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Journal of Virology, March 2003, p. 2866-2872, Vol. 77, No. 5
0022-538X/03/$08.00+0 DOI: 10.1128/JVI.77.5.2866-2872.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Endoproteolytic Processing of the Lymphocytic Choriomeningitis Virus Glycoprotein by the Subtilase SKI-1/S1P
Winfried R. Beyer,1* Dennis Pöpplau,1 Wolfgang Garten,2 Dorothee von Laer,3 and Oliver Lenz2
Heinrich-Pette-Institut für Experimentelle Virologie und Immunologie an der Universität Hamburg, D-20251 Hamburg,1
Institut für Virologie, Philipps Universität, 35037 Marburg,2
Georg-Speyer-Haus, 60596 Frankfurt, Germany3
Received 1 July 2002/
Accepted 24 October 2002

ABSTRACT
The envelope glycoprotein (GP) of lymphocytic choriomeningitis
virus (LCMV) is posttranslationally cleaved into two subunits.
We show here that this endoproteolytic processing is not required
for transport to the cell surface but is essential for LCMV
GP to mediate infectivity of pseudotyped retroviral vectors.
By systematic mutational analysis of the LCMV GP cleavage site,
we determined that the consensus motif R-(R/K/H)-L-(A/L/S/T/F)
265 is essential for the endoproteolytic processing. In agreement
with the identified consensus motif, we show that the cellular
subtilase SKI-1/S1P cleaves LCMV GP.

INTRODUCTION
Lymphocytic choriomeningitis virus (LCMV) is the prototype of
the
Arenaviridae family, which includes important human pathogens
causing hemorrhagic fever, such as Lassa virus, Junin virus,
Machupo virus, and Guanarito virus. LCMV has been widely used
as an experimental model for the study of immunology, viral
persistence, and viral pathogenesis (
34,
50).
Virions of LCMV are composed of a nucleocapsid which is surrounded by a lipid envelope containing the envelope glycoprotein (GP). The initial steps in LCMV infection involve the interaction of GP with the cellular receptor of the target cells. Depending on the GP sequence, LCMV uses either alpha-dystroglycan or an alternative cellular protein as a receptor (15, 41, 42). After internalization of the virions within vesicles, LCMV GP mediates fusion of the viral and cellular membranes, resulting in delivery of the nucleocapsids into the cytoplasm (9, 18, 19).
LCMV GP is initially expressed as a precursor polypeptide, GP-C, which is posttranslationally cleaved into two subunits, GP-1 and GP-2 (12). Cleavage of LCMV GP-C by a yet-unidentified cellular protease occurs in the Golgi or a post-Golgi compartment (47), whereas the related Lassa virus GP-C was found to be cleaved early in the secretory pathway by the subtilase SKI-1/S1P (4, 31). The amino-terminal cleavage product GP-1 is a peripheral membrane protein and is noncovalently associated with the carboxy-terminal subunit GP-2, which is an integral membrane protein (14). GP-1 presumably interacts with the cellular receptor, whereas the GP-2 subunit most likely mediates fusion of the viral envelope with the cellular membrane (8, 13, 26, 27). The fusion peptide of GP-2 appears to be activated to a fusion-competent state by a pH-dependent conformational change of the LCMV GP subunits (9, 18, 19).
The GP of LCMV and other arenaviruses are cleaved between two uncharged amino acids (13, 30), whereas most other viral GPs are cleaved after a basic amino acid (29). In this study, we analyzed cleavage of LCMV GP in detail. We show that cleavage of LCMV GP is not required for transport to the cell surface but is required for mediating virus infectivity of retroviral pseudotypes. Furthermore, we have determined the consensus motif for cleavage of the LCMV GP, and we show that LCMV GP is cleaved in a late-Golgi or post-Golgi compartment by the cellular subtilase SKI-1/S1P.

MATERIALS AND METHODS
Construction of LCMV GP and Lassa virus GP expression plasmids.
