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Journal of Virology, February 2004, p. 2121-2130, Vol. 78, No. 4
0022-538X/04/$08.00+0 DOI: 10.1128/JVI.78.4.2121-2130.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Induction of Simian AIDS in Infant Rhesus Macaques Infected with CCR5- or CXCR4-Utilizing Simian-Human Immunodeficiency Viruses Is Associated with Distinct Lesions of the Thymus
R. A. Reyes,1 Don R. Canfield,2 Ursula Esser,3 Lourdes A. Adamson,1 Charles R. Brown,4 Cecilia Cheng-Mayer,5 Murray B. Gardner,1 Janet M. Harouse,5 and Paul A. Luciw1,3*
Center for Comparative Medicine,1
California National Primate Research Center,2
Department of Medical Pathology, University of California, Davis, California 95616,3
Laboratory of Molecular Microbiology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, Maryland 20852,4
Aaron Diamond Research Center, The Rockefeller University, New York, New York 100165
Received 17 April 2003/
Accepted 27 October 2003

ABSTRACT
Newborn rhesus macaques were infected with two chimeric simian-human
immunodeficiency virus (SHIV) strains which contain unique human
immunodeficiency virus type 1 (HIV-1)
env genes and exhibit
distinct phenotypes. Infection with either the CCR5-specific
SHIV
SF162P3 or the CXCR4-utilizing SHIV
SF33A resulted in clinical
manifestations consistent with simian AIDS. Most prominent in
this study was the detection of severe thymic involution in
all SHIV
SF33A-infected infants, which is very similar to HIV-1-induced
thymic dysfunction in children who exhibit a rapid pattern of
disease progression. In contrast, SHIV
SF162P3 induced only a
minor disruption in thymic morphology. Consistent with the distribution
of the coreceptors CXCR4 and CCR5 within the thymus, the expression
of SHIV
SF162P3 was restricted to the thymic medulla, whereas
SHIV
SF33A was preferentially detected in the cortex. This dichotomy
of tissue tropism is similar to the differential tropism of
HIV-1 isolates observed in the reconstituted human thymus in
SCID-hu mice. Accordingly, our results show that the SHIV-monkey
model can be used for the molecular dissection of cell and tissue
tropisms controlled by the HIV-1
env gene and for the analysis
of mechanisms of viral immunopathogenesis in AIDS. Furthermore,
these findings could help explain the rapid progression of disease
observed in some HIV-1-infected children.

INTRODUCTION
Neonatal human immunodeficiency virus type 1 (HIV-1) infection
is often associated with a more rapid disease progression and
a higher mortality rate than infection acquired later in life
(reviewed in reference
35). In general, pediatric HIV-1-associated
disease is separable into two distinct modes of clinical progression:
one that is extraordinarily fast and another that approximates
the slower tempo observed in the majority of adults. In this
bimodal distribution of disease, 20 to 30% of children have
an early onset of symptoms at less than 12 months of age and
death within 2 to 3 years. The remaining infected children display
a later onset of symptoms but nevertheless die within 5 to 10
years. Interestingly, most of these long-surviving children
maintain a persistently high viremia and normal CD4
+ lymphocyte
levels for many months following infection (
1,
10,
35); this
clinical picture sharply contrasts with the rapid clearance
of HIV-1 viremia that is typical of adult infection. The sustained
high-level viremia in infected children may result from persistent
viral replication within the progressively expanding lymphoid
cell mass (
24), including the thymus, which represents the principal
source of T lymphopoiesis during early life (
15).
HIV-1 infection of the thymus has been demonstrated in autopsy specimens from infected fetuses and children (19, 33). This finding is consistent with the expression pattern of CD4 as well as the chemokine receptors CXCR4 and CCR5 on thymocytes (4, 21, 31, 38). Taken together with the hyperproliferative state of the neonatal thymus, these findings indicate that this organ may represent a major site for HIV-1 infection and pathogenesis. Indeed, a population of infected children exhibit an immunophenotypic profile similar to that observed in children with the severe congenital thymic defect known as DiGeorge anomaly (22). The pathogenesis of AIDS in this age group may involve virus-induced disruption of the thymic generative microenvironment, leading to a reduction of the postthymic reservoir of peripheral lymphocytes (22). In HIV-1-infected children, markers of thymic dysfunction are predictive of survival outcome (32) and signal the rapid progression to death, independent of viral loads. Thus, the bimodal pattern of disease progression in pediatric AIDS may reflect both the vulnerability of the neonatal thymus and differences in the potential of viral variants for thymic destruction.
