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Journal of Virology, June 2007, p. 5749-5758, Vol. 81, No. 11
0022-538X/07/$08.00+0 doi:10.1128/JVI.02835-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Section of Comparative Medicine,1 Department of Pathology,2 Yale Cancer Center,3 Yale Skin Disease Research Center,4 Epidemiology and Public Health, Yale University School of Medicine, New Haven, Connecticut 065205
Received 4 January 2007/ Accepted 12 March 2007
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A promising new approach to vaccine development uses attenuated recombinant vesicular stomatitis viruses (VSVs) as vaccines (reviewed in reference 26). Compared to other viral vectors, the VSV vector offers several advantages. It is replication competent, like the most effective human vaccines, but is not a human pathogen. It induces strong cell-mediated and humoral immune responses comparable to those elicited by wild-type VSV (reviewed in reference 30). Additionally, most human populations are seronegative for VSV (30) and therefore susceptible to VSV-based vaccination. The ability of VSV-based vaccines to protect against a subsequent challenge has been shown in a variety of animal models of human viruses, including the cottontail rabbit papillomavirus (CRPV)-rabbit model of high-risk HPV infection (6, 8, 18, 25, 27, 28, 31, 34, 35). We recently demonstrated the ability of VSV-based vaccination to induce immunotherapeutic responses in the CRPV-rabbit model. That study showed that VSV-based vaccines expressing the CRPV E6 protein significantly reduced papilloma growth and eradicated all papillomas in some rabbits (3). The present study extends those findings.
Four early papillomavirus genes are good targets for therapeutic vaccination: the E1 gene, required for DNA replication; the E2 gene, required to enhance DNA replication and to regulate the E6 and E7 promoter; and the E6 and E7 oncogenes (reviewed in references 22 and 37). All four are constitutively expressed in most high-risk papillomavirus lesions, which are premalignant. In addition, the viral E6 and E7 oncogenes are retained and constitutively expressed in all papillomavirus-associated cancers. Numerous immunization strategies targeting the E6 and/or E7 proteins have been evaluated (reviewed in reference 29), but the relative efficacy of targeting of E6 versus E7 has been evaluated in only two studies, using the CRPV-rabbit model (11). One study found no significant difference between E6 and E7 targeting to induce resistance against a subsequent CRPV challenge (22), while the other found that targeting of E7 was superior in preventing malignant progression in papilloma-bearing rabbits (11). Other studies have evaluated vaccines targeting the E1 and/or E2 proteins (4, 10, 15, 17, 36). Again, the relative efficacy of E1 versus E2 protein targeting has only been examined in two studies (21, 36). Both of these studies found no significant difference between vaccines targeting E1 versus E2 when administered prior to CRPV infection.
In the present study, VSV-based vectors individually expressing the CRPV E1, E2, and E7 proteins were generated and compared to a previously generated VSV-E6 vaccine (3) for therapeutic efficacy against CRPV-induced rabbit papillomas. Because multicomponent vaccines may elicit broader arrays of immune responses than individual vaccines, they may increase vaccine efficacy, especially among genetically heterogeneous populations such as rabbits and humans. We therefore compared the efficacy of treating rabbits with each vaccine individually with that of using each possible pairing of vaccines and analyzed the data for differences in cumulative papilloma volumes and in the frequency of papilloma regression.
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TGC). Recombinant VSV recovery. Recombinant E1 VSV, E2 VSV, and E7 VSV were recovered as described previously (20). Briefly, BHK cells were infected with recombinant vaccinia virus vTF7-3 expressing T7 RNA polymerase. Each recombinant VSV plasmid, together with support plasmids pBS-N, pBS-P, and pBS-L under the control of T7 promoters, was transfected into vaccinia virus-infected cells. After 2 days, the supernatants were collected, filtered through a 0.2-µm-pore-diameter filter, and passaged onto fresh BHK-21 cells. The medium was collected and filtered again through a 0.1-µm-pore-diameter sterile filter. Recombinant VSVs were plaque purified and grown, and their titers were determined. Recombinants were thawed and diluted with Dulbecco modified Eagle medium to the appropriate concentration immediately before inoculation.
