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Journal of Virology, July 2006, p. 7079-7088, Vol. 80, No. 14
0022-538X/06/$08.00+0 doi:10.1128/JVI.02380-05
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Center for Molecular Biology of Oral Diseases, College of Dentistry (M/C 860), University of Illinois at Chicago, 801 South Paulina Street, Chicago, Illinois 60612,1 School of Dentistry, University of California at Los Angeles, 53-038 CHS, 10833 Le Conte Ave., Los Angeles, California 900952
Received 11 November 2005/ Accepted 2 May 2006
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The transforming activity of E7 is associated with its ability to interact with the retinoblastoma tumor suppressor protein Rb and its ability to induce proteolysis of Rb through the 26S proteasome (3, 5, 16, 31, 43). One of the major biochemical functions of Rb is to form repressor complexes with the E2F family transcription factors and to repress expression of the replication and cell division genes (reviewed in references 9 and 19). E7 converts the repressor form of E2F (Rb/E2F) to the activator form (E2F). The E7-mediated conversion of E2F to the activator form stimulates the expression of DNA replication enzyme genes, which allows E7 to reactivate cellular DNA replication in differentiated epithelial cells (reviewed in references 27 and 30).
The requirement for a differentiated layer has made it difficult to study the productive life cycle of HPVs. The proliferating keratinocytes are located in the basal layer in contact with the extracellular matrix glycoproteins in the basement membrane. Keratinocytes leave the basal layer to undergo a series of biochemical and phenotypic changes that constitute the differentiation program. Since the movement away from the basement membrane is associated with the initiation of the differentiation process, historically, suspension of keratinocytes has been used as a method of triggering differentiation (17). The HPV-containing epithelial cells express the early differentiation markers, involucrin, and different cytokeratins within 24 h of growth in methylcellulose-containing culture (12, 35). Many events of the HPV life cycles, including expression of differentiation-specific viral promoters, differentiation-dependent viral-genome amplifications, and viral DNA replication, could be efficiently achieved within 24 to 48 h of growth in methylcellulose-containing medium (6, 11, 12, 21, 35, 39, 40). However, the final steps of virus life cycles, including the production of infectious viral particles, could not be achieved in the methylcellulose culture system (35). The organotypic raft culture system is the only in vitro system that allows late-stage differentiation for production of limited amounts of infectious viral particles from the HPV-infected cells. Therefore, differentiation in methylcellulose-containing (1.6%) semisolid medium has been extensively used for analysis of HPV promoters and enhancers, HPV DNA replication, gene expression, and late protein synthesis.
Previous studies in our laboratory and by other research groups showed that the HPV16 E7 protein has a short half-life and the level of E7 in tumor cells is regulated primarily through proteolysis by the ubiquitin proteasome (16, 34, 43). E7 plays a critical role in the replication of HPVs in differentiated cells. However, how E7 expression is regulated during differentiation is currently unknown. In this study, we observed a sustained induction of E7 protein during differentiation in semisolid methylcellulose-containing medium. We show that the increased expression of E7 is due to enhanced translation of the E7 mRNA in differentiated cells.
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Antibodies and chemicals. [35S]methionine-cysteine was from ICN. m7GTP-Sepharose, rapamycin, and MG132 were from EMD Bioscience Calbiochem. The following antisera were from Cell Signaling Technology: eIF4E, phospho-eIF4E (Ser209), 4E-BP1, and phospho-4E-BP1 (Ser65). The E7 antibody (ED17), p27 antibody (C-19), and pan-cytokeratin (C11) antibody were from Santa Cruz Biotech. Unless otherwise stated, all chemicals were from Sigma.