Numerous factors, including time and mode of infection and viral heterogeneity and phenotype (cytopathicity and coreceptor utilization), have been correlated with the resultant biological behavior of HIV-1 in the developing thymus. However, practical limitations have hindered detailed studies of the mechanism by which HIV-1 disrupts thymopoiesis in newborn children. Importantly, several in vivo and in vitro systems, including the SCID-hu Thy/Liv mouse, human thymic organ culture, and thymocyte-epithelial cell culture, have provided insight into mechanisms associated with HIV-1-mediated thymic destruction and the establishment of viral latency (4, 6, 7, 20, 23, 31, 38). However, these models have significant limitations because they do not allow for full development of lymphoid organs or the generation of a virus-specific host immune response.
Experimental infection of newborn Asian macaques with selected strains of simian immunodeficiency virus (SIV), or chimeric simian-human immunodeficiency virus (SHIV) causes a fatal AIDS-like disease that closely recapitulates the spectrum of disease in HIV-1-infected children (2, 5, 28, 30). We selected two phenotypically distinct SHIV strains for in vivo studies in infant rhesus macaques: SHIVSF33A utilizes the CXCR4 coreceptor and produces a rapid decline of CD4+ T cells in peripheral blood in both infant and adult macaques, and SHIVSF162P3 utilizes the CCR5 coreceptor and causes depletion of CD4+ T cells in the gastrointestinal tract in adult macaques (14, 28, 29). We report that both of these SHIV strains induce simian AIDS in infant macaques but that each strain is associated with distinct patterns of viral expression and pathology in the thymus. These findings allow for the study of thymic disruption, as well as the analysis of pathogenic mechanisms in other lymphoid organs, in a highly manipulatable animal model for lentivirus infection and AIDS pathogenesis.

MATERIALS AND METHODS
Animals.
Rhesus macaques (
Maccaca mulatta) were colony bred at the California
National Primate Research Center and were born to dams which
were negative for antibodies to SIV, type D retroviruses, and
simian T-cell leukemia virus type 1. Newborns were removed from
their mothers and reared in a primate nursery in accordance
with the American Association for Accreditation of Laboratory
Animal Care standards. Phlebotomies and virus inoculations were
performed with animals anesthetized with ketamine-HCl. Peripheral
blood (0.5 to 1.0 ml in EDTA) was collected immediately before
virus inoculation and regularly thereafter for monitoring viral
and immunological parameters. Complete physical examinations
were performed daily by the California National Primate Research
Center veterinary staff to monitor for weight gain, opportunistic
infections, and other clinical signs of disease. Animals were
euthanatized according to a predetermined timetable or upon
meeting three of the following criteria: (i) weight loss of
>10% in 2 weeks; (ii) chronic diarrhea unresponsive to treatment;
(iii) infections unresponsive to antibiotics; (iv) inability
to maintain body heat or fluids without supplementation; (v)
persistent, marked hematological abnormalities, including lymphopenia,
anemia, thrombocytopenia, or neutropenia; and (vi) persistent,
marked splenomegaly or hepatomegaly.
Viruses and inoculations.
Neonatal macaques were inoculated with 0.5 ml of cell-free virus by the intravenous route between 24 and 48 h postpartum. All viral stocks were quantitated for viral RNA by real-time reverse transcriptase-PCR (RT-PCR) (see below) and for SIV p27gag by enzyme-linked immunosorbent assay (Beckman Coulter, Hialeah, Fla.). SHIVSF33A was prepared by passage in CEMX174 cells as previously described (28). All SHIVSF33A-infected newborns received cell-free virus corresponding to 2.8 x 106 copies of viral RNA and 3.7 ng of SIV p27gag. The variant of SHIVSF162P3 used in this study, designated passage 3, was propagated in human peripheral blood mononuclear cells (PBMC) (14) as well as in rhesus PBMC (Advanced BioScience Laboratories, Kensington, Md.). Neonates Mmu33486, Mmu33493, and Mmu33530 received cell-free SHIVSF162P3 propagated in human PBMC corresponding to 19.4 x 106 copies of viral RNA and 33 ng of SIV p27gag. Neonates Mmu33548, Mmu33554, and Mmu3355 received cell-free SHIVSF162P3 propagated in rhesus PBMC corresponding to 25.7 x 106 copies of viral RNA and 55 ng of SIV p27gag.
