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Journal of Virology, September 2007, p. 10137-10150, Vol. 81, No. 18
0022-538X/07/$08.00+0 doi:10.1128/JVI.01233-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Lili Wang,5
Qingmei Jia,2
Ting-Ting Wu,2
Julian P. Whitelegge,3
Hongyu Deng,4,5
Z. Hong Zhou,6 and
Ren Sun1,2,4*
Molecular Biology IDP,1 Department of Molecular and Medical Pharmacology,2 the Pasarow Mass Spectrometry Laboratory and NPI-Semel Institute for Neuroscience and Human Behavior, David Geffen School of Medicine,3 School of Dentistry, University of California at Los Angeles, Los Angeles, California 90095,4 Center for Infection and Immunity, National Laboratory for Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China,5 Department of Pathology and Laboratory Medicine, University of Texas—Houston Medical School, Houston, Texas 770306
Received 13 June 2006/ Accepted 26 June 2007
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In gammaherpesviruses, the functions of many of these tegument proteins are virtually unexplored. Several studies have recently identified the protein constituents of the virions of gammaherpesviruses, including murine gammaherpesvirus 68 (MHV-68), Epstein-Barr virus (EBV), Kaposi's sarcoma-associated herpesvirus (KSHV), and rhesus monkey rhadinovirus (RRV), by mass-spectrometric analyses (4, 6, 23, 31, 32, 37, 55). MHV-68 is a facile model for studying the gammaherpesvirus lytic phase (33, 41, 44, 51, 52), particularly virion structure, composition, and morphogenesis (6, 42, 48). Detergent sensitivity experiments and comparative genomics data suggest that a number of uncharacterized virion proteins are tegument proteins. The functions of these MHV-68-specific tegument proteins can be studied by mutagenesis, taking advantage of herpesvirus genomes cloned as bacterial artificial chromosomes (BACs) (1, 5, 10, 40, 41). Analysis of mutants null for genes encoding tegument proteins, with phenotypes for the assembly and egress of virions or for the immediate-early phases of infection of a naïve cell, promises to unravel the functional roles of these gammaherpesvirus-specific tegument proteins. Indeed, one such protein, encoded by MHV-68 ORF45, is essential for gene expression in the immediate-early phase of infection (21). In KSHV, the ORF45 tegument protein is capable of binding IRF7 and preventing its translocation to the nucleus, thus inhibiting the secondary response to type I interferon signals (56, 57).
This paper explores the function of a gamma subfamily-specific protein, encoded by MHV-68 ORF52, in the lytic phase of infection. To study this protein, we took advantage of a model for the gammaherpesvirus lytic cycle, MHV-68, that is capable of completing the lytic program and productively infecting cultured cells without chemical or genetic induction (43, 48, 52). MHV-68 ORF52 is an abundant virion protein (6), as are its homologues in KSHV (with which it shares 28% identity) (55), EBV (BLRF2; 40% identity) (23, 38), and RRV (32). In MHV-68, ORF52 is expressed abundantly as a 0.4-kb transcript with true-late kinetics, activated after viral DNA replication (2, 12, 28). Transposon mutagenesis of the MHV-68 genome cloned as a BAC indicates that ORF52 is essential to virus replication (41). The EBV gene product homologue, BLRF2, is a highly immunogenic protein, a target for antibody responses in acute EBV infection and a useful biomarker for lytic EBV infection (14, 19, 35). However, the function of the ORF52/BLRF2 family of proteins is unknown. Here, we report that the MHV-68 ORF52 tegument protein is essential to complete virion morphogenesis and egress in the cytoplasm.
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PCR, cloning, and plasmids. An enhanced green fluorescent protein (EGFP) fusion expression plasmid containing full-length MHV-68 ORF52 was generated by PCR amplification from genomic herpesvirus DNA and cloning in frame into pEGFPC1 (Clontech, Mountain View, CA) with primers 1 and 2 (Table 1). Two N-terminal FLAG-tagged MHV-68 ORF52 expression constructs were similarly generated by cloning ORF52 into pFLAG-CMV2 (Sigma-Aldrich, St. Louis, MO) at BglII and XbaI sites with primers 3 and 2 and by cloning ORF52 into the cytomegalovirus immediate-early promoter-driven pcDNA5/TO vector (Invitrogen) at KpnI and XbaI sites with primers 4 and 2) to generate FLAG-ORF52. Plasmids were transfected into NIH 3T3 murine fibroblasts or human 293T cells with Lipofectamine 2000, according to the manufacturer's recommendations, for localization and complementation experiments.
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TABLE 1. Primers used in this study
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Restriction fragment and Southern blot analyses of MHV-68/BAC clones.