Production of recombinant His-tagged CRPV E1 and E2 proteins and E1- and E2-specific antisera.
His-tagged CRPV E1 and E2 protein expression vectors were constructed in pET-29a. The full-length E1 and E2 genes were first amplified by PCR from CRPV-pLAII with PCR primers E1HisC (5' GCG CTG ACC ATG GCT GAA GGT ACA GAC CC) and E1HisN (GCG CTG ACT CGA GTA GAG ACT GAG AAG TTC C) for E1 and primers E2HisC (5' GCG CTG ATC ATG ATC GAG GCT CTC AGC CAG CG) and E2HisN (5' GCG CTG ACT CGA GAA GCC CAT AAA AAT TCC C) for E2. The PCR fragments were cleaved with NcoI and XhoI (for E1) or BspHI and XhoI (for E2) and ligated to the corresponding sites of pET-29a to generate His-tagged fused genes. Clones with the correct restriction endonuclease patterns were isolated from the DH5
strain of Escherichia coli and transferred to the NovaBlue strain for recombinant protein production. Isopropyl-ß-D-thiogalactopyranoside (IPTG) was used to induce protein expression, and 6 M guanidinium chloride was used to lyse the cells. The lysates were individually loaded onto an Ni-nitrilotriacetic acid agarose column (QIAGEN) and eluted with 0.25 mM imidazole (Sigma). Fractions containing the highest concentrations of protein were dialyzed against Tris-buffered saline (Sigma) and pooled. Protein concentrations were determined by the Bio-Rad protein assay (Bio-Rad Laboratories).
Four 8-week-old female Hartley guinea pigs (Charles River, Wilmington, MA) were inoculated subcutaneously with 70 µg of recombinant E1 or E2 protein per immunization. Freund's complete and incomplete adjuvants were used for priming and boosting, respectively. Guinea pigs were immunized four times at approximately 3-week intervals. The guinea pig sera were tested for E1 or E2 specificity in Western blot assays with purified recombinant E1 or E2 protein, respectively.
Immunofluorescent microcopy. BHK-21 cells were infected with each VSV recombinant or the recombinant wild-type VSV (VSV-rwt) vector. Cells were fixed in 3% paraformaldehyde for 30 min and then permeabilized with phosphate-buffered saline-glycine(1% Triton X-100) for 5 min. After washing, the cells were stained with a 1:100 dilution of primary antiserum produced in guinea pigs (anti-E1 and -E2, this study) or rabbits (anti-E6 and -E7) (38, 40). As secondary antisera, a fluorescein isothiocyanate-conjugated goat anti-guinea pig immunoglobulin G (IgG) antiserum (Antibodies Inc.) was diluted 1:200 and an Alexa Fluor 488-conjugated goat anti-rabbit IgG (HPV+L) antiserum (Invitrogen) was diluted 1:250. Photographs were taken on a Nikon Microphot FX microscope equipped with a 40x Planapochromat objective, epifluorescence, and a SPOT digital camera.
Western blotting. BHK-21 cells were mock infected or infected with VSV-rwt, VSV-E1, or VSV-E2 as described above. Cells were lysed in Laemmli buffer containing 5% ß-mercaptoethanol and 2% sodium dodecyl sulfate (SDS), and the DNA was sheared with a 27-gauge needle. Proteins were separated by 12% SDS-polyacrylamide gel electrophoresis (PAGE) and transferred to an Immun-Blot polyvinylidene difluoride membrane (Bio-Rad) in a Mini Trans-Blot electrophoretic transfer cell (Bio-Rad). The blot was probed with guinea pig anti-E1 or anti-E2 antiserum at a dilution of 1:1,500, followed by horseradish peroxidase-conjugated anti-guinea pig serum (Kirkegaard & Perry Laboratories, Inc.) at a dilution of 1:5,000. The blot was developed with Western Lighting Chemiluminescence Reagent Plus (Perkin-Elmer Life and Analytical Sciences, Inc.) and exposed to Kodak BioMax MR film (Kodak).
