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Journal of Virology, November 2002, p. 11003-11011, Vol. 76, No. 21
0022-538X/02/$04.00+0 DOI: 10.1128/JVI.76.21.11003-11011.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Department of Botany and Plant Pathology and Center for Gene Research and Biotechnology, Oregon State University, Corvallis, Oregon 97331
Received 24 May 2002/ Accepted 26 July 2002
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Interestingly, several groups of the rod-shaped plant viruses move from cell to cell in a capsid protein (CP)-independent manner (reviewed in reference 7). In contrast, filamentous viruses generally require CP for cell-to-cell movement (10, 15). Among spherical viruses, some do not require CP for movement, whereas others do (7). Variation in CP requirements irrespective of the virion morphology presumes different mechanisms of cell-to-cell movement or a different distribution of functional assignments among individual virus proteins.
Long-distance transport of the plant viruses proceeds in the phloem. The entry into and exit from the phloem involves extensive, tissue-specific interactions between virus-coded proteins and plant proteins restricting viral transport (11). Due to important yet poorly understood specialization of the plasmodesmata interconnecting the cells within the phloem, viral loading into and unloading from the phloem has more stringent requirements than cell-to-cell movement in mesophyll (25, 36, 45). This tendency is illustrated by the large number of viruses that require virion formation for long-distance, but not cell-to-cell, transport (7, 8). In fact, only a few viruses are capable of spreading systemically in a nonvirion form (29, 41, 44, 47). These viruses, however, code for long-distance transport factors (LTFs) that are specifically required for efficient systemic spread (13, 14, 44, 48). Strikingly, several LTFs are suppressors of RNA silencing. Correlation between silencing suppression and transport activities of LTFs suggests that the ability of some viruses to spread systemically is linked to overcoming systemic RNA silencing (9, 21, 24, 51). As a general picture of viral long-distance transport emerges, the following two questions need to be addressed. What is the mechanistic connection between cell-to-cell movement and long-distance transport processes that are mediated by the MPs and LTFs, respectively? For the viruses whose transport requires both virion formation and LTF function, does the LTF bind virions? In this work, we address these questions with Beet yellows virus (BYV) as a model. According to present taxonomy, BYV belongs to the genus Closterovirus within the large family Closteroviridae (23).
Closteroviruses possess complex, positive-strand RNA genomes (Fig. 1) that are encapsidated into exceptionally long filamentous virions (23). These virions possess two distinct parts, a virion body that is assembled by major CP and a tail assembled by a minor capsid protein (CPm) (1). Genetic analyses revealed that at least five proteins are required for BYV cell-to-cell movement (Fig. 1) (2, 40). These proteins include CP, CPm, and three MPs, namely, the 6-kDa protein (p6), the Hsp70homolog (Hsp70h), and the 64-kDa protein (p64). Intriguingly, the two latter proteins were found in tight association with the virions and were implicated in virion formation (32, 46, 49). Further analyses revealed strong correlation between BYV cell-to-cell movement and virion assembly and showed that Hsp70h is required for tail formation (3). Accordingly, the tail was conceptualized as an Hsp70h-powered movement device attached to the virion body (3).
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FIG. 1. Genome map of BYV. L-Pro, leader proteinase (the bent arrow shows the site of autocatalytic processing); MET, HEL, and POL, the methyltransferase, RNA helicase, and RNA polymerase domains of the BYV replicase, respectively.
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In vitro translation and immunochemical analyses. Preparation and translation of the capped mRNAs as well as immunochemical analyses were conducted as described previously (32). Histidine-tagged p20 was expressed in plants by using a Tobacco etch virus-derived gene expression vector and was isolated as described previously (16). Each immunoprecipitation reaction mixture, except for the negative control, contained 0.5 µg of p20 and monoclonal anti-histidine tag antibody (Amersham-Pharmacia Biotech) in 1:500 dilution. Detection of p20 in virions was conducted with polyclonal antiserum against synthetic, C-terminal oligopeptide of p20 (CELDKSGGELEILTFSKNEVFL) that was generated at Genemed Synthesis, Inc. (San Francisco, Calif.). Alternatively, anti-p20 antiserum to full-size, recombinant p20 kindly provided by R. Creamer (New Mexico State University) was used. The anti-Hsp70h (32) as well as anti-CP and anti-CPm sera (3) were described previously.
