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Journal of Virology, January 2005, p. 193-201, Vol. 79, No. 1
0022-538X/05/$08.00+0 doi:10.1128/JVI.79.1.193-201.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Department of Microbiology and Immunology,1 Department of Biochemistry, National Cheng Kung University Medical College, Tainan, Taiwan2
Received 1 June 2004/ Accepted 10 August 2004
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(ProT). Expression of the ProT protein in vitro and in vivo mediated by rAAV/ProT gene transfer was detected by immunohistochemistry and a bioassay. Taken together, our results demonstrate that the PrV vector-based system is useful for generating rAAV vectors carrying various transgenes. |
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The efficient growth of AAV requires helper functions that are provided by a coinfecting adenovirus or herpesvirus. While adenovirus is an efficient helper virus for rAAV production, little consideration has been given to other helper viruses for AAV replication and packaging. Pseudorabies virus (PrV), a herpesvirus of swine, is also a fully competent helper virus for AAV replication (2). PrV contains several envelope glycoproteins that are important for interactions between virions and host cells. Glycoprotein D (gD) is essential for PrV entry into cells but is not required for the subsequent steps in virus replication (27), whereas glycoprotein E (gE) is dispensable for viral replication but is an essential protein for the transneuronal spread of PrV (26). Deletion of either the gD or gE gene reduces the virulence of PrV (25). Moreover, PrV-encoded thymidine kinase (TK) serves as another virulence factor to support viral DNA replication. PrV mutants that are defective in TK function reduce virulence, replication in peripheral target tissues, and migration to the central nervous system (14). For this study, we constructed a gD/gE/TK triply defective recombinant PrV, designated PS virus, to express the AAV Rep and Cap proteins and then employed it as a helper virus accompanied with packaging machinery for the production of rAAV vectors. With this system, rAAV vectors obtained from AAV plasmid vector transfection combined with PS virus infection to provide packaging and helper functions could be propagated to high titers in 293 cells that were coinfected with PS virus. Furthermore, rAAV vectors could be biologically titrated in this system. Therefore, this system facilitates the generation, amplification, and titration of rAAV vectors for gene therapy applications.
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Generation of recombinant PrV. The plasmid pDgD/rep-cap was derived from pDelta-gD (33) by replacement of the HSV TK expression module with an AAV rep-cap module. The fragment containing the rep and cap genes along with their native p5, p19, and p40 promoters was excised from pXX2 (39) by XbaI digestion followed by a fill-in reaction with Klenow polymerase and was then ligated into pDelta-gD that had been digested with EcoRI and HindIII followed by a fill-in reaction with Klenow polymerase. The targeting deletion vector pDelta-gD harbored 5'- and 3'-flanking regions to provide homology for homologous recombination with the CW1 virus at its unique EcoRI and HindIII sites. Using a previously described strategy of homologous recombination (33), we transfected Vero-gD cells with the pDgD/rep-cap plasmid and infected them 24 h later with the CW1 virus at 1.75 x 107 50% tissue culture infective doses (TCID50). After an overnight incubation, the culture medium was supplemented with acyclovir (64 µM) to isolate TK-negative PrV. The resulting plaque-purified gD/gE/TK triply defective mutant carrying the AAV rep and cap genes, designated PS virus, was propagated for 10 passages in the presence of acyclovir.
Production of rAAV vectors.
