Previous Article | Next Article ![]()
Journal of Virology, February 2003, p. 2410-2417, Vol. 77, No. 4
0022-538X/03/$08.00+0 DOI: 10.1128/JVI.77.4.2410-2417.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Division of Virology, Department of Pathology, University of Cambridge, Cambridge, United Kingdom
Received 18 July 2002/ Accepted 12 November 2002
|
|
|---|
|
|
|---|
Herpesviruses usually infect cells that are not cycling, and therefore they must cope with an intracellular milieu deficient in deoxyribonucleotides. Since dTTP cannot be derived from intracellular ribonucleotide pools by ribonucleotide reductase, its supply presents a special problem. Cellular dTMP either is synthesized de novo, culminating in dUMP methylation by thymidylate synthase, or is salvaged from dT by thymidine kinase (TK). In most cell types the salvage pathway predominates, and TK is the rate-limiting enzyme in dTMP supply. The major (nonmitochondrial) cellular TK turns over rapidly and is induced only at the time of DNA synthesis (7). Cellular thymidylate synthase activity is similarly regulated. The supply of dTMP is thus limited to the S phase of the cell cycle. To compensate for the lack of dTMP in infected cells, all herpesviruses increase intracellular TK activity and most encode a TK homolog. The sequence conservation of the genes encoding herpesvirus TKs is fairly low, and none is closely related to the cellular genethey may originate instead from the cellular deoxycytidine kinase (17). The herpes simplex virus (HSV) TK has been studied most intensively, and its relatively broad specificity for nucleoside analogues has made it the archetype for succesful antiviral chemotherapy. Since TK-deficient viral mutants are not uncommon, the basis for this approach has been the failure of these mutants to replicate in neurons (9, 12, 13). TK-deficient HSV also shows reduced replication in epithelial sites (9).
While the alpha- and betaherpesviruses cause disease by lytic replication, the human gammaherpesviruses cause disease chiefly when latent. However, two factors have focused attention on gammaherpesvirus TKs. First, the presence of replicating KSHV in tumors associated with this virus suggests that lytic cycle viral genes contribute to disease progression (19) and are thus potential therapeutic targets; and second, the induction and simultaneous inhibition of lytic cycle EBV replication is being developed as a strategy to clear latent genomes (11). How the gammaherpesvirus TKs function is not entirely clear. They have in common a large N-terminal extension, not present in the HSV TK, which, with EBV at least, is not required for TK activity (20). Also, the KSHV TK has, outside the context of viral infection, a suprisingly high Km for thymidine (16). Its activity may be higher, or even qualitatively different, in virus-infected cells. Interestingly, the pathogenicity of herpesvirus saimiri, another gammaherpesvirus, is increased by expression of the HSV TK (18).
The MHV-68 TK gene has early and late kinetics and encodes a protein with TK activity in vitro (24). The MHV-68 TK has already been exploited in antiviral chemotherapy: treating mice with nucleoside analogues (3, 23, 33) inhibits lytic MHV-68 replication but does not prevent the establishment of a latency. However, the TK status of the viruses establishing latency was not determined. Consequently, it is not clear whether the limited capacity of antiviral chemotherapy to control host colonization reflected a limited potency and delivery of the nucleoside analogs tested or reflected the capacity of naturally occurring TK mutants to replicate in vivo. Since viral TK mutants are likely to arise on a regular basis, a knowledge of the importance of TK in pathogenesis should help to define the theoretical limit of efficacy of TK-based antiviral chemotherapy. In addition, the basic biological role of TK in gammaherpesvirus infections is unknown. To address these questions, we have generated and characterized TK-deficient MHV-68 mutants.
