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Journal of Virology, December 2002, p. 12974-12980, Vol. 76, No. 24
0022-538X/02/$04.00+0 DOI: 10.1128/JVI.76.24.12974-12980.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Department of Cell Biology, The Scripps Research Institute, La Jolla, California 92037,1 Viral Hepatitis Research Unit, West China Hospital, West China Medical School, Sichuan University, Chengdu, Sichuan 610041, People's Republic of China,2 Department of Molecular Genetics, University of Illinois at Chicago, College of Medicine, Chicago, Illinois 606073
Received 13 August 2002/ Accepted 16 September 2002
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Because HBV replication occurs by reverse transcription of the pregenomic transcript, it is apparent that the regulation of the level of synthesis of viral RNAs will also modulate HBV replication. Viral transcription is regulated by ubiquitous and liver-enriched transcription factors (10, 19, 20, 24). The role of liver-enriched transcription factors in controlling viral RNA synthesis suggested that transcription restricts viral biosynthesis to hepatocytes. This contention was supported by the observation that the liver-enriched nuclear hormone receptors, HNF4 and PPAR
plus RXR
, are essential for HBV pregenomic RNA synthesis and viral replication in nonhepatoma cell lines (21). This study also demonstrated that nuclear hormone receptor-mediated viral replication was negatively regulated by HNF3. HNF3 appears to inhibit the synthesis of the HBeAg-encoding precore 3.5-kb transcript to a lesser extent than the pregenomic 3.5-kb transcript. This may promote the HBeAg-mediated inhibition of viral replication and result in a larger decrease in viral replication than 3.5-kb RNA synthesis (21, 22).
In this study, the roles of HNF3ß in regulating viral transcription and replication in vivo were examined by using the HBV transgenic mouse model of chronic HBV infection (8). The HBV transgenic mice were bred with transgenic mice that overexpress the HNF3ß polypeptide in the liver (16). The rat HNF3ß-expressing HBV transgenic mice were examined for viral transcription and replication in the liver. These mice demonstrate that elevated levels of HNF3ß expression inhibit viral replication in the liver in a manner similar to that observed in cell culture. Viral replication is reduced by HNF3ß overexpression to a significantly greater extent than the HBV 3.5-kb RNA. This suggests that physiological or therapeutic stimuli that modulate HBV 3.5-kb RNA synthesis to a modest extent may have significant antiviral potential.
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The production and characterization of the TTR-HNF3ß (T-77) transgenic mice have been described previously (16). These mice express the rat HNF3ß polypeptide from a transgene construct by using the mouse transthyretin promoter to direct the transcription of the rat HNF3ß cDNA in the liver and brain (16, 25). TTR-HNF3ß (T-77) transgenic mice display growth retardation, depletion of hepatic glycogen storage, elevated levels of bile acids in the serum, and severe ataxia (11, 16, 25). The mice used in the breeding experiments were hemizygous for the TTR-HNF3ß (T-77) transgene and were maintained on the CD1 genetic background (16).
TTR-HNF3ß (T-77) HBV transgenic mice were generated by mating the HBV transgenic mice with the TTR-HNF3ß (T-77) transgenic mice. The resulting TTR-HNF3ß (T-77) HBV transgenic F1 mice were screened for the HBV transgene and TTR-HNF3ß (T-77) transgene by PCR analysis of tail DNA. Tail DNA was prepared by incubating 1 cm of tail in 500 µl of a mixture containing 100 mM Tris hydrochloride (pH 8.0), 200 mM NaCl, 5 mM EDTA, and 0.2% (wt/vol) sodium dodecyl sulfate (SDS) containing 100 µg of proteinase K per ml for 16 to 20 h at 55°C. Samples were centrifuged at 14,000 rpm in an Eppendorf 5417C microcentrifuge for 5 min, and the supernatant was precipitated with 500 µl of isopropanol. DNA was pelleted by centrifugation at 14,000 rpm in an Eppendorf 5417C microcentrifuge for 5 min and subsequently dissolved in 100 µl of 5 mM Tris hydrochloride (pH 8.0)-1 mM EDTA. The HBV transgene was identified by PCR analysis with the oligonucleotides TCGATACCTGAACCTTTACCCCGTTGCCCG (oligo XpHNF4-1; HBV coordinates 1133 to 1159) and TCGAATTGCTGAGAGTCCAAGAGTCCTCTT (oligo CpHNF4-2; HBV coordinates 1683 to 1658) and 1 µl of tail DNA. The TTR-HNF3ß (T-77) transgene was identified by PCR analysis with the oligonucleotides AAAGTCCTGGATGCTGTCCGAG and CAGACATGATAAGATACATTGATG and 1 µl of tail DNA. The samples were subjected to 42 amplification cycles involving denaturation at 94°C for 1 min, annealing at 55°C for 1 min, and extension from the primers at 72°C for 2 min. A PCR product of 551 bp indicated the presence of the HBV transgene. A PCR product of approximately 300 bp indicated the presence of the TTR-HNF3ß (T-77) transgene. The 20-µl reaction conditions used were as described by the manufacturer (PGC Scientifics) and contained 1.5 U of Taq DNA polymerase.