pSub201 (31) is an AAV-based plasmid that contains 96% of the internal AAV-2 coding sequence located between the two ITRs to accommodate replacement with a promoter and a gene of interest to generate rAAV plasmids. The ß-actin promoter-driven AAV vector plasmid pSub201/ß was derived from pSub201 by replacement of the XbaI-restricted rep-cap region with the PvuII-to-HpaI fragment encompassing the rat ß-actin promoter sequence of pJ6
(38). The pSub201/ß vector plasmid can be used to insert a transgene flanked by the ITRs. The pSub201/EGFP plasmid was used to produce a trackable enhanced green fluorescent protein (EGFP)-rAAV to assess our AAV production system. It was constructed by subcloning an EGFP cDNA obtained from pRUFneo/EGFP restricted with BamHI and BglII into the BamHI and BglII sites of pSub201/ß. Similarly, a prothymosin
(ProT) cDNA was obtained from EcoRI- and NotI-restricted pRUF/ProT (32) and cloned into the EcoRI and NotI sites of pSub201/ß, resulting in pSub201/ProT. rAAV vectors were produced by use of either the PS virus packaging-helper system or an AAV helper-free system (Stratagene, La Jolla, Calif.) according to the manufacturer's instructions. 293 cells were transfected with pSub201/EGFP or pSub201/ProT by the calcium phosphate precipitation method and then plated in 35-mm-diameter culture dishes followed by infection with various doses of PS virus. rAAV vectors were harvested 72 h after infection, and their titers were determined.
Titration of rAAV/EGFP by a fluorescent cell assay and the TCID50 method. 293 cells were infected with rAAV/EGFP, the infected cells were trypsinized, and cells expressing EGFP were counted by use of a hemocytometer and fluorescence microscopy 48 h later. The titers of rAAV/EGFP are expressed as EGFP transduction units (TU) per well. Because a cytopathic effect (CPE) was observed only for cells that were coinfected with rAAV and PS virus, and not for those infected with either virus alone, we were able to determine rAAV titers by the TCID50 method. BHK cells (2 x 105/well) were cultured in 24-well plates for 24 h, infected with different doses of rAAV/EGFP for 24 h, and subsequently infected with 106 TCID50 of PS virus. The cells were observed daily for CPE and stained with a 10% formalin-0.05% crystal violet solution. According to the onset of CPE, the biological titers of rAAV vectors were determined by the TCID50 method.
Detection of replication-competent PrV by the CPE method. rAAV stocks were tested for contaminating replication-competent PrV on Vero cells by the CPE method. The virulent PrV strain TNL, which induces severe CPE in BHK cells, was used as a positive control for the assay (33).
In vitro transduction of rAAV vectors and characterization of transgene expression. Seventy-two hours after infection with rAAV/ProT, NIH 3T3 cells were fixed in 3.7% formaldehyde, treated with cold acetone, and quenched in 3.7% H2O2 for the detection of ProT expression by immunohistochemical staining with a mouse monoclonal antibody against human ProT (38). After sequential incubations with horseradish peroxidase-labeled rabbit anti-mouse immunoglobulin G and aminoethyl carbazole as a substrate chromogen, the slides were counterstained with hematoxylin. To assess cell proliferation induced by ProT, we infected NIH 3T3 cells cultured in 96-well plates with rAAV/ProT at different doses in quadruplicate and incubated them for 4 days. PP23, a ProT-overexpressing NIH 3T3 clone (38), served as a positive control. [3H]thymidine (0.5 µl/well) was added to each well 18 h before harvest. The cells were harvested, and the [3H]thymidine incorporated into the DNA was counted by use of a Matrix 9600 direct ß counter (Packard, Meriden, Conn.).
In vivo delivery of rAAV vectors to muscle tissues. To monitor transgene expression in skeletal muscle, we inoculated mice intramuscularly in the posterior thigh with rAAV/ProT (31.8 TCID50) suspended in 0.5 ml of phosphate-buffered saline (PBS) containing charcoal or with the vehicle. After 10 days, the mice were sacrificed and the muscle at the site of injection was examined for ProT expression by immunohistochemistry as previously described (33).