|
|
|---|
Cell lines. Baby hamster kidney (BHK-21) cells (American Type Culture Collection, CCL-10), a TK-deficient derivative (European Collection of Animal Cell Cultures, catalogue number 85011423), and murine embryonic fibroblasts harvested at 13 to 14 days of gestation were all grown in Dulbecco modified Eagle medium (Invitrogen, Paisley, United Kingdom) supplemented with 2 mM glutamine, 100 U of penicillin per ml, 100 µg of streptomycin per ml, and 10% fetal calf serum (PAA Laboratories, Linz, Austria) (complete medium). The phenotype of TK- and TK+ BHK-21 cells was confirmed by selection in medium supplemented with 50 µg of 5-bromo-2-deoxyuridine per ml and 100 µM hypoxanthine-0.4 µM aminopterin-16 µM thymidine medium, respectively, prior to use. To make NIH 3T3 CRE cells, the cre gene of bacteriophage P1 was cloned into the EcoRI-XhoI sites of pMSCV-NEO (28) and cre-expressing retrovirus was generated by transient transfection of Phoenix-Eco cells (www.stanford.edu/group/nolan) with pMSCV-CRE-NEO. NIH 3T3 cells (American Type Culture Collection, CRL-1658) were transduced with retrovirus in the presence of 6 µg of polybrene per ml and selected in 1 mg of G418 per ml.
Virus titers. Lungs were homogenized in complete medium, frozen, thawed, and sonicated. Tissue debris was pelleted by brief centrifugation (1,000 x g for 1 min). Infectious virus in homogenate supernatants was measured by a plaque assay of 10-fold dilutions of lung homogenates on TK+ BHK-21 cells as previously described (31). After 5 days, monolayers were fixed in 10% formaldehyde and stained with 0.1% toluidine blue and plaques were counted under a plate microscope. Latent virus was measured by explant culture of single-cell suspensions of spleens on murine embryonic fibroblast monolayers, which were fixed and stained after 6 days.
Viral mutagenesis. A kanamycin resistance gene flanked by Flp recombinase target (FRT) sites was amplified from BsaI-linearized pCP15 (1) by PCR (Expand Hi Fidelity; Roche, Lewes, United Kingdom), using primers with 50-bp 5' extensions corresponding to nucleotides 33251 to 33300 and 33451 to 33500 of the MHV-68 genome (37). The purified PCR product was electroporated into the SbcA RecBC Escherichia coli strain JC8679 containing the MHV-68 bacterial artificial chromosome (BAC). This allowed incorporation of the kanamycin resistance gene into the MHV-68 BAC TK locus by RecE/T-mediated recombination (1). BAC DNA (TK- Kan+) was isolated from chloramphenicol- and kanamycin-resistant colonies and transformed into E. coli DH10B. The integrity of the BAC and correct incorporation of the kanamycin resistance gene were confirmed by restriction enzyme mapping. E. coli DH10B containing the TK- Kan+ BAC were then transformed with a temperature-sensitive Flp recombinase expression plasmid, pCP20, as previously described (1). This resulted in excision of the kanamycin resistance gene, leaving a 167-bp insert in the TK locus, comprising a single FRT site and short flanking plasmid sequences, in place of 150 bp of viral genome (TK- Kan-). The bacteria were cured of pCP20 by growth at the nonpermissive temperature (43°C). Successful Flp recombination was established by replica plating of bacteria onto chloramphenicol or chloramphenicol plus kanamycin and confirmed by restriction enzyme mapping of BAC DNA. To make a revertant virus (TK+ R), a BamHI-SacI unmutated MHV-68 genomic fragment (genomic coordinates 29616 to 35045) was ligated into the RecA+ SacB+ temperature-sensitive shuttle vector pST76K-SR (1) and transformed into E. coli DH10B containing the TK- Kan- BAC. Cointegrants were selected by growth in chloramphenicol plus kanamycin at 43°C. Cointegrant resolution was selected by growth in chloramphenicol-5% sucrose at 30°C; under these conditions, the induced expression of SacB is lethal to E. coli. Colonies were then screened by restriction enzyme digestion for resolution to a wild-type (WT) genomic pattern. An independent TK-deficient mutant was also made by the pST76K-SR shuttle method. An EcoRI-restricted MHV-68 genomic fragment (genomic coordinates 30798 to 38212) was cloned into pUC8. The central portion (33293 to 34300) of the TK open reading frame (ORF) (32879 to 34813) was excised by digestion with AvrII and PmeI, blunting with T4 DNA polymerase (New England Biolabs, Hitchin, United Kingdom), and religation with T4 DNA ligase (New England Biolabs). This modified genomic fragment was then excised with EcoRI, blunted with T4 DNA polymerase, and subcloned into SmaI-cut pST76K-SR. This plasmid was transformed into E. coli DH10B containing the WT MHV-68 BAC. RecA-mediated plasmid integration into the BAC and cointegrant resolution proceeded as described above, except that colonies were screened for retention of the mutant TK locus in the BAC rather than for the WT pattern. Each BAC was reconstituted into MHV-68 virus by transfecting 10 µg of BAC DNA into NIH 3T3 cells by the calcium phosphate method (Invitrogen). The loxP-flanked BAC-green fluorescent protein cassette was then removed by the passage of virus through NIH 3T3- CRE cells until green fluorescent protein-positive cells were no longer visible.
