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Journal of Virology, April 2002, p. 3502-3510, Vol. 76, No. 7
0022-538X/02/$04.00+0 DOI: 10.1128/JVI.76.7.3502-3510.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Department of Infection and Host Defense, Graduate School of Medicine, Chiba University, Inohana, Chuo-ku, Chiba, Japan,1 The Wistar Institute,2 MCP Hahnemann University, Philadelphia, Pennsylvania3
Received 9 July 2001/ Accepted 5 December 2001
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It is also clear that there are strain differences in the mouse for susceptibility to herpes keratitis (13, 32, 34, 41). Genes from the murine major histocompatibility locus (H-2) as well as non-H-2 genes were found to be involved in immune responsiveness to this infection, which relates directly to susceptibility. Genetic studies using congenics have identified a keratitis-modifying locus on chromosome 12 of the mouse that is close to or identical with the immunoglobulin heavy chain (Igh) locus (13). This finding led to studies of the potential role of idiotypic Igh determinants in initiating and/or maintaining a state of self-tolerance (2). Such determinants have been shown to be cross-reactive with HSV determinants as well (50; K. Norose and E. Heber-Katz, unpublished data). However, the roles of other genes in resistance or susceptibility to HSK is unknown. Such genes might control the initial effectiveness of the immune response to the virus or the subsequent pathogenic autoreactivity unrelated to the Igh idiotype. These questions can be addressed by mapping genes that modify the severity and incidence of HSK in susceptible and resistant inbred mice and their progeny. This approach has been employed to understand the genetic basis underlying other autoimmune diseases (6, 16, 22, 28, 29, 49), but genes that control the autoimmune outcome of infectious agents are less well characterized (4, 8, 30, 37, 42).
In the present study, we carried out a genome-wide screen using the DNA-based mapping reagents or microsatellite markers (simple sequence length polymorphism [SSLP]) on chromosomes 1 through 19 of two parental mouse strains, 129/SVEV and C57BL/6, with the same major histocompatibility complex (MHC) haplotype (H-2b). Using markers that exhibited polymorphism, we analyzed the F2 progeny derived from matings of these two strains. Keratitis was measured by both clinical and histopathological parameters, and each was used independently as a quantitative trait phenotype for analysis with respect to the inheritance of microsatellite markers. As the first step in mapping the genes, we found multiple quantitative trait loci (QTL) that are involved in the clinical symptoms of keratitis susceptibility in addition to the previously identified locus on chromosome 12. We found multiple loci involved in ocular histopathology as well, which also included the QTL on chromosome 12. Like the QTL on chromosome 12, some of the loci were shared between these phenotypes, whereas some of the loci were unique to either clinical symptoms or histopathology. We also report the influence of sex on both the severity and incidence of HSK and the use of different genes in males and females for the particular phenotypes.
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Infection. HSV type 1 (HSV-1) strain KOS (kindly provided by Nigel Fraser, University of Pennsylvania, Philadelphia) at a concentration of 2 x 108 PFU/ml was used to infect the mice. The cornea of the right eye was scarified, and each mouse received 5 µl or 106 PFU. The left eye was untreated.
Histology. For preparation of specimens for histology, mice were sacrificed on day 14 after infection and the eyes were enucleated, fixed in buffered 10% formalin, embedded in paraffin, cut in 5-µm-thick sections, and stained with hematoxylin and eosin.
Enzyme-linked immunosorbent assay (ELISA). HSV-1 (KOS) (104 PFU/50 µl/well) was added to 96-well PRO-BIND assay plates (Falcon 3915; BD and Co., Lincoln Park, N.J.) overnight at room temperature. The wells were washed three times, coated with 100 µl of a solution of 1% bovine serum albumin in phosphate-buffered saline for 2 h, washed three times, and then incubated with 50 µl of serum. The serum was used at final dilutions of 1:200, 1:1,000, and 1:5,000. Sera from uninfected C57BL/6 mice were used as a negative control, and the monoclonal HSV glycoprotein D-specific antibody B35 was used as a positive control. After 2 h, the plates were washed three times, alkaline phosphatase-coupled goat anti-mouse immunoglobulin (catalog no. A3562; Sigma) was added at a concentration of 1:10,000 for 1 h, and the plates were washed four times. The substrate p-nitrophenylphosphate was then added, and the plates were developed. The plates were then read at 650 and 405 nm using an SLT Rainbow SPECTRA 96-well plate reader.
Phenotyping. Scoring of susceptibility on day 6 for clinical disease and on day 15 for histological analysis after HSV infection was determined in several different ways.