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FIG. 1. Schematic presentation of the strategy for generating PS virus, a gD/gE/TK-defective PrV carrying the AAV rep and cap genes, and an rAAV vector. (A) The AAV gene cassette containing the rep and cap genes as well as their native p5, p19, and p40 promoters was excised from the AAV packaging plasmid pXX2 and cloned into the targeting deletion vector pDelta-gD to generate pDgD/rep-cap. The CW1 virus is a gD/gE-negative and HSV TK-positive recombinant PrV strain, with the HSV TK gene replacing the gD gene in the PrV genome. Vero-gD cells were transfected with the pDgD/rep-cap plasmid followed by infection with the CW1 virus. The resulting PS virus was generated by homologous recombination in the presence of acyclovir selection. (B) Gene "X," a transgene of interest, was inserted into pSub201/ß, a ß-actin promoter-driven rAAV vector plasmid flanked by the ITRs of AAV. 293 cells were transfected with the rAAV vector plasmid followed by infection with PS virus, resulting in the generation of rAAV vectors. (C) rAAV vectors generated as shown in panel B were used to directly infect 293 cells concurrent with PS virus infection, resulting in the amplification of rAAV vectors.
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FIG. 2. Influences of transfection efficiency and helper virus titer on rAAV yields. (A) 293 cells that had been transfected with pSub201/EGFP at different transfection efficiencies were plated in 35-mm-diameter culture dishes and infected with PS virus (3.72 x 106 TCID50). (B) pSub201/EGFP-transfected cells with a 70% transfection efficiency were infected with different amounts of PS virus, ranging from 0.9 x 106 to 5.4 x 106 TCID50. After 72 h, the cells were harvested, and rAAV vectors were determined by a fluorescent cell assay and expressed in EGFP TU.
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FIG. 3. Determination of rAAV titers by the TCID50 method via coinfection with PS virus. BHK cells (2 x 105/well) were cultured in 24-well plates for 24 h, infected with serial twofold dilutions of rAAV/EGFP for 24 h, and subsequently infected with 106 TCID50 of PS virus. The cells were also infected with either PS virus or rAAV vector alone, which served as negative controls. The cells were observed daily for CPE and were stained with crystal violet 6 days later. Lane 1, PS virus only; lane 2, rAAV vector only; lanes 3 to 6, serial twofold dilutions of rAAV vectors, starting from lane 3, in the presence of PS virus.
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FIG. 4. Determination of the optimal amount of PS virus required for rAAV amplification. 293 cells were infected with rAAV/EGFP (103 TU) for 24 h, followed by infection with different amounts of PS virus, ranging from 0.9 x 106 to 5.4 x 106 TCID50. After 72 h, the cells were harvested, and rAAV titers were determined by a fluorescent cell assay and expressed in EGFP TU. The amount of amplification was calculated by dividing the titer of the output virus by that of the input virus.
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TABLE 1. Serial passages of rAAV/EGFP via coinfection with PS virus resulted in rAAV vector amplificationa
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FIG. 5. Analysis of presence of replication-competent PrV in rAAV stocks by the CPE method. (A) Confluent Vero cells cultured in 96-well plates were infected with serial 10-fold dilutions, ranging from 101 to 1011, of an rAAV stock generated by the PS packaging-helper system. Meanwhile, Vero cells were infected with PrV strain TNL or mock infected to serve as positive and negative controls, respectively, in the CPE assay. At 5 days postinfection, the cells were stained with crystal violet. Lanes 1 to 11, serial 10-fold dilutions (101 to 1011) of rAAV or PrV TNL stock, starting from lane 1; lane 12, mock infected. (B) CPE was detected in Vero cells infected with PrV strain TNL, but not in those infected with the rAAV vector, by photomicrographic examination at 5 days postinfection. Original magnification, x200.
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FIG. 6. ProT expression in cells infected with rAAV/ProT in vitro and in vivo, as determined by immunohistochemistry. The expression of ProT was observed in rAAV/ProT-infected (A) but not mock-infected (B) NIH 3T3 cells. Original magnification, x400. Expression of the ProT protein was detected in rAAV/ProT- and charcoal particle-injected skeletal muscles from C3H/HeN mice (C), but not in their vehicle-control counterparts (D). Original magnification, x200. Note that ProT stained red and that charcoal particles, which were coadministered to facilitate the location of the injection sites, were present as black spots in panels C and D.