Agroinfection of plants and transient protein expression. The previously described plasmid pBYV-GFP (40) was used as the source of virus sequences. A fragment of BYV cDNA (nucleotides 1 to 2548) was PCR amplified with concomitant addition of XbaI sites at either end of the product and was cloned into an XbaI site downstream from the Cauliflower mosaic virus 35S RNA polymerase promoter cassette. This cassette was previously generated by insertion of the 35S promoter between NotI and XbaI sites in a pBlueScript SK(II) plasmid (Stratagene) and contained nucleotides -417 to -1 relative to the transcription initiation site. A primer (5'-CATTTCATTTGGAGAGCAGTTTTTAACCATCCTTC) containing the 3' end of the 35S promoter and the 5' end of the BYV cDNA (underlined) was used for site-directed mutagenesis to remove nonvirus sequences as described previously (50). The DNA fragment containing the 35S promoter and 5' region of the BYV cDNA was PCR amplified by using the primers 5'-TAGAGCTCAACATGGTGGAGCAC and 5'-CATCTAGAAGTTCACCCGGAG and was cloned into minibinary vector pCB301 digested with SacI and XbaI (53) to yield a pCB-35S-5BYV-NOS plasmid. A primer complementary to the 3' end of the BYV sequence followed by a self-cleaving ribozyme (27) was synthesized (5'-TACCCGGGCCGTTTCGTCCTCACGGACTCATCAGAAGACATGTGAATCATGTCTTGACGGCCCTTATTTTTTCTTC) and used in combination with the upstream primer, 5'-ATTGGCAAACGCGGGATCCCGT, to amplify the 3' region of the BYV-green fluorescent protein (GFP) cDNA and to add ribozyme sequence. This PCR product was digested with BamHI and XmaI and was cloned into pCB-35S-5BYV-NOS plasmid to produce pCB-35S-5'3'BYV-Rib-NOS. Finally, a XbaI-BamHI fragment of the BYV-GFP cDNA was transferred into pCB-35S-5'3'BYV-Rib-NOS to yield p35S-BYV-GFP.
The ORFs encoding BYV p20, Hsp70h, the 42-kDa N-terminal domain (N42), and the 23-kDa C-terminal domain (C23) were cloned into minibinary vector for Agrobacterium-mediated, transient expression in a free form or as a fusion with GFP as described previously (38). The resulting plasmids were mobilized into Agrobacterium tumefaciens strain EHA 105 by electroporation. Young Nicotiana benthamiana (6- to 8-leaf stage) plants were inoculated by using a 3-ml plastic syringe to infiltrate the leaf tissue. The same protocol and A. tumefaciens strain C58 were used for plant inoculation with the p35S-BYV-GFP plasmid.
Generation and analyses of the mutant BYV variants.
Mutant BYV variant
p20 was described previously (2), whereas mutations Stop-49 and Stop-81 were generated by using the primers 5'-CTCCACGATCTCTAGTTGAATGTTAAC and 5'-GGTCTCTTACACTTGAGTGAGTTCTGG, respectively (the premature stop codons are underlined). Each of the Stop mutations was introduced into pBYV-GFP and was assayed for cell-to-cell movement by using inoculation of Claytonia perfoliata leaves as described previously (40). In addition, each of the four mutations was introduced into p35S-BYV-GFP via transferring BamHI-BstEII fragments from the corresponding pBYV-GFP variant. Cell-to-cell movement in C. perfoliata and long-distance transport in N. benthamiana were monitored with epifluorescent microscopy (40), whereas subcellular localization of the GFP-tagged proteins in epidermal cells of N. benthamiana was imaged by using confocal laser scanning microscopy as described previously (38). Isolation of the virions, sucrose density gradient centrifugation, and characterization of the virions' protein composition were as described previously (32).