The GPs of LCMV strain WE (WE-HPI sequence) and Lassa virus
strain Josiah were expressed by using either the human cytomegalovirus
immediate-early promoter, the rabbit beta-globin intron B and
rabbit beta-globin polyadenylation sites of the pHCMV-vector
(
6), or the beta-actin promoter-driven pCAGGS vector (
33). LCMV
GP mutants were generated by site-directed mutagenesis with
the QuikChange site-directed mutagenesis system (Stratagene,
Amsterdam, The Netherlands). The sequences of the Lassa virus
GP and LCMV GP open reading frames were confirmed by DNA sequencing.
Cell lines, cell culture, and transfection.
The cell lines 293T, TE671, HeLa, and Vero were obtained from the American Type Culture Collection. These cell lines were grown in Dulbecco's modified Eagle medium (DMEM) with 1 mM pyruvate, 4 mM glutamine, and 10% heat-inactivated (30 min, 56°C) fetal bovine serum. 293T cells were calcium phosphate transfected as previously described (7). HeLa cells were transfected by using FuGENE6 (Roche Diagnostics GmbH, Mannheim, Germany).
CHO-K1 and SRD-12B cells were a generous gift from J. L. Goldstein (35). CHO-K1 cells were grown in DMEM nutrient mixture F12 Ham (Gibco/Invitrogen, Karlsruhe, Germany) supplemented with 10% fetal bovine serum, 100 U of penicillin per ml, and 0.1 mg of streptomycin per ml. SRD-12B cells (35) were maintained as CHO cells with the addition of 5 µg of cholesterol (Sigma) per ml, 1 mM sodium mevalonate (Sigma), and 20 µM sodium oleate (Sigma). CHO, SRD-12B, and Vero cells were transfected with Lipofectamine 2000 (Gibco/Invitrogen).
Production and titration of retrovirus pseudotypes.
Pseudotyped retrovirus vectors were generated by cotransfection of 293T cells with plasmids encoding LCMV GP, MLVgagpol, and a retroviral vector encoding the enhanced green fluorescent protein (eGFP), as previously described (7). Supernatants of the packaging cells were harvested, and vector titers were measured by end point dilution on TE671 cells or HeLa cells, as described previously (7).
Immunoblot analysis.
Cells were lysed at 65 h posttransfection in radioimmunoprecipitation assay buffer (150 mM NaCl, 1% NP-40, 0.5% deoxycholate, 0.1% sodium dodecyl sulfate [SDS], 50 mM Tris [pH 8.0]), mixed at a ratio of 1:2 in 2x protein loading buffer (1x loading buffer contains 60 mM Tris [pH 6.8], 10% glycerol, 2% SDS, 0.004% bromphenol blue, and 5% ß-mercaptoethanol), and heated for 5 min at 95°C. The protein samples were separated by SDS-10% polyacrylamide gel electrophoresis (PAGE) and transferred to nitrocellulose membranes. The membranes were blocked with Tris-buffered saline containing 2% bovine serum albumin (Sigma) and incubated with the monoclonal rat antihemagglutinin (anti-HA) tag-specific antibody 3F10 (Roche). After washing of the filters with Tris-buffered saline and incubation with horseradish peroxidase-conjugated goat anti-rat antibody (Dianova, Hamburg, Germany), the HA-tagged proteins were detected by chemiluminescence with the ECL system (Amersham-Pharmacia, Freiburg, Germany).
Pulse-chase experiments and immunoprecipitation.
Plasmid-transfected Vero cells were starved for 1 h with DMEM lacking methionine and cysteine before cells were labeled for 30 min with [35S]methionine and [35S]cysteine (100 µCi of [35S]Promix; Amersham-Pharmacia). The radioactive label was removed from the cells and replaced by DMEM, and the cells were left for 3 h. Brefeldin A (Sigma) and monensin (Sigma) were added to the cells at final concentrations of 15 µg/ml and 10 µM, respectively, in the medium during starving, labeling, and chase periods. The cells were lysed in radioimmunoprecipitation assay buffer, sonicated, and freed from insoluble material by centrifugation at 10,000 x g for 30 min, and the supernatants were incubated with a monoclonal tetra-His antibody (Qiagen, Hilden, Germany) and protein A-Sepharose. Precipitated material was subjected to SDS-PAGE and fluorography.