BAC DNAs were digested for 12 h at 37°C with restriction enzyme HindIII or EcoRI, electrophoresed on a 1x Tris-acetate-EDTA-0.8% agarose gel, and analyzed by ethidium bromide staining. Restriction fragments were matched with predicted MHV-68/BAC genomic fragments by Gene Construction Kit software (Textco BioSoftware, West Lebanon, NH). DNA fragments in gels were transferred to Hybond N+ nitrocellulose membranes (Amersham Pharmacia Biotech) by Southern blotting, UV-cross-linked, probed, and washed by using standard protocols (22). The probe, a 700-bp PCR product in the ORF52 locus (primers 2 and 7), was generated with a random priming kit using [
-32P]dCTP (RediPrime II, Amersham Biosciences, Piscataway, NJ) and solid-phase cleanup using a MicroSpin G-25 minicolumn (Amersham Pharmacia Biotech). Radioactivity was detected on a STORM imager with ImageQuant software (Molecular Dynamics, Sunnyvale, CA).
52S transfection and complementation. Phenotyping and complementation of 52S by transfection was as follows. WT MHV-68/BAC, 52S, and 52R BAC DNAs (300 ng/well) plus empty vector (100 ng/well) or 52S plus plasmid DNA expressing FLAG-ORF52 (100 ng/well) were transfected into subconfluent 293T cells with Lipofectamine 2000 reagent (Invitrogen), incubated in Opti-MEM I medium (Gibco) without antibiotics, according to the manufacturer's recommendations, with medium changed after 12 h. At intervals posttransfection, supernatant was collected and cleared of any debris by centrifugation at 1,500 x g, for a plaque assay (51) and to quantify released viral DNA by q-PCR, and cells were lysed in 1x passive lysis buffer (PLB) (Promega, Madison, WI) to analyze viral protein expression and viral DNA replication. Cultures were observed at 6 days posttransfection for cytopathic effect (CPE).
Infection with 52C virus. Complemented 52C virus was obtained from supernatants of 293T cells cotransfected with 52S and FLAG-ORF52. 52C virus could be propagated on ORF52-expressing 293T cells that had been transfected one day prior to 52C infection with FLAG-ORF52 expression plasmid (293T/f52 cells). Viral DNA in 52C viral stocks was quantified by q-PCR, and infectivity per genome copy was estimated by a limiting dilution series on 293T/f52 cells scoring for CPE at 1, 2, 5, and 6 days postinfection (d.p.i.), measurement of replicated viral DNA by q-PCR, and Western blotting to detect viral late antigens. All cotransfections were screened for inadvertent reversion by attempted propagation on 293T and BHK-21 cells. The reversion rate was <1 PFU/108 viral DNA copies. MHV-68/BAC and 52R viruses were estimated to have a ratio of 35 ± 6 genome copies/infectious unit (PFU), and 52C virus had a ratio of 450 ± 90 genome copies/infectious unit. For infections, NIH 3T3, 293T cells, or 293T/f52 cells were inoculated with 0.1 or 10 infectious units/cell of MHV-68/BAC, 52R, and 52C viruses, and inocula were removed after 6 h. At intervals postinfection, viral DNA was purified from supernatants and cells and quantified by q-PCR, and viral protein was analyzed by Western blotting.
Real-time q-PCR. Transfected and infected 293T cells were analyzed for viral DNA replication and release into the supernatant in a duplicate 96-well format. Viral DNA was isolated from supernatants clarified by centrifugation at 1,500 x g by using a scaled DNeasy protocol (QIAGEN) or from cell pellets in 1x PLB by rapid liquid N2 freeze-37°C thaw once, incubation with 1 ng/µl proteinase K (Sigma-Aldrich) at 37°C for 1 h, extraction in 25:24:1 phenol-chloroform-isoamyl alcohol, precipitation in 70% ethyl alcohol at –20°C for 12 h, a cold 70% ethyl alcohol wash, and resuspension in 1x PCR buffer. Duplicate 25-µl q-PCRs with 5% (by volume) of supernatant DNA, 25% (by volume) of extracted cellular DNA, or MHV-68/BAC DNA standards were analyzed using a Platinum SYBR green q-PCR kit (Invitrogen) and primers within MHV-68 ORF57 (sense, 5'-ACTGAAACCTCGCAGAGGTCC-3'; antisense, 5'-GCACGGTGCAATGTGTCACAG-3'). q-PCR using the iQ SYBR green supermix PCR kit (Bio-Rad, Hercules, CA) or ORF65 primers (sense, 5'-GTCAGGGCCCAGTCCGTA-3'; antisense, 5'-TGGCCCTCTACCTTCTGTTGA-3') yielded comparable sensitivity and reproducibility. All q-PCRs were performed with a DNA Engine Opticon II instrument (MJ Research/Bio-Rad) and viral copy numbers analyzed with Opticon and Microsoft Excel software calibrated to standards ranging from 8 to 1.6 x 107 MHV-68/BAC genome copies.
