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Journal of Virology, April 2004, p. 4176-4184, Vol. 78, No. 8
0022-538X/04/$08.00+0 DOI: 10.1128/JVI.78.8.4176-4184.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Aruna Panda,
Subbiah Elankumaran,
Dhanasekaran Govindarajan, Daniel D. Rockemann, and Siba K. Samal*
Virginia-Maryland Regional College of Veterinary Medicine, University of Maryland, College Park, Maryland 20742
Received 20 October 2003/ Accepted 11 December 2003
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The surfaces of NDV particles contain two important functional glycoproteins: the fusion (F) and hemagglutinin-neuraminidase (HN) proteins. In general, membrane glycoproteins drive the assembly and budding of enveloped RNA viruses (41) and are the key players in determining host range and tissue tropism. The F protein mediates both virus-cell and cell-cell fusion (14). The F protein is synthesized as a nonfusogenic precursor, F0, and becomes fusogenic only after cleavage by host cell proteases into disulfide-linked F1 and F2 polypeptides (36). The cleavability of F protein is directly related to the virulence of viruses in vivo. A high content of basic amino acid residues at the F0 cleavage site is correlated with virulence (3, 47). Recent studies with recombinant NDV generated by reverse-genetics techniques showed that modification of a lentogenic F cleavage site to a velogenic cleavage site increased the virulence of the strain (32, 33) but did not reach the virulence level of velogenic strains. This result indicated that the efficiency of cleavage of the F0 protein is not the sole determinant responsible for the virulence of NDV.
The HN protein of NDV is a multifunctional protein. It possesses both the receptor recognition and neuraminidase (NA) activities associated with the virus. It recognizes sialic acid-containing receptors on cell surfaces; it promotes the fusion activity of the F protein, thereby allowing the virus to penetrate the cell surface; and it acts as an NA by removing the sialic acid from progeny virus particles to prevent self-agglutination of progeny virus (22). Thus, the HN protein plays an important role in viral infection. Although the functions of the HN protein in NDV infection have been well studied, its role in NDV pathogenesis is not known at present. It has recently been shown that the cleavability of the F protein alone does not convert an otherwise nonpathogenic strain into a highly virulent pathotype (32).
In this study, we exchanged the HN genes of the virulent recombinant NDV strain rBeaudette C (rBC) and the avirulent recombinant NDV strain rLaSota (rLaSo), thus generating the chimeric recombinant NDV viruses rBC LaSoHN and rLaSo BCHN. Here, we show that the HN gene-swapped viruses were viable and that their tropism and virulence were altered depending on the nature of the HN gene sequence. The rBC LaSoHN virus showed reduced virulence, while the rLaSo BCHN virus showed an increase in virulence.
The rBC and rLaSo BCHN viruses were distributed systemically in chicken embryos, while the rLaSota and rBC LaSoHN viruses remained in the respiratory tract and never reached systemic sites. These altered pathogenic properties evidenced by the exchange of the HN gene indicate its essential role in the tropism and virulence of NDV.
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Construction of plasmids and recovery of chimeric viruses. Full-length antigenomic cDNAs of NDV strains BC and LaSota, designated pBC and pLaSota, respectively, were cloned into the low-copy-number plasmid vector pBR322. These cDNA clones were used to rescue the recombinant viruses rBC and rLaSota, respectively, as described elsewhere (16, 21). A chimeric rBC virus containing the LaSota HN gene in place of its own and the reciprocal recombinant rLaSota virus containing the BC HN gene were generated for this study (Fig. 1). The unique MluI and AgeI sites in pBC and the MluI and SnaBI sites in pLaSota at the F-HN and HN-L intergenic regions were used for exchanging the HN genes between the full-length plasmids. The LaSota HN gene was amplified by PCR using the MluI (+) primer 5' AACTACGCGTTGTAGATGACCAAAGGACGATATACGGGTAG 3' and the AgeI (-) primer 5' GATCACCGGTACGTATTTTGCCTTGTATCTCATTGCCACTTAC 3'. The BC HN gene was amplified by using the MluI (+) primer described above and the SnaBI (-) primer 5' GATCTACGTATTTTGCCTTGTATCTCATTGCCACTTAC 3'. Restriction sites in each primer are indicated by boldfaced letters. The resulting full-length clones were designated pBC LaSoHN and pLaSo BCHN, respectively. These plasmids were used to recover the recombinant chimeric viruses rBC LaSoHN and rLaSo BCHN by using reverse-genetics procedures (21).