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FIG. 7. Determination of the biological activity of ProT in cells infected with rAAV/ProT by a cell proliferation assay. NIH 3T3 cells were infected with different doses of rAAV/ProT for 4 days. The cells were pulsed with [3H]thymidine for 18 h before being harvested, and cell proliferation was determined by measuring [3H]thymidine incorporation. Data are presented as the means of six determinations ± standard errors. PP23, a ProT-overexpressing NIH 3T3 clone, served as a positive control.
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HSV is able to support the replication and packaging of AAV (5). HSV-1 amplicons expressing the AAV Rep and Cap proteins along with HSV-1 helper functions have been shown to support the replication and packaging of rAAV vectors (12). The titer of an rAAV vector produced with an HSV-1 amplicon made by using an HSV-1 strain lacking ICP27, a protein that is required for HSV-1 replication, as a helper virus is equal to that achieved by supplying rep and cap by transfection followed by adenovirus superinfection. In contrast to the case when adenovirus serves as a helper virus, the replication of these HSV-1 amplicon stocks is not markedly inhibited by the expression of the Rep protein. An HSV-1 strain lacking the gene for the essential glycoprotein H (gH) has also been used to support the replication of HSV amplicons containing both an rAAV vector genome and a helper genome encoding rep and cap (40). Furthermore, an ICP27-defective HSV-1 strain expressing the Rep and Cap proteins has been constructed to serve as a single infectious helper virus to support rAAV replication and packaging (11). This recombinant HSV-1 vector has been found to be 100 times more efficient at producing rAAV than the HSV-1 amplicon system (12). Recently, Booth et al. (3) constructed HSV/AAV hybrid vectors in which all of the components necessary for rAAV production are contained within the HSV helper genome rather than also requiring a stably transfected cell line or transient transfection, thus allowing rAAV vector production from a single infection step. They demonstrated that rAAV vectors can be produced from both nonreplicating (with ICP27 deleted) and replicating HSV/AAV hybrid vectors.
Other than adenovirus and HSV-1, few studies have explored the possibility of using other helper viruses for rAAV replication and packaging. PrV, which belongs to the same subfamily as HSV, is also a fully competent helper virus for AAV replication (2). PrV has a broad host range and productively infects birds and most mammals, except for horses and higher primates, including humans, who are resistant to infection. Although PrV does not infect humans naturally, there are still concerns about using an animal virus as a helper virus to produce rAAV vectors. We therefore sought to employ a replication-defective PrV strain to construct a single helper virus to provide replication and packaging functions for rAAV vector production. Since the TK activity of herpesviruses has been associated with virulence, inactivation of the TK gene in the PrV genome attenuates the virus (14). With regard to safety concerns for gene therapy, recombinant viral vectors should not spread out to be transmitted to other uninoculated individuals. For this study, we developed a novel system for the generation of rAAV vectors by using a recombinant PrV strain carrying the AAV rep and cap genes to provide helper and packaging functions. PS virus, a gD/gE/TK triply defective PrV encoding rep and cap, is able to supply all trans factors and helper functions that are required for rAAV packaging. Using PrV, which is nonpathogenic for primates, as a helper virus for rAAV production may be safer than using HSV, a human pathogen. Furthermore, the replication of PS virus is not required for efficient replication and packaging of the rAAV vector. The use of noncomplementing cells, such as 293 cells, permitted the production of the rAAV vector without generating additional infectious PS virus. The helper PS virus would therefore be effectively eliminated from the rAAV vectors produced. Our data demonstrate that no detectable replication-competent PrV was generated during the production of rAAV stocks.
