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Journal of Virology, September 2007, p. 9481-9489, Vol. 81, No. 17
0022-538X/07/$08.00+0 doi:10.1128/JVI.00922-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania 15260
Received 30 April 2007/ Accepted 14 June 2007
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The first 70 amino acids of TAg have sequence identity with the J domain of the DnaJ class of molecular chaperones (15). The J domain of TAg binds to hsc70, the major DnaK homologue present in mammalian cells, and stimulates its ATPase activity (34). This interaction results in the release of unfolded peptides from the substrate-binding domain of hsc70 (29). The inactivation of Rb proteins by TAg requires a functional J domain to interact with hsc70 and to release E2Fs from their binding to Rb family members. This release results in the upregulation of E2F transactivation activity and subsequent progression of cells into the S phase.
The residues histidine-proline-aspartate (HPD) are absolutely conserved within the J domain of all known, active DnaJ homologues (28). Substitution mutations in any of these residues render the J domain less able to activate the ATPase activity of hsc70. Studies in cell culture show that the TAg J domain plays a role in transformation. The J domain of TAg cooperates with the Rb binding motif (LXCXE) to inactivate the growth-suppressive functions of p130, p107, and pRb. In cell culture, J-domain mutants are defective for altering p130 and p107 phosphorylation and are unable to degrade p130; however, these mutants do not affect the phosphorylation state of pRb (31). Single-amino-acid-substitution mutants in the J domain, such as H42Q, are unable to disrupt Rb family-E2F DNA binding complexes in mouse embryo fibroblasts (MEFs) (40). Another single-amino-acid-substitution J-domain mutant, D44N, is unable to bind hsc70 and does not disrupt p130-E2F4 complexes (32). On the other hand, D44N induces focus formation and anchorage-independent growth, although at a somewhat reduced frequency compared to wild-type TAg (TAgwt) (9, 24, 31). The TAg J domain confers a growth advantage to normal MEFs but is dispensable in the case of MEFs lacking both p130 and p107 (31). These data indicate that p107 and p130 have overlapping growth-suppressing activities whose inactivation is mediated by the J domain of TAg.
The mouse intestinal epithelium is organized into numerous finger-like projections, the villi, and the structures responsible for their renewal, the crypts of Liberkuhn. The intestinal epithelium contains four types of differentiated cells: enterocytes and goblet, enteroendocrine, and Paneth cells. These cells are derived from a small number of multipotent stem cells that reside near the base of each crypt. These stem cells give rise to a zone of proliferating cells, which differentiate as they migrate towards the luminal surface, with the exception of the Paneth cells, which migrate towards the base of the crypt. As a result, villi are mainly composed of enterocytes with some goblet and enteroendocrine cells. The differentiated cells at the top of villi are then extruded into the intestinal lumen, while Paneth cells are thought to be engulfed by macrophages. Intestinal villi and crypts can be readily separated from extraneous tissue, thus allowing the isolation of proteins or nucleic acids from cell populations greatly enriched for nonproliferating, terminally differentiated cells (villi) or from their proliferating, multipotent progenitors (crypts) (23, 38). Overall, the stratification of proliferation and differentiation along the crypt-villus axis makes the intestine an attractive model system for examining the regulation of mediators of the cell cycle.
Expression of full-length TAg in murine enterocytes results in intestinal hyperplasia that progresses to dysplasia by 4 to 6 months of age (12, 18). The hyperplasia requires TAg action on the Rb family of tumor suppressors, since a mutant TAg that cannot bind Rb proteins exhibits a normal intestine with growth-arrested enterocytes (2). While many studies have shown the effects of full-length TAg as a transgene in different tissues, a limited number of studies have been done on the expression of different TAg mutants (27, 36). Observations in cell culture strongly suggest that the J domain of TAg is required to overcome the p130- and/or p107-mediated repression of E2F-dependent transcription and thus is required for the transformation induced by TAg (39). To determine the J-domain requirements in a normal tissue model, we have generated transgenic mice using the intestinal fatty acid binding protein promoter to direct expression of the D44N TAg mutant (TAgD44N) to villus enterocytes. Our results indicate that an intact J domain is required to induce intestinal proliferation mediated by TAg and suggest that different tissues require different signals to undergo tumorigenic proliferation.
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Immunohistochemistry. Analysis of the proliferative status by incorporation of bromodeoxyuridine (BrdU) has been described by Sáenz Robles et al. (submitted). Detection of TAg proteins was performed in 5-µm-thick histological sections using appropriate dilutions of the anti-TAg antibody PAb419 (11) as the primary antibody and biotinylated anti-mouse-Fab as the secondary antibody, followed by a streptavidin-peroxidase ARK kit plus development of the peroxidase reaction with diaminobenzidine substrate (DAKO), according to the manufacturer's instructions.