(i) Clinical disease score. The clinical disease score was indicated as follows: 0, normal; 1+, light sensitivity; 2+, mild blepharitis; 3+, severe blepharitis; and 4+, ruffled fur and shaking.
(ii) Histological score. (a) Corneal pathology (group I). Corneal pathology was scored as follows: 0, clear cornea; 1+, slight cellular infiltration; 2+, moderate cellular infiltration; 3+, intense cellular infiltration; and 4+, severe necrotizing stromal keratitis.
(b) Anterior-chamber pathology (group II). Anterior-chamber pathology was scored as follows: 0, clear; 1+, slight cellular infiltration and/or fibrin; 2+, moderate cellular infiltration and/or fibrin; 3+, intense cellular infiltration and/or fibrin; and 4+, anterior synechia.
(c) Stromal keratitis score (group III). Stromal keratitis was scored as follows: 0, clear; 1+, corneal opacity and neovascularization in less than 25% of the cornea; 2+, less than 50% corneal opacity and neovascularization; 3+, less than 75% corneal opacity and neovascularization; and 4+, 75 to 100% corneal opacity and neovascularization.
Mice were assigned to one of three arbitrary severity classes based on their low, intermediate, or severe keratitis (HSK 0 to 1, 2, or 3 to 4). This trait was used to develop information on the linkage of loci that affected this qualitative severity and susceptibility trait. In addition, mice that showed at least a 1 in either of the histopathology scores were separately evaluated for the presence of HSK to determine the loci that are involved in progression from infiltration to frank disease.
Genetic analysis. Genomic DNA was prepared from the liver of each animal in the (129/SVEV x C57BL/6) x (129/SVEV x C57BL/6)F2 population. DNA from the frozen liver was prepared using a DNA tissue extraction kit (Qiagen Inc., Valencia, Calif.). PCR primers, purchased from Research Genetics (Huntsville, Ala.), were employed to perform a genome-wide scan of the mouse. Amplification was conducted using Boehringer Mannheim reagents with the following concentrations: 1x PCR buffer, 0.375 mM deoxynucleoside triphosphates, 0.5 U of of Taq polymerase/µl, 0.165 µM (each) primer, and 160 ng of genomic DNA/20 µl. The cycling conditions included a 1-min denaturing at 95°C; 35 to 50 cycles of 1 min at 94°C, 1 min 30 s at 55°C, and 2 min 10 s at 72°C; and a 6-min final extension at 72°C. The PCR products were resolved using 3% Metaphor agarose (FMC, Rockland, Maine) and were visualized through ethidium bromide staining. This method was followed for the majority of polymorphic markers.
Statistics.
Genotype data were organized and analyzed through the use of Map Manager QT (27). For quantitative trait analysis, SSLP markers were evaluated individually based on linkage to the phenotypes, and intervals containing likely QTL were identified by interval mapping using the Zmap program in QTL Cartographer model 3 (http://statgen.ncsu.edu/qtlcart/cartographer.htm4). Critical values for the declaration of significance were determined by the permutation test routine in QTL Cartographer, based on a regression model developed by Churchill and Doerge (10, 11). The values were given in terms of a likelihood ratio statistic (LRS) and were based on the following values:
= 0.37 (suggestive) (27),
= 0.1 (strongly suggestive),
= 0.05 (significant), and
= 0.01 (highly significant) 7; http://mapmgr.roswellpark.org/mapmgr.html). LRS is equivalent to 4.6 LOD (likelihood of linkage).
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FIG. 1. Kinetics of disease susceptibility. Ten mice each of the parental strains, 129/SVEV (129) and C57BL/6 (B6), and (129/SVEV x C57BL/6)F1 and F2 mice were infected with 106 PFU of HSV/mouse and followed for clinical symptoms of disease for the next 15 days.
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In contrast, the incidence and disease severity in all of the groups of parental and offspring mice were different from one another. On day 6, less-severe disease was seen in C57BL/6 mice (Fig. 2B), whereas the majority of 129/SVEV mice achieved a disease level of
3 (Fig. 2A). Both F1 (Fig. 2C) and F2 (Fig. 2D) populations showed an intermediate level of keratitis that was less severe than that shown by the 129/SVEV mice but more severe than that in C57BL/6 mice.
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FIG. 2. Severity and incidence of disease. Ten mice were examined on day 6 after HSV infection. The number of mice with an incidence at each clinical disease score is shown. The clinical scores are as follows: 0, normal; 1, light sensitivity; 2, mild blepharitis; 3, severe blepharitis; and 4, ruffled fur and shaking.