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FIG. 1. Schematic representation (not drawn to scale) of the strategy for exchange of the HN gene between the rBC and rLaSota viruses. Two unique restriction sites (MluI and AgeI in the rBC virus and MluI and SnaBI in the rLaSota virus), introduced into the HN intergenic region during construction of the full-length genome of NDV (16, 21), were used for the HN gene swap. The HN gene was exchanged as a single restriction fragment between the rBC and rLaSota viruses, by using the MluI and AgeI and the MluI and SnaBI sites, respectively. The first and last nucleotides of the entire full-length genome of the parental rBC virus are indicated. The approximate locations of the restriction sites used are indicated (arrows). NP, nucleocapsid protein; P, phosphoprotein; M, matrix protein; L, large polymerase protein.
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Growth characteristics of viruses. The growth kinetics of rBC LaSoHN and rLaSo BCHN were determined under multiple-cycle growth conditions in DF1 cells. The virus was inoculated at a multiplicity of infection (MOI) of 0.01 into DF1 cells grown in DMEM with 5% FBS at 37°C. The medium of cells infected with rLaSo BCHN contained 1 µg of acetyl trypsin/ml. The supernatant was collected at 8-h intervals until 56 h postinfection (p.i.). The virus content in the samples was quantitated by plaque assays in DF 1 cells. Briefly, supernatants, collected from virus-inoculated samples earlier, were serially diluted, and 100 µl of each serial dilution was added per well of confluent DF1 cells. After 60 min of adsorption, cells were overlaid with DMEM (containing 2% FBS and 0.9% methylcellulose) and then incubated at 37°C for 3 to 4 days. The cells were then fixed with ethanol and stained with crystal violet for enumeration of plaques.
NA assay.
A fluorescence-based NA assay was carried out as described by Potier et al. (34). Briefly, serial twofold dilutions (undiluted to 1/1,024) of virus samples were prepared in 50-µl volumes of enzyme buffer (32.5 ml of 0.1 2-N-morpholinoethanesulfonic acid [MES; pH 6.5] and 4.0 ml of 0.1 M calcium chloride made up to a final volume of 100 ml with Milli-Q water) in a 96-well plate. Ten microliters of 12.5% (vol/vol) dimethyl sulfoxide was added to all wells of an assay plate (black 96-well plates; Microfluor, Franklin, Mass.). Ten microliters of each virus dilution was transferred in duplicate (two rows) to the assay plate, starting with the most dilute in column 11. Ten microliters of enzyme buffer alone was added to each well of column 12 (blank wells). The reaction was initiated by the addition of 30 µl of substrate mix [1 volume of 325 mM MES (pH 6.4), 3 volumes of 10 mM calcium chloride, and 2 volumes of 0.5 mM 2'-(4-methylumbelliferyl)-
-D-N-acetylneuraminic acid (MUN) (Sigma)] per well to give a final concentration of 100 µM MUN in the assay. The reaction mixture was incubated at 37°C for 15 min with shaking, and the reaction was terminated by the addition of 0.014 M sodium hydroxide in 83% (vol/vol) ethanol at 150 µl per well. The NA activities of the recovered viruses were measured as the amount of 4-methylumbelliferone released from the fluorogenic substrate, MUN. Released 4-methylumbelliferone was quantified by fluorometric determination with an excitation wavelength of 360 nm and an emission wavelength of 450 nm. Readings from the substrate blanks were subtracted from the virus sample readings, and the means of duplicate readings were calculated.
Hemadsorption (HAd) assay. Virus was inoculated into confluent monolayers of Vero cells in 6-well plates at an MOI of 10. After 18 to 24 h, the medium was decanted and the cells were overlaid with guinea pig erythrocytes (RBCs) in PBS at a concentration of 108 cells/ml. The plates were kept at 4°C for 15 min. Unbound RBCs were removed by two washes with PBS. The RBCs bound to the virus-infected cells were lysed with 0.05 M ammonium chloride, and the released hemoglobin was measured at 549 nm in a spectrophotometer.
