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Journal of Virology, November 2005, p. 14309-14317, Vol. 79, No. 22
0022-538X/05/$08.00+0 doi:10.1128/JVI.79.22.14309-14317.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Division of Hematology/Oncology, Children's Hospital Medical Center and The University of Cincinnati College of Medicine, Cincinnati, Ohio 45229,1 Department of Surgery, University of Cincinnati College of Medicine, Cincinnati, Ohio 45267,2 The Channing Laboratory, Brigham and Women's Hospital, and Department of Medicine, Harvard Medical School, Boston, Massachusetts3
Received 2 June 2005/ Accepted 19 August 2005
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HPV DNA is maintained episomally in benign, precancerous lesions but is generally found integrated into the cellular genome in malignant carcinomas and cell lines derived from them (12, 42). Sustained expression of the immortalizing viral oncogenes and oftentimes the loss of the viral E2 open reading frame are important attributes of such cell lines. The papillomavirus E2 protein is a regulatory factor with multiple roles in the transcription and replication of the viral DNA. Loss of E2 protein expression is likely important in the progression of HPV-associated carcinogenesis. E2 is known to directly bind and repress the viral E6/E7 promoter of integrated high-risk HPVs (6, 41, 46, 47). Reexpression of E2 in HPV-positive cancer lines results in cellular growth arrest and senescence, which requires E6/E7 promoter repression (14, 17, 18, 54). Under some circumstances, E2 expression can also cause apoptotic cell death in a manner that is independent of the HPV status of the affected cell (7, 8, 52).
The term cellular or replicative senescence defines the finite replicative capacity of most somatic cells in culture, which eventually results in the complete cessation of cellular division. Aside from replicative exhaustion, various forms of cellular stress, such as DNA damage or oncogene expression, can trigger a senescence program. Given that high-risk HPV E6/E7 expression induces cellular immortalization, the HPV oncogenes must therefore inactivate cellular senescence pathways to achieve immortality. Despite the potential biological significance of senescence in human cancer and aging (5, 36), relatively little is known about specific senescence regulators, mediators, or markers. In order to identify senescence-associated genes and gene groups in HeLa cells, we performed a genomic analysis of E2-mediated senescence in HeLa cells (53) and detected a marked downregulation of the human DEK proto-oncogene.
DEK is a 43-kDa nucleic acid-associated mammalian nuclear phosphoprotein that has been associated with a variety of human diseases (45, 51). DEK does not display any significant sequence homology to other known proteins, except for a conserved DNA binding motif, the SAP box domain (2). Although first identified as a fusion with the CAN nucleoporin gene in a subset of acute myeloid leukemia (AML) patients (48), transcriptional upregulation of the wild-type DEK gene was discovered in a number of tumors, including AML types which do not exhibit the DEK/CAN translocation (19, 30, 32, 33). In addition to its association with cancer, the DEK protein is often found as a major immunoreactive antigen in patients with autoimmune diseases, such as juvenile rheumatoid arthritis, systemic lupus erythematosus, and sarcoidosis (10, 11, 43, 55). Despite the significant association of the DEK proto-oncogene with human disease, details of its intracellular functions remain poorly understood and its pathophysiological relevance is thus not known.
Our results demonstrate that DEK message and protein levels are specifically repressed during cervical cancer cell senescence when induced either by E2 overexpression or by E6/E7 RNA interference (RNAi). Senescence was partially inhibited by the overexpression of DEK, implicating this molecule functionally as a senescence antagonist. Induction of replicative senescence of primary human keratinocytes and fibroblasts was also associated with DEK repression and, in support of a role for DEK in senescence inhibition, its overexpression was sufficient for extending the life span of primary human keratinocytes. Retroviral transduction of primary cells with the immortalizing HPV16 E6 and E7 oncogenes resulted in marked upregulation of DEK expression and defined high-risk HPV E7 as the relevant regulatory oncogene. Interestingly, DEK upregulation by the high-risk HPV16 E7 protein was not shared by the low-risk HPV6b E7 protein. Our study identifies the human DEK proto-oncogene as an upregulated target of high-risk HPV E7 with implications for HPV-associated carcinogenesis. Experiments using wild-type and retinoblastoma protein-deficient mouse embryo fibroblasts (MEFs) further demonstrate a critical role for the retinoblastoma protein family in the control of basal as well as E7-induced DEK expression. Based on the fact that retinoblastoma pathways are inactivated in the vast majority of human cancers, we propose that DEK may have wide clinical usefulness as a new diagnostic tool and potential drug target.