Metabolic labeling, immunoprecipitation, and SDS-PAGE. BHK cells were mock infected or infected with VSV-rwt, VSV-E6, or VSV-E7 as described previously (3). After 5 h, the cells were incubated in Dulbecco modified Eagle medium containing 100 µCi of [35S]cysteine for 1 h and then lysed as described previously (3). The CRPV E6 and E7 proteins were immunoprecipitated from the lysates with rabbit anti-E6 (40) and anti-E7 (38) antisera at a dilution of 1:100, and the proteins were separated by 15% SDS-PAGE as described previously (3).
CRPV infection of rabbits. Two-kilogram female New Zealand White Pasteurella-free rabbits (Charles River, Wilmington, MA) were maintained in the animal facilities at the Yale University School of Medicine. All experiments were performed in accordance with procedures approved by the Yale Institutional Animal Care and Use Committee. Thirty-six rabbits were infected with CRPV at nine cutaneous sites on the right flank as described previously (40). Briefly, three sites were infected with 10 µl of a 1:30, 1:150, or 1:750 dilution of the K216 stock of CRPV (39).
VSV vaccination. Immediately prior to vaccination, rabbits were anesthetized by intramuscular injection of Acepromazine (35 mg/kg) and fur was clipped from the shoulder. The shoulder was then inoculated intradermally with a dose of 4 x 107 PFU VSV in 0.4 ml cell culture medium or with 0.4 ml cell culture medium alone at approximately 20 adjacent sites on the shoulder. When pairs of vaccines were administered, they were mixed prior to inoculation and a half dose of each component was used.
Collection of clinical data.
Rabbits were examined by visual inspection and palpation after clipping the fur 18, 21,26, 32, 39, 46, 54, 62, 68, 75, and 82 days after CRPV infection. At each examination, the numbers, locations, and dimensions of papillomas were recorded in millimeters (length, width, height). Papilloma volumes were calculated in cubic millimeters by using the formula for an irregular sphere, the shape of papillomas, i.e., 4/3 x
x length/2 x width/2 x height/2.
VSV-neutralizing antibody titers. Neutralization assays were performed as previously described to detect antibodies that neutralize VSV (Indiana serotype) by binding to the VSV G protein (24).
ELISAs. Enzyme-linked immunosorbent assay (ELISA) plates were coated with 200 ng of recombinant CRPV protein E1, E2 (this paper), E6 (40), or E7 (38). Positive control antisera were described previously (4). Negative control sera were from preimmune rabbits. Test sera were collected 10 weeks after vaccination. The test and negative control sera were assayed at 1:40 to 1:320, and the positive control sera were assayed at 1:100 to 1:12,800 (for E1 and E2) or 1:100 to 1:6,400 (for E6 and E7), by using serial twofold dilutions. Serum samples with undetectable responses at the 1:40 dilution were designated negative.
Statistical analyses. The efficacy of each treatment was summarized by using cumulative papilloma volumes at each CRPV infection site as the primary outcome measurement. For sites where no papilloma was detected, a volume of 0.00065 mm3 was used to enable analysis of the log volumes. This is the theoretical volume of the smallest papilloma recorded (5 by 5 by 5 mm), divided by 105, 10 times the minimum number of cells estimated to allow clinical detection. The cumulative volume was calculated by using the trapezoidal rule for the area under the curve generated by plotting the volume at each site over time. Analyses of volume effects used log volumes because of the highly skewed values but are presented in the original linear scale. The distribution of the cumulative papilloma volumes was heteroscedastic, so the conventional parametric analysis of variance (ANOVA) was not applicable. Instead, the volume data were analyzed by using rank-score tests in factorial designs following the nonparametric approach of Brunner et al. (5). The raw data were ranked and modeled with the PROC MIXED procedure of SAS version 9.1 with an unconstrained within-animal covariance structure.