Immunoblot analysis. Material enriched in intestinal villi was prepared and analyzed by Western blotting as described elsewhere (23). Appropriate dilutions of the following primary antibodies were used: TAg mouse monoclonal PAb416 (11); anti-pRb-mouse immunoglobulin G (IgG) (G-3245) from BD-Pharmingen; and anti-p130-rabbit IgG (C-20) (sc-317), anti-p107 rabbit IgG (C-18) (sc-318), anti-E2F1 rabbit IgG (C-20) (sc-193), anti-E2F2 mouse IgG1 (TFE25) (sc-9967), and anti-E2F3 rabbit IgG (C-18) (sc-878) from Santa Cruz Biotechnologies. Goat anti-mouse A2554 and goat anti-rabbit A0545 (Sigma) were used as secondary antibodies.
RT-PCR analysis. For reverse transcription-PCR (RT-PCR), whole intestine or intestinal fractions were collected, lysed, and homogenized in buffer containing guanidine isothiocyanate, an RNase inhibitor, and the total RNA was extracted using the RNeasy kit (QIAGEN). One microgram of RNA was reverse transcribed into cDNA using the Superscript First-Strand synthesis kit (Gibco BRL). The cDNAs were amplified with PCR using primers specific for alcohol dehydrogenase (ADH) (5'-TGCACCACCAACTGCTTAG and 5'-GATGCAGGGATGATGTTC), E2F1 (5'-TTGCCTGTCTGTTTGCTGAGCC and 5'-CGGAGATTTTCACACCTTTCCCTG), E2F2 (5'-TTCGCTTTACACGCAGACGG and 5'-AATGAACTTCTTGGTCAGGAGCC), E2F3a (5'-AGCCTCTACACCACGCCACAAG and 5'-ATCCAGGACCCCATCAGGAGAC), RB (5'-TCACACAACCCAGCAGTGCG and 5'-CTATCCGAGCGCTCCTGTTC), p107 (5'-TAGATATCTTTCAAAATCCATATGAAGAGCC and 5'-ATTGTACACCACGACTCC), p130 (5'-TTGGGACTCTGTCTCGGTGTCTAAG and 5'-AATGCGTCATGCTCCAGAACACCAG), and TS (5'-TCAGTTCTATGTGGTGAATGGGG and 5'-TGGGAAAGGTCTTGGTTCTCGC). Primers for b-myb and cyclin El were previously described (37).
To ensure that these reactions were within the linear range of the assay, we optimized the number of cycles required to obtain nonsaturated signals. Exponential amplifications of PCR products were obtained as follows: 2 min at 94°C; a series of 25 cycles at 94°C for 30 s, variable annealing temperatures for 30 s, and 72°C for 30 s; and a final extension step of 5 min at 72°C. The annealing temperatures and product sizes were 60°C and 420 bp for E2F1, 60°C and 289 bp for E2F2, 60°C and 309 bp for E2F3a, 56°C and 270 bp for RB, 57°C and 499 bp for p130, 56°C with a 2-min extension and 2,250 bp for p107, 55.5°C and 235 bp for TS, 58°C and 350 bp for b-myb, and 55°C and 608 bp for cyclin El. The products were resolved on 2% agarose gels and stained with GelStar (BioWhittaker Molecular Applications).
EMSA.