HBV DNA and RNA analysis. Total DNA and RNA were isolated from livers of 4-week-old HBV transgenic mice as described previously (2, 18). DNA (Southern) filter hybridization analyses were performed with 20 µg of HindIII-digested DNA (18). Filters were probed with 32P-labeled HBVayw genomic DNA (4) to detect HBV sequences. RNA (Northern) filter hybridization analyses were performed with 10 µg of total cellular RNA as described previously (18). Filters were probed with 32P-labeled HBVayw genomic DNA to detect HBV sequences and the mouse glyceraldehyde 3-phosphate dehydrogenase (GAPDH) cDNA to detect the GAPDH transcript used as an internal control (17).
RNase protection assays were performed with the Pharmingen Riboquant kit, and riboprobes were synthesized by using the Ambion Maxiscript kit as described by the manufacturers. The mouse HNF3
, HNF3ß, and HNF3
transcripts and the rat HNF3ß transcript were detected by RNase protection analysis with 20 µg of total cellular RNA as previously described (16). Transcription initiation sites for the 3.5-kb HBV transcripts were examined with 20 µg of total cellular RNA and a 333-nucleotide-long (HBV coordinates 1990 to 1658) 32P-labeled HBV riboprobe. The transcription initiation site for the 2.4-kb HBV transcript was examined with 20 µg of total cellular RNA and a 327-nucleotide-long (HBV coordinates 2708 to 3034) 32P-labeled HBV riboprobe. As an internal control for the RNase protection analysis, a 32P-labeled mouse ribosomal protein L32 gene riboprobe spanning 101 nucleotides of exon 3 was utilized (3). All riboprobes contained additional flanking vector sequences that are not protected by HBV transgenic mouse RNA.
Filter hybridization and RNase protection analysis were quantitated by phosphorimaging with a Packard Cyclone Storage Phosphor System.
HBV antigen analysis. HBeAg analysis was performed with 20 µl of mouse serum and the HBe radioimmunoassay as described by the manufacturer (DiaSorin). The level of antigen was determined in the linear range of the assay. Immunohistochemical detection of HBcAg in paraffin-embedded mouse liver sections was performed as previously described (8).
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and HNF3
transcripts are also decreased between two- and fivefold in the rat HNF3ß-expressing HBV transgenic mice compared with control rat HNF3ß(-) HBV transgenic mice (Fig. 1B). These changes in the levels of HNF3 isoform expression in the livers of the HBV transgenic mice are similar to those originally described for the rat HNF3ß-expressing transgenic mice (16).
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FIG. 1. RNase protection analysis of the rat HNF3ß, mouse HNF3 , mouse HNF3ß, and mouse HNF3 transcripts from the livers of HBV transgenic mice. (A) Groups of three mice of each sex and genotype are shown. The rat HNF3ß, mouse HNF3 , mouse HNF3ß, and mouse HNF3 riboprobes used were described previously (16). The rat HNF3ß, mouse HNF3ß, mouse HNF3 , and mouse HNF3 RNAs protect fragments of 480 (rHNF3ß), 332 (mHNF3ß), 231 (mHNF3 ), and 150 (mHNF3 ) nucleotides, respectively. -, HBV transgenic mice lacking the rat HNF3ß transgene; +, HBV transgenic mice hemizygous for the rat HNF3ß transgene. (B) Quantitative analysis of the rat HNF3ß, mouse HNF3ß, mouse HNF3 , and mouse HNF3 RNA levels in HBV transgenic mice. The levels of the HNF3 RNAs are reported relative to the mouse HNF3ß RNA present in the liver of control male rat HNF3ß(-) HBV transgenic mice, which is designated as having a relative activity of 1.0. The mean HNF3 RNA levels plus standard deviations derived from six male rat HNF3ß(-) HBV transgenic mice, six male rat HNF3ß(+) HBV transgenic mice, seven female rat HNF3ß(-) HBV transgenic mice, and four female rat HNF3ß(+) HBV transgenic mice are shown. The lower levels of the mouse HNF3 RNAs in the rat HNF3ß-expressing HBV transgenic mice are statistically significantly different from their levels in the control rat HNF3ß(-) HBV transgenic mice by Student's t test (P < 0.05).
