Previous Article | Next Article ![]()
Journal of Virology, June 2004, p. 6013-6023, Vol. 78, No. 11
0022-538X/04/$08.00+0 DOI: 10.1128/JVI.78.11.6013-6023.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Cell Biology Program, Memorial Sloan-Kettering Cancer Center, and Graduate Program in Cell Biology and Genetics, Weill Graduate School of Medical Sciences of Cornell University, New York, New York 10021
Received 13 October 2003/ Accepted 24 January 2004
|
|
|---|
|
|
|---|
The late stage of virus assembly, which involves the budding and release of particles from the cell, is mediated by the L domain, a short peptide motif within Gag (13). Recently, several proteins involved in endocytic and/or lysosomal degradation pathways, including Tsg101 (11, 42), Nedd4 (16, 37), AIP1 (38), and AP-2 (34), have been shown to bind L domains. All of these proteins are involved in the sorting of cellular proteins into internalization and/or lysosomal degradation pathways. For example, the L domain of human immunodeficiency virus type 1 (HIV-1) Gag consists of a PTAP sequence that binds to Tsg101, a protein required for the recognition and sorting of ubiquitinated membrane proteins into the internal vesicles of multivesicular bodies (MVBs) (3, 6). These vesicles arise from the inward budding of the lumenal membrane of the MVB, a process that is topologically identical to the outward budding of enveloped viruses from the plasma membrane, i.e., away from the cytoplasm (31). Interaction of HIV-1 Gag with Tsg101 and other components of the MVB ESCRT complex is required for efficient particle production (11, 13). In macrophages, HIV-1 Gag is present on and buds from internal membranes that resemble MVBs (28, 32, 33, 35). However, in T cells and most permissive tissue culture cell lines, HIV-1 Gag is primarily localized to the plasma membrane, the site for virus assembly and release (7, 15, 26, 29, 30, 32). It is not known how Gag recruits MVB proteins to the plasma membrane, and it is not understood how Gag is targeted to MVBs in macrophages. We hypothesized that Gag itself may undergo endocytosis as a trafficking step between the plasma membrane and MVBs.
In order to investigate the potential interface between HIV-1 Gag and the endosomal pathway, we tested whether Gag contains endocytosis motifs. A chimeric protein was generated by fusing the extracellular and transmembrane domains of human CD4 to Gag. CD4 contains a well-defined endocytosis signal in its cytoplasmic tail (2, 36). Replacement of this tail with Gag allowed us to test for the presence of trafficking signals within Gag, particularly endocytosis signals. Here, we show that the Gag sequence acts to increase internalization of the fusion protein. The region of Gag responsible for increased internalization was mapped to the C-terminal domain of capsid (CA), the p2 spacer peptide, and nucleocapsid (NC). This region contains a number of motifs that resemble well-characterized endocytosis signals. We generated point mutations of each of these potential signals and identified a dileucine-like motif required not only for the rapid internalization of the fusion protein but also for the assembly and release of VLPs.
|
|
|---|
DNA plasmids. The Rev independent Gag expression vectors pCMV5 Gag and pGagGFP have been discussed elsewhere (15, 41). pEGFP-N2 CD4FL (expressing full-length human CD4) and pCD4T().GFP and pCD4T().UL11 (expressing fusion proteins of tailless CD4 with GFP or herpesvirus UL11 proteins, respectively) were kind gifts from John Wills (Pennsylvania State University College of Medicine, Hershey, Pa.) (20). pcDNA3 CD4T() expresses a truncated CD4 protein lacking an internalization signal. Other CD4 fusion constructs were generated by subcloning PCR products in frame into the BamHI and NotI sites of pCD4T().GFP. Point mutations within the Gag sequence were generated by PCR. pSVL dynamin-2 bb myc and pSVL K44E dynamin-2 bb myc were kind gifts of Enrique Rodriguez-Boulan (Weill Graduate School of Medical Sciences, New York, N.Y.).
Cell culture and transfections. COS-1 cells were maintained in 10% fetal bovine serum in Dulbecco modified Eagle medium. For transfections, COS-1 cells were seeded to approximately 50% density and transfected the following day with 3 to 5 µg of plasmid DNA by using Lipofectamine 2000 (Gibco BRL Life Technologies, Carlsbad, Calif.).