Flow cytometry.
For staining of LCMV GP on the cell surface, transfected cells were resuspended in phosphate-buffered saline (PBS) at 65 h posttransfection and incubated for 30 min at 4°C with monoclonal anti-LCMV GP-1-directed antibody KL25 (11). The cells were washed three times with PBS containing 2% fetal calf serum and labeled for 30 min at 4°C with goat anti-mouse antibody conjugated to allophycocyanin (Dianova). Stained cells were subsequently analyzed by flow cytometry on a FACSCalibur (Becton Dickinson, San Jose, Calif.).
Immunofluorescence.
For detection of LCMV GP by immunofluorescence, HeLa cells were grown on coverslips and fixed 2 days after transfection. For cell surface staining, cells were fixed for 15 min in PBS containing 1% paraformaldehyde and 0.02% glutaraldehyde at room temperature. For intracellular staining, cells were incubated for 15 min in PBS containing 4% paraformaldehyde at room temperature, washed with PBS, and incubated with 0,2% Triton X-100 for 5 min at room temperature.
Fixed cells were stained for 30 min at room temperature with monoclonal mouse anti-LCMV GP-1-directed antibody KL25 (11) or with monoclonal rat anti-HA tag-directed antibody 3F10 (Roche). After incubation, cells were washed three times with PBS and incubated for 20 min at room temperature with fluorescein isothiocyanate-conjugated goat anti-mouse or goat anti-rat antibodies (Dianova). Cells were washed with PBS, mounted on microscope slides, and analyzed on an Axiovert Zeiss immunofluorescence microscope.

RESULTS
Cleavage is not essential for cell surface expression of LCMV GP.
In order to determine whether endoproteolytic processing is
a prerequisite for cell surface expression, we generated LCMV
GP expression plasmids encoding GPs with mutations near the
cleavage site. These constructs were transfected into 293T or
HeLa cells, and cleavage of the C-terminal HA-tagged GPs was
analyzed by Western blotting with an anti-HA tag-specific antibody.
A loss of GP cleavage was observed when the arginine at amino
acid 262 or 263 (positions P4 and P3) was replaced by an alanine
(Fig.
1). Additionally, the mutation encoding an alanine instead
of a leucine at amino acid 264 (position P2) impaired cleavage
of the LCMV GP precursor GP-C (Fig.
1).
The uncleaved LCMV GP mutants were efficiently transported to
the cell surface as shown by immunofluorescence and flow cytometry
with the monoclonal anti-LCMV GP-1-directed antibody KL25 (Fig.
2) and other monoclonal GP-1-specific antibodies (data not shown).
Indeed, uncleaved mutants resulted in slightly stronger cell
surface staining of transfected cells than did wild-type, cleaved
LCMV GP (Fig.
3). Furthermore, analysis of intracellular LCMV
GP by immunofluorescence with an anti-HA tag-specific antibody,
showed no difference in the cellular distribution of cleaved
and uncleaved LCMV GP mutants (data not shown).
Proteolytic processing is a prerequisite for infectivity of retroviral pseudotypes with LCMV GP.
In order to determine whether uncleaved LCMV GPs can mediate
virus infectivity, we generated retroviral vectors pseudotyped
with either the cleaved wild-type LCMV GP or the uncleaved LCMV
GP mutants. Therefore, we cotransfected 293T cells as previously
described with plasmids encoding MLVgagpol, a retroviral vector
encoding eGFP, and a vector coding for wild-type or mutant LCMV
GP (
7). Infectivity of the pseudotypes could be measured directly
by gene transfer of the eGFP marker gene, encoded on the retroviral
vector. More than 10
5 eGFP transfer units per ml could be measured
in the supernatant of retroviral packaging cells expressing
wild-type LCMV GP. In contrast, no eGFP gene transfer could
be detected when the packaging cells expressed any of the uncleaved
LCMV GP mutants (Fig.