Terminal repeat assay. Total viral DNA was purified by q-PCR (see above) at 1, 3, 4, and 6 days posttransfection from 293T cells transfected with MHV-68/BAC DNA, 52S, or 52S-plus-FLAG-ORF52 cotransfection scaled to a 24-well format. Extracted DNA was resuspended in 1x NE buffer no. 2 (New England Biolabs, Ipswich, MA), HindIII digested, separated by 1x Tris-acetate-EDTA-0.8% agarose gel electrophoresis, and Southern blotted as describe above. The Southern blot was probed with a 0.8-kbp double-stranded DNA fragment (nt 117560 to 118314) PCR-amplified from an MHV-68 genomic region adjacent to the terminal repeat (51).
Viral particle isolation and detergent sensitivity assays. Viral particles were purified from the supernatants of MHV-68/BAC-transfected and 52S/FLAG-ORF52-cotransfected 293T cultures by discontinuous sucrose density gradient ultracentrifugation as previously described (6). Intracellular viral particles were released from pelleted 52S-transfected 293T cells at 6 days posttransfection by rapid liquid N2 freeze-37°C thaw once in 20 mM Tris, pH 7.8, and 50 mM NaCl (TN buffer), supplemented with 1 mM CaCl2 and 1 mM MgCl2. Particle preparations were cleared of insoluble debris by centrifugation at 3,500 x g, and ultracentrifuged through a two-step 25% and 50% sucrose cushion at 42,000 x g in an SW41Ti rotor (Beckman, Palo Alto, CA) at 4°C for 2 h with slow acceleration and braking. The visible band at the interface was collected, pelleted at 89,000 x g, and resuspended in TN buffer for electron microscopy, sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and Western blot analyses. Detergent sensitivity assays were performed as previously described (6). For dissociation of ORF52, virions (2,000 PFU) were left untreated or treated with detergents for 15 min at 37°C and pelleted in a tabletop centrifuge at 4°C and 20,000 x g for 45 min. Detergents used were as follows: radioimmunoprecipitation A buffer (RIPA buffer) containing 150 mM NaCl, 50 mM Tris-HCl, pH 7.4, 1% NP-40, 0.25% Na-deoxycholate, 1 mM Na3VO4, 1 mM NaF, and 1 mM EDTA; HiNa medium, containing 250 mM NaCl, 20 mM Tris-HCl, pH 7.8, 2% NP-40, and 1 mM EDTA; and TxNP medium, containing 10 mM Tris-HCl, pH 8.5, 4% NP-40, 2% Triton X-100, 0.15% SDS, and 1 mM EDTA.
Antibodies, immunoblotting, and immunofluorescence. Polyclonal antibodies against MHV-68 ORF26, ORF45, ORF52, ORF62, ORF65, and ORF67 proteins were generated by cloning ORFs in frame into pET30b+ vector (Novagen), and for generating anti-ORF52 polyclonal serum, a full-length ORF52 PCR fragment was also cloned into the pQE70 (QIAGEN) bacterial expression vector. Briefly, for each antiserum, protein expression in log-phase E. coli strain BL21 was induced with IPTG (isopropyl-ß-D-thiogalactopyranoside; 1 µg/ml) for 2 to 4 h, bacteria were lysed, and His-tagged viral protein was batch isolated on Ni-nitrilotriacetic acid agarose beads (QIAGEN), washed, and eluted according to the manufacturer's instructions. The quality of purified His-ORF52 was determined by SDS-PAGE with Coomassie blue detection and Western blotting and detection with anti-(penta-)His monoclonal antibody (QIAGEN) and anti-MHV-68 serum. Individual bacterially expressed proteins were used to immunize New Zealand White rabbits (Covance, Denver, PA) to generate polyclonal antisera. Anti-gp150 and anti-MHV-68 sera were a kind gift of James Stewart (University of Liverpool, United Kingdom) and have been described previously (42, 52). Mouse monoclonal antibody M2 against a FLAG epitope was purchased from Sigma (St. Louis, MO). For Western blotting, after primary antibody incubation, anti-rabbit or anti-mouse immunoglobulin G (IgG) conjugated with horseradish peroxidase (Sigma) was used as a secondary antibody. Antigens were detected by chemiluminescence (ECL+PLUS; Amersham Pharmacia Biotech) with a STORM imager and analyzed by ImageQuant. The indirect immunofluorescence assay was performed as described previously (22), with either M2 monoclonal antibody followed by anti-mouse IgG conjugated with Cy3 (Amersham Pharmacia Biotech) or anti-ORF65 or anti-p115/Golgi apparatus (Santa Cruz Biotechnology, Santa Cruz, CA) antisera followed by Cy3-conjugated anti-rabbit IgG (Amersham Pharmacia Biotech) secondary antibody. Chromatin was stained with DAPI (4',6'-diamidino-2-phenylindole), slides were mounted in Vectashield (Vector Laboratories, Burlingame, CA), and images were captured by an epifluorescent Leica DMIRB microscope with a mounted MagnaFire SP charge-coupled-device camera (Olympus, Melville, NY) and Adobe Photoshop software.