Enzyme-linked immunosorbent assay-based internalization (ELISAint) assay. One day following transfection, COS-1 cells were seeded onto 24-well trays to approximately 50% density. The following day, the trays were placed on ice, the media were removed, and the cells were washed twice with 1 ml of ice-cold phosphate-buffered saline (PBS) with 3% (wt/vol) BSA (PBS-BSA). The cells were then incubated for 1 h in 200 µl of PBS-BSA containing 0.37 µg of Leu-3a MAb/ml to label surface CD4. After three washes in PBS-BSA, Dulbecco modified Eagle medium plus 10% fetal bovine serum was added and the cells were incubated at 37°C for various lengths of time (either 20 and 60 min or 5, 10, and 20 min). At the indicated times, the trays were put back on ice and washed twice with ice-cold PBS along with a tray that had remained on ice (the 0-min time point). Cells were then fixed for 20 min in PBS containing 3.7% paraformaldehyde on ice. This step was followed by two washes with PBS-BSA. The remainder of the experiment was performed at room temperature. Cells were then incubated for 1 h in 200 µl of PBS-BSA containing horseradish peroxidase-conjugated sheep anti-mouse secondary antibody (Amersham Biosciences, Piscataway, N.J.) to label Leu-3a MAb remaining at the surface. Cells were then washed extensively with PBS. Horseradish peroxidase activity was detected by the addition of 250 µl of TMB to each well and incubation from 10 to 30 min at room temperature or 37°C followed by the addition of 1 N HCl to stop the reaction and to oxidize the detection reagent. The A450 of each sample was measured with a spectrophotometer. For each experiment, a set of cells were transfected with an arbitrary plasmid (usually pEGFP-N1 [BD Biosciences Clontech, Palo Alto, Calif.]) in order to measure nonspecific binding of Leu-3a at the initial time point (t0). The value obtained was subtracted from the other values to calculate specific binding of the antibody, giving a measure of the amount of CD4 present on the cell surface at each time point. The percentage of internalization for each time point (tn) was calculated as 1 (amount of CD4 at tn/amount of CD4 at t0).
Analysis of VLP production. VLPs were isolated and analyzed by anti-Gag Western blotting as previously described (18) except that media were clarified by passage through a 45-µm-pore-size filter before they were loaded onto the 20% sucrose cushion. For some experiments, VLP production was measured by the release of 35S-labeled Gag into the culture media as previously described (19).
Fluorescence microscopy. Transfected COS-1 cells were grown on coverslips and processed 48 h postransfection (15). Cells were incubated with a 1:500 dilution of anti-EEA1 or anti-CD63 MAbs in PBS for 90 min after fixation and permeabilization or with 0.74 µg of Leu-3a anti-CD4 MAb/ml without permeabilization to label surface CD4. Following four 5-min washes in PBS, cells were incubated with or Alexa Fluor 488- or Alexa Fluor 594-conjugated goat anti-mouse antibodies (Molecular Probes) for 45 min. Cells were then washed four times for 5 min each time with PBS and mounted on microscope slides. Enhanced green fluorescent protein fluorescence was visualized directly. For some experiments, cells were pretreated for 16 h with 3 µg of U18666A/ml in culture media prior to fixation and preparation for microscopy. Laser scanning confocal microscopy was performed with a Zeiss LSM510 confocal microscope equipped with an Axiovert 100 M inverted microscope with a x63, 1.2-numerical-aperture water immersion lens for imaging as previously described (15). Filipin staining and detection was performed according to the method of Tabas et al. (40), with the exception that excitation was achieved with a UV laser (364 nm) and emission was detected with a 385- to 470-nm band-pass filter. Texas Red-transferrin was used according to the manufacturer's specifications. Colocalization was measured by using MetaMorph software (Universal Imaging Corp., Downingtown, Pa.). Image areas were chosen, and the extent of overlap between red and green colors was calculated by the program on a pixel-by-pixel basis weighted by intensity overlap.