RNase protection assay. Total RNA was isolated from Caski, BaP-T, and HOK-16B cells with an RNeasy kit (QIAGEN, Valencia, Calif.). The entire HPV16 E7 open reading frame (ORF) was subcloned in pGEM 4. For generation of the antisense E7 probe, pGEM-E7 plasmid was linearized with EcoRI and transcribed in vitro with SP6 polymerase and 32P-labeled UTP. For generating the antisense Skp2 probe, a BamHI-KPN1-digested Skp2 cDNA fragment was subcloned into pcDNA3, linearized with XbaI, and transcribed in vitro with T7 polymerase. The cyclophilin-human antisense control template was obtained from Ambion, Inc. and was transcribed with SP6 RNA polymerase. Five to 10 micrograms of total RNA was hybridized to the 32P-labeled antisense-HPV16 E7 probe, 32P-labeled antisense human Skp2 probe, or 32P-labeled antisense-human cyclophilin probe at 60°C for 16 h. The hybridization mixture was digested with RNase A and T1. The products were then separated on a denaturing sequencing gel (4% acrylamide) and visualized by autoradiography. The percentages of E7 mRNA were quantified by phosphorimaging (Molecular Dynamics).
Polysome fractionation and RNA analysis. The cells were grown either as a monolayer or in methylcellulose-containing medium for 14 h. Isolation of polysomal RNA by sucrose gradient (15 to 40%) fractionation was performed following a previously described procedure (23). Briefly, cells were incubated at 4°C for 15 min in buffer A containing 10 mM Tris-HCl (pH 8.0), 140 mM NaCl, 1.5 mM MgCl2, 0.5% NP-40, 20 mM dithiothreitol, 150 µg/ml cycloheximide, 1 mM phenylmethylsulfonyl fluoride (PMSF), and 500 units/ml of RNasin. The cells were then homogenized with 15 strokes of a Dounce homogenizer and the nuclei were removed by spinning at 1,000 x g for 10 min. The supernatant was supplemented with 665 µg/ml of heparin and centrifuged at 12,000 x g for 5 min to remove mitochondria. A sucrose gradient (15 to 40%) was prepared in buffer A. Postmitochondrial extract (200 µl) was layered on the top of a 4-ml gradient and centrifuged in an SW60 Ti rotor at 40,000 rpm for 90 min. Nine fractions (450 µl) were collected and digested with proteinase K (80 µg) in 1% sodium dodecyl sulfate (SDS) for 15 min at 37°C. RNA was isolated from individual fractions by phenol-chloroform extraction. The RNA was analyzed by electrophoresis on a 1.2% formaldehyde agarose gel and stained with ethidium bromide to visualize the distribution of subpolysomal and polysomal RNA. Fractions 1 to 4 contained mostly subpolysomal RNA, and fractions 5 to 9 contained predominantly polysomal RNA. RNA from each fraction was analyzed for E7 mRNA and Skp2 mRNA by RNase protection assay as described above. The percentages of the E7 mRNA bound to polysomes were quantified by phosphorimaging (Molecular Dynamics).
Pulse-chase analysis using [35S]methionine-cysteine. The Caski cells were grown as a monolayer or in methylcellulose-containing medium for 14 h. The cells were labeled with [35S]methionine-cysteine (ICN) for 2 h in methionine-free medium and then chased in medium containing 200 mg/ml of cold methionine. Cells harvested at different times were lysed in radioimmunoprecipitation assay (RIPA) buffer (50 mM Tris-HCl [pH 7.8], 150 mM NaCl, 1% NP-40, 0.1% SDS, and 0.5% Na-deoxycholate) supplemented with protease inhibitor cocktail, 100 mM NaF, and 2 mM PMSF. Cell lysates measuring equal counts per minute were immunoprecipitated with the E7 antibody. The E7 immunoprecipitates were separated by 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and developed by autoradiography. The level of 35S-E7 was quantified using a Molecular Dynamics PhosphorImager. The average decay rate of E7 from two independent experiments is presented.