The effects of the CRPV dose on papilloma frequency and regression frequency were analyzed by chi-squared tests and logistic regression. Complete papilloma regression was defined as the disappearance of all lesions, and partial regression was defined as the disappearance of at least one papilloma but not all of the papillomas. The effect of the dose on the time to first detection of a papilloma (by visualization and palpation) was analyzed by both unpaired Student's t tests for two samples of unequal variance and logistic regression models.
The correlation between VSV-specific neutralizing antibody titers and cumulative papilloma volumes was described by the Pearson correlation coefficient. Differences in the frequency of papilloma regression, defined as the complete disappearance of a papilloma, were analyzed by the Cochran Armitage trend test. The responsiveness of rabbits to vaccination according to the dose of CRPV used for infection was tested by a latent parametric model.
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FIG. 1. The VSV cloning vector. The genome of the parental VSV-rwt vector is diagrammed in a 3'-to-5' orientation on the negative-stranded viral RNA genome. Letters refer to the VSV nucleocapsid (N), phosphoprotein (P), matrix (M), glycoprotein (G), and RNA-dependent RNA polymerase (L) genes. The CRPV genes were inserted into position 5 of the VSV genome, between the G and L genes, and expressed by duplication of the VSV start and stop signals.
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FIG. 2. Detection of the VSV-encoded E1, E2, E6, and E7 proteins. (A) BHK cells infected with VSV-E1, VSV-E2, VSV-E6, VSV-E7 (top row), or VSV-rwt (bottom row). Cells in both rows were stained with a primary antiserum corresponding to the protein encoded by the vector and a secondary antiserum against guinea pig IgG (to detect E1 and E2) or rabbit IgG (to detect E6 and E7). The exposure times for the controls were identical to the exposure times for the experimental cells. (B) SDS-polyacrylamide gel showing the purified recombinant His-tagged E1 and E2 proteins (lanes 1 and 2, respectively) used to generate the guinea pig antisera to E1 and E2. (C and D) BHK cell lysates infected with VSV-E1 (C1), VSV-E2 (C2), VSV-E6 (D1), and VSV-E7 (D2) and processed for Western blotting (C1 and C2) or immunoprecipitation (D1 and D2). The lanes in panels C and D contain lysates of BHK cells that were mock infected (lane 1) or infected with VSV-rwt (lane 2) or a VSV-CRPV recombinant virus (lane 3). In each panel, the band corresponding to the CRPV protein is labeled with its name.
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TABLE 1. Experimental design used in this study
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TABLE 2. Effect of CRPV dose on papilloma outcome
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TABLE 3. VSV-neutralizing antibody titers
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FIG. 3. Nonnormal distribution of the raw data. The plot shows cumulative papilloma volumes according to the dose of CRPV used for infection and the VSV recombinants used for vaccination. Each box contains 50% of the data. The vertical lines show the top (above the box) and bottom (below the box) 25% of the data. The horizontal line within each box shows the median value. Med, medium; Vec, vector.
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TABLE 4. Cumulative papilloma volumes in rabbits treated with VSV-based CRPV vaccine(s)
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TABLE 5. Analysis of treatment effects on cumulative papilloma volumes
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0.01) (Table 5). Potential reasons for this outcome are discussed below. The data were further analyzed to determine whether VSV-based vaccination was more effective against smaller versus larger papillomas, i.e., induced by lower versus higher doses of CRPV. Such a possibility was suggested by the data shown in Table 4. However, when analyzed statistically, the difference in reduction percentages (mean volume of the CRPV VSV vaccinees/mean volume of the controls) according to the CRPV dose administered was not significant (P = 0.28).
Effects of vaccination on papilloma regression. The ultimate goal of therapeutic vaccination is a complete clinical response, which for papillomavirus-induced disease means the elimination of all viral lesions (complete regression). Within the time frame of the main experiment, VSV-based CRPV vaccination induced the regression of 36/255 papillomas in the vaccinees versus 0/53 in the controls (P = 0.001). Most regressions occurred in four rabbits that showed complete papilloma regression, i.e., one treated with VSV-E2 alone, one treated with the VSV-E2-VSV-E6 pair, and two treated with VSV-E7 alone (Table 6). Many fewer regressions occurred in the four rabbits with partial regression (Table 6). Further analysis showed that regression occurred significantly earlier among papillomas induced by the low versus higher doses of CRPV, i.e., 34.5 ± 2.8 versus 47.2 ± 3.3 days after vaccination, respectively (mean ± standard error of the mean [SEM]) (P = 0.020). Additionally, among the partial regressors, six of the seven papillomas that regressed were induced by the low CRPV dose (P < 0.001). In summary, papillomas induced by the low CRPV dose regressed more rapidly than other papillomas among all regressors and more frequently among partial regressors.