3). This indicates that cleavage is a
prerequisite for LCMV GP to mediate infectivity of the pseudotypes.
Consensus sequence at the cleavage site of LCMV GP-C.
To determine the sequence requirements at the cleavage site of LCMV GP-C in detail, we analyzed various GP mutants with single amino acid substitutions. In an alanine-scanning experiment, we introduced single alanine mutations between amino acids 258 and 268. The generated mutants and the corresponding GP characteristics are summarized in Table 1. All mutants were efficiently expressed on the cell surface. However, only the R262A, R263A, and L264A mutants were not cleaved. Reduced cleavage was observed for the F259A, L260A, and T261A mutants, whereas the K258A, G266A, T267A, and F268A mutants were efficiently cleaved.
To further determine the consensus sequence of the LCMV GP-C
cleavage site, we analyzed additional amino acid substitutions
at the most critical sites (Table
1). Replacement of the arginine
at amino acid 262 with the basic amino acid lysine impeded GP
cleavage, whereas this mutation at amino acid 263 allowed efficient
cleavage. However, a histidine or, more severely, a serine or
asparagine at amino acid 263 impaired the cleavage efficiency
of LCMV GP-C. Less permissive was amino acid 264, because exchange
of the leucine to the closely related amino acids isoleucine
or valine strongly affected GP cleavage, as does exchange to
the also hydrophobic amino acid phenylalanine.
We also introduced various amino acid substitutions of the amino acid alanine at position 265, which is located directly N terminal to the LCMV GP-C cleavage site (13) (Table 1). A leucine, serine, threonine, or phenylalanine at this amino acid position allowed efficient cleavage. However, isoleucine, valine, or glutamic acid at this position strongly impeded GP cleavage. Together, these results show that the complex consensus sequence R-(R/K/H)-L-(A/L/S/T/F)265 is responsible for cleavage of LCMV GP-C.
LCMV GP-C is cleaved by the subtilase SKI-1/S1P.
The requirements of the basic amino acid arginine at position P4, leucine at position P2, and nonbasic amino acids like alanine, leucine, or threonine at position P1 correlate well with known substrates and recognition sequences of the cellular subtilase SKI-1/S1P (38, 40). Therefore, we analyzed the role of SKI-1/S1P in the cleavage of LCMV GP-C. The SKI-1/S1P-deficient cell line SRD-12B (35) and its parental cell line CHO-K1 were transfected with expression plasmids encoding LCMV GP. No cleavage product was detected in the protease-negative cells, whereas the parental CHO cells efficiently cleaved LCMV GP. Furthermore, cotransfection of the protease-negative SRD-12B cells with LCMV GP and SKI-1/S1P expression plasmids restored GP cleavage (Fig. 4). Our data clearly show that SKI-1/S1P is responsible for endoproteolytic processing of LCMV GP-C.
LCMV GP-C is cleaved late in the secretory pathway.
By using pulse-chase experiments with a temperature block, it
has been observed that LCMV GP-C is cleaved in a Golgi or post-Golgi
compartment (
47). In contrast, by using a brefeldin A block,
it was recently shown that Lassa virus GP-C is cleaved early
in the secretory pathway (
31). Brefeldin A is known to disassemble
the
cis- and medial-Golgi and to inhibit anterograde transport
of secretory proteins. Since we have shown here that LCMV GP-C
is cleaved by SKI-1/S1P, the same protease processing Lassa
virus GP-C, we compared directly the effects of brefeldin A
on the cleavage of LCMV and Lassa virus GPs.