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Plasmid and viral constructs. Adenoviral AdE2-TR and AdE2-TA vectors were generated as previously described for AdE2ts virus (53) and using the BPV1 E2-TR and E2-TA open reading frames. The DEK open reading frame was PCR amplified using the following primers: 5'-ATG TCC GCC TCG GCC-3' and 5'-TCA AGA AAT TAG CTC TTT TAC AG-3', and a cDNA template provided by the Grosveld laboratory. The amplicon was then cloned into the pGEM-T Easy vector (Promega, Madison, WI), sequenced, excised using NotI, and cloned into the Adtrack cytomegalovirus vector cut with the same enzyme. Individual clones were screened for the correct orientation and were resequenced after recombination into AdEasy1 (22). Viral titers were determined by plaque assays on 293 cells. Producer cell lines for empty LXSN retrovirus as well as retroviruses expressing HPV16 E6, E7, and E6/E7, respectively, were a gift from Denise Galloway, University of Washington, Seattle. The HPV6b E7 producer cell line was purchased from the American Type Culture Collection.
Viral infections. Adenoviral infections were performed on two consecutive days at a multiplicity of infection (MOI) of 10 each unless otherwise indicated. For retroviral transductions, the cells were incubated for 4 hours with viral supernatant containing 2 µg/ml Polybrene and then with fresh medium overnight. The medium was replaced on the next day with medium containing 900 µg/ml of G418 for HeLa cells or 500 µg/ml for MEFs for the remainder of the experiment and 200 µg/ml for HFKs for 36 h.
Northern and Western blot analyses. Both Northern and Western blot analyses were performed as described previously (53). Antibodies used were the p53 monoclonal antibody (Calbiochem, San Diego, CA), polyclonal DEK antiserum (a gift from the Grosveld Laboratory, Memphis, TN) or monoclonal DEK antibody (BD Transduction Laboratories, San Jose, CA), and polyclonal survivin antiserum (Santa Cruz Biotechnology, Santa Cruz, CA). Signals were detected by secondary horseradish peroxidase-conjugated antibody (Amersham, Piscataway, NJ).
Cell cycle analysis. HeLa cells were detached from the plates using 0.1% EDTA in phosphate-buffered saline (PBS) at 37°C. The cells were washed with PBS and fixed in cold 80% ethanol at 4°C overnight. Cells were pelleted by centrifugation, washed twice with 1% bovine serum albumin in PBS, and 1 x 106 cells were resuspended in 800 µl of 1% bovine serum albumin in PBS, 100 µl of 500 µg/ml propidium iodide in 10 mM sodium citrate, pH 7.0, and 100 µl of boiled RNase A (10 mg/ml in 10 mM Tris-HCl, pH 7.5). Incubation was for 30 min at 37°C. Cell cycle profiles were obtained using a flow cytometer (BD Biosciences, San Jose, CA), and analysis was performed using Cell Quest software. For chemically induced cellular arrest in different phases of the cell cycle, HeLa cells were overlaid with medium containing either 400 µM mimosine (G0/G1), 2 mM thymidine (S), 400 µM mimosine and 2 mM thymidine (G1/S interphase), or 0.4 µg/ml nocodazole (G2/M) and harvested after 16 h.
Senescence assays. HeLa cells were preinfected with Ad versus AdDEK virus at an MOI of 100. Four days postinfection, the cells were split to 5 x 105 cells/ 10-cm dish and allowed to adhere. The cells were then infected twice with AdE2ts as performed for the microarray experiments previously (53) together with additional Ad or AdDEK virus (MOI = 50) for the respective Ad- or AdDEK-preinfected samples. On the next day, senescence samples were placed at 32°C, whereas control samples were incubated at 39.5°C. Control samples at 39.5°C became confluent rapidly and were split 1:10 prior to morphological examination at 2 weeks post-temperature shift. Staining for perinuclear Senescence-associated-ß-galactosidase (SA-ß-Gal) activity was performed as previously described (9).
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In order to examine DEK repression in response to expression of wild-type bovine papillomavirus (BPV) E2 proteins, we measured DEK mRNA and protein levels in HeLa cells after adenoviral expression of full-length BPV1 E2-TA compared to its truncated natural E2-TR variant. Whereas E2-TA efficiently represses the transcription of HPV18 E6/E7 in HeLa cells, E2-TR does not. The resulting ability of E2-TA, but not E2-TR, to cause senescence in HPV-positive cells has been well established (18, 25, 34, 53, 54). HeLa cells were infected with empty Ad, AdE2-TR, and AdE2-TA, and total RNA was subjected to DEK and glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-specific Northern blot analysis. DEK mRNA levels were reduced in the presence of E2-TA (Fig. 1A, lane 3) compared to E2-TR (lane 2) or empty Ad (lane 1). DEK protein levels were also reduced in response to E2-TA on day 3 (Fig. 1A, compare lane 6 with lanes 4 and 5). The observed repression of DEK was maintained for at least 7 days (lanes 7 to 15).
