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Journal of Virology, June 2005, p. 7380-7388, Vol. 79, No. 12
0022-538X/05/$08.00+0 doi:10.1128/JVI.79.12.7380-7388.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Riccardo Cortese,1
Gennaro Ciliberto,1
John W. Shiver,2 and
Antonello Pessi1*
IRBM P. Angeletti, Via Pontina Km 30.600, 00040 Pomezia (Rome), Italy,1 Merck Research Laboratories, 770 Sumneytown Pike, P. O. Box 4, WP26-381, West Point, Pennsylvania 194862
Received 12 October 2004/ Accepted 19 February 2005
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The influenza B virus, which is found almost exclusively in humans, has only one recognized subtype (39). However, two genetically distinct lineages are cocirculating in humans, represented by the B/Yamagata/16/88 and B/Victoria/2/87 viruses (9, 19, 46, 48). The two lineages are antigenically distinct, such that little or no postinfection cross-neutralizing antibody response is observed (45). Although the spectrum of disease caused by influenza B virus is generally milder than that by influenza A virus (15, 39), severe illness requiring hospitalization is still frequently observed (34).
Influenza A and B viruses continuously fluctuate in prevalence, with type and subtype dominance being different each year (9). The influenza B virus in particular has been the dominant one for 6 years between 1976 and 2001, accounting for >70% of laboratory-confirmed infections during those influenza seasons, and contributed
40% of infections for 3 more years (4). Because of the unpredictable type/subtype prevalence, the inactivated influenza vaccines currently in use must contain an influenza A virus H1N1, an influenza A virus H3N2, and an influenza B virus strain (41). These conventional vaccines represent an effective measure to prevent infection (20), but their efficacy depends primarily on the degree of antigenic "match" between the strains used for vaccine preparation and those circulating in the population. Since HA and NA readily undergo point mutations to evade the immune system (antigenic drift) (39, 41), the vaccine formulations need to be evaluated on a yearly basis and accordingly, vaccination must be performed annually. For influenza B virus, the emergence of new variants (36), coupled with the cocirculation of the different viral lineages (30, 46), makes the annual World Health Organization designation of the type B vaccine strain particularly problematic (48).
Against this background, the development of a universal influenza vaccine, effective against all circulating strains of both influenza A and B viruses and not requiring continuous manufacturing update, would meet a major medical need (59). Several laboratories have described important progress toward this goal for influenza A, but comparatively little attention has been dedicated to a universal influenza B vaccine. One reason is that the leading approach for the influenza A virus vaccine is based on the highly conserved, 24-amino-acid extracellular domain of the M2 protein (8, 10, 18, 33, 38), which has no equivalent in influenza B virus (20). Of the two influenza B virus candidate M2-like proteins, NB has been shown to be dispensable for viral replication in vitro (13), while BM2 has a very short extracellular ectodomain, with only five to six amino acids external to the membrane (32, 42). In addition, the antiviral drug amantadine, which blocks the acidification function of M2, is active against influenza A virus but not influenza B virus (40).
We describe here the design and validation in a preclinical animal model of a universal subunit vaccine for influenza B virus, based on the highly conserved maturational cleavage site of the precursor of the viral hemagglutinin HA0.
In addition, we present preliminary evidence that the same approach can be extended to influenza A virus, although the equivalent HA0 conjugate is less efficacious.
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Viruses, cells, and other reagents. Mouse-adapted A/Puerto Rico/8/34 (PR8; H1N1), A/Hong Kong/68 x PR8 reassortant (HKxPR8; H3N1), B/Ann Arbor/4/55, B/Hong Kong/330/2001, and B/Yamanashi/166/1998 viruses were produced as previously described (8) (unpublished data). The adjuvant QS21 was from Antigenics (Framingham, MA).
Animal studies and experimental protocols.