TK assay. TK- BHK-21 cells were infected with MHV-68 (5 PFU per cell). After 20 h, the cells were harvested, washed with ice-cold phosphate-buffered saline (PBS), pelleted, resuspended in 50 mM NaCl, and sonicated for 45 s on ice. Cell debris was removed by ultracentrifugation at 25,000 x g for 30 min at 4°C. Supernatants were stored at -70°C. To assay thymidine phosphorylation, supernatants were incubated at 37°C for 20 min in 0.1 M phosphate buffer (pH 6.4)-4.8 mM MgCl2-4.8 mM ATP-11 µM [14C]thymidine (58 Ci/mol; Amersham Biosciences, Little Chalfont, United Kingdom). Samples were then boiled for 2 min, spotted in duplicate onto DEAE paper, and allowed to dry. Free thymidine was removed by washing three times for 1 h each in 5 mM ammonium formate. Bound phosphorylated thymidine was quantified by scintillation counting.
Flow cytometry. Spleens were disrupted into single-cell suspensions, washed in PBS-0.1% bovine serum albumin (BSA)-0.01% azide, and incubated for 30 min on ice with 5% mouse serum, 5% rat serum, and anti-CD16/32 monoclonal antibody (BD-Pharmingen, San Diego, Calif.). Specific staining was done with phycoerythrin-conjugated anti-CD8 and fluorescein isothiocyanate-coupled anti-Vß4 (BD-Pharmingen). After a 1-h incubation on ice, cells were washed twice in PBS-0.1% BSA-0.01% azide and analyzed on a FACSCalibur instrument using Cellquest software (Becton-Dickinson, Oxford, United Kingdom). Data were analyzed with FCSPress v1.3.
ELISA. Maxisorp enzyme-linked immunosorbent assay (ELISA) plates (Nalge Nunc, Rochester, N.Y.) were coated overnight with goat anti-mouse immunoglobulin G (IgG) for total IgG measurements and with 0.05% Triton X-100-disrupted MHV-68 virions for virus-specific IgG as previously described (26). The plates were washed three times with PBS-0.1% Tween 20, blocked with PBS-0.1% Tween 20-1% BSA, and incubated with threefold serum dilutions for 1 h at room temperature. They were then washed four times, incubated with alkaline phosphatase-conjugated goat anti-mouse IgG, washed five times, and developed with nitrophenyl phosphate substrate (Sigma Chemical Co., Poole, United Kingdom). The reaction was terminated with an excess of NaOH, and the absorbance was read at 405 nm.
Analysis of viral transcripts. RNA was extracted from MHV-68-infected cells using RNAzolB (Tel-Test, Friendswood, Tex.), and contaminating DNA was removed with RNase-free DNase (Promega UK, Southampton, United Kingdom). cDNA was synthesized using avian myeloblastosis virus reverse transcriptase (RT) (Promega) and amplified with Taq polymerase (Amersham Biosciences) and primers specific for the MHV-68 ORF20 (genomic coordinates 32117 to 32871), ORF22 (34883 to 35396), and M3 (6061 to 7278). The PCR products were analyzed over a range of cycle numbers to ensure a more quantitative comparison of transcript levels.
|
|
|---|
![]() View larger version (80K): [in a new window] |
FIG. 1. Genomic structure of TK+ and TK- viruses. (A) The TK- Kan+ virus was generated by inserting a FRT-flanked kanamycin resistance gene at genomic coordinates 33301 to 33450. The kanamycin resistance coding sequence was removed by Flp recombination to leave an inset of 167 bp (TK- Kan-). This virus was reverted by homologous recombination with an unmutated genomic segment (TK+ R). An independent mutant (TK- Del) was generated by RecA-mediated recombination of BAC DNA with a genomic plasmid clone in which genomic coordinates 33293 to 34300 are deleted by digestion with AvrII and PmeI. (B) Viral DNA was digested with XbaI, EcoRI, or SacI, electrophoresed, blotted, and probed with a32P-labeled genomic EcoRI fragment spanning the TK locus.