Vero cells were transfected with empty vector or plasmids encoding a His6-tagged LCMV or Lassa virus GP. After pulse-chase and treatment with brefeldin A or monensin, the proteins were immunoprecipitated and analyzed by SDS-PAGE. As reported before, treatment of Lassa virus GP-C-expressing cells with brefeldin A had no effect on the cleavage of Lassa virus GP-C (Fig. 5, lane 3). In contrast, cleavage of LCMV GP-C was impaired by the addition of brefeldin A (Fig. 5, lane 6). The addition of monensin, an ionophore, blocking the transport from the Golgi to the late Golgi compartment, also inhibited the cleavage of LCMV GP-C (Fig. 5, lane 7). Our data clearly indicate that SKI-1/S1P cleaves GP-C of LCMV in a late Golgi or post-Golgi compartment, whereas Lassa virus GP-C is cleaved by the same protease in a compartment early in the secretory pathway.

DISCUSSION
It was previously reported that both cleavage and cell surface
expression of LCMV GP are impaired in parallel when LCMV GP
is not N glycosylated or when it contains a proline at amino
acid 110 (
6,
47). However, these impairments may be due to protein
folding problems in the endoplasmic reticulum targeting the
misfolded LCMV GP to the protein degradation pathway (
22). In
this study, we have generated uncleaved LCMV GP mutants with
mutations next to the cleavage site. All of these mutants were
efficiently transported to the cell surface, showing that cleavage
is not a requirement for cell surface expression of LCMV GP.
Furthermore, uncleaved GPs did not show altered cellular distribution
and could be detected with various conformation-dependent antibodies.
Thus, endoproteolytic processing of LCMV GP is most likely not
important for correct folding and cellular transport of the
GP.
We also used cleaved and uncleaved GP mutants to generate retrovirus vector pseudotypes. High vector titers were obtained by using proteolytically processed LCMV GP, but uncleaved mutants did not mediate infectivity of retroviral vectors. Analysis of the supernatants of the packaging cells showed that uncleaved LCMV GP is present in preparations of retroviral particles (data not shown). Thus, uncleaved LCMV GP is most likely correctly incorporated into the assembling particles. We are currently analyzing the different steps involved in LCMV GP-mediated infectivity in wild-type virus and retroviral pseudotypes. For many viral envelope GPs from the retroviruses, othomyxoviruses, and paramyxoviruses, cleavage was found to be a prerequisite for the GP to mediate membrane fusion (28). Thus, uncleaved LCMV GP may also be impaired in mediating fusion of the viral and plasma membranes.
By systematic mutational analysis of the LCMV GP-C cleavage site, we determined that the consensus motif R-(R/K/H)-L-(A/L/S/T/F)265 is essential for GP-C cleavage, which has been described to occur between alanine 265 and glycine 266 (13). Thus, the LCMV GP-C cleavage site is located between uncharged amino acids and needs the basic amino acid arginine at position P4 and a leucine at position P2. This motif is very similar to the recognition sites of the mammalian subtilase SKI-1/S1P. This protease has been cloned as the site 1 protease (S1P) of the sterol regulatory element-binding proteins (SREBPs) (38), being involved in the cholesterol regulation pathway (17, 20, 37, 48). It also was independently cloned as a mammalian subtilisin-kexin isoenzyme (SKI-1), cleaving the brain-derived neurotrophic factor precursor (proBDNF) (40), and by sequencing of random cDNAs from a human myeloid cell library (32). In addition to SREBPs (16, 38) and proBDNF (40, 45), SKI-1/S1P also cleaves the membrane bound transcription factor ATF6 (49), the Lassa virus GP (4, 31), and the prodomain of SKI-1/S1P itself (16, 23, 45). Analysis of the cleavage sites of the identified substrates showed that SKI-1/S1P can mediate cleavage after uncharged amino acids such as leucine or threonine. Furthermore, the identified substrates always contain an arginine at position P4 and usually contain a leucine at position P2. These similarities between the determined consensus sequence of LCMV GP-C and the recognition motif of SKI-1/S1P, as well as the identification of SKI-1/S1P as the protease cleaving the homologues Lassa virus GP (30, 31), led us to analyze cleavage of LCMV GP-C by SKI-1/S1P.