Fusion index assay. The fusogenic abilities of the recombinant viruses were examined as described by Kohn (20). Virus was inoculated into confluent (106cells/ml) Vero cells in 6-well plates at an MOI of 0.1. Cells were maintained in 5% DMEM at 37°C under 5% CO2. After observation of cytopathic effects (CPE) within 48 to 72 h, the medium was removed, and cells were washed once with 0.02% EDTA and then incubated with 1 ml of EDTA for 2 min at room temperature. The cells were then washed with PBS and fixed with methanol for 20 min at room temperature. Cells were stained with hematoxylin-eosin (Hema 3). Fusion was quantitated by expressing the fusion index as the ratio of the total number of nuclei to the number of cells in which these nuclei were observed (i.e., the mean number of nuclei per cell). The NA, HAd, and fusion index values of all viruses were expressed as percentages of these values for the wild-type virus, rBC, which were considered to be 100%.
Immunohistochemistry. The tissue tropism of recombinant NDV was examined in 9- to 11-day-old embryonated chicken eggs. Briefly, 103 PFU of each of the recombinant NDV strains was inoculated into developing chicken embryos by the chorioallantoic route. The infected embryos were chilled at 48 h p.i., and tissues such as the spleen, kidney, small intestine, large intestine, lung, heart, and brain were collected and fixed for cryosectioning and processing as described by Sheela et al. (40). The tissues were cryosectioned, and sections of 3- to 5-µm thickness were cut for immunohistochemistry. All tissues sampled were examined by immunohistochemistry using the following protocol to detect the viral HN protein. The sections were rehydrated in three changes of PBS (10 min each), followed by treatment with proteinase K (10 µg/ml) for 30 min at 37°C. The sections were then washed three times with PBS, fixed with ice-cold acetone, and washed again in PBS. To quench endogenous peroxides, the sections were flooded with 0.3% hydrogen peroxide in methanol for 30 min at room temperature. After being washed with three changes of PBS at 10-min intervals, the tissues were blocked with normal horse serum (VectaStain kit; Vector Laboratories, Burlingame, Calif.) for 30 min. The sections were then incubated with a 1:500 dilution of the primary NDV monoclonal antibody (23) cocktail against HN (10D11, AVS, 15C4, and B79) for 1 h at room temperature. After a wash, sections were incubated with the VectaStain secondary antibody (Vector Laboratories) for 30 min, as recommended by the manufacturer. After a further wash cycle, the sections were incubated with the VectaStain ABC reagent for 30 min. The substrate was NovaRed (Vector Laboratories). Sections were counterstained lightly with hematoxylin and were mounted with Vectamount (Vector Laboratories) for a permanent record.
MDT in chicken embryos. The virulence of the recovered viruses was determined by the mean death time (MDT) in embryonated specific-pathogen-free (SPF) chicken eggs (1). A series of 10-fold dilutions of infected allantoic fluid was made in sterile PBS, and each dilution (0.1 ml) was inoculated into the allantoic cavity of five 9-day-old embryonated eggs. The eggs were incubated at 37°C and examined four times daily for 7 days. The time at which each embryo was first observed dead was recorded. The highest dilution at which all embryos died was considered the minimum lethal dose. The MDT recorded was the mean time (in hours) required for the minimum lethal dose to kill the embryos. The MDT has been used to classify NDV strains as velogenic (taking less than 60 h to kill), mesogenic (taking 60 to 90 h to kill), or lentogenic (taking more than 90 h to kill).
Pathogenicity studies in chickens. To test the pathogenicities of the recovered viruses in vivo, an intracerebral pathogenicity index (ICPI) test was performed according to standard procedures (1). For ICPI, 103 PFU of each virus/chicken was inoculated intracerebrally into groups of 10 1-day-old SPF chicks. Inoculation was performed with a 27-gauge needle attached to a 1-ml stepper syringe dispenser that was set to dispense 0.05 ml of inoculum per inoculation. The birds were inoculated by inserting the needle up to the hub into the right or left rear quadrant of the cranium. The birds were observed for clinical symptoms and mortality once every 12 h for 8 days. Equal numbers of chickens were used in each experiment. Each experiment included mock-inoculated controls that received a similar volume of sterile PBS by the respective routes. ICPI values were calculated as described by Alexander (1). Briefly, the birds were scored daily: 0 if normal, 1 if sick, and 2 if dead. The ICPI value was the mean score per bird per observation. Highly virulent (velogenic) viruses give values approaching 2; avirulent (lentogenic) viruses give values close to 0. To assess the survival rates of birds inoculated with the recombinant viruses, 1-day-old chicks were inoculated intracerebrally with 103 PFU/chick. Infected chicks were observed daily for 8 days for signs of paralysis and death. The percent survivability of inoculated chicks was plotted over time.