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TABLE 6. Frequency of papilloma regression 11 weeks after vaccination
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Photographic documentation of the time course of papilloma growth versus regression shows two rabbits with multiple papillomas 25 days after vaccination (Fig. 4A). In one (control) rabbit, papillomas continued to grow (top), whereas in the other (regressor) rabbit, papillomas diminished in size on day 33 and disappeared on day 48 (bottom). A plot of the kinetics of papilloma growth versus regression shows that papillomas in all five regressors began diminishing in volume 4 weeks after treatment, i.e., relatively rapidly after treatment (Fig. 5). Regression was complete after 6 weeks in the VSV-E2-VSV-E6 vaccinee, 9 weeks in the VSV-E2-alone vaccinee, and 7.8 or more than 11 weeks in the three VSV-E7 vaccinees. The rabbit that developed the largest papillomas also was the one that took the longest for complete regression.
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FIG. 4. Clinical aspects of papilloma regression. (A) Time course of papilloma growth in a control rabbit (top) versus papilloma regression in a regressor rabbit (bottom). The photographs were taken 25, 33, and 48 days after vaccination. The sites to the left, middle, and right of each photograph were infected with 1:750, 1:150, and 1:30 dilutions of CRPV, respectively. Rabbit fur was clipped prior to photography. (B) Clinical status of one control and the five complete-regressor rabbits, labeled with the treatment they received. The photographs were taken at the end of the main experiment. The last rabbit (lower right) shows papillomas during active regression; the arrow marks the only papilloma of substantive size involuting at the base.
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FIG. 5. Kinetics of papilloma growth and regression in the regressors. Mean papilloma volumes per rabbit are shown for a representative control rabbit (Control) and the five complete regressor rabbits treated with VSV-E7 alone (E7), VSV-E2 plus VSV-E6 (E2+E6), or VSV-E2 alone (E2). Panels A and B show the same data on different scales.
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Effects of vaccination on CRPV-specific humoral immunity. ELISAs were performed to determine whether the VSV-based vaccination elicited antibody responses to the CRPV E1, E2, E6, and/or E7 proteins and, if so, whether they correlated with papilloma volumes. E1-specific antibodies developed in 6/12 VSV-E1-immunized versus 4/24 other rabbits (P = 0.035), with a mean reciprocal titer of 192 ± 30 for all seropositive rabbits (mean ± SEM). E2-specific antibodies developed in 7/12 VSV-E2-immunized rabbits versus 5/24 other rabbits (P = 0.024), with a mean reciprocal titer of 73 ± 13 for all seropositive rabbits. These results show that CRPV infection itself was sufficient to elicit antibody responses to E1 and/or E2 in some rabbits, although the frequency of responding rabbits was significantly increased by VSV-E1 or VSV-E2 vaccination, respectively. The results also show that the titers of antibodies to E1 and E2 were universally quite low. Further analysis showed no correlation between E1/E2-specific humoral immunity and papilloma volumes. Antibody responses to the E6 and E7 proteins were virtually absent, except in one E7 vaccinee and one control, which each developed a 1:80 titer of antibody to E7. Taken together, these results indicate that therapeutic immunity was not mediated by antibody responses to any of the vaccine targets.