For the electrophoretic mobility shift assay (EMSA), equal amounts of top and bottom strands of a oligonucleotide containing an E2F binding site (5'-ATTTAAGTTTCGCGCCCTTTCTCAA-3') were annealed and 28 pmol of the double-stranded oligonucleotide was then end labeled with [
-32P]ATP as described previously, with modifications (33). To purify the end-labeled oligonucleotide from unlabeled [
-32P]ATP, the oligonucleotide was subjected to centrifugation through Centri-spin TM-20 columns as per the manufacturer's protocol (Princeton Separations). Thirty micrograms of protein extracts with or without antibodies was diluted in gel shift buffer (10 mM HEPES KOH [pH 7.9], 20 mM KCI, 3 mM MgCl2, 0.5 mM EGTA, 0.5 mM dithiothreitol, 0.5 mM phenylmethylsulfonyl fluoride, 0.05% NP-40), plus an additional mixture of 100 mM dithiothreitol, 1.5 mg/ml bovine serum albumin, 50 µg/ml salmon sperm DNA, and 10% glycerol and incubated with 2 µg of labeled probe for 30 min at room temperature. Antibodies used for the supershift assay were pRb mouse IgG (G-3245) (14001A) from BD-Pharmingen and anti-p130 rabbit IgG (C-20) (sc-317), anti-p107-rabbit IgG (C-18) (sc-318), anti-E2F1 mouse IgG2a (KH95) (sc-251) or anti-E2F1 rabbit IgG (C-20) (sc-l93), anti-E2F2 mouse IgG1 (TFE25) (sc-9967) or anti-E2F2 rabbit IgG (C-20) (sc-633), anti-E2F3a rabbit IgG (N-20) (sc-879), anti-E2F3 rabbit IgG (C-18) (sc-878), anti-E2F4 rabbit IgG (A-20) (sc-1082), and anti-E2F5 rabbit IgG (H-ill) (sc-I 699) from Santa Cruz Biotechnologies, Inc. The p130 antibody shows residual cross-reactivity with the p107 protein, therefore partially shifting p107-containing complexes. The samples were then subjected to gel electrophoresis through a nondenaturing polyacrylamide gel (4% bis-acrylamide, 0.25x Tris-borate-EDTA, 0.1% ammonium persulfate, 0.001% TEMED [N,N,N',N'-tetramethylenediamine]) in 0.25x Tris-borate-EDTA running buffer at 4°C for approximately 4 to 6 h. The gel was then dried for approximately 2 h and exposed to film for various lengths of time at –80°C.
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FIG. 1. (A) Expression of both TAgwt or TAgD44N is restricted to villus enterocytes. Intestinal tissues were embedded in paraffin, and 5-µm sections were stained with an anti-TAg antibody. The brown stain reflects the presence of TAg in nuclei. (B) Expression levels of TAg in TAgwt and TAgD44N villus samples. Protein extracts from villi of nontransgenic, TAgwt, and TAgD44N transgenic mice were subjected to immunoblots for TAg. Protein levels of ß-tubulin were used as loading controls.
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FIG. 2. Ectopic proliferation of enterocytes requires a functional J domain. Proliferation in TAgD44N mice is restricted to the crypts as in nontransgenic mice. Intestinal sections stained with anti-BrdU show numerous BrdU-positive cells in villus enterocytes of mice expressing TAgwt, but none was present in the mice expressing TAgD44N or nontransgenic mice.
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FIG. 3. Expression of TAgD44N does not increase intestinal length in mice. The total length of the small intestine in adult male or female mice was measured, and the average length of intestine in each group (control, TAgwt, and TAgD44N) is represented. The error bars indicate the standard deviation in the group. Intestines expressing TAgD44N show similar length to those in control mice.
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FIG. 4. TAgD44N expression in villus enterocytes alters the pRb protein levels but does not affect their transcript levels. (A) Steady-state protein levels of Rb-family members in nontransgenic, TAgwt, and TAgD44N villus samples. Whole-cell extracts from villi of nontransgenic, TAgwt, and TAgD44N transgenic mice as well as knockout (–/–) intestinal controls were subjected to immunoblots for p130, p107, and pRb. Protein levels for ß-tubulin were used as loading controls. (B) Steady-state transcript levels of Rb family members in nontransgenic, TAgwt, and TAgD44N villus samples. cDNAs were reverse transcribed from equal amounts of total RNA extracts and subjected to PCR using specific primers. Transcript levels of alcohol dehydrogenase 5 (Adh5) were used as loading controls.
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TAgD44N affects activator E2F protein levels differentially. Extracts from TAgwt mice show upregulation of all activator E2F (E2F1, E2F2, and E2F3a) protein levels (Sáenz Robles et al., submitted), which in turn activates S-phase genes and induces cell proliferation. To determine the effect on steady-state levels of activator E2Fs in TAgD44N mice, we performed Western blot analysis using intestinal extracts enriched for villus cells (Fig. 5A). We found a modest but consistent upregulation of E2F2 and E2F3a in TAgD44N intestines in comparison to nontransgenic intestines. In contrast, no change in E2F1 protein levels in TAgD44N mice compared to nontransgenic mice was observed.
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FIG. 5. Expression of TAgD44N in villus enterocytes affects activator E2F protein levels differentially without altering their transcript levels. (A) Protein extracts from villi of nontransgenic, TAgwt, and TAgD44N mice were subjected to immunoblot analysis. Nuclear extracts from S-phase-synchronized normal MEFs were used as a positive control for E2F1. Whole-cell extracts from 293 cells overexpressing E2F2 were used as a positive control for E2F2, and whole-cell extracts from mammary gland tumor were used as a positive control for E2F3a. (B) RNA from villi of nontransgenic, TAgwt, and TAgD44N mice was subjected to RT-PCR analysis using specific primers. Transcript levels of Adh5 were used as loading controls.