Evaluation of T-cell subsets in peripheral blood and plasma viral loads.
Immunophenotypic characterization of peripheral blood lymphocytes was performed with a FACscan flow cytometer (BD Biosciences, San Jose, Calif.) together with monoclonal antibodies specific for CD3 (SP34), CD4 (M-T477), and CD8 (SK1), all obtained from BD Biosciences. Staining was performed with 50 µl of whole blood or purified cells (106 to 107/ml) in phosphate-buffered saline-0.5% bovine serum albumin. Red blood cells were lysed and/or lymphocytes were fixed in 1% formaldehyde with a Coulter T Q-Prep system (Beckman Coulter). Controls consisted of unstained, isotype-stained, and single-color-stained samples to verify the background and specificity of each antibody. Complete blood counts were performed with an ABX Diagnostics Baker 9010 electronic cell counter together with manual enumeration of leukocytes.
Quantitation of virion-associated RNA in plasma was performed by RT-PCR with an ABI Prism 7700 (Applied Biosystems, Foster City, Calif.) and primers specific for SIVmac239 gag, as previously described (26).
Necropsy and tissue collection.
A complete necropsy, which included gross and microscopic examination of all tissues, was performed on each euthanatized animal. Tissues were fixed in 10% neutral buffered formalin and embedded in paraffin. Sections were cut at 6 µm and stained with hematoxylin and eosin for histologic evaluation. The histologic description of simian AIDS was based on severe generalized lymphoid depletion in lymph nodes, spleen, and thymus and detection of opportunistic infections. Histologic grading of the thymus was performed according to the criteria listed in Table 1. To determine the distribution of SHIV RNA, sections were cut at 6 µm and subjected to in situ hybridization.
In situ hybridization.
In situ hybridization was performed as previously described
(
16) with slight modification. In this modified protocol, a
commercially available hybridization solution (S33004; Dako,
Carpinteria, Calif.) was used together with a cocktail of 11
individual digoxigenin-labeled riboprobes. These probes are
complementary to transcripts encoding all SIVmac239 proteins,
with the exception of
env and
nef and exhibited matched hybridization
characteristics. Both sense and antisense riboprobes were generated
by in vitro transcription by using the Ampiscribe T7 and T3
systems (Epicenter Technologies, Madison, Wis.), substituting
2.6 mM digoxigenin-11-UTP (Roche Diagnostics, Indianapolis,
Ind.) and 4.9 mM unlabeled UTP for the recommended 7.5 mM UTP
in the final reaction mixture. To monitor signal specificity,
duplicate tissue sections were prepared and simultaneously hybridized
with 2.5
x 10
-5 M sense or antisense riboprobe cocktail. Hybridized
probe was detected with an antidigoxigenin alkaline phosphatase-conjugated
antibody (Roche Diagnostics) and nitroblue tetrazolium-5-bromo-4-chloro-3-indolylphosphate
(Vector Laboratories, Burlingame, Calif.) substrate. Sections
were counterstained with nuclear fast red. Combined in situ
hybridization and immunohistochemistry was performed as described
previously (
9). This protocol utilized tyramide signal amplification
(fluorescein isothiocyanate-Tyr; Perkin-Elmer, Boston, Mass.)
for the detection of hybridized probes, together with polyclonal
anti-CD3 (Dako) and anti-rabbit immunoglobulin G-Alexa 633 (Molecular
Probes, Eugene, Oreg.) antibodies for immunophenotypic characterization.
Statistical analysis.
Growth rates (weight gained [in grams] per day) were calculated for SHIV-infected neonates and 30 age-matched, uninfected control macaques reared under the same conditions over the first 72 days of life. Estimation of unknown parameters and tests of hypotheses were performed with the MIXED procedure of SAS (2001; version 8.02). For these analyses, weight was treated as a dependent variable and day of life was considered a continuous, independent variable, allowing for the estimation of daily weight gain through simple linear regression.

RESULTS
Induction of AIDS in infant macaques. (i) Rapid induction of AIDS in infant macaques inoculated with SHIVSF33A and SHIVSF162P3.
To evaluate the pathogenesis associated with CXCR4 and CCR5
viruses in the nonhuman primate model of pediatric AIDS, six
newborn rhesus macaques were inoculated with either SHIV
SF33A or SHIV
SF162P3 and monitored over the entire course of disease.