Electron microscopy.
Stages of viral assembly and particle morphology were determined by cryo-electron microscopy as previously described (6, 54). Cryo-electron microscopy micrographs of viral particles embedded in vitreous ice were recorded at 100 kV in a JEOL JEM1200 electron cryomicroscope (JEOL Ltd., Tokyo, Japan), at a magnification of x30,000 with an electron dosage of
6 electrons/Å. For thin-section TEM, 293T cells were transfected with MHV-68/BAC or 52S or were cotransfected with the 52S/FLAG-ORF52 expression construct, collected at 6 days posttransfection in phosphate-buffered saline, fixed in 2% electron microscopy-grade glutaraldehyde (Ted Pella, Redding, CA) in phosphate-buffered saline at 4°C for 12 h, postfixed in 1% OsO4, dehydrated, and embedded in Epon. Approximately 60- to 70-nm-thin sections were stained with 2% uranyl acetate and 0.3% lead citrate and examined at 80 kV on a JEOL JEM-100CX electron microscope (47).
Mass spectrometry. Proteins in purified viral particles were separated by denaturing SDS-PAGE (10%), stained with SYPRO Ruby (Molecular Probes, Eugene, OR), excised, and digested in gel with mass spectrometry-grade modified trypsin Gold (Promega), and peptides were extracted (6, 39, 50) for mass and fragment ion analyses by micro-liquid chromatography with tandem mass spectrometry (µ-LC/MS-MS) using a quadrupole time-of-flight hybrid mass spectrometer with data-dependent acquisition (QSTAR XL; MDS Sciex, Concord, ON, Canada). LC/MS-MS-generated peptide product ion mass spectra were displayed by integral Analyst QS software and then matched to the predicted MHV-68 proteome with Mascot software (Matrix Science, Boston, MA). Detection of ORF64 in WT MHV-68 virions was confirmed by µ-LC/MS-MS with peptide matching by using Sequest software as previously described (6, 50).
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FIG. 1. MHV-68 ORF52 encodes a capsid-associated tegument protein. (A) Identification of ORF52 virion protein. Virions (V, approximately 5,000 PFU) were incubated with 2% Triton X-100 and pelleted. Supernatant (S) and pellet (P) were removed, denatured in Laemmli buffer, and separated on a 13% SDS-polyacrylamide gel. Western blots are incubated with polyclonal antisera generated in New Zealand White rabbits to recombinant viral proteins glycoprotein 150 (upper panel), ORF45 (middle panel, top row), ORF26 (middle panel, bottom row), and ORF52 (lower panel). Molecular mass markers, in kDa, are shown. Detgt., detergent. (B) Dissociation of ORF52 protein from the capsid. Virions were left untreated (WT) or treated with indicated detergents for 15' at 37°C and pelleted in a tabletop centrifuge at 4°C, 20,000 x g for 45 min. Detergents were RIPA buffer, 2% high-salt NP-40 (HiNa), or 2% Triton X-100 plus 4% NP-40 (TxNP). Western blots are incubated with polyclonal antisera generated in New Zealand White rabbits to the recombinant viral proteins glycoprotein 150, ORF45, ORF26, ORF65/M9, and ORF52. Molecular mass markers, in kDa, are shown.
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Thus, ORF52 can be classified as a capsid-associated tegument protein, as opposed to an outer tegument protein, like ORF45, according to these results. The EBV BLRF2 protein (19 kDa), as well as the RRV ORF52 protein (15 kDa), is a virion protein with low detergent sensitivity, suggesting conservation of capsid-associated packaging of this family of proteins among different gammaherpesviruses (23, 32).
MHV-68 ORF52 protein localizes to the cytoplasm. As the subcellular localization of tegument proteins is inherently related to their functions (29, 30), we studied the subcellular localization of gammaherpesvirus ORF52 family proteins in murine fibroblasts permissive to viral replication by expressing them as EGFP fusion proteins and by immunofluorescence. The MHV-68 EGFP-ORF52 fusion protein localizes predominantly to distinct punctae in the cytoplasm (Fig. 2c). In many transfected cells, there is also a diffuse cytoplasmic localization, consistent with localization of transfected FLAG-ORF52 protein (Fig. 2b). This pattern partially colocalizes with p115, a cytoplasmic marker for compartments derived from the Golgi apparatus and vesicles in the secretory pathway (Fig. 2c and f). The polyclonal anti-ORF52 serum that we generated provided insufficient specificity in the immunofluorescence assay. Therefore, to study the localization of ORF52 in the context of infection, we infected cells expressing EGFP-ORF52 with WT MHV-68. The distinct localization pattern observed in MHV-68 EGFP-ORF52 transfectants is preserved in cells infected with WT MHV-68 at a high multiplicity of infection (i.e., 2) (Fig. 2g and h). Thus, the cytoplasmic localization of ORF52 protein is reminiscent of viral interaction with the secretory pathway or cytoskeletal components.