Visualization of internalized anti-CD4. To visualize internalized anti-CD4, cells expressing CD4T().Gag and grown on coverslips were fed 0.37 µg of Leu-3a anti-CD4 MAb/ml for 2 h and fixed in paraformaldehyde. The cells were then stained with Alexa Fluor 488 (green) goat anti-mouse before permeabilization. After permeabilization to allow access of the secondary antibody to internalized Leu-3a, the cells were stained with Alexa Fluor 594 (red) goat anti-mouse.
|
|
|---|
![]() View larger version (12K): [in a new window] |
FIG. 1. Internalization of a CD4-Gag fusion protein. (A) A schematic of CD4, tailless CD4 [CD4T()], and CD4 fusion [CD4T().ORF] proteins. The amino acid sequence of the cytoplasmic tail domain (CT) is shown with the dileucine internalization motif underlined and italicized. EC, extracellular domain; TM, transmembrane; ORF, any sequence appended to CD4T(). (B) Percentage of surface-bound anti-CD4 internalized over the indicated time course by cells expressing CD4 (filled squares), CD4T() (filled diamonds), CD4T().UL11 (open circles), or CD4T().GFP (open triangles). Data are means ± standard errors of the means for quadruplicate experiments repeated three to five times. For CD4 and CD4T(), the cells were treated with 50 ng of PMA/ml. (C) Internalization of CD4T().Gag (open squares) compared to that of CD4T() (filled triangles). Data represent means ± standard errors of the means for five to seven quadruplicate experiments.
|
![]() View larger version (26K): [in a new window] |
FIG. 2. (A) Comparison of VLP production by Gag and that by CD4T().Gag. Lysates from cells expressing Gag or CD4T().Gag were collected, and VLPs were purified from the tissue culture media after 24 h of incubation. Aliquots of each lysate were assayed for the presence of Gag protein by Western blotting with anti-p24CA. The wild-type Gag band is labeled Pr55 Gag. CD4T().Gag migrates at 110 kDa. The asterisk indicates an anti-p24CA reactive band that is occasionally seen in CD4T().Gag cell lysates. This is probably a degradation product of the fusion protein. (B) Internalization of anti-CD4 MAb by COS-1 cells expressing CD4T().Gag. After the uptake of anti-CD4, cells were stained with a green fluorophore prior to permeabilization to detect surface MAbs as described in Materials and Methods. After permeabilization, internalized MAbs were stained with a red fluorophore.
|
![]() View larger version (58K): [in a new window] |
FIG. 4. Surface expression and internalization of CD4 fusion proteins. (A) CD4 fusion proteins on the surfaces of cells were detected by indirect immunofluorescence without permeabilization. (B) Internalization of CD4T().DsRed fusion proteins. Filled squares, CD4; filled diamonds, CD4T(); open squares, CD4T().Gag; open triangles, CD4T().GFP; open circles, CD4T().DsRed (solid lines) and CD4T().dbl DsRed (dashed lines). Data are means of the results for two to four quadruplicate experiments.
|
![]() View larger version (36K): [in a new window] |
FIG. 3. Mapping of endocytosis signals within Gag. (A) Internalization of anti-CD4 by cells expressing selected CD4T() fusion proteins. Data are means for two to seven quadruplicate experiments. (B) Schematic representation of the set of CD4T() fusion proteins used to map internalization determinants within the Gag sequence. The locations of the matrix (MA), CA, (NC, and p6 domains are indicated by shaded boxes. Gag residue numbers for the beginning and end of each fusion construct are shown. A fast rate of internalization is relative to that for CD4T(). (C) The amino acid sequence of the minimal internalization sequence of Gag, which includes the C-terminal portion of CA, p2, and NC (residues 279 to 432 of Gag). Potential endocytosis signals are underlined and italicized. Residues that have been mutated in this study are indicated by asterisks. (D) Internalization CD4T().Gag point mutations. Filled diamonds, CD4T(); open squares, CD4T().Gag; filled triangles, CD4T().Gag(Y301K); open triangles, CD4T().Gag(LL321,322AA); gray triangles, CD4T().Gag(IL-333,334AA). Data represent means ± standard errors of the means for two to seven quadruplicate experiments.