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Growth of recombinant viruses in vitro. The growth characteristics of the parental and chimeric viruses were assessed by multistep growth curves (Fig. 2). The differences in the growth kinetics of HN gene swap viruses were observed until 16 h p.i. Compared to that of its parental rLaSota virus, the growth rate of the rLaSo BCHN virus was more than twofold higher at 16 h p.i., while the growth rate of the rBC LaSoHN virus was 1.4-fold lower than that of its parental rBC virus. The parental and gene swap viruses grew to similar titers after 32 h p.i. These studies showed the relevance of HN to virus growth in vitro. No differences were observed between the plaque sizes of recombinant HN gene swap viruses and their parental viruses. These results indicated that heterotypic F and HN proteins were compatible in the chimeric viruses.
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FIG. 2. Growth kinetics of parental and chimeric viruses in chicken embryo fibroblast (DF1) cells. Multiple-cycle growth conditions were used to assess the differences in the growth of these viruses. DF1 cells were infected with virus at an MOI of 0.01. Supernatants collected at 8-h intervals were used for determining virus titers by a plaque assay. Data are means from three independent experiments.
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FIG. 3. In vitro biological activities of parental and HN chimeric viruses. The HAd activities, NA activities, and fusogenicities of the parental and HN chimeric viruses were examined. The biological activities of these viruses are expressed as percentages of those of the rBC virus, whose activities were considered to be 100%. HAd was measured as the percentage of the hemoglobin released from guinea pig RBCs attached to infected cells. The NA activities of purified parental and chimeric viruses were measured by a fluorometric assay. The fusion index was estimated in Vero cells infected at an MOI of 0.1. Cells were stained with hematoxylin-eosin, and the fusion index was calculated. The fusion index is the ratio of the total number of nuclei to the number of cells in which the nuclei were observed, i.e., the mean number of nuclei per cell. Data are means from three independent experiments.
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FIG. 4. Cytopathogenicities of parental and chimeric viruses in DF1 cells. Cells were infected with virus at an MOI of 0.1. After 24 and 48 h, the CPE of each virus-infected monolayer were examined under an inverted microscope. The differences in the CPE of each virus-infected monolayer at 24 and 48 h p.i. are shown. (Top) CPE observed at 24 h p.i. for the indicated viruses. (Bottom) CPE at 48 h p.i.
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FIG. 5. Tissue tropism of recombinant NDVs in developing chicken embryos. Groups of 9- to 11-day-old chicken embryos were inoculated with 103 PFU of each of the parental and HN chimeric NDVs by the chorioallantoic route. Frozen sections from infected embryos were processed for immunohistochemistry after 48 h. Tissue sections were stained with the primary NDV monoclonal antibody cocktail followed by VectaStain (Vector Laboratories) and the VectaStain ABC reagent. The substrate was NovaRed (Vector Laboratories). Representative sections from each virus-infected embryo are shown. While the rLaSota and rBC LaSoHN viruses showed no staining in the cerebellum (A and B), the cerebellum showed extensive antigen-specific red staining (arrows) in the molecular layer with the rBC or rLaSo BCHN virus (C and D). Viral antigens were localized in the bronchial and bronchiolar epithelium with the rLaSota (E) or rBC LaSoHN (F) virus, but diffuse interstitial staining was noticed with the rBC (G) or rLaSo BCHN (H) virus. Magnification, x14.
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TABLE 1. HN chimeras of NDV and virus pathogenicity in vivoa
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FIG. 6. Survivability of 1-day-old chicks inoculated with parental or HN chimeric viruses. SPF 1-day-old chicks were inoculated intracerebrally with 103 PFU/chick. Infected chicks were observed daily for 8 days for signs of paralysis and death. Percent survivors for each virus is plotted over time.