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FIG. 1. E2-TA-mediated DEK repression is specific to HPV-positive cells. (A) (Left panel) HPV18-positive HeLa cells were infected with empty adenovirus (Ad) or E2-TR-expressing (TR) or E2-TA-expressing (TA) adenovirus. RNA was harvested after 3 days and subjected to DEK- and GAPDH-specific Northern blot analysis. (Right panel) HeLa cells were infected with either empty Ad (lanes 4, 7, 10, and 13), AdE2-TR (lanes 5, 8, 11, and 14), or AdE2-TA (lanes 6, 9, 12, and 15) for the indicated number of days. Protein lysates were subjected to Western blot analysis using either DEK antiserum or actin antiserum as a loading control. (B) HPV16-positive Caski and SiHa cells, HPV-negative C33A cervical cancer cells, and primary HFKs were infected with empty Ad or E2-TR-expressing (TR) or E2-TA-expressing (TA) adenovirus. Protein lysates were harvested on day 3 postinfection and subjected to DEK- and actin-specific Western blot analysis (lower two panels). (C) HeLa cells were treated with mimosine (M) and/or thymidine (T) or nocodazole (N) as described in Materials and Methods to induce cellular growth arrest in different phases of the cell cycle. The cells were harvested either for cell cycle analysis (table on the left) or for DEK-specific Western blot analysis (right panels). Western blot analysis for a G2/M-phase-specific marker, survivin (35), was included as a control.
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DEK repression during E6/E7 RNA interference mediated senescence. The specific repression of DEK expression in HPV-positive cells (Fig. 1) suggested a possible involvement for the viral oncoproteins in the regulation of DEK, but it did not rule out more direct roles for E2 in this process. In order to determine whether DEK regulation was solely downstream from the viral oncoproteins and independent of other E2 functions, we used RNA interference for the targeted knock-down of HPV18 E6/E7 in the absence of E2 (Fig. 2). To inhibit E6/E7 oncogene expression in HPV-positive HeLa cells, we exploited the fact that transcription of both the HPV18 E6 and E7 oncogenes is directed from the common P105 promoter. This results in the synthesis of messages with E6 and E7 intact or with splices in the E6 gene. HeLa cells were either mock transfected or transfected with E6/E7-specific double-stranded small interfering RNA (siRNA) (E7 nucleotides 112 to 132) for repression of HPV E6/E7 mRNA levels.
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FIG. 2. DEK repression occurs during E6/E7 RNAi-mediated senescence. (A) Short-term growth arrest. HeLa (HPV18-positive; left) or 293 (HPV-negative; right) cells, respectively, were either mock transfected (shown in gray) or transfected with HPV18 E6/E7-specific siRNA (shown in black). Equal cell numbers were plated (day zero) and counted on the following five consecutive days. The results of a representative experiment are shown. The results of four independent experiments are quantitated on the right. (B) Colony assays. A total of 1 x 105 HeLa cells were either mock transfected or transfected with 200 ng HPV18 E6/E7-specific siRNA in the presence of 250 ng of neomycin resistance plasmid. The cells were split and selected for 2 weeks, and the number of colonies was determined after fixation and staining with methylene blue. Averages and standard deviations of three independent experiments are shown. (C) Senescence assays. HeLa cells were transfected and selected as for panel B. The cells were fixed and stained for SA-ß-Gal activity after 2 weeks. (D) HeLa cells were either mock transfected (lane 1), transfected with lamin A/C siRNA (lane 2), or transfected with HPV18 E6/E7 siRNA (lanes 3). RNA was harvested at 48 h posttransfection and subjected to HPV18 E6/E7-, DEK-, and GAPDH-specific Northern blot analysis.