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Mapping of SSLP markers and significant threshold values. To carry out mapping studies, we generated 132 F2 mice. All of the mice were infected at 8 weeks of age and scored for disease 6 days after infection. A graph showing disease incidence and severity in the whole F2 population and also in the males (n = 74) and females (n = 58) can be seen in Fig. 3. The incidence of disease (score, >0) in the total population was 76%. More males (32%) were resistant to disease than females (14%), and their clinical signs were less severe. The mean of the disease level achieved in the total population was 1.7, with females achieving a mean score of 2.0 and males achieving a mean score of 1.5.
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FIG. 3. Disease incidence and severity in mapped F2 population. One hundred and thirty-two F2 mice were infected with HSV and examined on day 6 after infection for clinical symptoms as described in the legend to Fig. 2. The data presented are the number of mice at each level of clinical disease achieved. The three populations presented in this graph are the total population, the female group in the total population, and the male group in the total population.
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The HSK susceptibility traits were mapped using the 128 mice from the (129/SVEV x C57BL/6)F2 intercross. For assessment of the probability of genetic linkage, critical values were calculated from this database using the permutation test (7). Proposed thresholds for highly significant (
= 0.01), significant (
= 0.05), strongly suggestive (
= 0.1), and suggestive (
= 0.37) linkage (27; http://mapmgr.roswellpark.org/mapmgr.html) were assigned to maximum LRS scores, which are indicated in the tables. The order of all markers in this linkage analysis was consistent with the order predicted by the available genomic maps (Whitehead Institute-MIT and Mouse Genome Database, The Jackson Laboratory, Bar Harbor, Maine [http://www.informatics.jax.org]).
Mapping of QTL linked to the HSV clinical disease susceptibility phenotype in the F2 population. Tables 1 and 2 (All F2) show the microsatellite markers that were positive for linkage to the HSV susceptibility phenotype. In the F2 cross, QTL that contribute to this phenotype and are derived from 129/SVEV exist in five primary support intervals on chromosomes 4, 5, 12, 13, and 14. Of these five intervals, the QTL on chromosome 12 had the highest likelihood of linkage to the HSK-related clinical susceptibility trait, with a strongly suggestive likelihood of linkage (P = 0.0005). The other four QTL are also suggestive and are located on chromosome 4 near D4MIT332 (54 cM), on proximal chromosome 5 near D5Mit145 (0 cM), in the middle of chromosome 13 near D13Mit13 (35 cM), and in the middle of chromosome 14 near D14Mit197 (52 cM).
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TABLE 1. Locations of susceptibility QTL (clinical HSK)
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TABLE 2 Critical values for susceptibility QTL (clinical HSK) in Table 1
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Interval-mapping analyses supported the pointwise linkages to all the traits and enabled the accurate placement of the QTL on their respective chromosomes. In addition, the mode of inheritance was analyzed for each of the QTL, and several of them demonstrated a relationship to the phenotype that was best explained by a dominant or recessive inheritance. For example, the susceptibility allele of the QTL on chromosome 12 is recessive, consistent with its identity as a self antigen encoded by the Igh locus, in a model of self-tolerance where heterozygous expression of the deleting allele is sufficient to prevent self-recognition (2, 13, 50). Nevertheless, some females homozygous for the C57BL/6 allele at this QTL were severely affected with clinical HSK-related symptoms. The QTL on chromosome 5 shows recessive protection against clinical symptoms in females with homozygous expression of the C57BL/6 alleles. The QTL on chromosome 14 showed additive inheritance, where heterozygotes on average were characterized by intermediate clinical scores. The most significant intervals containing QTL are shown in Fig. 4. As with the pointwise linkages, the interval analysis showed strong sexual dimorphism in the QTL that underlie clinical disease in these progeny.
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FIG. 4. Intervals for HSK loci. Interval maps for the trait of HSK clinical disease show significant linkages on chromosome 12 (both sexes) (B), chromosome 5 (significant in females only) (A), and chromosome 14 (females only) (C). T, total; F, female; M, male. The QTL shown are calculated with free regression statistics except for chromosome 12 in females, where the dominant inheritance pattern (F Dom) is also depicted. In all three of the intervals shown, a down slope on both sides of the peaks could not be shown; thus, end effects need to be considered.
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FIG. 5. Histological analysis of the eye after HSV (KOS) infection. Normal uninfected tissue from C57BL/6 mice (A and B) and tissue from infected (129/SVEV x C57BL/6)F2 mice (C and D) were fixed in buffered 10% formalin, embedded in paraffin, and stained with hematoxylin and eosin. Infected mice showed corneal (C) infiltrates and swelling, neovascularization (arrows), and cellular infiltrates in the ciliary body (CB), iris, and anterior (AC) and posterior (PC) chambers. Magnification, x40 (A, C, and D) or x20 (B).