BALB/c mice (Charles River Laboratories, Wilmington, MA) and BALB/c mice lacking the
subunit of the Fc receptor (Taconic, Germantown, NY) were maintained in accordance with institutional guidelines. Vaccination and challenge protocols and nasal and lung wash collection were all as previously described (8). Briefly, animals (10 per group) were vaccinated intramuscularly with a given vaccine on alum adjuvant, with or without addition of the adjuvant QS21, and boosted twice at 2-week intervals. Mice were challenged intranasally with 20 µl of virus, corresponding to the 90% lethal dose (LD90) (10.24 hemagglutinin units), and body weight and the survival rate were recorded daily. For passive protection studies, serum (200 µl) from mice vaccinated with B/HA0-OMPC or with unconjugated OMPC, or monoclonal antibody (MAb) ascites (2 ml, diluted 1:5) of the three protective MAbs was transferred to naïve BALB/c or FcR() mice via intraperitoneal injection. Mice were challenged 4 h following serum transfer (unpublished data).
Fluorescence polarization competitive immunoassay. For the fluorescence polarization competitive immunoassay (FP-IA) assay, the B/HA0 peptide was covalently labeled with Alexa Fluor 488. A 25 µM solution in phosphate-buffered saline of the peptide, containing an extra cysteine at the N terminus, was reacted with Alexa Fluor 488 C5 maleimide (20:1 [wt/wt] fluorophore/peptide ratio), for 2 h at room temperature. The labeled peptide was purified by reversed-phase high-pressure liquid chromatography (HPLC). The concentration of the fluorescent-labeled peptide was determined using a BCA protein assay (Pierce, Rockford, IL) following the supplier's procedure.
When the labeled peptide, the MAb, and an unlabeled alanine mutant peptide were mixed in the assay, labeled and unlabeled peptide competed for antibody binding, and this competition was detected by changes in fluorescence polarization. Quantitation was made by running a dilution series for each peptide, using the same labeled control peptide for each. Each peptide generated its own binding isotherm and yielded a 50% inhibitory concentration (IC50) value. The IC50s of MAb D9E and O8F12 for the B/HA0 were 86.2 nM and 52.5 nM, respectively. The IC50 for the same MAbs of a set of alanine-substituted B/HA0 peptides was used as a measure of the relative contribution of each residue to binding.
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FIG. 1. (a) Alpha-carbon trace and (b) solvent-accessible surface of the cleavage site region (dark grey) of the HA0 precursor of the HA from the A/Hong Kong/68 influenza virus. Coordinates from reference 5.
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TABLE 1. Consensus sequence of the solvent-exposed region of the influenza A and B virus maturational cleavage sites
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Since it is well known that low-molecular-weight synthetic peptides are rarely immunogenic, even with an adjuvant (1), we conjugated the peptides to a carrier protein. We selected the outer membrane protein complex (OMPC) of Neisseria meningitidis, a carrier widely used in human vaccines (8, 23, 31, 58), which we have recently employed for a candidate influenza A virus M2 vaccine (8).
Immunogenicity and protection of the HA0-based influenza B vaccine. Mice were vaccinated with different doses of the B/HA0-OMPC conjugate, in the presence of the adjuvant QS21 (7, 26), which we had found particularly effective for the M2-conjugate vaccine (8). The vaccine was highly immunogenic, in a dose-dependent manner, with the highest dose producing a peptide-specific enzyme-linked immunosorbent assay (ELISA) geometric mean titer (GMT) of 1,080,941 (Fig. 2). We then tested the protection afforded by the conjugate by challenging vaccinated mice with LD90 of mouse-adapted influenza B/Ann Arbor/4/55 virus. As expected, only 10% of the animals in the control group survived, while 100% of the vaccinated mice were protected (Fig. 3a, top panel). In addition, significant protection from weight loss was also observed (Fig. 3a, bottom panel). Weight change is a sensitive parameter associated with the morbidity induced by the virus. Mice receiving the B/HA0 vaccine had only 10% maximum weight loss, compared to the 30% weight loss in control mice. Comparison with the results obtained in the same animal model with M2-based influenza A vaccines (8, 38) shows that the protection observed with B/HA0 is much more robust (see also below).