All six infants showed a generalized failure to thrive, which
was confirmed by comparison against pediatric standards of weight
gain and physical development of rhesus macaques (
30). Assessment
of 30 uninfected, age-matched controls (0 to 72 days of age)
reared under similar conditions showed an average daily weight
gain of 6.54 g/day (standard error = 0.04). In contrast, the
weight gain of infants infected with either SHIV
SF33A or SHIV
SF162P3 was 3.92 g/day (standard error = 0.12) over the same age interval.
Importantly, growth rates for SHIV
SF33A-infected infants were
indistinguishable from those of SHIV
SF162P3-infected infants.
However, SHIV
SF33A-infected infants typically exhibited more
severe outward signs of clinical disease, including lethargy,
loss of appetite, diarrhea, dehydration, and icterus.
In four of four SHIVSF33A-infected infants, a profound, synchronous depletion of peripheral blood CD4+ T lymphocytes to <50/µl was observed by 1 to 3 weeks postinoculation (p.i.) (Fig. 1A to D). At euthanasia, CD8+ T cells were <360/µl. In marked contrast, infection with SHIVSF162P3 was associated with only a moderate decline in the absolute number of peripheral blood CD4+ T lymphocytes at 2 to 3 weeks p.i. (Fig. 1E and F). Interestingly, the rebound of CD4+ T-lymphocyte numbers in one infant (Mmu33554), at 5 to 7 weeks p.i., is consistent with the kinetics of CD4+ T-lymphocyte changes in SHIVSF162P3-infected juvenile or adult rhesus monkeys (14). However, a similar rebound was not observed in another SHIVSF162P3-infected infant (Mmu33555) euthanatized at <7 weeks p.i. Furthermore, the absolute frequency of peripheral CD8+ T lymphocytes detected in this infant was suppressed (198 to 683/µl) throughout the entire course of disease, whereas Mmu33554 showed a progressive expansion of this lymphocyte subset to 1,984/µl at the time of euthanasia. In infants infected with either SHIVSF33A or SHIVSF162P3, peak plasma viremia (105 to 107 copies of RNA/ml) was detected by 2 weeks p.i., concomitant with the initiation of peripheral CD4+ T-lymphocyte decline (Fig. 1). Furthermore, both groups of animals maintained high levels of plasma viremia throughout the entire disease course. Antiviral plasma immunoglobulin G, based on enzyme-linked immunosorbent assay with whole SIVmac251 (27), was not detected in either SHIVSF33A- or SHIVSF162P3-inoculated infants over the entire course of disease (data not shown). These serological results contrast the SIV-specific antibody response observed within 10 weeks following perinatal infection with the less pathogenic SIV molecular clones mac239 and mac1A11 (30), further illustrating the inability of these SHIV-infected infants to combat opportunistic infections (see below). In summary, within 7 to 14 weeks p.i., all SHIVSF33A- and SHIVSF162P3-infected infants exhibited deteriorating health consistent with simian AIDS.
(ii) Histopathologic findings in SHIV-infected infants exhibiting AIDS.
At necropsy, all SHIV-infected infants (
Mmu32627,
Mmu32629,
Mmu32631,
Mmu32632,
Mmu33554, and
Mmu33555) showed histopathologic
lesions associated with simian AIDS, including generalized severe
lymphoid depletion of peripheral and alimentary lymph nodes
and spleen, and opportunistic infections (e.g., cytomegalovirus,
adenovirus,
Candida albicans, and
Cryptosporidium) (Table
2).
Comparative histopathology revealed few significant differences
in the presence and severity of lesions associated with SHIV
SF33A and SHIV
SF162P3 infection; however, a marked distinction in
thymic pathology was observed between the two groups of SHIV-infected
infants.
In all SHIV
SF33A-infected infants, very little thymic tissue
was discernible at the gross level. Microscopic examination
showed a pattern of lesions consistent with thymic dysinvolution
(
19), characterized by cortical ablation and severe lymphoid
depletion of the medulla, with only patchy aggregates of lymphocytes
remaining on a stromal-histiocytic background. Although the
location and configuration of blood vessels appeared normal,
Hassell's corpuscles were rarely observed (Fig.
2B). In contrast,
lesions of the thymus were less severe in both SHIV
SF162P3-infected
infants. Compared to the thymus from an uninfected control infant
(Fig.
2A), lesions associated with SHIV
SF162P3 infection were
characterized by only a moderate decrease in cortical thickness
and density and a slight reduction of medullary lymphoid cells
(Fig.