|
An alternative hypothesis is that a specific internalization signal is present within residues 279 to 432 of Gag. These signals are generally tyrosine based (NPXY or YXX
, where
is a bulky hydrophobic residue) or leucine based (D/EXXLL or D/EXXXLL; leucines are occasionally replaced with methionine or isoleucine, and acidic residues are occasionally replaced or in conjunction with serine or threonine) (8). Three such sequences are present in the minimal domain (Fig. 3C). Point mutations disrupting each of these potential signals were generated within CD4T().Gag, and the internalization rates of these mutations were measured. Mutation of either LL321,322 or IL333,334 within Gag inhibited internalization of the chimera, whereas mutation of Y301 had no effect (Fig. 3D). Thus, potential internalization signals may be present in the dileucine-like sequences. These residues and the acidic and/or hydrophilic residues upstream of them are highly conserved in all clades of HIV-1 as well as in primate lentiviruses.
We next proceeded to determine whether mutations of the LL, IL, and YXX
motifs affected the ability of Gag to form VLPs (Fig. 5A). The three mutations described above (Y301K, LL321,322AA, and IL-333,334AA) were generated in the context of full-length Gag protein, and the mutated proteins were expressed in COS-1 cells. The Y301K mutation had little or no effect on VLP production compared to that in wild-type Gag. In contrast, disruption of either LL321,322 or IL-333,334 almost completely abolished VLP production. We then tested whether either of the defective mutants could be rescued by coexpression with wild-type Gag protein. Such rescue experiments have been performed successfully with membrane-binding or late-domain-deficient mutants and indicate whether the mutants are still capable of assembly, as opposed to membrane binding or particle release (21, 24). The mutants were expressed in conjunction with wild-type GagGFP, a fusion construct which forms VLPs at an efficiency equivalent to that of wild-type Gag. GagGFP migrates at
80 kDa and is readily distinguishable from the 55-kDa Gag mutations on Western blots. The mutant Gag proteins produced increased levels of VLPs when coexpressed with GagGFP (Fig. 5B) but produced few or no VLPs when coexpressed with a GFP control protein. The extent of rescue was similar to that for the nonmyristoylated G2A Gag mutant, which did not produce VLPs when coexpressed with GFP but could be isolated in VLPs at 5 to 10% of the efficiency of wild-type GagGFP when these two proteins were coexpressed (Fig. 5). These results indicate that the mutant proteins are still capable of interacting with wild-type Gag, which complements their assembly defect(s).
![]() View larger version (21K): [in a new window] |
FIG. 5. VLP production of wild-type Gag and Gag with Y301K, LL321,322AA, and IL-333,334AA mutations. (A) Cell lysates and purified VLPs from cells expressing wild-type Gag or the indicated mutations were subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis and Western blotting with anti-Gag antibodies. (B) Partial rescue of defective Gag mutations by a wild-type Gag protein. Western blots are of a VLP assay of cells coexpressing Gag point mutations and GagGFP (+) or GFP as a negative control (). Mutated Gag proteins are 55 kDa (lower arrows). GagGFP is 80 kDa (upper arrows). Bands indicated by asterisks are apparently degradation products of GagGFP. (C) Quantification of VLP release. Open bars represent VLP release (ratio of Gag signal from VLP fraction to signal from cell lysate) from cells coexpressing Gag mutations and GFP. Closed bars represent VLP release from cells coexpressing Gag mutants and wild-type GagGFP. Each release value is a percentage of the VLP release of GagGFP. Data are means ± standard errors of the means for two to four duplicate experiments.
|
![]() View larger version (39K): [in a new window] |
FIG. 6. Distribution of GagGFP and early endosomal markers. (A) GFP fluorescence of cells expressing wild-type GagGFP or the indicated mutations. (B) GagGFP fluorescence is depicted in green (left), endosomal markers are depicted in red (middle), and the overlay of the two images is depicted on the right. Colocalization is visible as yellow. EEA1 was detected by indirect immunofluorescence with an anti-EEA1 MAb. The lower panels represent cells that were incubated with Texas Red-transferrin for 1 h. This treatment labels early endosomes and the endosomal recycling compartment.