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FIG. 2. Localization of MHV-68 ORF52 protein. NIH 3T3 cells were transfected with tagged expression constructs encoding full-length predicted fusions of viral ORF proteins, fixed, and imaged by fluorescence microscopy or fixed and permeabilized for indirect immunofluorescence assay. Representative images are shown. Localizations of EGFP alone (a), FLAG-ORF52 by immunofluorescence assay (b), and MHV-68 EGFP-ORF52 (c) are shown. Images from an immunofluorescence assay with anti-FLAG monoclonal antibody and anti-mouse/Cy3 secondary antibody (b) or anti-p115/Golgi apparatus and anti-rabbit/Cy3 secondary antibody (d) are shown. DAPI staining (e) and a merge (f) of fixed transfected cells in panels c and d are also shown. NIH 3T3 cells expressing MHV-68 EGFP-ORF52 infected 1 day posttransfection with WT MHV-68 (multiplicity of infection, 2) (g), probed 24 hours postinfection by immunofluorescence assay with polyclonal anti-ORF65 antibody and anti-rabbit/Cy3 secondary antibody (h).
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FIG. 3. Construction of an ORF52-null virus (52S) and its revertant (52R). (A) Cointegration and resolution of targeting constructs with MHV-68/BAC. A HindIII restriction site and stop codons in all three left-reading ORFs were introduced into a 700-bp fragment of the MHV-68 ORF52 locus, amplified by two-step PCR with a proofreading DNA polymerase, cloned into shuttle plasmid pGS284, and sequenced. Plasmid was cointegrated with WT MHV-68 cloned as a BAC in recA+ GS500 bacteria and resolved, and clones containing the insertion were screened by PCR and restriction digestion. Putative positive clones were further amplified, BAC DNA purified, and used for restriction digestion and Southern blot analyses and transfection of cell cultures. The positive BAC/ORF52-null mutant clone (clone 1 in panel B) is designated 52S here. A 1,000-bp fragment of WT ORF52 was cloned into pGS284, cointegrated with G500 bacteria harboring 52S, resolved, and screened to derive the revertant BAC/ORF52R virus, designated 52R. (B) Restriction fragment and Southern analyses of 52S, 52R, and WT(BAC7) clones. BAC DNA was digested with two restriction enzymes: HindIII, to identify the inserted HindIII site in mutant clones and loss of HindIII site in revertant clones, and EcoRI, an unaltered site. Digested DNAs analyzed by ethidium bromide staining (left) and Southern blotting (right) probed with a 700-bp PCR product in the ORF52 locus as a probe (right inset). Molecular mass markers, in kDa, are shown.
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FIG. 4. ORF52 is required for the production of infectious extracellular progeny. (A) 52S virus does not produce significant CPE in transfected cells. 52S, WT(BAC) MHV-68, and 52R BAC DNAs were transfected with high efficiency into 293T cells and imaged after 6 days by light microscopy. 293T, mock-transfected cells. (B) Supernatants of 52S-transfected cultures do not contain plaque-forming virus. Supernatants from BAC-transfected 293T cultures 6 days posttransfection were cleared of large debris by centrifugation (15,000 x g), used to infect BHK cells, and overlaid with methylcellulose media for the plaque assay. Plaques were scored in duplicate. (C) Propagation of 52S by providing FLAG-ORF52 in trans. Supernatants from 52S transfection (lanes 2 and 4), 52C cotransfection (52S plus a FLAG-ORF52 expression construct; lanes 1 and 3), or WT/BAC transfection (lane 5) were collected as described for panel B and used to infect either untransfected 293T cells (lanes 1, 2, and 5) or complementing 293T/f52 cells expressing FLAG-ORF52 (FLAG-52; lanes 3 and 4). Total cell lysates solubilized 4 d.p.i. were probed by Western blotting with anti-gp150, anti-ORF65 polyclonal serum, and anti-FLAG (M2) monoclonal antibody. Molecular mass markers, in kDa, are shown. (D) Recovery of released viral DNA in culture supernatants by propagation of 52S on cells expressing FLAG-ORF52. WT/BAC, 52R, and 52C supernatants (see description for panel B) were normalized for viral DNA content by quantitative PCR and used to infect 293T cells or 293T cells expressing FLAG-ORF52. At time points indicated postinfection (in hours), supernatants were clarified and viral DNA was isolated and quantified by SYBR green q-PCR with primers for MHV-68 ORF57.