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Each of the VSV-based vaccines targeting the CRPV E1, E2, E6, or E7 protein significantly reduced the cumulative papilloma volumes in rabbits immunized 1 week after CRPV infection, relative to inoculation with the VSV-rwt vector or cell culture medium alone. One vector (VSV-E6) was previously shown to reduce papilloma growth by 54% relative to that in control rabbits, and it performed similarly in the present study, reducing papilloma volumes by 55% overall (Table 4). VSV-based CRPV vaccination also cured all papillomas in 5 of 30 rabbits, i.e., 4 within 9 weeks of vaccination and 1 after 18 weeks. We cannot rule out the possibility of additional cures in other rabbits had they been held longer than 18 weeks. Smaller papillomas tended to undergo larger percent reductions in volume than larger papillomas, but this effect did not reach statistical significance. On the other hand, smaller papillomas regressed significantly more rapidly and more frequently than larger papillomas. These results suggest that the ultimate success of a therapeutic HPV vaccine will partly depend on the size of the lesions being treated.
By virtue of inducing immune responses to a broader array of antigens, multicomponent vaccines have the potential to be more effective than single-component vaccines. This potential is not always realized, however, and in a previous study we found that prophylactic vaccination of rabbits with a pair of DNA vectors individually encoding the CRPV E6 or E7 protein was less effective than vaccination with either vector alone (21). In the present study, we did not detect a synergistic benefit of pairing the VSV-E6 vaccine with either the VSV-E1 or the VSV-E2 vaccine, although the effects may have been additive. In contrast, we detected significantly negative synergy for four of the six vaccine pairs, including all pairs containing VSV-E7.We do not know why the paired vaccines did not show positive synergy. Possibly, the levels of CRPV protein-specific immunity induced by the two half doses of vaccine were below a threshold required for optimal therapeutic efficacy, in which case increased dosing might prove beneficial. Alternatively or in addition, reduced efficacy may have resulted from antigenic competition among the antigens of coexpressed CRPV proteins. Several mechanisms for antigenic competition have been described, including competition for antigen uptake by antigen-presenting cells (APCs), competition of APCs for (in this case) T-helper type 1-related cytokines, and competition of T cells, including T regulatory cells, for physical access to limited numbers of APCs (16, 19, 41). Future studies could determine whether superior efficacy could be achieved by vaccinating different sites with different VSV-based CRPV vectors to avoid antigenic competition, as in other studies (33). More importantly, the results show that multicomponent vaccines are not necessarily superior to single-component vaccines and that the two strategies should be directly compared prior to proceeding with a combined vaccine.
Three findings suggest that the VSV-E7 vaccine was superior to the other vaccines; i.e., it induced by far the greatest reductions in papilloma volumes; its efficacy was significantly impaired when it was combined with VSV-E1, VSV-E2, or VSV-E6; and it eliminated all disease in three of three vaccinees when used alone. Nevertheless, the effects of VSV-E7 on papilloma volumes were not significantly different from the effects of the other vaccines. Additionally, only three rabbits were treated with each vaccine pair, making analysis of the pairing effects more sensitive to individual differences among the rabbits than analysis of the effects of VSV-E1, VSV-E2, VSV-E6, and VSV-E7. Indeed, genetic polymorphisms in the major histocompatibility complex locus affect the presentation of various proteins to T cells and certain major histocompatibility complex class II alleles have been linked to spontaneous papilloma regression versus progression in rabbits (9). Other genetic factors must also have controlled immune responses, and yet others must have controlled the relative susceptibility of different rabbits to CRPV-induced disease. Understanding the role of the cellular immune response in tumor clearance will require the development of quantitative assays for cellular immunity in the rabbit model.
Taken together, our results provide a solid foundation for the use of VSV-based vectors as therapeutic vaccines. The ability to reduce papilloma volumes is of considerable value because smaller lesions will be easier to treat by complementary modalities. They also will progress to carcinoma less frequently and less rapidly than larger lesions (32; unpublished data). Finally, the ability of VSV-based vaccination to induce complete papilloma regression in a physiologically relevant animal model of tumorigenesis (this study and reference 3) demonstrates that VSV-based vectors deserve serious consideration for the further development of therapeutic anti-tumor vaccines against other tumors, as well as those associated with HPV infection.
Published ahead of print on 28 March 2007. ![]()
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