The large-scale production of rAAV vectors is required for preclinical and clinical studies. The application of recombinant PrV to introduce rep and cap as well as helper virus functions into cells to produce rAAV vectors has many advantages. As shown in Table 1, the use of PS virus to provide packaging and helper functions led to a significantly higher efficiency of rAAV production than that seen with a commercially available plasmid-based system. PS virus is flexible and can be utilized to produce rAAV vectors from either rAAV vector plasmid-transfected or rAAV-infected cells. Although the transfection efficiency of the calcium phosphate precipitation method varies with cell types, it usually reaches 103 to 105 (10). If a three-plasmid system were used for rAAV generation, theoretically the transfection efficiency would be estimated to be 109 to 1015 for the successful transfection of three plasmids into the same cell. Since in our system only one plasmid is required for transfection into cells in conjunction with infection with the gD/gE/TK-defective PrV carrying the rep and cap genes, the transfection efficiency would be expected to be higher than that of a two- or three-plasmid system, thus resulting in a more efficient production of rAAV vectors. More importantly, rAAV vectors generated by transient transfection of an rAAV vector plasmid concurrent with PS virus infection can be further propagated in 293 cells that are coinfected with PS virus, which apparently eliminates the need for transient transfection every time when producing rAAV vectors. After three cycles of serial passages, the total amplification of rAAV vectors was >107-fold. Therefore, our PS packaging and helper system based on gD/gE/TK-defective recombinant PrV may be useful for high-titer rAAV vector production.
For large-scale use of a vector in clinical trials, the development and availability of high-throughput production, an efficient concentration, and purification of the vector as well as reliable titration methods for viral particles are essential prerequisites. The establishment of scalable systems for AAV vector production has been explored with various systems, including insect cells. Urabe et al. (36) demonstrated that an rAAV vector produced in insect cells was indistinguishable from one produced in mammalian cells in its physical and biological properties. This robust system provides a simple, cost-effective method for AAV vector production on a large scale. While progress has been achieved in the production and purification of rAAV particles, there is still room for improvement in quantitative procedures. So far, most assays are based on the capability of the virus to transduce cultured cells. After transduction, either the intracellular replication of the recombinant virus genomes or the expression of an easily detectable transgene is measured (1, 20, 29). Examples of these assays are fluorescence cell assays based on fluorescence-activated cell sorting analysis (24), fluorescence microscopy (37), and serial dilution replication assays (13, 29). Although all of these methods are of proven value for the quantitation of viral titers, they can be influenced by parameters such as the helper virus used (15), the choice of promoter and cell type used for infection (29), and the concentration of magnesium (21), leading to significant differences in the resulting rAAV titers. Other assays are independent of the infectivity of the virus. They depend on lysis of the core unit and release of the single-stranded DNA. Serial dilutions of the dot-blotted DNA can be compared to a plasmid probe, and the number of particles can then be calculated (16). More recently, a real-time PCR method that is independent of marker gene expression was presented for the quantitation of rAAV particles. The primers are targeted for the detection of marker genes, therapeutic genes, or the promoter driving the transgenes (13, 28). For clinical applications of rAAV, the reporter genes must be removed from the vector plasmid and can therefore not be used for titration. One of the possible reasons for more clinical trials using adenovirus than those using other viruses is the feasibility of performing biological titration with recombinant adenoviral vectors. Although virus titers determined by biological titration are lower than those obtained by chemical titration, biological titers should be more reliable for estimating the effects of viral vectors in vitro and in vivo. Using the PS helper virus reported here, we demonstrated the biological titration of rAAV vectors by the TCID50 method, which may benefit further applications of rAAV vectors in preclinical and clinical studies.
In conclusion, this is the first report to exploit a gD/gE/TK-defective PrV carrying the rep and cap genes as a single helper virus that is capable of supporting replication and packaging of an rAAV vector. The PS packaging and helper system for the production of rAAV vectors described in the present study may provide the following advantages. This system is much simpler than plasmid-based protocols because a high successful transfection rate is not required. Furthermore, rAAV vectors can be serially packaged and amplified in 293 cells after coinfection with PS virus. Notably, the biological titration of rAAV vectors is feasible with this system. Combined with recently developed purification procedures for AAV (7), PS virus is an ideal packaging and helper virus for the production of high-titer rAAV vectors, which should permit the widespread use of rAAV vectors for clinical applications.
This work was supported by grants from the National Science Council, Taiwan (NSC90-2318-B-006-003-M51 and NSC 91-2320-B-006-085).
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promotes cell proliferation in NIH3T3 cells. Life Sci. 61:2091-2101.[CrossRef][Medline]
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