2E and H). A potential explanation of the difference in
thymic pathology associated with these SHIVs is provided by
the detection of productively infected cells by using RNA in
situ hybridization. A striking difference in the pattern of
viral RNA expression was observed within the thymi of SHIV
SF33A-infected
neonates compared to SHIV
SF162P3-infected neonates. Expression
of SHIV
SF33A RNA was most evident within large blastoid cells
distributed evenly throughout the thymic lobule (Fig.
2C and D).
By using combined in situ hybridization and immunohistochemistry,
these highly infected thymocytes were determined to be of the
T-cell lineage (Fig.
2G). In SHIV
SF162P3-infected infants, the
detection of viral RNA was restricted to smaller cells, consistent
with lymphocytes, in the thymic medulla (Fig.
2F, I, and J).
Acute infection of neonates. (i) Kinetics of viral replication and T-cell depletion in SHIV-infected neonates.
To evaluate the differential pathogenesis of these viruses on
the neonatal thymus during acute infection, we inoculated four
additional newborns with SHIV
SF33A and four newborns with SHIV
SF162P3.
Between 15 and 17 days p.i., all eight neonates were euthanatized.
In SHIV
SF33A-infected neonates, peak viremia was attained between
8 and 10 days p.i. (Fig.
3A to D, shaded areas), concurrent
with a dramatic decline in the percentage as well as the absolute
number of peripheral blood CD4
+ T lymphocytes. However, semiweekly
assessment revealed that this decline was initiated prior to
the attainment of peak viremia. Interestingly, the more rapid
replication of SHIV
SF162P3, with peak plasma viremia between
5 and 7 days p.i. (Fig.
3E to H, shaded areas), is reminiscent
of the replication kinetics of SIVmac239 in infant rhesus macaques
(
36).
(ii) Thymic pathology in neonatal macaques following acute infection with SHIVSF162P3 and SHIVSF33A.
The grading system to evaluate thymic histopathology is shown
Table
1. Overall, the histopathologic alterations of the thymus
from SHIV
SF162P3-infected neonates were mild (grades 1 and 2),
with various degrees of cortical thinning and slight depletion
of both cortical and medullary thymocytes. In comparison, the
pathologic changes of the thymus associated with SHIV
SF33A were
more severe (grades 3 and 4), ranging from moderate lymphoid
depletion to precocious involution (
19), manifested by a marked
paucity to virtual absence of cortical thymocytes and blurring
to loss of corticomedullary demarcation. In the most severe
case, that of a SHIV
SF33A-infected neonate which died from simian
AIDS at 16 days p.i. (Fig.
4, panel 4), a single Hassell's corpuscle
abuts the thymic capsule (arrow), illustrating the gravity of
cortical disruption associated with this virus.
(iii) Patterns of viral expression in the thymus following acute infection with SHIVSF162P3 and SHIVSF33A.
In SHIV
SF162P3-infected neonates, viral expression was highly
restricted to lymphocytes resident in the thymic medulla (Fig.
5C), with only a few (<5%) productively infected cells scattered
throughout the cortex. This pattern is similar to previous descriptions
of SIVmac239 and SIVmac251 infection in infant and adult rhesus
macaques (
25,
36) and to SHIV
SF162P3-infected infants in the
latter stages of disease (see above). In contrast, SHIV
SF33A was detected predominantly within thymocytes of the inner cortex
(Fig.
5A). A few productively infected cells were dispersed
throughout the cortex and within the medulla; however, this
variation in the pattern of SHIV
SF33A RNA detection was not
correlated to the degree of thymic involution.
To study the pathway of SHIV
SF33A dissemination within the thymus,
we evaluated the histopathology and pattern of viral distribution
within the thymi from an additional group of three infant macaques.
These infants were inoculated with SHIV
SF33A as described above
(see Materials and Methods) and were euthanatized between 32
to 38 days p.i. The patterns of CD4
+ T-cell depletion and viral
replication in these infants were indistinguishable from those
described above for SHIV
SF33A infection (data not shown). Thymic
tissue was detected grossly in all three infants and was characterized
microscopically by moderate to severe cortical and medullary
lymphoid depletion. Evaluation of viral RNA distribution showed
that the majority of productively infected cells were resident
in the thymic cortex (Fig.
5B). However, unlike the pattern
of infection observed between 15 and 17 days p.i., the number
of infected cells was both increased and evenly distributed
throughout the thymic cortex.