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Sequence analysis of the chimeric viruses confirmed the presence of the substituted HN gene. These chimeric viruses reached similar titers, with similar kinetics, compared to those viruses with homologous proteins. This finding suggested that heterologous pairs of HN and F proteins were fully functional despite being derived from different viruses. This functionality probably reflects the high level of amino acid sequence identity between these two different NDV strains (98.4% in F and 97.1% in HN). The BC and LaSota strains used in this study are phylogenetically closely related (2). Therefore, it would be interesting to examine whether the HN and F protein pairs derived from distantly related NDV strains are also functional in vitro and in vivo.
In vitro studies with these viruses yielded results that supported the hypothesis of the importance of the HN gene in NDV virulence. The parental rBC virus showed higher HAd and NA activities than the parental rLaSota virus. Interestingly, the rLaSo BCHN virus also showed higher HAd and NA activities than its parent, rLaSota. These activities were lower in the rBC LaSoHN virus than in the parental rBC virus. These results indicated that the magnitude of the HAd and NA activities of NDV are determined solely by the amino acid differences in the HN protein. The fusion promotion activity of HN appeared to be independent of the HAd and NA activities. Despite the fact that the HAd and NA activities of the BC and LaSota viruses were at different levels, the heterotypic HN proteins in the chimeric viruses were fully functional in fusion promotion. Our results are in agreement with those of Sergel et al. (38), who have shown that the fusion promotion activity of HN did not correlate with the level of NA activity.
Several reports have suggested that a type-specific functional interaction between the F and HN proteins of paramyxoviruses is required for cell fusion (10, 15, 43). Studies of hybrid HN proteins by three different laboratories have all implicated the membrane-proximal ectodomain in virus-specific fusion promotion activity (9, 44, 45). With this approach, the specificity of the NDV F protein has been mapped to amino acids 55 to 141 of the NDV HN protein, a sequence adjacent to the HN protein transmembrane domain (9). However, we have demonstrated in this study that chimeric NDVs containing heterotypic F and HN proteins were compatible, since they were derived from phylogenetically closely related virus strains (2). It has been suggested that a specific interaction occurs between the F protein HR2 domain and the HN protein domain from amino acids 124 to 152 for fusion promotion (13). There was only one amino acid difference, from phenylalanine to tyrosine (F132I), between the BC and LaSota viruses in the proposed F and HN interacting domain, which may be the reason for the heterotypic interaction of the F and HN proteins from distantly related strains of NDV.
It has been proposed that for influenza virus, the NA activity may be important for removing respiratory tract mucin sialic acids, allowing the virus to reach target cells (7). There is a precedent for decreased virulence as a result of decreased NA activity, in influenza viruses in animals (30, 46). In contrast, the C-28 variant of human parainfluenza virus, with deficient NA activity, caused more-intense disease in cotton rats (35). Examination of a temperature-sensitive NDV variant and two sequential revertant viruses revealed that alterations in NA can compensate for alterations in binding (39, 42). The original NDV variant, with an amino acid substitution at position 129, was deficient in binding erythrocytes; a second mutation, at position 175, reduced NA activity but restored binding; the third sequential mutation, at position 193, partially restored NA activity. Thus, the balance between the receptor binding and NA activities appears to be critical to the virulence of NDV. The early induction of CPE in CEF cells by rLaSo BCHN and the diminished CPE of rBC LaSoHN, relative to their parental types with homologous HN, in our study might have resulted from these changes in receptor recognition and NA activities. Increased attachment and NA activities are consistent with the early growth and CPE of those viruses containing virulent HN and with a delay in reaching peak titers and inducing CPE for those viruses containing avirulent HN.