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Effect of rat HNF3ß expression on viral 3.5- and 2.1-kb transcript synthesis in HBV transgenic mice. The rat HNF3ß-expressing HBV transgenic mice were examined for their steady-state levels of HBV transcripts by analysis of the total liver RNA (Fig. 2). The levels of the HBV 3.5- and 2.1-kb transcripts in the livers of the rat HNF3ß-expressing HBV transgenic mice were two- to threefold lower than the levels of these viral transcripts in control rat HNF3ß(-) HBV transgenic mice (Fig. 2). This result is consistent with the lower level of serum HBeAg in rat HNF3ß-expressing HBV transgenic mice and the observation that HNF3ß modestly inhibits HBV transcription in cell culture (21, 22).
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FIG. 2. RNA (Northern) filter hybridization analysis of HBV transcripts in the livers of HBV transgenic mice. (A) Groups of three mice of each sex and genotype are shown. The GAPDH transcript was used as an internal control for the quantitation of the HBV 3.5- and 2.1-kb RNAs. The probes used were HBVayw genomic DNA plus GAPDH cDNA. -, HBV transgenic mice lacking the rat HNF3ß transgene; +, HBV transgenic mice hemizygous for the rat HNF3ß transgene. (B) Quantitative analysis of the HBV 3.5- and 2.1-kb RNA levels in HBV transgenic mice. The mean HBV 3.5- and 2.1-kb RNA levels plus standard deviations derived from six male rat HNF3ß(-) HBV transgenic mice, six male rat HNF3ß(+) HBV transgenic mice, seven female rat HNF3ß(-) HBV transgenic mice, and four female rat HNF3ß(+) HBV transgenic mice are shown. The lower levels of the HBV 3.5- and 2.1-kb RNA in the rat HNF3ß-expressing HBV transgenic mice are statistically significantly different from their levels in the control rat HNF3ß(-) HBV transgenic mice by a Student's t test (P < 0.05).
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FIG. 3. DNA (Southern) filter hybridization analysis of HBV DNA replication intermediates in the livers of HBV transgenic mice. (A) Groups of three mice of each sex and genotype are shown. The HBV transgene (TG) was used as an internal control for the quantitation of the HBV replication intermediates. The probe used was HBVayw genomic DNA. TG, HBV transgene; RC, HBV relaxed circular replication intermediates; SS, HBV single-stranded replication intermediates; -, HBV transgenic mice lacking the rat HNF3ß transgene; +, HBV transgenic mice hemizygous for the rat HNF3ß transgene. (B) Quantitative analysis of the HBV DNA replication intermediate (RI) levels in HBV transgenic mice. The mean HBV DNA replication intermediate levels plus standard deviations derived from six male rat HNF3ß(-) HBV transgenic mice, six male rat HNF3ß(+) HBV transgenic mice, seven female rat HNF3ß(-) HBV transgenic mice, and four female rat HNF3ß(+) HBV transgenic mice are shown. The lower levels of the HBV DNA replication intermediates in the rat HNF3ß-expressing HBV transgenic mice are statistically significantly different from their levels in the control rat HNF3ß(-) HBV transgenic mice by Student's t test (P < 0.05). (C) Quantitative analysis of the ratio of HBV DNA replication intermediates synthesized per unit of HBV 3.5-kb RNA present in HBV transgenic mice. The mean HBV DNA to 3.5-kb RNA ratio plus standard deviations derived from six male rat HNF3ß(-) HBV transgenic mice, six male rat HNF3ß(+) HBV transgenic mice, seven female rat HNF3ß(-) HBV transgenic mice, and four female rat HNF3ß(+) HBV transgenic mice are shown. The lower ratio of HBV DNA to 3.5-kb RNA in the rat HNF3ß-expressing HBV transgenic mice are statistically significantly different from their ratios in the control rat HNF3ß(-) HBV transgenic mice by Student's t test (P < 0.05).