DISCUSSION
This study demonstrated that simian AIDS was rapidly induced
in infant rhesus macaques following perinatal infection with
either SHIV
SF162P3 or SHIV
SF33A. However, each of these pathogenic
SHIVs exhibited divergent effects on the peripheral CD4
+ T-lymphocyte
pool and on the thymus, coincident with the development of simian
AIDS. The hematological profile of SHIV
SF33A-infected infants,
showing profound depletion of CD4
+ lymphocytes in the periphery,
was similar to that of HIV-1-infected children with rapidly
progressing disease; such children are defined as thymic dysfunctional
(
20,
22,
32). In contrast, the levels of CD4
+ lymphocytes in
the periphery were not profoundly depleted in SHIV
SF162P3-infected
infants. Because the thymus is the primary source of T lymphopoiesis
during early life, differences in the thymic pathology observed
in SHIV
SF162P3- and SHIV
SF33A-infected infants suggest that
infection of this organ is central to mechanisms by which these
viruses induce disease. In all SHIV
SF33A-infected infants that
were allowed to progress to fatal AIDS, the severity of lesions
was consistent with acquired thymic dysplasia in children with
congenital HIV-1 disease (
19). In contrast, the histopathologic
alterations of the thymus in SHIV
SF162P3-infected infants were
mild and similar to acute involution in HIV-1-infected children
(
19) and to those previously described in infant macaques infected
with SIVmac239, a virus also utilizing the CCR5 coreceptor (
36).
These differences in pathogenesis as well as tissue tropism
of SHIV
SF33A and SHIV
SF162P3 within the thymus are consistent
with the expression patterns of CXCR4 and CCR5 on developing
thymocytes. Studies of thymocyte development within the human
fetus as well as adult rhesus macaques have demonstrated that
CXCR4 is highly expressed on immature T-cell progenitors resident
to the thymic cortex. This CXC chemokine is down regulated during
thymocyte differentiation and transit across the corticomedullary
junction, whereas CCR5 is expressed predominately on mature,
medullary thymocytes (
4,
21,
38,
39).
Our results provide the basis for a model in which the immunodeficiency induced by perinatal infection of macaques with SHIVSF162P3 and SHIVSF33A may result from disruption of thymopoiesis. However, the mechanisms by which these two viruses impair T-cell development appear to be different. These mechanisms, which could include direct cell killing, blockade of development, or the defective generation and maturation of T cells, appear to be dependent on the populations of thymocytes infected by each virus. Accordingly, differences in T-cell depletion associated with SHIVSF33A and SHIVSF162P3 may reflect the more ubiquitous expression of CXCR4 in the thymus compared to CCR5. A similar situation has been described for human lymphoid organ culture, in which there was no intrinsic difference between the cytopathicities of CCR5- and CXCR4-utilizing HIV-1 variants towards their cognate CD4+ T-lymphocyte targets (13). However, the severe loss of T lymphocytes associated with SHIVSF33A infection may not be explained strictly on the basis of direct killing of productively infected cells. Rather, we suggest that the depletion of immature CXCR4+ thymocytes imposes a bottleneck or blockade of thymopoiesis, which ultimately leads to the exhaustion of mature T cells. In contrast, the underlying cause of immunodeficiency in SHIVSF162P3-infected infants appears to result from the defective generation and maturation of T cells, a scenario which could be explained by virus-induced change in major histocompatibility complex (MHC) class I expression. In support of this notion, Rosenzweig et al. showed that infection of neonatal macaques with SIVmac239 was correlated to the global modulation of MHC class I within the thymus (36). Indeed, the generation of dysfunctional CD8+ cells in HIV-1-infected children is believed to result from the dysregulation of MHC class I in the thymus (20).
Our findings with monotropic SHIVs raise intriguing questions with regard to the mechanisms by which other chimeric SHIVs are believed to induce immunodeficiency. For example, SHIVDH12R, a dualtropic (CCR5/CXCR4), acutely pathogenic virus, causes profound depletion of peripheral CD4+ cells and primarily targets the thymic medulla (18). In contrast, SHIVSF33A clearly showed localization to the thymic cortex throughout the course of infection. Studies on the dualtropic SHIV89.6 and its pathogenic derivatives indicate that the fusogenic potential of the env gene is directly related to virus load and pathogenicity of virus in adult macaques (11, 12). Interestingly, both SHIVSF162P3 and SHIVSF33A established similar levels of plasma viremia and rapid progression to AIDS, although the former virus contained an env gene that was less fusogenic than the latter (8, 17). Taken together, these findings suggest that the biological behavior of dualtropic viruses may be different from that of either CCR5 or CXCR4 monotropic strains.
