the FIVM2-preinfected cats, two (no. 2658 and 2668) yielded the FIV
provirus in PBMC at month 1 PC, and one of these (no. 2658) was also positive for FIV
RNA in plasma at month 9 PC (Fig. 4C).
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FIG. 4. Viral set points in FIVPET- or FIVM2-preinfected cats and naïve control cats at various times after intravaginal challenge with FIV . (A) Naïve cats. FIV plasma viremia and proviral loads determined with the M2env-specific assay. (B) FIVPET-preinfected cats. FIVPET (dashed lines) and FIV (continuous lines) plasma viremia and proviral loads determined with the PETenv- and M2env-specific assays, respectively. (C) FIVM2-preinfected cats. FIVM2 (dashed lines) and FIV (continuous lines) plasma viremia and proviral loads determined with the M2gag- and PETgag-specific assays, respectively.
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provirus. On the other hand, three animals preinfected with FIVM2 yielded both the preinfecting virus and the FIV
provirus at comparable copy numbers per µg of extracted tissue DNA (Fig. 5B). Of these, one (no. 2647) had tested transiently FIV
positive in the circulation after the first challenge and two after the second challenge (no. 2658 and 2668).
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FIG. 5. Proviral loads of preinfecting viruses and challenge FIV in selected tissues of cats at the end of the experiment shown in Fig. 4. (A) FIVPET-preinfected cats examined with the M2env- and PETenv-specific assays. (B) FIVM2-preinfected cats examined with the M2gag- and PETgag-specific assays. Open bars, preinfecting viruses; closed bars, FIV .
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-neutralizing activity was detected in three FIVM2-preinfected cats, two of which also possessed NA for the homologous virus, and in one FIVPET-preinfected animal, who instead invariably had NA for the homologous virus. Consistent with previous findings (12), essentially no cross-neutralization of FIVPET and FIVM2 was observed (Table 2). The tests were repeated at mucosal challenge to assess possible changes relative to the above-mentioned NA status resulting from the prior systemic challenge, but no changes were detected (data not shown). |
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TABLE 2. Virus NA in day-of-challenge sera of the preinfected cats
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with the parental viruses.
The animals used in this part of the study were 36-month old cats that had been infected with FIV
10 months earlier. Five were the ones used as controls for systemic FIV
challenge in the study described above, and five had been infected contemporaneously but had been left untreated. As expected, they were all positive by the PETgag- and PETenv- but not by the M2gag- and M2env-specific assays and had viral set points typical of a postacute FIV infection of moderate severity (Table 1 and Fig. 6B and 7B). These animals were sorted into two groups of five with comparable viral set points and used as reported below.
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FIG. 6. Viral set points in FIV -preinfected cats and naïve control cats after i.v. challenge with FIVPET. (A) Naïve cats. FIVPET plasma viremia and proviral loads determined with the PETenv-specific assay. (B) FIV -preinfected cats. FIV (dashed lines) and FIVPET (continuous lines) plasma viremia and proviral loads determined with the M2env- and PETenv-specific assays, respectively.
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FIG. 7. Viral set points in FIV -preinfected and naïve control cats after i.v. challenge with FIVM2. (A and B) First challenge with 10 CID50. (C and D) Second challenge with 30 CID50. (A and C) Naïve cats. FIVM2 plasma viremia and proviral loads determined with the M2gag-specific assay. (B and D) FIV -preinfected cats. FIV (dashed lines) and FIVM2 (continuous lines) plasma viremia and proviral loads determined with the M2gag- and PETgag-specific assays, respectively.
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-preinfected cats and five virus-naïve age-matched controls were challenged i.v. with 10 CID50 of FIVPET and monitored for 9 months. PC, all the controls readily developed the expected plasma viremia and PBMC provirus loads (Fig. 6A). In the FIV
-preinfected cats, the challenge failed to modify the preexisting plasma viremia with regard to both the viral-RNA load and the FIV strain detected throughout the follow-up. The numbers of infectious units found in the PBMC and FIV binding antibody titers also remained unchanged relative to what was observed prechallenge (data not shown); however, when observations were limited to 1 and 3 months PC, these cats underwent moderate to low elevations in the preexisting levels of FIV
provirus in PBMC and showed clear evidence that the PBMC also harbored FIVPET (Fig. 6B).