E7 decay rate analysis. The Caski cells were grown as a monolayer or in methylcellulose-containing medium for 6 h, 12 h, or 18 h and were treated with 50 µg/ml of cycloheximide for different time periods (between 1 and 4 h). The cells were lysed in RIPA buffer containing protease inhibitors and phosphatase inhibitors; 200 µg of cell extracts was separated by 12% SDS-PAGE and blotted to a nitrocellulose membrane, which was probed with E7 antibody.
Western blot analysis. Western blot analysis was performed using a previously described procedure (3, 43). Cell lysates (50 to 300 µg) were resolved on SDS-PAGE, transferred to a nitrocellulose membrane, and probed with primary and horseradish peroxidase-conjugated secondary antibodies, and signals were detected by enhanced chemiluminescence (ECL; Amersham).
Flow cytometry. For analysis of distribution, 1 x 106 cells were fixed in 70% ethanol in phosphate-buffered saline, treated with 100 µg/ml RNase, and stained with 20 µg/ml propidium iodide. For each sample, 10,000 cells were analyzed for DNA content using a Coulter EPICS 753 flow cytometer. The percentages of cells in G1, S, and G2/M were determined using the EASY2 computer system (Coulter Electronics).
m7GTP affinity chromatography. eIF4E and 4E-BP1 were isolated by m7GTP-Sepharose chromatography as previously described (41). Briefly, cells were lysed in buffer containing 50 mM Tris-HCl (pH 7.5), 150 mM NaCl, 0.5% Triton X-100, 1.5 mm EDTA, 10% glycerol, 20 mM ß-glycerophosphate, 50 mM NaF, 200 µM NaVO4, 2 mM PMSF, 1.5 µg aprotinin/ml, and 5 µg leupeptin/ml. Cell lysates (500 µg) were incubated with 20 µl of m7GTP-Sepharose for 4 h at 4°C and washed extensively with lysis buffer followed by 1 mM GTP-containing buffer, and the beads were suspended in SDS sample buffer and boiled for 5 min. The bound proteins were separated by SDS-PAGE and analyzed by Western blot assay as described above.
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FIG. 1. Induction of the E7 protein during growth in methylcellulose-containing medium. (A) Caski cells were grown in methylcellulose-containing medium and were harvested at the indicated times. Cell lysates (200 µg) were separated by SDS-PAGE and analyzed by Western blot assay using E7 antibody and p27 antibody. Cell lysates (25 µg) were probed with pan-cytokeratin antibody and tubulin antibody. (B) Exponentially growing Caski cells as adherent culture and Caski cells growing in methylcellulose-containing medium for 14 h were analyzed by flow cytometry. HOK-16B cells (C) and BaP-T cells (D) grown in methylcellulose-containing medium were harvested at the indicated time. Cell lysates200 µg for E7, 100 µg for involucrin, and 25 µg for tubulinwere analyzed using an immunoblot assay. Caski cells (E) and BaP-T cells (F) cultured in medium containing 1.5 mM CaCl2 were harvested at the indicated times. Cell lysates (200 µg for E7, 50 µg for tubulin, and 250 µg for involucrin) were analyzed using an immunoblot assay.
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To further confirm that the induced expression of E7 during growth in methylcellulose is linked to differentiation, the Caski and BaP-T cells were allowed to differentiate in medium containing 1.5 mM CaCl2. Up to two- to fourfold induction of E7 protein was observed in both Caski and BaP-T cells after CaCl2 treatment (Fig. 1E and F). To determine the level of differentiation during CaCl2 treatment, the expression levels of the differentiation marker involucrin in BaP-T cells and cytokeratins in Caski cells were analyzed. A marginal increase in involucrin was observed in BaP-T cells after 36 h of CaCl2 treatment (Fig. 1F). Similarly, only a marginal increase in cytokeratins was observed in Caski cells (data not shown). These results suggest that in HPV-containing cells, CaCl2 induces only limited differentiation in comparison to growth in methylcellulose-containing medium. However, the level of E7 protein was induced during both methods of differentiation.