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FIG. 2. Induction of B/HA0 specific antibody responses in mice. Female BALB/c mice, 10 per group, were vaccinated intramuscularly with the indicated dose of B/HA0 conjugate formulated on alum and boosted once with the same antigen 4 weeks later. Blood samples were collected at 2 weeks after the second vaccination and tested for B/HA0 peptide-specific antibody titers by ELISA.
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FIG. 3. (a) B/HA0 vaccine protects against lethal viral challenge. BALB/c mice, 10 per group, were vaccinated with 1 µg of the B/HA0 conjugate formulated in alum and challenged with LD90 of B/Ann Arbor/4/55. After the challenge animals were monitored for survival (top) and weight change (bottom) for a total of 20 days. Solid circles, B/HA0 vaccinated, Solid triangles, control (OMPC vaccinated). The difference between the curves is statistically significant (P < 0.0001) (b) B/HA0 vaccine protects against respiratory viral replication in the lungs. BALB/c mice (32/group) were vaccinated with the B/HA0 conjugate (1 µg) formulated in alum plus 20 µg QS21 and challenged with 0.2 LD50 of B/Ann Arbor/4/55. The 50% tissue culture infectious dose (TCID50) of lung washes are represented as the mean of eight mice at each time point. Solid triangles, B/HA0 vaccinated; solid circles, OMPC vaccinated. The difference of overall lung viral shedding between the vaccine and control groups is statistically significant (P < 0.01), and the differences at day 3 and day 5 are also statistically significant (P < 0.05 and P < 0.01, respectively).
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HA0-based influenza B vaccine is broadly protective. As previously discussed, the commercially available vaccines are manufactured with only one influenza B virus strain, belonging to either one of the two antigenically distinct, cocirculating lineages B/Victoria/2/87 and B/Yamagata/16/88 (19, 41, 45, 46, 48), despite the fact that these lineages are not immunologically cross-reactive (45). We tested the B/HA0 vaccine against LD90 challenge by mouse-adapted viruses corresponding to the currently recommended strains for the two lineages, B/Hong Kong/330/2001 and B/Yamanashi/166/1998. As expected from sequence conservation of the cleavage site, complete protection was observed in both cases (Fig. 4).
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FIG. 4. B/HA0 vaccine protects against both lineages of influenza B. The percentage of mice (10 animals/group) surviving challenge is graphed versus days postchallenge. Solid circles, OMPC vaccinated, challenged with B/Hong Kong/330/2001. Solid triangles, B/HA0 vaccinated (1 µg, formulated on alum), challenged with B/Hong Kong/330/2001. Open circles, OMPC vaccinated, challenged with B/Yamanashi/166/1998. Open triangles, B/HA0 vaccinated (1 µg, formulated on Alum), challenged with B/Yamanashi/166/1998. The dagger indicates that no animal in the group was alive at this time point. All vaccines were given together with 20 µg of QS21.
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FIG. 5. Mechanism of protection. (a) Passive transfer of B/HA0 serum protects mice. The percentage of mice (10 animals/group) surviving challenge with LD90 of B/Ann Arbor/4/55 is graphed versus days postchallenge. Solid triangles, B/HA0 sera; solid circles, OMPC sera. (b) Protection by B/HA0 vaccine depends on the Fc R effector pathway. The effect of vaccination with B/HA0 against lethal challenge is compared in FcR() and normal FcR(+) BALB/c mice (10 animals/group). Solid triangles, BALB/c mice vaccinated with B/HA0. Open triangles, FcR() mice vaccinated with B/HA0. Solid circles, BALB/c mice vaccinated with OMPC; Open circles, FcR() mice vaccinated with OMPC. Vaccines (1 µg, formulated on Alum), were given together with 20 µg of QS21.