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These results suggest that release of virions is recovered in cotransfection of 52S BAC DNA and FLAG-ORF52. Infecting cells exogenously expressing FLAG-ORF52 with this complemented virus (52C) rescues its ability to propagate in tissue culture and provides a source of extracellular, complemented 52C virions for further analyses. The 52S clone, however, does not result in high levels of CPE, suggesting a severe attenuation in the lytic phase. The implication is that ORF52 is required for the release of infectious virions capable of subsequent rounds of infection.
ORF52 is not required for MHV-68 DNA replication. In order to understand the requirement for ORF52 protein to complete the lytic phase of MHV-68 infection, we determined whether ORF52 is required for viral DNA replication. MHV-68 genome replication, like DNA replication by other herpesviruses, is thought to proceed through a rolling circle mechanism with subsequent cleavage of concatemers with different numbers of terminal repeats, followed by packaging into assembled capsids (11, 20, 36, 51). We examined viral DNA replication and processing by use of a terminal repeat assay (51). The accumulation of DNA concatemers with different lengths of terminal repeats indicates that input BAC DNA clones were replicated upon transfection with 52S BAC DNA, similar to the case with 52S-plus-FLAG-ORF52 cotransfection and WT/BAC transfection (Fig. 5A). Thus, ORF52 is required neither for viral DNA replication nor for cleavage of viral DNA concatemers, a prerequisite for packaging the DNA into nucleocapsids.
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FIG. 5. Replication of viral DNA in 52S transfection and 52C infection. (A) Terminal repeat assay. Total DNA was purified from 293T cultures transfected with 52S, 52S-plus-FLAG-ORF52 (FLAG52), or WT/BAC DNA at the indicated time points. BAC DNA was HindIII digested. Southern blots were probed with a PCR-amplified probe to the MHV-68 genomic region adjacent to the terminal repeat, specifying relative replication and terminal repeat cleavage variants. Molecular mass markers, in kDa, are shown. (B) Viral DNA replication measured after infection of NIH 3T3 fibroblasts with WT/BAC, 52R, or 52C trans-complemented virus. Total intracellular DNA purified and viral genome copy numbers were quantified by SYBR green q-PCR with primers for MHV-68 ORF57. Copy numbers are averages of two 96-well-format experiments and duplicate q-PCRs.
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This phenotype contrasts sharply with the lack of extracellular viral DNA accumulation (Fig. 4D), indicating that while 52C infection results in entry and viral DNA replication, rerelease of viral DNA-filled virions is minimal. As viral DNA is replicated, it can be presumed that expression of immediate-early, early, and early-late (
-1) genes required for viral DNA replication and progression through the lytic phase are not significantly affected by the loss of ORF52 protein.
ORF52 is not required for lytic gene expression.
The expression of viral lytic proteins was examined in cells transfected with 52S BAC DNA by probing Western blots with polyclonal anti-MHV-68 serum (Fig. 6A). In cells infected with 52C virus, the lytic phase progressed at least to the production of late lytic antigens, including virion proteins such as ORF65 (capsid) and gp150 (envelope glycoprotein) (Fig. 6B). Though lytic antigen expression does not fully reach WT levels in 52S-transfected (Fig. 5A and 6A) and 52C-infected (Fig. 5B and 6B) cultures, qualitatively, ORF52 is not required for the initiation of late gene expression or for the viral life cycle to proceed to a measurable accumulation of lytic proteins. Similar to viral DNA replication, the lack of further rounds of infection in 52S-transfected and 52C-infected cultures may account for the apparently slower progression. Still, without a functional ORF52 gene, there were significant levels of both viral DNA replication and expression of late lytic genes. Notably, viral DNA replication is required for the efficient expression of a subset of lytic genes (
-2, or true-late genes) encoding virion structural proteins (12, 28). As a true-late gene product, the ORF52 protein likely functions late in the lytic phase, directly or indirectly, in either virion morphogenesis or release.
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FIG. 6. Expression of lytic proteins in the absence of ORF52. Molecular mass markers, in kDa, are shown. (A) 52S exhibits high-level expression of lytic proteins. 293T cell cultures were transfected with WT(BAC), 52S, or 52S-plus-FLAG-ORF52 expression construct (FLAG52) and harvested in PLB at time points posttransfection. Western blots probed with polyclonal anti-MHV68 antisera. (B) Expression of late proteins measured after infection of NIH 3T3 fibroblasts with WT/BAC or 52C trans-complemented virus or infection with mock-transfected 293T supernatant. Cell lysates were solubilized at the indicated time points postinfection in Laemmli buffer, separated by SDS-PAGE, Western blotted, and probed with anti-ORF26 (capsid) and anti-gp150 (glycoprotein) polyclonal antisera. hpi, hours postinfection.