Half-life of the E7 protein did not change significantly during differentiation in methylcellulose-containing medium.
E7 protein has a short half-life (
1 to 2 h), and the steady-state level of E7 in tumor cells is maintained primarily through proteolysis by the 26S proteasome (16, 34, 43). To determine whether the increase in E7 in differentiating cells is due to increased stability, we analyzed the half-life of E7 using two different assays. First, we analyzed the half-life of E7 by a pulse-chase assay using [35S]methionine-cysteine. Caski cells grown in attached or methylcellulose cultures (14 h) were labeled with [35S]methionine-cysteine for 2 h and were chased for 1 to 6 h with unlabeled methionine. Interestingly, significantly more 35S-labeled E7 was obtained by pulse-labeling of differentiated Caski cells than by actively dividing cells. However, the half-life of E7 protein did not change during differentiation (Fig. 2A). The half-life of E7 was between 1 and 2 h both in actively dividing and in differentiating Caski cells (Fig. 2A). We also analyzed the half-life of E7 at various times during differentiation. For this analysis, Caski cells growing in methylcellulose for 6 h, 12 h, and 18 h were treated with cycloheximide (50 µg/ml) for 1 to 4 h, and the cell lysates were analyzed for E7 protein (Fig. 2B). The half-life of E7 protein did not change significantly during culturing in methylcellulose-containing medium.
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FIG. 2. The half-life of E7 did not change significantly during differentiation. (A) The Caski cells grown as a monolayer or in methylcellulose-containing medium (14 h) were labeled with [35S]methionine-cysteine for 2 h and chased with cold methionine for the indicated periods of time. The 35S-labeled E7 protein was immunoprecipitated and analyzed by SDS-PAGE. The level of 35S-E7 was quantified by a phosphorimager and plotted against the time of chase. The averages of two independent experiments are presented. (B) The Caski cells grown as a monolayer or in methylcellulose-containing medium for 6 h, 12 h, and 18 h were treated with cycloheximide (50 µg/ml) for 1 to 4 h. Cell lysates (200 µg) were separated by SDS-PAGE and analyzed by Western blot assay using E7 antibody.
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FIG. 3. The steady-state level of the E7 mRNA did not change significantly during growth in methylcellulose-containing medium. Total RNA was isolated from Caski cells or HOK-16B cells at the indicated times following growth in methylcellulose-containing medium. RNA (10 µg) was hybridized to 32P-labeled antisense-E7 and antisense-cyclophilin probes and processed by an RNase protection assay as described in Materials and Methods. The 32P-labeled E7 and cyclophilin probes are shown.
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FIG. 4. Increased polysome association of the E7 mRNA during differentiation. Caski cells (left) and BaP-T cells (right) were grown in a monolayer culture (A) or in methylcellulose-containing medium for 14 h (B). Cytosolic extracts were fractionated on a sucrose gradient (15 to 40%) as described in Materials and Methods. RNA isolated from each fraction (numbers indicated at the top) was analyzed for the presence of the E7 mRNA and Skp2 mRNA by an RNase protection assay. Staining for rRNA by ethidium bromide in gradient fractions is shown for each sample. Fractions 1 to 5 represent subpolysomal RNA, and fractions 6 to 9 represent polysome-associated RNA.
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FIG. 5. Induced and sustained phosphorylation of 4E-BP1 in differentiating HPV-containing Caski cells but not in normal human keratinocytes or non-HPV HaCaT cells. Cell lysates of normal human keratinocytes (150 µg), Caski cells (100 µg), and HaCaT cells (100 µg) grown in methylcellulose-containing medium for the indicated times were fractionated by SDS-PAGE and analyzed by Western blot assay using antibodies against phospho-4E-BP1 (Ser65), 4E-BP1, eIF4E, and phospho-eIF4E (Ser 209). Two hundred micrograms of Caski cell lysates was analyzed for E7 protein using a Western blot assay.