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Major part of the protective antibody response targets the fusion peptide. We then mapped the epitope of the three protective MAbs with a series of progressively N- and C-terminally truncated peptides. Remarkably, the same pattern was observed for all three MAbs: while truncation of several residues of the HA1 moiety was tolerated, truncation of even one C-terminal residue of the fusion peptide region completely ablated binding (unpublished data). To investigate the protective epitope in more detail, we prepared a panel of alanine-scanning mutants of the B/HA0 peptide and used a competitive fluorescence polarization immunoassay to establish the key binding determinants of the two most potent MAbs, O8F12 and D9E (Table 2). Both MAbs bind across the cleavage site, with only three critical residues: the arginine at the P1 position of the scissile bond (Arg8) and two phenylalanines in the fusion peptide moiety (Phe11 and Phe17). The two antibodies therefore bind the same residues, although differences in the binding affinities to each of the three critical amino acids were observed.
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TABLE 2. Relative binding affinity of MAbs D9E and O8F12 for single-point alanine mutants of the B/HA0 epitope
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Protection by HA0-based vaccine is Fc receptor mediated.
To further investigate the mechanism of protection by the B/HA0 vaccine, we immunized mice genetically deficient in the
subunit of Fc receptor (FcR). These mice completely lack expression of Fc
RI and Fc
RIII and display severely impaired antibody-mediated immune responses, including loss of natural killer (NK) cell-mediated antibody-dependent cellular cytotoxicity, macrophage phagocytosis, and mast cell degranulation in response to FcR cross-linking (56). When the FcR()-vaccinated mice were challenged with LD90 of B/Ann Arbor/4/55 virus, their survival rate was comparable to that of nonimmunized controls (10 to 30%), while, as expected, 90% of the normal FcR(+) mice receiving the vaccine were protected (Fig. 5b). It therefore appears that the Fc
R effector pathway is an important mechanism of protection of the humoral response against the HA0 vaccine.
Immunogenicity and protection of an HA0-based influenza A vaccine. Having established the efficacy of an HA0-based vaccine for influenza B, we examined if the same approach could be extended to influenza A. In the past, partial (20 to 40%) protection from lethal viral challenge had been reported with a peptide spanning the HA0 sequence of influenza A subtype H1 (16, 35). In these studies, animals vaccinated with the free peptide developed GMT of 1 x 104 to 3 x 104. We investigated if a more immunogenic HA0-OMPC conjugate could provide greater efficacy. In a first experiment, we tested the protection afforded by a subtype H3 HA0 vaccine in a mouse challenge model (Table 1). BALB/c mice vaccinated with the A/H3/HA0-OMPC conjugate in the presence of QS21 developed very high titers against the HA0 peptide, with a GMT of 4.5 x 106. The higher antipeptide titers translated into increased protection: when the mice were challenged with LD90 of influenza A/H3 virus, the majority (70%) of the vaccinated mice survived, compared to none in the control group (Fig. 6a, top). Unlike what was seen for influenza B, vaccinated animals still suffered significant weight loss, albeit less severe than that of the controls (Fig. 6a, bottom). This indicates that the HA0 vaccine, while effective in reducing mortality, is not as efficacious in preventing morbidity, in analogy to M2-based vaccines (8).
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FIG. 6. HA0-based vaccine against influenza A. (a) A/H3/HA0 vaccine protects against challenge with the homologous subtype of influenza A. Mice (10 animals/group) were vaccinated with the A/H3/HA0 conjugate (1 µg) formulated with 20 µg of QS21, and challenged with LD90 of influenza A/Hong Kong/68 x PR8 reassortant (H3N1). Animals were monitored for survival (top) and weight change (bottom). Solid triangles, A/H3/HA0 vaccinated, solid circles, OMPC vaccinated.The dagger indicates that no animal in the group was alive at this time point. (b) A/H3/HA0 vaccine protects against challenge with the heterologous subtype of influenza A. Mice (10 animals/group) were vaccinated with the A/H3/HA0 conjugate (3 µg), and challenged with LD90 of influenza A/Puerto Rico/8/34 (H1N1). Solid triangles, A/H3/HA0 vaccinated; solid circles, OMPC vaccinated. The difference between the curves is statistically significant (P < 0.001).