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In WT/BAC, 52S, and 52S-plus-FLAG-ORF52 transfections, herpesvirus capsid species were observed in cell nuclei, consistent with progression to a late stage of the lytic phase (29, 31). Empty or A capsids, as well as B capsids containing a scaffolding protein, and packaged DNA-filled C capsids were visible (Fig. 7, lower panels). In addition, at least the C capsid species in 52S-transfected cells are apparently capable of egress through the nuclear envelope into the cytoplasm. Partially tegumented nucleocapsids associated with electron-dense protein structures could be found juxtaposed to cytoplasmic membranous compartments in 52S-transfected cells (Fig. 7, 52S panel). However, we failed to find fully enveloped virions within cytoplasmic vesicles, or virions associated with or in the extracellular space adjacent to the cellular plasma membrane, as observed for WT/BAC-transfected and complemented (52S-plus-FLAG-ORF52) transfected cells (Fig. 7).
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FIG. 7. Thin-section TEM of WT(BAC), 52S, and 52S-plus-FLAG-ORF52-transfected 293T cells. Approximately 70-nm-thin sections were examined 6 d.p.i. by TEM. Putative A capsid (a), B capsid (b), and C capsids containing packaged viral DNA core (c) were found in WT(BAC), 52S, and 52S-plus-FLAG-ORF52-transfected cell nuclei (Nu). In the cytoplasm (Cy), viral particles include enveloped-tegumented virions in WT(BAC) and 52C transfectants ( ) and partially tegumented capsids in 52S ( ). In the extracellular space, WT(BAC) cultures contained putative egressed virions (V) and noninfectious enveloped particles (NIEPs) and 52S-plus-FLAG-ORF52-transfected cultures contained virions, while no identifiable virions NIEPs were found in 52S cultures. Bars, 200 nm.
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2 = 2.48, relative to WT distribution; P < 0.077). Of all immature, DNA-containing viral particles in the cytoplasm in 52S transfections, approximately 20% appeared to be closely associated with electron-dense proteinaceous structures and cytoplasmic vesicular membranes, possibly arrested in a late stage of virion maturation (Fig. 7, 52S panel). These observations suggest that ORF52 is required to facilitate tegumentation/envelopment of nucleocapsids at a cytoplasmic stage of virion morphogenesis prior to virion egress. |
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TABLE 2. Distribution of viral particles
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FIG. 8. Protein compositions of 52S particles, WT(BAC) virions, and complemented 52C virions. Viral particles were isolated from the supernatants of WT(BAC)- and 52S-plus-FLAG-ORF52-transfected cultures or from 52S-transfected cells. Molecular mass markers, in kDa, are shown. (A) Electron cryomicrograph of WT(BAC) and 52S particles embedded in vitreous ice and imaged at 300 kV on a JEOL JEM1200 (magnification, x30,000; 6 electrons/Å). Representative images are shown. Bars, 100 nm. (B) Virion protein compositions of WT(BAC), complemented 52C, and 52S particles separated by SDS-PAGE, Western blotted, and probed with polyclonal antisera to virion proteins indicated or anti-FLAG monoclonal antibody (M2). (C) Detection of ORF67 protein in 52S particles. WT(BAC), 52C, and 52S particles separated by SDS-PAGE, Western blotted, and probed with polyclonal anti-ORF67 serum. Capsid protein was detected by anti-ORF62 serum. (D) Identification of ORF25 and ORF64 proteins in WT/BAC virions and 52S capsids by mass spectrometry. Proteins in WT(BAC) and 52S particles were separated by SDS-PAGE for band excision, digestion with trypsin, and extraction of peptides for LC/MS-MS analysis.
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Finally, 52S particles and WT/BAC virions were subjected to mass spectrometric analyses to identify high-molecular-mass proteins for which antisera are not available (105- to 270-kDa-mass range) (Fig. 8D). Proteins were separated by SDS-PAGE, SYPRO Ruby stained, and excised for trypsin digestion and extraction of peptides. Peptides were analyzed by LC/MS-MS and identified by using Mascot or Sequest software to search for matches in the predicted MHV-68 proteome (6, 50). Peptides representing the major capsid protein (ORF25) and large tegument protein (ORF64, the HSV-1 UL36 homologue) were identified in both WT/BAC virions and 52S particles (Table 3). These results confirm the presence of all four canonical, conserved gammaherpesvirus capsid proteins (6, 31) in 52S nascent nucleocapsids, providing further evidence that ORF52, while tightly bound to the nucleocapsid, is not required for its formation; moreover, these results suggest that the assembly of ORF64 tegument protein is independent of ORF52.