In HIV-1-infected infants, it has been difficult to study the influence of viral phenotype on AIDS. Although disease progression has been ascribed to the evolution of virus, leading to an escape of CCR5-utilizing strains from antiviral C-C chemokine control (37), the relative in vivo pathogenicities of CCR5- and CXCR4-tropic viruses has not been well defined. Diverse strains of HIV-1 which utilize CXCR4 and/or CCR5 have been isolated from newborn children who rapidly progressed to AIDS (34). Nevertheless, the viral isolates detected during the asymptomatic stages of disease generally use only CCR5 as a coreceptor (37). Importantly, in HIV-1-infected children the characterization of the viral phenotype has been based largely upon the determination of coreceptor utilization of variants isolated from peripheral or cord blood cells. This approach may not accurately predict the phenotype of the original founding virus, further illustrating the need for animal models to evaluate the role of properties, governed by the env gene, in the induction of fatal immunodeficiency.
The SCID mouse engrafted with human thymic tissue has been used to investigate the influence of viral phenotype on the mechanisms by which HIV-1 affects T-cell development and function. By using this xenograft model, a dichotomy in the pattern by which CCR5- and CXCR4-tropic viruses infect the thymus has been demonstrated (3, 21, 38). This pattern is presumably dictated by the expression of cognate viral receptors on discrete thymocyte subsets, whereby CCR5-utilizing viruses are restricted to the medulla and CXCR4-tropic stains infect cells within both the cortex and medulla (3). These differences in viral tropism in the thymus have been correlated to the degree of organ destruction and the potential establishment of viral latency within naïve T cells (3, 6). Although the SCID-hu mouse allows for human thymopoiesis (31), this model may not accurately recapitulate the complete pathogenic spectrum in HIV-1-infected children. This is exemplified by the observation that virus loads in the SCID-hu reconstituted thymus are higher than those measured in vivo in the infected human thymus, probably because an antiviral host immune response is absent in the SCID-hu model (6).
Our analysis of the thymic pathology and viral expression in SHIVSF162P3 and SHIVSF33A infection in infant rhesus macaques supports and extends previous studies in the xenograft mouse model of HIV-1-induced thymic disruption. Importantly, our studies with this immunologically intact host also showed a dichotomy, related to expression of cognate coreceptors on thymocytes, in the pattern of expression of phenotypically distinct SHIVs within the thymus. Recent studies have addressed phenotype and function of developing T cells in SHIV-infected infants, with an emphasis on defining precursor populations and assessing migratory potential of thymocytes in response to chemokine signals (U. Esser et al., unpublished data). Future studies can aim to determine whether the differential pathology of SHIVSF162P3 and SHIVSF33A infection is related to virus-specific alterations of immunomodulatory proteins (e.g., cytokines and chemokines) in the host. Thus, the pediatric AIDS model in macaques can now be used to address the role of the viral env gene in mechanisms of immunodeficiency, including depletion and dysfunction of thymocytes as well as peripheral blood T lymphocytes.

ACKNOWLEDGMENTS
We thank Marta Marthas and Kim Schmidt for providing growth
rate data for control neonatal macaques; Thomas Famula for providing
statistical analysis; Abigail Spinner for performing flow cytometry
assays; Christian Leutenegger for real-time RT-PCR; and Christopher
Miller, Marta Marthas, and Ross Tarara for advice and encouragement
on experimental design and data interpretation. R. A. Reyes
acknowledges Helen M. Doughty for literature review and retrieval.
The research in this paper was supported by a grant from the Elizabeth Glaser Pediatric AIDS Foundation (51050-25-PG) and utilized resources from the California National Primate Research Center, which is supported by an NIH grant (RR-00169).

FOOTNOTES
* Corresponding author. Mailing address: Center for Comparative Medicine, University of California, Davis, CA 95616. Phone: (530) 752-3430. Fax: (530) 752-7914. E-mail:
paluciw{at}ucdavis.edu.


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Journal of Virology, February 2004, p. 2121-2130, Vol. 78, No. 4
0022-538X/04/$08.00+0 DOI: 10.1128/JVI.78.4.2121-2130.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
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