|
|
View this table: [in a new window] |
TABLE 1. Membrane binding of Gag and Gag point mutants
|
If Gag enters the endocytic pathway by internalization from the plasma membrane, it should be possible to alter the steady-state distribution of Gag by altering the function or composition of specific components of the endocytic system. Coexpression of Gag with dominant-negative (K44E) dynamin had no apparent effect on Gag localization or VLP production (not shown), suggesting that Gag does not internalize via clathrin-coated pits or other dynamin-dependent structures. In addition, treatment of cells with 50 mM NH4Cl, an inhibitor of endosomal acidification, had no effect on VLP production (data not shown). We therefore employed another approach to altering the endocytic pathway by altering the distribution of cholesterol within endocytic compartments. There is ample evidence to support a role for membrane cholesterol in HIV-1 assembly. Most of the cholesterol is concentrated in the plasma membrane. The remainder is asymmetrically distributed in endosomes (14), with particularly high concentrations of cholesterol in MVBs (23). Treatment of cells with the drug U18666A causes marked redistribution of cholesterol from the plasma membrane to the MVBs (22) and results in late endosome/MVB sorting defects (17). When COS-1 cells were treated with U18666A, a striking accumulation of Gag in CD63-positive enlarged MVBs was observed (Fig. 7A and B). In contrast, the Gag(IL-333,334AA)-GFP mutation did not undergo redistribution in response to U18666A, indicating that a functional internalization signal is required for Gag to associate with MVBs. The fluorescent staining pattern of filipin, which detects cholesterol, was shifted to a perinuclear compartment in U18666A-treated cells (Fig. 7C), thereby confirming that the drug induced cholesterol redistribution. However, treatment of cells with U18666A had no apparent effect on the amount of VLP production by wild-type Gag (Fig. 8A and B). Since most of the Gag in U18666A-treated cells is in MVBs and since virus particles are still being produced, these results suggest that the budding of particles into MVBs can occur in COS-1 cells.
![]() View larger version (28K): [in a new window] |
FIG.7. The presence of Gag on CD63-positive late endosomes in cells treated with U18666A. (A) GFP fluorescence of cells expressing GagGFP or Gag(IL-333,334AA)-GFP is depicted in the left panels, anti-CD63 immunofluorescence is depicted in the middle panels, and the overlay of red and green fluorescence is depicted in the right panels with colocalization appearing as yellow. The indicated images are from cells treated with U18666A. (B) Colocalization of GagGFP or Gag(IL-333,334AA)-GFP in control cells (open bars) or U18666A-treated cells (filled bars) as determined by analysis of confocal images of 6 to 18 cells for each condition. Means and standard deviations are depicted. (C) Filipin fluorescence of control and U18666A-treated cells detected by confocal microscopy.
|
![]() View larger version (24K): [in a new window] |
FIG. 8. VLP production in cells treated with U18666A. (A) Gag was immunoprecipitated from 35S-labeled cells treated or untreated with U18666A and from VLPs collected after 4 h of labeling. (B) Quantification of results shown in panel A. Data are means ± standard errors of the means for two duplicate experiments.
|
|
|
|---|
The region of Gag that promoted rapid internalization of a CD4-Gag chimera contained the C-terminal domain of CA, p2, and NC. This same region also promotes the multimerization of Gag. Experiments performed with CD4T() fused to DsRed, a protein with a well-documented ability to form tetramers (4, 44), suggest that multimerization alone is not sufficient to drive rapid internalization of CD4 chimeras. As depicted in Fig. 4A, despite the presence of large aggregates of CD4T()DsRed constructs on the cell surface, increased rates of internalization for these chimeras were not observed. It does, however, remain possible that the CD4-DsRed constructs are not themselves multimerized but, rather, are associated with large cellular aggregates. Thus, the possibility that, within the context of Gag, multimerization may play a role in internalization remains.