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We next performed Northern blot analyses in order to determine whether DEK expression is affected by HPV18 E6/ E7-specific RNA interference (Fig. 2D). HeLa cells were either mock transfected (lane 1) or transfected with lamin A/C control siRNA (lane 2) or E6/E7-specific siRNA (lane 3). Total RNA was harvested at 48 h posttransfection. Equal amounts of RNA were subjected to Northern blot analysis using an HPV18 E6/E7-specific probe. Transfection with E6/E7 siRNA (lane 3) resulted in reduced levels of E6/E7 messages compared with lamin A/C (lane 2) or mock-transfected HeLa cells (lane 1). In order to ask whether direct interference with E6/E7 expression is sufficient for the observed E2-TA-mediated DEK repression, we next monitored DEK message levels following E6/E7 RNAi. DEK mRNA levels were suppressed by E6/E7 siRNA (lane 3), but not by lamin A/C siRNA (lane 2) or in the absence of siRNA (lane 1). E6/E7-specific RNA interference in HPV-negative 293 cells did not result in DEK repression (data not shown). We concluded that DEK expression in HPV-positive cells was dependent upon the functions of E6 and/or E7.
DEK is a cellular senescence inhibitor. In order to determine whether the observed DEK downregulation was important for cervical cancer cell senescence, we performed DEK overexpression experiments in a temperature-sensitive E2 senescence system. HeLa cells infected with the adenoviral AdE2ts virus undergo senescence at the permissive temperature of 32°C, whereas they remain nonsenescent at the restrictive temperature of 39.5°C or 37°C (53) (data not shown). We generated an AdDEK expression vector and observed that the timing of DEK protein expression following AdDEK HeLa cell infection was slow, albeit clearly detectable after 1 week (Fig. 3A, lanes 1 and 2). In order to ensure DEK expression prior to the point of senescence irreversibility (53), HeLa cells were preinfected with AdDEK virus or empty Ad as a control and reinfected with AdE2ts plus additional Ad and AdDEK virus 4 days after the initial infection as described in Materials and Methods. The cells were then subjected to senescence induction by temperature shift to 32°C. Western blot analysis revealed the expected downregulation of DEK expression upon E2 activation at the permissive temperature (Fig. 3A, compare lanes 3 and 4). AdDEK infection resulted in higher DEK protein levels at both temperatures (compare lanes 3 and 5 and lanes 4 and 6). Whereas all of the AdE2ts-infected control cells incubated at the permissive temperature exhibited the characteristically senescent morphology, DEK expression resulted in a mixture of cells with senescent as well as nonsenescent features, indicating partial repression of the E2 senescence phenotype (Fig. 3B, upper panels). No senescent cells were observed at the restrictive temperature due to the lack of E2 activity (Fig. 3B, lower panels). In agreement with these morphological findings, over 70% of the control cell population were positive for the senescence-specific SA-ß-Gal marker at 32°C, with a reduction to 15% upon DEK overexpression (Fig. 3C). These results were consistent with increased colony formation upon DEK expression in this experiment (Fig. 3D). Partial inhibition of E2-induced senescence via DEK overexpression supports our model that DEK is a senescence regulator and not simply a marker. We propose that increased DEK transcript levels in human tumors may reflect its senescence inhibitory function.
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FIG. 3. DEK is a senescence modulator. (A) HeLa cells were infected with empty Ad or AdDEK (lanes 1 and 2). HeLa cells were serially infected with either empty Ad or AdDEK and AdE2ts as described in Materials and Methods (lanes 3 to 6). Senescence was assessed after temperature shift to 32°C, which activates E2. P, permissive temperature; R, restrictive temperature. Protein samples were prepared at 7 days post-temperature shift and subjected to Western blot analysis. (B) Infected cells were photographed at 2 weeks post-temperature shift. (C) SA-ß-Gal-positive cells were counted within three independent fields and averaged. (D) Colony reduction assay. HeLa cells were infected with either empty Ad or AdDEK and AdE2ts as above, and the appearance of colonies was assessed by staining with methylene blue at 2 weeks after temperature shift.
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FIG. 4. DEK expression is decreased during replicative senescence of human cells, and ectopic DEK expression extends keratinocyte life span. (A) Keratinocyte (K) and fibroblast (F) cultures were prepared from human foreskin tissue. Protein lysates were prepared at the indicated passage numbers. Equal amounts of total protein were subjected to DEK-specific Western blot analysis. Keratinocytes at passage 5 and fibroblasts at passage 25, respectively, were stained for SA-ß-Gal activity and photographed. (B) Keratinocytes were infected with empty Ad or AdDEK at an MOI of 100 and were split when they reached approximately 60 to 80% confluence. For experiment 1, the cells were split 1:4 at every passage and infected twice at passages 3 and 4. For experiment 2, the cells were split to 5 x 105 cells per 10-cm plate at every passage and infected after each split, starting at passage 3. Passage numbers were recorded. Western blot analysis for experiment 2 is shown underneath. A portion of the cells was removed at every split and was subjected to DEK-specific Western blot analysis.