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Sequence conservation of the fusion peptide moiety of HA0 between influenza A and B (Table 1), coupled to the observation that the protective response against influenza B appears to target this region of the cleavage site (Table 2), suggested a further experiment, in which we challenged mice, vaccinated with either the B/HA0 or the A/H3/HA0 conjugate, with influenza B virus. Although to a lower degree than mice vaccinated with the homologous vaccine, mice vaccinated with the influenza A vaccine were partially protected from mortality (Fig. 7). The reverse, however, was not true, since mice vaccinated with the B/HA0 vaccine were not protected against influenza A virus challenge (data not shown).
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FIG. 7. A/H3/HA0 vaccine protects against challenge with influenza B. Mice (10 animals/group) were vaccinated with the A/H3/HA0 conjugate (1 µg), the B/HA0 conjugate (1 µg), or OMPC, all formulated with 20 µg of QS21, and challenged with LD90 of B/Ann Arbor/4/55. Solid triangles, B/HA0 vaccinated, open triangles, A/H3/HA0 vaccinated, solid circles, OMPC vaccinated.
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103), and yet only two subjects were later found positive for influenza B virus infection (their B/HA0 titers were 25,600 and 640, respectively) (data not shown).
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FIG. 8. Prevalence of anti-cleavage site antibodies in the human population. One hundred serum samples from adult humans, all positive for prior exposure to influenza A virus, were tested in ELISA against the A/H1/HA0 (open circle), A/H3/HA0 (solid triangle) peptides, and as a reference antigen to the influenza A nucleoprotein (NP) (open square). The geometric means (GM) with standard errors are shown for each antigen.
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The development of a "universal" vaccine is therefore a long-sought goal of influenza research. A universal vaccine should induce an immune response cross-protective against all circulating strains of both influenza A and B viruses. However, because of higher danger associated with influenza A virus infection (59), all the effort so far has been focused solely on the influenza A virus component, and no candidate universal influenza B vaccine is available today. Moreover, the most advanced candidates for influenza A all target the conserved M2 protein (8, 10, 18, 33, 38), a strategy which cannot be extended to influenza B (20).
In this manuscript we report the design and validation in a preclinical animal model of a universal influenza B vaccine. The epitope chosen for our vaccine is the intersubunit cleavage site of the HA0 precursor of the viral HA. Since HA0 cleavage occurs extracellularly in all human influenza viruses, it is an appropriate target for a humoral response. Because of its functional constraints, the epitope is extremely well conserved, providing the vaccine with broad specificity against all circulating influenza B viruses.
We have designed a subunit vaccine in which a peptide encompassing the consensus cleavage site sequence is conjugated to the carrier OMPC (8, 31, 58). Vaccines utilizing this carrier have been used extensively and are well tolerated in humans for carbohydrate epitopes (23).
We show that the proposed HA0 vaccine (i) is highly immunogenic, (ii) completely protects from mortality upon lethal viral challenge with viruses belonging to either one of the currently circulating influenza B lineages, (iii) provides protection from morbidity, as assessed from weight change in infected animals, and (iv) reduces viral replication in the lower respiratory tract of vaccinated animals.
We then show by passive transfer experiments that protection is mediated by antibodies. In addition, we have derived three anti B/HA0 MAbs, which are also able to protect by passive vaccination. These three MAbs all recognize a common epitope, which includes the P1 residue of the scissile bond, and two key amino acids in the fusion peptide moiety, indicating that in our vaccine this epitope is both immunodominant and protective. This finding is encouraging, since it is well established that even very conservative point mutations in the influenza virus fusion peptide dramatically alter the fusion phenotype (12, 43, 54) and detracts from the risk of inducing the formation of escape mutants by vaccination with HA0 conjugates.