A small amino acid motif in the fusion protein precursor (F0), termed the cleavage site, has been identified as a pathotype determinant. Thus, viruses with multibasic amino acids at the cleavage site are considered virulent, and those characterized by monobasic amino acids at the cleavage site are avirulent (3, 4, 5, 6). Cleavage of F0 polypeptides into F2 and F1 is essential for a virus particle to become infectious (31). In chickens, the F protein of pathogenic NDV is cleaved by ubiquitous intracellular furin-like proteases, and the F protein of nonpathogenic viruses is cleaved only by trypsin-like proteases secreted from a limited number of tissues (12). Thus, virulent viruses can spread rapidly throughout the host and cause disease. In comparison, the avirulent motif can be cleaved only in the respiratory tract and gut, where trypsin-like proteases are available. The replication of these viruses is, therefore, restricted to these organs (31). However, in our studies with chicken embryos, where F proteins with either mono- or multibasic amino acids at the cleavage site are cleaved with equal efficiency due to the availability of trypsin-like proteases, the HN gene sequence appears to determine the tropism of the virus to different tissues and organs. Especially, the discrete replication of viruses with avirulent HN in bronchial and bronchiolar epithelium, the widespread distribution of the viruses with virulent HN in the lung parenchyma, and the systemic distribution of the viruses with virulent type HN in several organs, including the brain, indicate that the HN protein, independently of F protein cleavability, determines viral tropism in chicken embryos. This may be the result of differences in receptor recognition and NA activities between the HN proteins of the BC and LaSota viruses. It would be interesting to study the tropism of these viruses in chickens, where F cleavability may play a major role in virulence via natural routes of infection. A set of carefully defined mutations in the HN protein may indicate the amino acid residues involved in the tropism and virulence of NDV.
The pathogenicity of the chimeric viruses was assessed by ICPI and MDT tests. Interestingly, the results showed that the chimeric rBC virus bearing the HN gene of LaSota (the rBC LaSoHN virus) was markedly less virulent than the parental rBC virus, and the reciprocal chimeric rLaSo BCHN virus was also mildly virulent, compared to its parental rLaSota virus. Chicks inoculated with rLaSo BCHN had lower survival rates than chicks inoculated with rLaSota, and chicks inoculated with rBC LaSoHN had higher survivability than those inoculated with rBC. MDT results also showed a gain of virulence for rLaSo BCHN and a loss of virulence for rBC LaSoHN, relative to rLaSota and rBC, respectively. Thus, when the HN gene of the avirulent LaSota strain replaced the HN gene of the virulent BC strain in the BC virus, the chimeric virus (rBC LaSoHN) showed reduced virulence. Exactly the opposite effect was observed for the chimeric virus rLaSo BCHN, with enhanced virulence. This "gain or loss of function" between the chimeric and parental virus strains was a further indication that the differences observed were associated with the HN protein.
It has been demonstrated previously that the cleavability of the F protein is a major determinant of NDV virulence (32, 33). By creating recombinant NDV in which the V protein has been deleted, researchers have shown that the V protein is an important determinant of virulence (17, 28). These results further support our hypothesis that the virulence of NDV is multigenic. Studies with influenza A viruses have also suggested the multifactorial nature of viral pathogenicity (24, 37).
In summary, using reciprocal HN gene swaps between avirulent and virulent NDV strains in an otherwise identical genetic background, we have demonstrated that the reduced receptor recognition and NA activities inherent to avirulent HN translate into differences in the tropism and virulence of the virus. Chimeric viruses bearing avirulent HN remained restricted in growth to limited tissues and organs, besides being attenuated in virulence relative to the parental type. On the other hand, virulent HN imparted the ability to spread systemically and enhanced the virulence of an otherwise avirulent NDV.
It will be interesting to study the molecular mechanism by which the HN gene determines tropism and virulence. The terminal globular head of the HN protein contains the active sites involved in virus attachment and NA activities (8, 18, 19, 29, 48). Recent results suggest that a specific interaction between the F protein HR2 domain and the HN protein membrane-proximal ectodomain spanning amino acids 124 to 152 occurs for fusion promotion (13). There are only 17 amino acid differences between the HN proteins of the BC and LaSota viruses. The amino acid differences are spread throughout the HN protein. However, most of the differences are present in the globular head region. With the availability of an established reverse-genetics system for avirulent and virulent NDV strains, it would be of special interest to mutate those residues on the HN protein that are involved in its biological functions and observe the effects of these mutations on virus infectivity in vitro and in vivo.
This work was partially supported by U.S. Department of Agriculture grant 2002-35204-1601.
Z.H., A.P., and S.E. contributed equally toward the research work. ![]()
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-D-N-acetylneuraminate) substrate. Anal. Biochem. 94:287-296.[CrossRef][Medline]
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