|
Characterization of MHV-68 TK mutants in vitro. TK assays (Fig. 2) were used to confirm that mutagenesis had disrupted the viral TK gene and that reversion had successfully restored it. The MHV-68 TK is expressed at early times (24) and is presumably most necessary prior to viral DNA replication. Therefore, we wished to check particularly whether there was TK activity in cells at early times after infection with the TK mutants. To do this, TK- BHK cells were infected with TK+ and TK- viruses (5 PFU/cell) in either the presence or absence of phosphonoacetic acid, which inhibits viral DNA replication and thus limits gene expression to the early lytic cycle. Cultures were harvested after 18 h and assayed for TK activity. No activity was seen in cells infected with the TK mutants, either early or late in lytic cycle replication, whereas activity was fully restored in the revertant virus.
![]() View larger version (20K): [in a new window] |
FIG. 2. TK activity of TK+ and TK- viruses. TK- BHK-21 cells were infected overnight with MHV-68 (5 PFU/cell) either in the absence of inhibitors (A) or with 100 µg of phosphonoacetic acid per ml (B), to inhibit progression to late viral gene expression. dT phosphorylation was assayed by the addition of [14C]thymidine to cell lysates followed by binding to DEAE paper, washing, and scintillation counting. "background" represents counts with substrate but no cell lysate. Means and standard deviations for triplicate assays are shown. Similar results were obtained in two further experiments.
|
![]() View larger version (23K): [in a new window] |
FIG. 3. Growth of TK+ and TK- viruses in vitro. TK- BHK-21 cells (A) or passage 9 MEFs (B) were infected with MHV-68 (0.01 PFU/cell). Cultures were subjected to titer determination for infectious virus by plaque assay on TK+ BHK-21 cells.
|
![]() View larger version (19K): [in a new window] |
FIG. 4. Growth of TK+ and TK- viruses in vivo. BALB/c (A and B) or C57BL/6 (C) mice were infected intranasally with 2 x 104 PFU of MHV-68. (A and C) Infectious virus in lung homogenates was subjected to titer determination by a plaque assay on TK+ BHK-21 cells. (B) Latent virus in spleens was subjected to titer determination by infectious center assay on passage 4-5 MEFs. In panels A and B, BAC WT virus ( ) was compared with TK- Kan+ (). In panel C, all five viruses were compared. Means and standard errors of the mean (n = 6) are shown.
|
To compare ORF20 and ORF22 transcripts with the TK+ and TK- viruses, cDNA was generated from BHK-21 cells infected overnight with each mutant (5 PFU/cell) and amplified by PCR with ORF-specific primers. The reaction products were analyzed over a range of 24 to 30 cycles. This semiquantitative RT-PCR analysis showed no evidence of an effect of TK mutagenesis on the transcription of either ORF20 or ORF22 (Fig. 5).
![]() View larger version (53K): [in a new window] |
FIG. 5. Viral transcription in TK+ and TK- viruses. TK+ BHK-21 cells were infected with MHV-68 (5 PFU/cell), and 18 h later RNA was extracted, reverse transcribed, and assayed for viral transcripts by RT-PCR amplification of part of each gene. Ethidium bromide-stained electrophoresed PCR products are shown. ORF20 and ORF22 (encoding glycoprotein H) flank the TK gene of MHV-68. M3 is a control early-late viral gene located >25 kb from the TK locus. (A) The specificity of each PCR amplification was confirmed by 30 cycles of amplification using BAC DNA (lane +) and cDNA from uninfected cells (lane -). Lanes 1 to 5 are RT- controls to exclude the presence of residual viral DNA, and lanes 6 to 10 are RT+ cDNA samples from cells infected with BAC WT (lanes 1 and 6), TK+ R (lanes 2 and 7), TK- Kan+ (lanes 3 and 8), TK- Kan- (lanes 4 and 9), and TK- Del (lanes 5 and 10) viruses. (B) To gain a more quantitative idea of ORF20 and ORF22 transcription, the same samples were amplified over a limiting number of cycles (24 to 30 cycles, as indicated).