Gag containing the LL321,322AA mutation was defective for membrane binding, which may in part be due to decreased multimerization. In contrast, membrane flotation analysis as well as confocal imaging indicated that the IL-333,334AA mutant was clearly plasma membrane bound, in the contexts both of Gag itself and a CD4T()Gag chimera. Several lines of evidence support the notion that IL-333,334AA Gag is also capable of forming Gag-Gag multimers. This construct could be rescued into VLPs by coexpression with wild-type GagGFP. The extent of rescue was as great as or greater than that observed for the rescue of nonmyristoylated G2A Gag into VLPs by wild-type GagGFP (Fig. 5). Moreover, the localization patterns of IL-333,334AA Gag as well as the CD4T()IL-333,334AA Gag chimera were clearly punctate, consistent with the presence of multimerized Gag (19). It remains possible that the IL-333,334AA mutant has a subtle effect on multimerization that cannot be detected by these individual assays. Alternatively, the defect in VLP production exhibited by IL-333,334AA Gag could be due to defective association with components of the endocytic pathway.
There are at least three well-described mechanisms for internalizing proteins and lipids from the plasma membrane, including endocytosis via clathrin-coated pits, caveolae, and rafts. Our finding that coexpression of Gag with dominant-negative dynamin had no effect on Gag localization or VLP production implies that Gag internalization does not proceed via clathrin-coated pits or caveolae. Disruption of lipid rafts by treatment of cells with cyclodextrins is known to inhibit viral particle production (27). However, rafts are required for the HIV-1 assembly process (19, 27), and it is not known whether the cyclodextrin effect is due to the inhibition of raft- and/or non-raft-mediated endocytosis (39), inhibition of Gag-mediated assembly, or both. It is interesting that multiple new pathways for internalization, including dynamin-independent pathways, have been described recently (for example, see reference 25).
One of the unanswered questions in the field of virus assembly is how the location for particle production is chosen. It is well established that, in many cell types, HIV-1 Gag is primarily localized at the plasma membrane. However, recent evidence clearly implicates the MVB as a site for Gag localization and particle production in macrophages. Our data (Fig. 8) strongly suggest that Gag distribution is regulated by the intracellular distribution of cholesterol. Treatment of cells with U18666A had a striking effect on Gag localization, causing a dramatic accumulation of Gag in CD63-positive MVBs. Particle production occurred at levels equivalent to those for untreated cells. These results imply that a COS-1 cell can be induced to behave like a macrophage with respect to virus assembly by redistributing cholesterol from the plasma membrane to the MVB.
Three HIV-1 proteins have been shown to interface with the cellular endocytic machinery: Env, Nef, and Vpu. Env has a tyrosine-based internalization motif (10). In cells that express Env alone, Env internalization is rapid, whereas in HIV-1-infected cells, Env internalization is very slow. The presence of Gag is both necessary and sufficient for the inhibition of Env internalization (10). It is possible that interaction of Gag with endocytic sorting factors reduces the availability of these components for binding to other proteins, resulting in a reduced rate of Env internalization.
In conclusion, the data presented in this paper strongly suggest that HIV-1 Gag contains a dileucine-like signal that mediates the trafficking of Gag from the plasma membrane to the MVB. This signal is independent of the L domain, which has been shown to interact with endosomal proteins. The steady-state distribution of Gag in COS-1 cells is primarily at the plasma membrane, implying that either the rate of Gag endocytosis is slow or the rates of trafficking out of MVBs (recycling to the plasma membrane or entry into lysosomes) are rapid. The situation is different for macrophages, in which Gag is found in MVBs. We propose that the steady-state subcellular localization of Gag, and therefore the site of VLP formation, can be regulated by the relative distribution of cellular cholesterol in a particular cell type. Moreover, these results imply that the internalization of Gag is functionally important, as mutation of the endocytosis signal blocks the ability of Gag to target MVBs and also inhibits VLP production.
This work was supported by NIH grant CA72309. O.W.L. is a Dorris J. Hutchison Graduate Fellow.
|
|
|---|
This article has been cited by other articles:
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Copyright © 2009 by the American Society for Microbiology. For an alternate route to Journals.ASM.org, visit: http://intl-journals.asm.org | More Info»