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TAgD44N is unable to disrupt p130-E2F complexes. Rb proteins exert their effects in part by binding to and regulating the E2F family of transcription factors. To examine the effects of TAgD44N expression on Rb-E2F DNA binding complexes we performed a series of EMSA experiments. A radiolabeled oligonucleotide probe with consensus E2F binding sites was incubated with extracts from nontransgenic, TAgwt, and TAgD44N growth-arrested enterocytes (villi), and the products were resolved on a nondenaturing gel. Antibody supershift experiments were performed to determine which Rb-protein constituted those Rb-E2F DNA binding complexes. We did not observe any differences in DNA binding complexes between nontransgenic and TAgD44N mice, a fact consistent with the normal morphological phenotype observed (Fig. 6). We found three major bands in both nontransgenic and TAgD44N mice. The slowest-migrating band represents a p130-E2F complex. Two faster-migrating bands do not contain Rb proteins and represent E2F4-DNA and E2F5-DNA complexes (data not shown). Additionally, we found a minor slowly migrating band in nontransgenic, TAgwt, and TAgD44N mice that represents a p107-E2F complex. In contrast, no p130-E2F complexes were detected in enterocytes expressing TAgwt. As reported previously, TAgwt induces the formation of Rb-free E2F2-DNA and E2F3a-DNA binding complexes (Sáenz Robles et al., submitted), which are absent in both nontransgenic and TAgD44N mice. Furthermore, supershifts with antibodies against pRb, E2F2, and E2F3a failed to detect any pRb-E2F2 or pRb-E2F3a DNA binding complexes in TAgD44N intestines (data not shown). Thus, despite the modest upregulation in E2F2 and E2F3a protein levels in TAgD44N mice, there is no evidence that the DNA binding activity of these transcription factors is increased.
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FIG. 6. An intact J domain is required to disrupt p130-E2F DNA binding complexes in villus enterocytes. Gel shift analysis with a radiolabeled nucleotide probe containing a consensus E2F binding site was performed on protein extracts isolated from villi of nontransgenic, TAgwt, and TAgD44N mice. The composition of each migrating complex was determined by supershift analysis with specific antibodies. p130, anti-p130; p107, anti-p107.
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FIG. 7. TAgD44N is unable to upregulate E2F target genes in intestinal enterocytes. Steady-state transcript levels of E2F target genes were determined in nontransgenic, TAgwt, and TAgD44N villus samples. cDNAs were reverse transcribed from equal amounts of total RNA extracts and subjected to PCR using specific primers for b-myb, cyclin E, and thymidylate synthase (TS). Transcript levels of Adh5 were used as loading controls.
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FIG. 8. Loss of p130 does not affect the steady-state levels of pRb and E2F family members in TAgD44N; p130–/– mice. Whole-cell extracts from middle intestines of nontransgenic, TAgwt, TAgD44N, and TAgD44N; p130–/– transgenic mice as well as knockout (KO) (–/–) intestinal controls were subjected to immunoblots for p130, p107, and pRb (A) and E2F1, E2F2, and E2F3a (B). Protein levels of ß-tubulin were used as loading controls.
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Different J-domain mutants show different phenotypes in cell culture and thus present a confusing picture about the role of the J domain in transformation. Therefore, we decided to test the requirement for the J domain in a native tissue, namely the small intestine. The TAg J-domain mutant D44N is capable of inducing foci and anchorage-independent growth in cell culture, but, in contrast, we have found that its expression in villus enterocytes does not induce ectopic cell proliferation. The intestines of TAgD44N mice retained normal morphological features in spite of the high levels of transgene expression in several transgenic lines tested. Based on these observations, we conclude that TAg requires a functional J domain to induce enterocyte proliferation and intestinal hyperplasia.
The J domain of TAg is required to inactivate p130. Several cell culture studies have shown that the J domain of TAg cooperates with the Rb binding motif (LXCXE) to inactivate the growth-suppressive functions of p130, p107, and pRb. Unlike TAgwt, J-domain mutants do not alter the phosphorylation of p130 and p107 and are unable to degrade p130 (31). The TAg J domain confers a growth advantage to normal MEFs, but it is dispensable in the case of MEFs lacking both p130 and p107. This indicates that p107 and p130 have overlapping growth-suppressing activities whose inactivation is mediated by the J domain of TAg. In vivo and in vitro studies have shown that the TAgD44N protein is unable to bind hsc70 and does not disrupt p130-E2F4 complexes (32). All of these observations strongly suggest that the J domain of TAg is required to overcome p130- and/or p107-mediated repression of E2F-dependent transcription and thus contributes to transformation induced by TAg. In agreement with the cell culture studies, we found that an intact J domain is required to reduce the p130 protein levels in villus enterocytes (Fig. 4). Our gel shift analysis indicated the presence of intact p130-E2F4 complexes in TAgD44N mice that were completely absent in TAgwt mice (Fig. 6). These observations strongly suggest that TAg requires a functional J domain to downregulate p130.