Experiments with FcR() mice suggest that the B/HA0 antibodies elicited by the vaccine protect through indirect mechanisms, most likely by antibody-dependent cellular cytotoxicity (ADCC) rather than by direct blockage of the HA0 cleavage. NK-dependent ADCC has been reported as the mechanism of protection of the M2-based vaccine (17). Both antigens are abundantly expressed on the membrane of infected cells, with HA about fourfold higher than M2 (24). For the M2 vaccine, it has been argued that ADCC-dependent protection might be less efficacious than blockage of viral entry, which is exploited by the inactivated vaccines (17). In the mouse model, this difference translates into a different ability to prevent morbidity, as measured by the degree of weight loss following viral challenge. The B/HA0 vaccine effectively prevents weight loss, a feature more similar to the inactivated vaccines.
In conclusion, the B/HA0-OMPC conjugate can be proposed for clinical evaluation as a universal influenza B vaccine, with the most immediate use as a substitute for the influenza B virus component of the currently manufactured vaccines: it would provide the distinct advantages of eliciting protection against both circulating lineages of the virus while not requiring annual manufacturing updates.
Can the HA0 approach be extended to influenza A? Our preliminary experiments suggest a positive answer. By using an HA0 peptide from the consensus subtype H3 sequence in the form of an OMPC conjugate, we could induce a protective response against challenge with a homologous as well heterologous subtype virus, although protection against both mortality and morbidity appears considerably less robust than that obtained for influenza B. Our result nevertheless represent an improvement over the original observations with unconjugated HA0 peptide (16, 35), and careful optimization of peptide/carrier/adjuvant combinations might further improve the vaccine.
Although the reasons why the same approach gives better results for influenza B than for influenza A are presently unclear, we speculate that this may depend on the different structure and/or degree of exposure of the fusion peptide region of HA0 in the two viruses. If we map the key residues recognized by all three influenza B-protective MAbs (Table 2) onto the X-ray structure of influenza virus A/HA0 (5), we find that Arg8, Phe11, and Phe17 cannot form a common surface exposed to an antibody. On the other side, this epitope must be accessible in the intact influenza virus B/HA0 protein, since the MAbs are protective in vivo (unpublished data). Vaccination, as we do, with a linear form of HA0 might bias the immune response towards antibodies directed to this particular structure, which would be effective for influenza B but not for influenza A. The intriguing result that vaccination with the A/H3/HA0 conjugate provides some protection against challenge with influenza B virus (Fig. 7) is compatible with this hypothesis, since protection might be mediated by the antibody population directed to the epitope common to influenza A and B viruses. Moreover, the opposite should not occur, and indeed protection against influenza A virus challenge by vaccination with B/HA0 is not observed. Should this hypothesis be true, an A/HA0 vaccine based on a cyclic form of the peptide might be more efficacious.
At this stage, however, our A/HA0 vaccine could be proposed in combination with an M2-based vaccine, such as the M2-OMPC conjugate recently described by our laboratories (8). The presence of two different components against the influenza A virus would provide the potential for synergy and diminish the likelihood of simultaneous antigenic drift of both epitopes driven by an immune pressure apparently new to the human population (Fig. 8).
Further along this line, a triple-component conjugate vaccine (A/HA0, A/M2, and B/HA0) could potentially satisfy all the criteria for a truly universal influenza vaccine.
Finally, given the generality of the fusion mechanism mediated by class I fusion proteins such as HA (6, 52), the maturational cleavage site might be targeted for other viral vaccines.
Present address: International AIDS Vaccine Initiative, 110 William Street, 27th Floor, New York, NY 10038. ![]()
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