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FIG. 5. DEK is an induced target of HPV16 E7 in primary human keratinocytes and is regulated by members of the retinoblastoma protein family. (A) HFKs were transduced with either empty retrovirus (lane 1) or retroviral vectors expressing HPV16 E6 (lane 2), E7 (lane 3), or E6/E7 (lane 4). Cells were selected in G418, and total RNA was harvested after 6 days. Northern blot analysis was performed to analyze DEK mRNA expression. GAPDH expression was analyzed as a loading control. Protein lysates were harvested after 7 days. Western blot analysis was performed using DEK- and p53-specific antibodies, and actin expression is shown as a loading control. (B) HFKs were transduced with either empty retrovirus (lane 1) or HPV6b E7- (lane 2) or HPV16 E7- (lane 3) expressing retroviral vectors. Cells were selected in G418, and protein lysates were harvested after 7 days for DEK- and actin-specific Western blot analysis (top panels). HeLa cells were infected with the above retroviruses and selected in G418 for 10 days. Total RNA was harvested, and 10 µg of each RNA was subjected to either HPV16 E7-, HPV6b E7-, or GAPDH-specific Northern blot analysis (lower panels). (C) Wild-type MEFs were infected with either empty LXSN retroviral vector (lane 2) or HPV16 E6- (lane 3), E7- (lane 4), or E6/E7- (lane 5) expressing retroviruses. The cells were selected in 500 µg/ml G418 for 9 days prior to protein lysate preparation and Western blot analysis. Equal amounts of total protein were subjected to Western blot analysis using either DEK- or actin-specific antibodies. Lane 1 contains HeLa cell protein extract as a positive control. Triple pRB/p107/p130 knockout MEFs in comparison with controls were infected with empty versus oncogene-expressing retroviruses (lanes 6 to 12). The cells were selected, harvested, and subjected to Western blot analysis.
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Although first identified as a fusion protein in a subset of AML types, upregulated transcript levels of the human DEK oncogene have been reported for a variety of human tumors, including hepatocellular carcinoma, glioblastoma, and melanoma, tumors with a generally aggressive phenotype. Regarding the clinical significance of DEK induction in cervical cancer, it will be important to examine levels of DEK expression in human premalignant and malignant HPV-positive tissue samples. It is possible, considering DEK's responsiveness to high-risk HPV E7 expression in primary human keratinocytes, that upregulated levels of DEK may be useful in the diagnosis of high-risk HPV infection. Based on the observed pRB family-mediated repression of DEK expression and on the fact that retinoblastoma tumor suppressor pathways are disrupted in most human cancers, we speculate that upregulated DEK expression may turn out to be a frequent hallmark of human carcinogenesis. Whether DEK targeting strategies may apply to future therapeutic approaches will await studies of the role and requirement for the observed low DEK expression in primary cells.
Little is known regarding the mechanism of transcriptional DEK activation during carcinogenesis, although studies of the proximal 500-nucleotide promoter region have implicated YY1 and NF-Y binding sites in the high constitutive DEK expression in a T-cell lymphoma and glioblastoma cell line (44). Using the respective promoter construct in luciferase assays, we did not observe repression of the 500-bp DEK promoter in response to E2-TA in HeLa cells (data not shown). Distinct mechanisms may be involved in DEK induction in different malignancies or, alternatively, differences may exist in the regulation of the endogenous DEK promoter compared to heterologous promoter plasmids. What might be the molecular mechanism underlying the observed E7-mediated DEK induction? The observed lack of E7-mediated DEK induction in TKO cells strongly suggests that DEK transcription is modulated by at least one member of the retinoblastoma protein family. It is important to emphasize, however, that the lack of regulation of DEK protein expression during cell cycle progression appears to suggest additional levels of control. It will be important to follow DEK mRNA expression during cell cycle progression in a similar fashion in order to identify or exclude regulatory mechanisms that may apply in addition to pocket protein regulation. These studies will be complemented by the identification of the relevant trans-acting regulatory factors, which will involve detailed analyses of the respective cis-acting sequences within the DEK promoter.
This research was supported by an American Cancer Society Institutional grant to S.I.W. (92-026-09), by the American Cancer Society Ohio Division Supported Research grant for the year 2002 to S.I.W., by a Trustee grant from the Cincinnati Children's Hospital Research Foundation to S.I.W., and by a grant from the Ohio Cancer Research Associates to S.I.W.
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is modulated by the oncogene DEK. Nucleic Acids Res. 31:1571-1575.
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