(ii) Challenge with FIVM2.
The second group of FIV
-preinfected cats and a group of four age-matched uninfected controls were inoculated i.v. with 10 CID50 of FIVM2. For 9 months PC, none of the FIV
-preinfected cats showed evidence that FIVM2 was circulating in the blood, as indicated by consistently negative M2gag-specific PCR and RT-PCR (Fig. 7B). However, although a similar dose of virus had been fully effective at infecting younger cats in the previous experiment, the challenge was only partially successful, since two of four controls escaped infection, as revealed by persistently negative virological (Fig. 7A) and serological (data not shown) tests. For this reason, all the FIV
-preinfected cats, along with the two controls that had escaped the infection, as described above, and three additional naïve cats, were inoculated i.v. with 30 CID50 of FIVM2. As shown by Fig. 7C, this second challenge with a higher viral dose readily infected all the controls. Conversely, the FIV
-preinfected cats showed no substantial changes in preexisting plasma viremia and PBMC provirus loads, even after this robust challenge. However, two cats in the group (no. 2884 and 2897) yielded the challenge virus in plasma from month 3 PC onward, as well as the challenge provirus in PBMC starting from month 6 PC.
(iii) Detection of the challenge viruses in the lymphoid organs.
At the end of the follow-up, all of the cats preinfected with the chimera and challenged with FIVPET or FIVM2 were euthanized, and the viral contents in their mesenteric lymph nodes, spleens, and bone marrow were characterized. As shown by Fig. 8A, five of five FIVPET-challenged cats were found to carry the challenge virus in some or all the tissues examined, and in one (no. 2839), this was the only virus detected. Among the FIVM2-challenged cats, two of five tested positive for the challenge virus, and these were the same animals whose peripheral blood had tested positive (Fig. 8B). Interestingly, in a few instances, the proviral loads of the challenge viruses exceeded or even replaced those of FIV
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FIG. 8. Proviral loads of the preinfecting FIV and of the challenge viruses in selected tissues of cats at the ends of the experiments shown in Fig. 6 and 7. (A) FIVPET-challenged cats examined with the M2env- and PETenv-specific assays. (B) FIVM2-challenged cats examined with the M2gag- and PETgag-specific assays. Open bars, FIV ; closed bars, challenge viruses.
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-preinfected cats were examined for NA. All had moderate to low titers of NA for both FIV
and FIVM2, but none blocked FIVPET (Table 2). |
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was generated by replacing a large part of the Env of FIVPET (clade A), specifically, the part including the domains known to be involved in antibody-mediated neutralization (3, 35, 48, 49), with the corresponding region of FIVM2 (clade B). In previous superinfection studies, preinfection with FIVPET had exerted long-term beneficial effects against fully virulent FIVM2 (45) and significantly protected against a heterologous intraclade challenge given systemically or mucosally (44). Importantly, FIV
was effectively neutralized by the sera of FIVM2-infected cats but very poorly or not at all by the sera of FIVPET-infected cats and elicited NA that neutralized itself and FIVM2 but not FIVPET, showing that in the new setting the transferred Env had conserved a great part, and possibly all, of its neutralization specificity. Furthermore, FIV
readily infected naïve cats and, as judged by the depletion of circulating CD4+ T cells produced, was also moderately pathogenic.
FIV
was used to investigate the role of Env compared to the other viral gene products in the resistance of lentivirus-infected hosts to superinfection by a second strain of the virus (8, 50) in two sets of experiments. In the first set, it served as a challenge for cats that had been infected with either parental virus approximately 3 years in advance, while in the second, it served to preinfect cats that 10 months later were challenged with either parental virus. The outcomes of the challenges were determined by monitoring the animals for 9 months by using appositely developed real-time PCR and RT-PCR assays in appropriate combinations that permitted the independent detection and quantitation of FIV
and the parental viruses. Although we did not specifically look for the emergence of recombinant viruses in the cats that became superinfected, the results obtained in the assays targeting gag or env of the same viral strain were uniformly highly concordant, making it unlikely that recombinants were a major fraction of the total viral burden in such animals.