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FIG. 6. Changes in the levels of 4E-BP1 and eIF4E during growth in methylcellulose-containing medium. Lysates of primary oral keratinocytes (200 µg), HOK-16B cells (150 µg), BaP-T cells (100 µg), Caski cells (50 µg), SCC-25 cells (100 µg), and C33A cells (50 µg) grown in monolayer cultures or in methylcellulose-containing medium were analyzed by a Western blot assay using 4E-BP1 and eIF4E antibodies.
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FIG. 7. (A) Increased level of 4E-BP1 associates with the m7GTP resin in differentiating HaCaT cells but not in Caski cells. Lysates (500 µg) of Caski cells or HaCaT cells grown in methylcellulose-containing medium (for 14 h) were incubated with m7GTP-Sepharose beads as described in Materials and Methods. The proteins bound to the beads were analyzed for 4E-BP1 and eIF4E using a Western blot assay. (B) Rapamycin blocks expression of E7 protein in Caski cells. Caski cells grown as adherent culture or in methylcellulose-containing medium were treated with rapamycin (100 ng/ml) for 12 h. (Left) Lysates from attached (350 µg) or differentiated (200 µg) cells were analyzed for E7, tubulin (25 µg), and 4E-BP1 (100 µg) using a Western blot assay. (Right) Total RNA (10 µg) isolated from dimethyl sulfoxide (DMSO)- or rapamycin-treated cells was analyzed for E7 mRNA and cyclophilin mRNA using an RNase protection assay.
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Mobilization of the translation machinery, instead of the transcription machinery, to induce E7 during differentiation of HPV-containing tumor cells is intriguing. Multiple recent studies have shown that the deregulation of Cap-dependent translation by overexpression or induced phosphorylation of key translational regulators plays a major role in transformation and tumor formation (reviewed in references 4, 26, 28, and 36). The translation factor eIF4E promotes tumor formation and cooperates with c-Myc in lymphomagenesis (37). The activation of the translation complex has been shown to be essential for the genesis and maintenance of the malignant phenotype in human mammary epithelial cells (1). The oncogene Bcr-Abl kinase modulates the translation regulators ribosomal protein S6 and 4E-BP1 in chronic myelogenous leukemia cells to induce translation (25). Similarly, in this study we observed enhanced translation of the E7 mRNA in differentiated cells, which is linked to enhanced phosphorylation of 4E-BP1. Expression of high levels of E7 protein would support the ability of papillomaviruses to reinitiate the growth cycle in differentiated cells.
The translation of most eukaryotic mRNAs involves the Cap initiation complex eIF4F (15). The eIF4F complex involves three proteins: the Cap-binding protein eIF4E, the RNA helicase eIF4A, and the scaffold protein eIF4G (reviewed in references 14, 15, and 26). Among them, eIF4E is a limiting translation factor and a major target for translation regulation. 4E-BP1 regulates the initiation of Cap-dependent translation by association with the Cap complex through eIF4E. The binding of 4E-BP1 to the Cap complex depends on phosphorylation (2, 10, 15, 33). Hypophosphorylated 4E-BP1 competes with eIF4G to bind eIF4E to block formation of active translation complex. Hyperphosphorylation of 4E-BP1 inhibits association of eIF4E to 4E-BP1 and results in stimulation of translation (2). We observed both induced and sustained phosphorylation of 4E-BP1 in differentiating HPV-containing cells. The induction of 4E-BP1 phosphorylation coincided with the induction of E7 protein in Caski cells, suggesting that the translation inhibitor 4E-BP1 plays a major role in the accumulation of E7. Treatment of Caski cells with the TOR kinase inhibitor rapamycin blocked both the phosphorylation of 4E-BP1 and the expression of E7 in Caski cells. The phosphorylation of 4E-BP1 was sustained for up to 20 h without significant loss during differentiation of multiple HPV-containing cells, including Caski, HOK-16B, and BaP-T. In contrast, the phosphorylation of 4E-BP1 was reduced in primary keratinocytes and non-HPV cancer cells during differentiation in methylcellulose-containing medium. Consistent with this observation, significantly higher levels of 4E-BP1 were found to be associated with the 7-methyl GTP affinity resins in differentiating HaCaT cells, suggesting repression of Cap-dependent translation.