Analysis of SKI-1/S1P-dependent cleavage of LCMV GP-C was facilitated by the cell line SRD-12B, which is deficient in the SKI-1/S1P protease (35). In these cells LCMV GP-C was not cleaved, whereas GP cleavage was found in the parental cell line or in the deficient cells after transfection of an SKI-1/S1P expression plasmid, thus showing that the viral GPs of LCMV and Lassa virus are cleaved by the same cellular protease.
Treatment of Lassa virus and LCMV GP-expressing cells with brefeldin A and monensin confirmed previous findings that while Lassa virus GP-C is cleaved by SKI-1/S1P early in the secretory pathway, LCMV GP-C is proteolytically processed in a late Golgi or post-Golgi compartment. Thus, LCMV GP-C is in contrast to Lassa virus GP-C, and the known cellular substrates SREBP, ATF6, and proBDNF are cleaved after leaving the cis/medial Golgi. SKI-1/S1P is activated by autocatalytic cleavage of the prodomain early in the secretory pathway before an active form of SKI-1/S1P is transported to the Golgi complex, and after further proteolysis, the ectodomain is secreted as an active protease in the extracellular space (21). The subcellular localization of cleavage may also be determined by particular substrates, as shown for furin, an SKI-1/S1P-related subtilase (5). Additionally, in vitro cleavage studies with SKI-1/S1P showed that the pH optimum of the proteolysis differs from substrate to substrate (45). Furthermore, we observed strongly reduced cleavage of LCMV GP-C after treatment with the lysosomotropic agent chloroquine, whereas this agent had no effect on the proteolytic processing of Lassa virus GP-C (data not shown). This indicates that SKI-1/S1P can cleave its substrates along the secretory pathway when the cellular conditions, such as pH, are favorable for the specific substrate.
LCMV and Lassa virus GP-C are cleaved by the same protease, SKI-1/S1P, although proteolytic processing of the GPs occurs in different subcellular compartments and the GPs contain different cleavage motifs. LCMV and Lassa virus GPs both share arginine at position P4, which is highly conserved among the arenaviruses (Fig. 6). This raises the possibility that all arenavirus GPs are cleaved by SKI-1/S1P or a closely related protease, although they show various amino acid substitutions within the cleavage motif.
In summary, we have shown that cleavage of the LCMV GP is not
a prerequisite for cell surface expression but is required for
LCMV GP to mediate infectivity of retroviral pseudotypes. The
determined sequence required for cleavage of LCMV GP-C varies
from that of Lassa virus GP-C, and the two arenavirus GPs are
cleaved in different compartments of the secretory pathway.
However, the GPs of LCMV and Lassa virus both are cleaved by
the subtilase SKI-1/S1P.

ACKNOWLEDGMENTS
We thank H.-D. Klenk, J. ter Meulen, and W. Ostertag for helpful
discussion and support, B. Abel for excellent technical assistance,
and C. Stocking for critical reading of the manuscript. We are
grateful to J. L. Goldstein and N. G. Seidah for kindly providing
SRD-12B cells and pcDNA3.1-SKI-1/S1P plasmid, respectively.
This work was supported by the Deutsche Forschungsgemeinschaft (grants LA 1135/3-1 and GA 282/4-1), the Bundesministerium für Bildung und Forschung, and CellTec Biotechnologie GmbH (grant 00312173).

FOOTNOTES
* Corresponding author. Mailing address: Heinrich-Pette-Institut, Martinistr. 52, D-20251 Hamburg, Germany. Phone: 49 40-8051-270. Fax: 49 40-48051-187. E-mail:
beyer{at}hpi.uni-hamburg.de.


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Journal of Virology, March 2003, p. 2866-2872, Vol. 77, No. 5
0022-538X/03/$08.00+0 DOI: 10.1128/JVI.77.5.2866-2872.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
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