In contrast, TAgwt is able to increase both the RNA and protein levels of p107 while TAgD44N upregulates only protein levels, suggesting that a functional J domain is required for the upregulation of the RNA levels. However, the increased p107 protein levels in the TAgD44N intestines might be due to decreased turnover or degradation of the protein, resulting in protein stabilization. On the other hand, TAgwt does not affect either the RNA or protein levels of pRb, though expression of TAgD44N results in the accumulation of pRb protein, perhaps through alterations in the turnover rate. At this point, we do not know the details of either mechanism or if TAg requires interaction with other cellular factors to modify the pRb proteins.
A functional J domain is required for the induction of activator E2Fs. Transgenic mice expressing TAgwt in villus enterocytes upregulate protein and mRNA levels of all activator E2Fs (E2F1, E2F2, and E2F3a) (Sáenz Robles et al., submitted). This activation in turn induces cell proliferation and results in intestinal hyperplasia. Consistent with the normal morphology observed for TAgD44N mice, we did not find upregulation of E2F1 and found only a modest increase in E2F2 and E2F3a protein levels. The protein levels of E2F2 and E2F3a in TAgD44N mice were higher than those in nontransgenic mice but significantly lower than those in the TAgwt mice, and therefore they might be insufficient to induce enterocyte proliferation. Furthermore, we were unable to detect Rb-free E2F2 or E2F3a activity by gel shift analysis. Additionally, the transcripts of several E2F-targeted genes were unaffected, indicating no activation of the pathway (Fig. 7). These results indicate that the E2F2 and E2F3a protein found in TAgD44N enterocytes is not active transcriptionally.
Loss of p130 alone is not sufficient to induce intestinal hyperplasia. Mice with null mutations in either p107 or p130 are viable and normal in certain genetic backgrounds, implying that loss of p130 or p107 alone is not sufficient to induce hyperplasia (5, 22). However, mice lacking both p107 and p130 die at birth (19, 20), suggesting that p107 and p130 perform overlapping functions. It has been shown that the inactivation of pRb in conjunction with either p130 or p107 in villus enterocytes is sufficient to cause intestinal hyperplasia (10). In agreement with these observations, our results show that loss of p130 is insufficient to induce intestinal hyperplasia. At present, we cannot assess the combined effects of a J domain and pRb in induction of hyperplasia because Rb–/– mice are embryonic lethal by day 13.5 (4, 14, 21). Future studies will require a conditional Rb knockout in a TAgD44N background. Similarly, elucidation of the role of p107 will require analysis of TAgD44N mice in a p130+/–; p107–/– background. These goals represent future efforts in the lab.
Animal studies using various J-domain mutants suggest that the requirement for the J domain in transformation is cell-type and context specific. Although defective in cell culture, the J domain dl1135 mutant (lacking small t expression) specifically induced the transformation of T lymphocytes in mouse. However, the same mutant was not able to transform B lymphocytes, suggesting a cell-type-specific requirement of J domain for the transformation (36). Similarly, our study also suggests the requirement for the J domain in the induction of intestinal hyperplasia. At this point, we cannot exclude the role of small t antigen J domain in the transformation process. To our knowledge, only one other study has used a J domain mutant of TAg in another transgenic system (27). However, the requirement for the J domain alone in the development of tumors was not addressed.
Several possible explanations could contribute to the differences between the phenotype observed upon expression of TAgD44N in cell culture and in our transgenic system. On one hand, the cell culture does not represent real in vivo conditions. Additionally, the MEFs used in most of the cell culture studies are derived from a tissue different from intestine. The differences observed between both experimental systems support the notion of tissue-specific requirements for the J domain. Since TAg encodes multiple transformation-related activities, the subset of TAg functions needed and the corresponding target proteins could differ among tissue and/or cell types.
In conclusion, our studies indicate how different consequences are produced upon the same oncogenic stimulation, depending on the system used, and state the need to evaluate molecular pathways in a cell-specific context. This is also the first animal study that shows the requirement for a J domain in the induction of E2F-dependent transcription.
This work was supported by National Institutes of Health grant CA09895 to J.M.P.
Published ahead of print on 20 June 2007. ![]()
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