The overall results clearly demonstrated a general tendency of the preinfected cats to contain the challenge viruses: indeed, they were undetectable in the peripheral blood of many preinfected cats (Table 3) and, when detected, exhibited much reduced viral RNA and proviral DNA loads compared with those in naïve animals challenged in parallel as controls. Although this aspect was not specifically addressed, the fact that this extent of protection had not been observed in a previous superinfection study involving the same viral strains (45) suggests that the presence of identical components in the two viruses significantly facilitated containment of the second virus. Since plasma and PBMC were often found to be negative for the challenge viruses in cats that had clearly positive lymphoid organs when euthanized at the end of the experiments, the overall results also showed that characterizing the virus contents of a few blood samples may not suffice to rule out infection by a second virus. Similar discrepancies between the results of examining peripheral blood and lymphoid organs have been reported in several superinfection studies with wild-type and attenuated lentiviruses (15, 24, 30, 47), suggesting that containment of a second virus can occur not only at the level of establishment of the infection, but also at the level of how freely it may circulate in blood.
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TABLE 3. Summary of the outcomes of challenging preinfected cats
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If we examine the relative importance of a matched Env versus a matched non-Env component in resistance to superinfection by comparing the numbers of cases of complete protection that occurred, the results of the first part of the study fully support the above contentions, as well as previous SIV data showing that complete protection can be independent of a completely matched Env (20). Indeed, there were fewer cats completely protected against FIV
in the group preinfected with FIVM2, which shared only Env with the challenge virus, than in the one preinfected with FIVPET, which shared all of the virion except Env with FIV
(two of five versus five of five). Of note, no cat in the latter group allowed FIV
infection despite the fact that challenge was carried out twice, first systemically and then intravaginally. This might indicate that resistance to superinfection was particularly robust in this preinfection-challenge combination, although the fact that FIV
was molecularly cloned and grown in vitro, two circumstances known to weaken FIV challenge (14, 23, 25), may have contributed significantly.
The indications of the second set of experiments were less straightforward. First, all or a large fraction of the FIV
-preinfected cats became superinfected with FIVPET or with FIVM2, respectively, possibly due to the circumstances that these viruses, being ex vivo derived, had a more complex quasispesies than the FIV
used as a challenge in the experiment described above (14, 23) and that the time elapsed after preinfection was shorter than in the first part of the study. That the duration of this interval can influence the outcomes of superinfections has been observed in numerous studies with live attenuated SIV vaccines (reviewed in reference 32), as well as in an experiment with HIV-2 in which no macaques became superinfected when challenged 8 weeks after initial infection versus four of four and one of four challenged at weeks 4 and 2, respectively (41). Second, and most interestingly, three of five cats following challenge with FIVM2 and none following challenge with FIVPET proved to be completely protected, suggesting that under the experimental conditions used in this part of the study, effector mechanisms targeting the viral Env but distinct from NA played an important role in blocking the second virus. The implicated mechanisms might include antibody-dependent cell cytotoxicity mediated by Env-specific nonneutralizing antibodies, Env-specific cell-mediated immune responses, and viral interference (24, 34). Thus, the possibility exists that not only the strength of resistance to superinfection, but also the effectors implicated, evolved with time after the first infection (52).
In summary, this investigation of the resistance of FIV-preinfected cats to superinfection by a second strain of the virus indicated that (i) in long-term-infected hosts, resistance is mainly mediated by effector mechanisms that do not target strain-specific sites of Env; (ii) if these sites play a dominant role, it is only for a limited time after the first infection; and (iii) in any case, the role of NA is minimal or nonexistent. Many efforts are being done to identify correlates of protection from lentiviruses. As recently discussed (22, 31), the findings with primate lentiviruses have emphasized the significance of the mediators elicited by internal proteins of the virion, while NA are thought to play an ancillary function, if any. By and large, the present results with a nonprimate lentivirus fully agree with this picture.
Published ahead of print on 18 July 2007. ![]()
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nef. J. Virol. 75:1507-1515.
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