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FIG. 4. RNase protection analysis mapping the transcription initiation sites of the precore (PC) and pregenomic (C) transcripts from the livers of HBV transgenic mice. (A) Groups of three mice of each sex and genotype are shown. The 3' ends of the all the HBV transcripts corresponding to the polyadenylation site (pA) of these RNAs also generated a protected fragment in this analysis. The riboprobes used included the HBVayw sequence spanning nucleotide coordinates 1990 to 1658 and the mouse ribosomal protein L32 gene riboprobe spanning 101 nucleotides of exon 3. The 3.5-kb HBV RNAs protect fragments of 283 (pA), 206 (PC), and 175 (C) nucleotides, respectively. The mouse ribosomal protein L32 RNA protects a fragment of 101 nucleotides, designated L32, when probed with the L32 probe. -, HBV transgenic mice lacking the rat HNF3ß transgene; +, HBV transgenic mice hemizygous for the rat HNF3ß transgene. (B) Quantitative analysis of the HBV precore/pregenomic RNA ratios in HBV transgenic mice. The mean HBV precore/pregenomic RNA ratios plus standard deviations derived from six male rat HNF3ß(-) HBV transgenic mice, six male rat HNF3ß(+) HBV transgenic mice, seven female rat HNF3ß(-) HBV transgenic mice, and four female rat HNF3ß(+) HBV transgenic mice are shown. The higher HBV precore/pregenomic RNA ratios in the rat HNF3ß-expressing HBV transgenic mice are statistically significantly different from their ratios in the control rat HNF3ß(-) HBV transgenic mice by Student's t test (P < 0.05).
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FIG. 5. RNase protection analysis mapping the transcription initiation site of the large surface antigen transcript from the livers of HBV transgenic mice. (A) Groups of three mice of each sex and genotype are shown. The riboprobes used included the HBVayw sequence spanning nucleotide coordinates 3054 to 2708 and the mouse ribosomal protein L32 gene riboprobe spanning 101 nucleotides of exon 3. The 3.5-kb HBV RNA protects a fragment of 327 nucleotides and the 2.4-kb HBV RNA protects a fragment of 226 nucleotides. The mouse ribosomal protein L32 RNA protects a fragment of 101 nucleotides, designated L32, when probed with the L32 probe. -, HBV transgenic mice lacking the rat HNF3ß transgene; +, HBV transgenic mice hemizygous for the rat HNF3ß transgene. (B) Quantitative analysis of the HBV 2.4-kb RNA levels in HBV transgenic mice. The mean HBV 2.4-kb RNA levels plus standard deviations derived from six male rat HNF3ß(-) HBV transgenic mice, six male rat HNF3ß(+) HBV transgenic mice, seven female rat HNF3ß(-) HBV transgenic mice, and four female rat HNF3ß(+) HBV transgenic mice are shown. The lower levels of the HBV 2.4-kb RNAs in the rat HNF3ß-expressing HBV transgenic mice are statistically significantly different from their levels in the control rat HNF3ß(-) HBV transgenic mice by Student's t test (P < 0.05).
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FIG. 6. Immunohistochemical staining of HBcAg in the livers of HBV transgenic mice. Nuclear staining of HBcAg is observed throughout the liver, whereas cytoplasmic staining is located primarily in the centrolobular hepatocytes in the livers of control rat HNF3ß(-) HBV transgenic mice (left panels). Rat HNF3ß(+) HBV transgenic mice expressing the rat HNF3ß transgene display minimal HBcAg staining in their hepatocytes (right panels). Results for 4-week-old male (M) and female (F) mice are shown. The yellow size bar represents 500 µm.
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plus PPAR
, are a major determinant restricting HBV viral replication to cells of hepatic origin (21). These analyses also demonstrated that the liver-enriched transcription factor HNF3 negatively regulated nuclear hormone receptor-mediated HBV pregenomic RNA synthesis and viral replication in cell culture (21, 22). In this study, the possibility that HNF3ß might also negatively regulate viral transcription and replication in vivo in a manner similar to that observed in cell culture was investigated by using an HBV transgenic mouse model (8). This was achieved by characterizing the viral transcripts and replication intermediates in HBV transgenic mice expressing the rat HNF3ß polypeptide in their liver (8, 16).