|
![]() View larger version (17K): [in a new window] |
FIG. 6. Latency establishment and immune activation by TK+ and TK- viruses. C57BL/6 mice were infected intranasally with 2 x 104 PFU of MHV-68, and spleens and serum were harvested 1 month later. (A) Infectious-center assay for latent virus. Mean and standard error of the mean (n = 5) are shown. (B to D) Each point represents one mouse. (B) Virus-driven expansion of the splenic CD8+ Vß4+ T-cell subset. "naive" represents age-matched, uninfected controls. (C) ELISA of total serum IgG, reflecting virus-driven B-cell activation. Units are arbitary, with naive serum being set at 100 (dashed line). (D) ELISA of virion-specific serum IgG. Units are arbitary, with naive serum being set at 1.
|
|
|
|---|
TK-deficient HSV was initially thought to have an in vitro growth deficit; only later was this attributed to a deletion of the overlapping UL24 gene (9). Clearly there is potential for confusion when mutating this tightly packed region of the herpesvirus genome. To allow for this, we generated three mutants, using sites well away from the neighboring ORFs. The mutants had similar phenotypes involving a severe in vivo lytic replication deficit with a relative preservation of latency establishment. None showed decreased transcription of ORF20 (the MHV-68 homolog of UL24) or of ORF22 (which encodes glycoprotein H). Furthermore, there was no evidence of a replication deficit in BHK-21 cells, as would be expected with a disruption of either flanking gene.
TK-deficient MHV-68 showed a more severe epithelial replication deficit in vivo than did TK-deficient HSV (9). This may reflect a difference in tropism or a difference in experimental conditions. Epithelial surfaces encompass a wide range of cell phenotypes, which differ in their progress through the cell cycle, most obviously from replicating basal cells to terminally differentiated superficial cells. Experimental HSV inoculation typically involves skin scarification or subcutaneous injection, both of which expose basal epithelial cells and, by causing injury, stimulate cell division. After intranasal inoculation, MHV-68 encounters only the most superficial and thus the most fully differentiated cells of the intact epithelium. These cells have generally exited from the cell cycle and presumably contain little dTMP. TK is thus likely to be of particular importance in the first cycles of virus replication. The almost complete absence of lytic replication of TK- viruses in the lungs indicated that the availability of dTMP limits MHV-68 replication in vivo and that other viral functions, such as an induction of cellular enzymes, cannot compensate for a lack of TK.
In contrast to HSV, which cannot reactivate from latency in the absence of TK, there was no obvious deficit in MHV-68 reactivation. Latency titers showed less TK-associated deficit than did lytic titers, and TK- viruses reached WT latency levels by 1 month after infection. This presumably reflects differences in cell tropism between alpha- and gammaherpesviruses: while HSV is latent in terminally differentiated neurons, MHV-68 is latent in B cells, macrophages, and dendritic cells (14, 32, 38), all of which can proliferate in vivo. After intranasal MHV-68 infection of immunocompetent mice, B cells constitute the major reservoir of recoverable latent virus (32). The amplification of MHV-68 in germinal-center B cells (5) suggests that, as with EBV (2), latent MHV-68 resides in the memory B-cell pool. However, murine memory B cells normally proliferate at a low rate (15) and so should rarely contain significant amounts of dTMP. It may be that MHV-68 induced latently infected B cells to enter the S phase during viral reactivation, at least under the conditions of the infectious assay, such that a TK deficit was not important.
The capacity of TK-deficient viruses to drive latency amplification, with its attendant infectious mononucleosis-like illness, implied that this process is independent of lytic replication. This is consistent with data showing an independence of lytic and latent virus amplification with drug treatment (3), CD8+ T-cell vaccination (21, 27), and antibody-mediated protection (30). CD8+ T-cell vaccination with a latency epitope has also so far proved ineffective in preventing the establishment of latency (35), perhaps reflecting the action of viral evasion genes such M3 and K3 (4, 6, 29, 36). It seems that successful antiviral therapy must tackle both lytic and latent replication in order to be effective in reducing host colonization.
Thanks are due also to Stacey Efstathiou for critical review of the manuscript and to Janet May and Belinda Smillie for technical help.
|
|
|---|
-herpesvirus. Nat. Immunol. 3:733-740.[Medline]
This article has been cited by other articles:
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Copyright © 2009 by the American Society for Microbiology. For an alternate route to Journals.ASM.org, visit: http://intl-journals.asm.org | More Info»