The molecular mechanism of sustained phosphorylation of 4E-BP1 during differentiation of HPV-containing cells is not elucidated in this study. However, these results support the notion that the formation of the functional translation initiation complex is induced and maintained during differentiation of HPV-containing cells. A recent study showed that eIF4E, but not 4E-BP1, is strongly phosphorylated during the onset of TPO-induced differentiation of UT7-mpl cells (7). Increased levels of eIF4E were also observed in differentiating lung tumor cell lines (42). The level of eIF4E or phospho-eIF4E did not change significantly during differentiation of HPV-containing cells. It is possible that the modifications of translation regulators during differentiation are cell type specific.
Viruses often use host DNA replication machinery to replicate viral DNAs, cellular transcription machinery to transcribe viral mRNAs, and cellular translation machinery to ensure translation of the viral mRNA. Different viruses utilize different strategies to use the host translation machinery for enhanced synthesis of viral polypeptides (38). However, little is known about how the human papillomaviruses interact with the cellular translation machinery. In high-risk oncogenic HPVs, E7 is expressed from a bicistronic E6/E7 pre-mRNA (44). The most abundant mRNAs transcribed from oncogenic HPVs are derived from the p97 promoter. The HPVs contain a differentiation-specific enhancer sequence that induces expression of late genes in differentiated cells. The differentiation-dependent promoter is not responsible for expression of E6/E7 mRNA (20). The E7 ORF is the second ORF after the E6 ORF in the E6/E7 mRNA. No mRNA that encodes E7 as the first open reading frame has been identified. In Caski cells, the most abundant in vivo mRNA is E6*IE7 in which part of the E6 ORF is spliced out, suggesting that E7 is formed from this mRNA. Thus, the 5' end of the E7 mRNA contains uAUGs and an sORF from E6 (29). It is possible that these uAUGs and the E6 ORF control translation of the E7 ORF.
The results described in this report show that Cap-dependent translation is enhanced in differentiating HPV-containing cells, in marked contrast to many viruses that impaired such translation. In herpes simplex virus type 1-infected cells, viral gene product ICP0 stimulates Cap-dependent translation to support viral DNA replication in quiescent differentiated cells (41). ICP0 stimulates phosphorylation of eIF4E and 4E-BP1 to enhance the assembly of active eIF4E complex, and this process is crucial for productive viral growth and efficient reactivation of latent infection (41). Since productive HPV infections in differentiated cells depend on the E7 function, the induction of E7 at the onset of differentiation might constitute a critical step in the HPV life cycle. The HPVs replicate exclusively in the differentiated epithelial cells, and the HPV late proteins are translated exclusively in the differentiated epithelial cells. Our studies show that Cap-dependent translation is enhanced in differentiating HPV-containing cells, in contrast to differentiating non-HPV cells. Parallel to the ICP0 protein of herpes simplex virus type 1, an HPV protein is likely involved in enhancing Cap-dependent translation in HPV-containing cells. A recent study showed that the HPV oncoprotein E6 associates with GADD34/PP1 to block PKR-initiated translation inhibition (23a). Future studies will be important in determining the identity of the HPV protein involved in enhancing Cap-dependent translation machinery in differentiating cells.
This work was supported by grants DE12506 and AG24138 from the National Institutes of Health.
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subunit of eukaryotic translation initiation factor 2 (eIF2
) phosphorylation by the human papillomavirus type 18 E6 oncoprotein: implications for eIF2
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