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TABLE 3. Locations of susceptibility QTL involved in corneal pathology
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TABLE 4 Critical values for susceptibility QTL involved in corneal pathology in Table 3
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TABLE 5. Locations of susceptibility QTL involved with total histopathology
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TABLE 6 Critical values for susceptibility QTL involved with total histopathology in Table 5
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FIG. 6. Intervals for ocular histopathology. Interval maps for the trait of total ocular histopathology show significant linkages on chromosome 10 (the total population) (A), chromosome 12 (both sexes) (B), and chromosome 17 (males only) (C). The QTL shown are calculated with free regression statistics. T, total; F, female; M, male.
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3.0) to this incidence and severity trait. In addition, we determined whether genes in these five intervals could act as "progressor" loci, which are genetic loci capable of producing the keratitis trait from underlying inflammation. Of the 128 mice infected with HSV, 38 failed to develop any evidence of ocular inflammation. Of the remaining 90 mice with histological evidence of ocular disease, 14 had no keratitis signs and another 16 had very modest keratitis scores (<1). The 90 mice with histological evidence of disease were scored separately for the keratitis incidence and severity trait, and these results can be seen in Table 7. Markers on chromosomes 4, 5, and 12 were associated with the progression phenotype, whereas markers on chromosomes 13 and 14 did not contribute to progression. Sexual dimorphism of this trait was also noted. |
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TABLE 7. Locations of loci that control severity and susceptibility to HSK
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In mice, HSK progression occurs after virus is cleared and requires infiltrates containing neutrophils (44) and T cells (9, 12, 17, 18, 21, 31, 40, 46). The T-cell response is predominantly a TH1 response (33), and it has been reported to be due to a cross-reaction between a corneal self antigen and a determinant on the HSV protein, UL6 (2, 50), as well as to a determinant on the immunoglobulin molecule, immunoglobulin G2. On the other hand, there have been studies showing that T-cell factors in the absence of antigen-specific T cells are sufficient, since a T-cell receptor (TcR) transgenic mouse without cross-reactive T cells can show symptoms of keratitis (15).
Confirmation of a previously identified HSK susceptibility locus. Previous results examining multiple mouse strains for susceptibility to HSV-1 keratitis showed that genes close to the Igh-1 immunoglobulin allotype locus on chromosome 12 were associated with this trait; the H-2 haplotype, on the other hand, was not (13). Susceptibility was associated with Igh-1c, Igh-1dM, and Igh-1e alleles; resistance was associated with the Igh-1a, Igh-1b, and Igh-1j alleles. Igh-congenic mice on an H-2d background show HSK according to their allotype.
In the present study, we used two inbred strains of mice, C57BL/6 and 129/SVEV, which share an MHC haplotype (both are H-2b) but differ in their non-MHC genes. That the two strains differ greatly in their susceptibilities to HSV infection, with C57BL/6 being highly resistant, has been previously reported (31, 32, 41). In this study, using HSV-1 (KOS) at 106 PFU/mouse, 30% of the C57BL/6 mice showed disease symptoms compared to 80% of the 129/SVEV mice. That this was not due to a difference in infectibility was shown by the fact that in both groups of parental mice given virus, all of the mice responded to HSV antigen in culture. This indicated that our method of inoculation resulted in 100% virus exposure. In the F2 population that was generated and then mapped, the incidence of disease symptoms was 76%. Of the 32 F2 mice that did not show disease symptoms, almost half (15 of 32) showed evidence of viral infection histologically, increasing the incidence of measured infectivity to 87%. Finally, all but 4 of the 132 F2 mice showed titers of anti-HSV antibody that exceeded 1/1,000 dilution (not shown), again indicating the success of infection in all animals.
Carrying out a genome-wide screen at a 10-cM range, we found that in the whole F2 population, the locus at chromosome 12, close or identical to the Igh locus and previously identified, showed the most significant level of linkage with the susceptibility trait as determined by clinical disease symptoms. These included light sensitivity, blepharitis, and ruffled fur. However, we also found additional novel loci on chromosomes 4, 5, 13, and 14 that regulate this trait. Furthermore, in female mice, the level of significance of the QTL on chromosomes 5 and 14 exceeded that of the chromosome 12 QTL for HSK-related clinical disease incidence and severity.