HBV transgenic mice were bred with transgenic mice expressing the rat HNF3ß polypeptide in their liver utilizing the transthyretin promoter to produce rat HNF3ß-expressing HBV transgenic mice (8, 16). The rat HNF3ß-expressing HBV transgenic mice were shown to express approximately 10-fold-higher levels of the rat HNF3ß transcript than the endogenous mouse HNF3ß transcript (Fig. 1) (16). The expression of the rat HNF3ß polypeptide also results in the reduction of the level of expression of the endogenous mouse HNF3
and HNF3
transcripts in rat HNF3ß-expressing HBV transgenic mice (Fig. 1) (16). The levels of expression of additional liver-enriched transcription factors that can modulate HBV transcription, including C/EBP
, C/EBPß, HNF1
, and HNF4
, are not greatly affected by the alteration in the levels of HNF3 isoform expression in rat HNF3ß-expressing transgenic mice (16). In addition, the physiological alteration in the livers of the rat HNF3ß-expressing HBV transgenic mice at 4 weeks of age did not result in measurable liver damage or detectable expression of the cytokines tumor necrosis factor alpha (TNF-
), alpha/beta interferon (IFN-
/ß), and IFN-
(K. E. Banks and A. McLachlan, unpublished data). Consequently, the effect of the expression of the rat HNF3ß polypeptide on viral transcription and replication in the rat HNF3ß-expressing HBV transgenic mice is not influenced by cytokine-mediated processes that can downregulate HBV viral replication (1, 6).
The levels of the HBV transcripts in the rat HNF3ß-expressing HBV transgenic mice were compared with those of the control rat HNF3ß(-) HBV transgenic mice (Fig. 2, 4, and 5). As observed in cell culture (21, 22), elevated levels of HNF3ß were associated with a modest decrease in the level of expression of the two major HBV transcripts. This observation demonstrates that the negative effect of a specific transcription factor on HBV transcription and replication observed in cell culture can be recapitulated in vivo in the HBV transgenic mouse model system. The mechanism of HNF3ß-mediated inhibition of viral transcription in vivo probably does not involve decreasing HBV promoter activity, because HNF3 has been shown to activate the level of transcription from the nucleocapsid and large surface antigen promoters in reporter gene analysis (9, 15). In addition, elevated levels of HNF3ß in transgenic mice are associated with increased levels of expression of HNF3-responsive genes, such as the insulin-like growth factor binding protein 1 gene (16). Additional cell culture analysis with viral replication-competent genomes suggests HNF3ß may reduce viral transcription by interfering with the transcriptional elongation step rather than affecting promoter activity (22).
RNase protection analysis demonstrated that the increased expression of HNF3ß affects the relative level of expression of the precore and pregenomic 3.5-kb RNA transcripts in HBV transgenic mice (Fig. 4). The ratio of the precore to pregenomic transcripts increases approximately threefold due to the expression of HNF3ß. This observation is similar to the effect of HNF3ß expression on precore and pregenomic RNA synthesis in cell culture (21, 22). Therefore, HNF3ß preferentially inhibits pregenomic RNA synthesis compared with precore RNA in vivo, as well as in cell culture. HNF3ß also inhibits the level of the HBV 2.4-kb transcript approximately fourfold in vivo (Fig. 5). This indicates that all of the HBV transcripts are susceptible to HNF3ß-mediated inhibition of RNA synthesis. Therefore, increased expression of HNF3ß appears to coordinately downregulate HBV transcription. The coordinate downregulation of the HBV transcription by HNF3ß would be expected to translate into a corresponding reduction in viral replication.
The level of viral replication intermediates and associated cytoplasmic core protein in the liver of the rat HNF3ß-expressing HBV transgenic mice was dramatically reduced compared with the control rat HNF3ß(-) HBV transgenic mice (Fig. 3 and 6). The reduction in viral replication intermediates due to the elevated level of HNF3ß expression is greater than the reduction in HBV 3.5-kb RNA (Fig. 3C). This observation is due in part to the increase in HNF3ß expression decreasing pregenomic RNA synthesis to a greater extent than precore RNA synthesis (Fig. 4B), which appears to contribute to the disproportionate decrease in viral replication compared with HBV RNA synthesis. Regardless of the mechanisms of HNF3ß-mediated downregulation of HBV replication, it appears that any physiological stimulus that modulates HNF3 isoform expression may significantly affect virus synthesis. In addition, increasing the level of the HNF3ß isoform in the liver may represent an appropriate target for HBV antiviral therapy.
This work was supported by a postdoctoral fellowship from the West China University of Medical Sciences of the People's Republic of China to H.T. and by Public Health Service grant AI30070 from the National Institutes of Health.
Publication no. 14998-CB from The Scripps Research Institute. ![]()
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knockout mouse. Mol. Cell. Biol. 18:3059-3068.
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