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TABLE 3. Identification of proteins of a 105- to 270-kDa-mass range in WT and 52S particles
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Partially tegumented virion particles isolated from cells transfected with the MHV-68 BAC ORF52-null mutant clone (52S) morphologically appear similar to nucleocapsids and contain the four conserved capsid proteins required to form the icosahedral herpesvirus capsid, a structure MHV-68 shares with all other herpesviruses (6, 20, 31, 45, 54). The 52S particles also contain at least one tegument protein found in extracellular virions, the conserved ORF64/UL36 homologue (25). Interestingly, the HSV-1 UL36 protein has been shown to have deubiquitinating activity (24); whether this function is conserved in the ORF64 homologue is not known. Another conserved primary tegument protein thought to be involved in egress of nucleocapsids into the cytoplasm, the ORF67/UL34 homologue (15, 29), was also found in association with 52S particles but not WT MHV-68 virions. ORF67 in MHV-68 infection may mimic UL34, which dissociates from capsids in the cytoplasm and is not present in mature, extracellular alphaherpesvirus virions (29). If so, the loss of ORF52 may result in a defect in virion maturation prior to this step or inefficient dissociation of ORF67 from C capsids that have egressed into the cytoplasm. Moreover, 52S particles contain no ORF45, a protein less tightly bound to the nucleocapsid than ORF52 is. As such, 52S particles likely represent an arrested stage of virion morphogenesis, at which nascent nucleocapsids associated with ORF67 and ORF64 have egressed from the nucleus into the cytoplasm. Indeed, immature virions accumulate in the cytoplasm of cells transfected with 52S (Table 2). ORF52 protein appears to be required to efficiently progress through the next stage of virion assembly, i.e., the loss of ORF67 from nascent nucleocapsids, association with outer tegument and glycoproteins required for canonical tegumentation and envelopment (wrapping), and egress from the cell. The existence of distinct, layered subdomains within the MHV-68 tegument has been recently suggested by electron cryotomography (W. Dai and Z. H. Zhou, submitted for publication). Consistent with this proposed function as a tegument protein, MHV-68 ORF52 localizes to the cytoplasm of transfected and infected cells. An EGFP-ORF52 fusion protein localized to the cytoplasm in distinct subcellular structures juxtaposed to the Golgi apparatus-derived network.
How exactly ORF52 functions is unclear. Understanding the mechanism of ORF52's function(s) requires a better understanding of the protein's interactions with other viral proteins and cellular machinery involved in the formation and release of virions from the infected cell. Studies have identified alphaherpesvirus tegument proteins that are specifically required for virion morphogenesis in the cytoplasm, such as pseudorabies virus UL37 (25) and UL48 in both pseudorabies virus and HSV-1 (16, 49). Undoubtedly, other tegument proteins are also involved in these processes. For instance, conserved herpesvirus tegument proteins ORF67/UL34, ORF69/UL31, and ORF64/UL36 have been implicated in the egress of nucleocapsids from the nucleus and capsid transport in the cytoplasm (27, 29). In addition, a number of tegument proteins, including ORF52, are unique to each subfamily of herpesvirus and may have distinct roles in the formation and egress of virions. The complete set of tegument proteins encoded by each herpesvirus genome accomplishes a conserved evolutionary function, facilitating egress and entry of nucleocapsids through the cytoplasm. It has been recently suggested that herpesvirus nucleocapsids and tailed DNA bacteriophages may share a common ancestor (3). In such a scenario, tegument proteins represent a subsequent adaptation to coping with another cellular layer, the cytoplasm, that had engulfed the common ancestor's original host, the primordial nucleus. Subsequent structural and genomic divergence has preserved this essential tegument function yet allowed incorporation of divergent proteins with effects on the infectivity of incoming virions, such as the gammaherpesvirus ORF45 (21, 56) and gammaherpesvirus UL41 virion host shutoff protein (34). In this light, ORF52 protein has an apparently central role in tegumentation and egress and thus is an evolutionary link between the gammaherpesvirus proteome and the host cell.
In summary, we have analyzed the function of the ORF52 tegument protein in the MHV-68 model of the gammaherpesvirus lytic phase. The lytic phase of infection among gammaherpesviruses, such as, for example, KSHV, has been implicated in tumor establishment and progression, as well as reactivation and spread of the virus within patients, from tissues initially infected to B cells or lymphatic epithelial cells (8, 9, 13, 18). Understanding the production of virions is important for understanding the transmission and pathogenesis of these pathogens and developing therapeutic interventions in EBV- and KSHV-associated diseases.
This work was supported by a California Universitywide AIDS Research IDEA award (no. 1122004455), NIH grants CA83525, CA91791, DE14153, and the STOP Cancer Foundation (R.S.); NIH grants AI12601 and AI29733 and DOE DE-FG03-01ER15253 (J.P.W.); NIH grants CA94809 and AI46420 (Z.H.Z.); and the Leukemia and Lymphoma Society (T.-T.W.). E.B. was supported by a UCLA Dissertation Year Fellowship and the Cellular and Molecular Biology Training Grant program at the University of California at Los Angeles (USPHS National Research Service Award GM07185).
Published ahead of print on 18 July 2007. ![]()
Present address: Department of Microbiology, Mount Sinai School of Medicine, New York, NY 10021. ![]()
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B inhibits gammaherpesvirus lytic replication. J. Virol. 77:8532-8540.This article has been cited by other articles:
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