This analysis examined the total response to virus after corneal scarification and included generalized symptoms as well as specific ocular effects seen only by histology. Thus, the virus infects keratocytes of the eye and induces an inflammatory response in multiple locations and also infects the epithelium surrounding the eye. Susceptibility probably involves factors besides cellular susceptibility to infection, including the immune response, both innate and antigen specific, to virus and to autoantigens.
Therefore, we also used the genome-wide screen to examine the ocular histopathological traits, determining involvement of the cornea as well as other components of the eye. In this case, we identified chromosomes 12 and 13 as loci with nearly suggestive to significant levels of association which were shared with the clinical disease symptoms described above. We also found new loci at chromosomes 10 and 17 which were unique to the analysis involving ocular histopathology.
Loci in males and females: potential modifiers. We also examined the effect of sex on the response to HSV, which was made evident by the fact that the females were more susceptible to HSV disease, although there was no obvious evidence that they had a different disease phenotype.
Examination of the QTL screen in males and females separately revealed two different patterns of responsiveness. In one case, the LRS for the total population was greater than that for either the male or female group, although the QTL was linked to the phenotype at some level in each group. This could be due to the number of mice analyzed. This seems to be true for chromosome 12 and one interval on chromosome 13 at approximately 32 to 35 cM, which were only modestly significant in males and females when they were considered separately.
In the second case, the male or female value was higher than that of the total because the noncontributing male or female population caused the value in the total population to be lower. The QTL on chromosomes 5 and 14 were contributed by either females or males but not both. The QTL on chromosome 10 may be female specific, as it was quite modest in males for predicting histopathology scores.
An interesting interpretation of these data is that the locus on chromosome 12 (and possibly chromosome 13) is the key gene(s) in governing the level and character of the immune response to the virus and that the other QTL cause the disease to progress from inflammatory infiltrates to frank keratitis, with its associated clinical signs. This is consistent with the identity of the chromosome 12 QTL as a self antigen, because tolerance to the self antigen could predict the absence of an immune response to a cross-reactive viral antigen (2, 50). The fact that these two loci are also the loci shared between the different phenotypes also supports the idea that these are the key genes involved in susceptibility and that they act at an early stage. In males, the actions of the chromosome 12 and 13 QTL are apparently insufficient to create the environment necessary for frank keratitis, and a locus on chromosome 4 is necessary for full susceptibility and progression to disease (Tables 1 and 7). In females, the progressor loci are completely different and located on chromosomes 5 and 14. These QTL apparently govern the severity of the clinical signs of keratitis, and we would speculate that they act at a later stage. It should be noted that the clinical score is given on day 6 and the histological score is given on day 15, which may lead to some of the different loci seen.
Candidate genes. The analysis presented in this study does not allow us to identify the exact genes involved in herpes keratitis, but there are many genes of interest related to already-identified factors involved in the severity of HSV infection, as seen in Table 8 and the genetic intervals presented in Fig. 4 and 6, which could provide potential targets for future study.
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TABLE 8. Candidate genes
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Also on chromosome 5 is a gene, Nos3, for an endothelial and neuronal nitric oxide synthase. NO has been shown to be important in HSV infectivity after corneal infection (23, 43). Also at this locus is the gene Fgfr3. It has been previously reported that a receptor for basic FGF serves as a receptor for HSV-1 (19), and Fgfr3 and Fgfr4, a candidate gene on chromosome 13, could act as such receptors. Not surprisingly, there have also been many studies describing the importance of FGF in keratitis (14, 36). Another candidate gene, Fgf14 or Fhf-4, on chromosome 14, shown to be important in the nervous system (39, 47), could play a role in herpesvirus infectivity.
There is a large literature on cytokine and chemokine (24) involvement in HSV infection, and it includes molecules such as gamma interferon (5, 25). Granulocyte (44) and macrophage infiltrates in keratitis (3, 45) could be affected by interleukin-6 (Il6 on chromosome 5) and interleukin-9 (Il9 on chromosome 13), as well as the gene for the macrophage inhibitory factor, a candidate gene found on chromosome 10.
Finally, both tumor necrosis factor (TNF) in keratitis pathogenesis (20) and a member of the TNF receptor family acting as another HSV receptor (48) have been described. In the mapping studies here, the candidate genes include a gene for a novel member of the TNF family called TRANCE, or Tnfsf11 (chromosome 14), as well as a gene for a molecule involved in TNF receptor death domain adapter protein, or Cradd (1) (chromosome 10).
This work was supported by the G. Harold and Leila Y. Mathers Charitable Foundation and by NIH grant AI42395.
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