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TABLE 1. Yeast two-hybrid screensa
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To reconfirm these observations, we transformed yeast strains possessing pACT-Hsp70h, pACT-N42, or pACT-C23 with pAS-p20. As expected, we recovered a number of colonies that grew on the medium lacking His and were also ß-Gal positive (Table 1). To further determine if the interaction between Hsp70h and p20 is specific, we tested combination of pACT-GUS with pAS-p20. The fact that no colonies were found (Table 1) confirmed the specificity of Hsp70h-p20 interaction. We have also tested combinations of pACT-p20 with pAS-N42 and pAS-C23 and recovered ß-Gal-positive colonies in each experiment (Table 1). It should be noted, however, that the intensity of blue staining was lower than that of the reciprocal combinations. Apparently, the level of interaction between p20 and Hsp70h domains in yeast may be affected by the structure of the fusion products.
To examine the ability of p20 to interact with itself, we tested the combination of pACT-p20 and pAS-p20. Since the colonies were of intense blue color (Table 1, final row), we concluded that p20 is capable of efficient di- or multimerization. The observed interactions between p20 and Hsp70h, N42, and C23 as well as p20 self-interaction were also quantified by using in vitro ß-Gal assays. As seen in Fig. 2, the results of these assays are in full agreement with the qualitative observations summarized in Table 1.
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FIG. 2. ß-Gal assay for yeast two-hybrid interactions with BYV p20. Interaction in yeast was tested between p20 and Hsp70h, N42, C23, p20 (self-interaction), or empty vector (negative control). The ß-Gal activity in units was calculated as described in Materials and Methods. The data represent means and standard deviations of four experiments.
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FIG. 3. Coimmunoprecipitation of the 35S-labeled Hsp70h (A) and N42 and C23 (B) with unlabeled, histidine-tagged p20. For lanes under the heading translation products, the isotope-labeled products of in vitro translation reactions programmed with no RNA (negative control; -RNA lane), Brome mosaic virus RNA (positive control; BMV lane), GUS mRNA (GUS lane), Hsp70h mRNA (Hsp lane), N42 mRNA (N42 lane), or C23 mRNA (C23 lane) were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, blotted onto a nitrocellulose membrane, and subjected to autoradiography. For lanes under the heading immunoprecipitation using anti-His MAB, the indicated labeled translation products were mixed with histidine-tagged, unlabeled p20 and were immunoprecipitated by using monoclonal, histidine tag-specific antibody and protein A-Sepharose. Negative controls in which p20 or monoclonal antibody were omitted are also shown. The arrows at the left mark the positions of corresponding BMV proteins, whereas the arrowheads within the autoradiograms mark the major translation products of the mRNAs that encode GUS, Hsp70h, N42, and C23 before or after immunoprecipitation.
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Hsp70h changes subcellular localization of p20. It was demonstrated previously that Hsp70h is associated with the plasmodesmata and virions in the BYV-infected cells (31, 32). We were interested to determine if p20 and Hsp70h possess autonomous signals that would target them to a specific cellular compartment and if coexpression of these proteins would result in their relocalization. To address these questions, we employed Agrobacterium-mediated, transient expression of p20 and Hsp70h fused with GFP. The GUS-GFP fusion was used as a control because neither GFP nor GUS possesses specific targeting signals (38).
The epifluorescent microscopy analyses revealed that both GUS-GFP and p20-GFP are uniformly distributed throughout the cortical cytoplasm, transvacuolar cytoplasmic strands, and perinuclear regions (Fig. 4). In contrast, Hsp70h-GFP formed punctate bodies that were aligned with the cell wall. These results indicated that p20 does not possess an autonomous targeting signal, whereas Hsp70h is targeted to the cell periphery.
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FIG. 4. In planta colocalization of p20 and Hsp70h, N42, or C23. The green color corresponds to the GFP fluorescence; the red spots represent the autofluorescent chloroplasts. Upper row, transient expression of the GUS-GFP, p20-GFP, and Hsp70h-GFP fusion products. GFP-GUS was used as a control product that is distributed uniformly throughout the cortical cytoplasm and cytoplasmic strands. Lower row, coexpression of GUS-GFP or p20-GFP fusion products with free Hsp70h, N42, or C23.
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p20 is a long-distance transport factor. What is the primary function of p20 in the BYV life cycle? Previous work demonstrated that p20 is dispensable for BYV replication (39) and is not essential for virus cell-to-cell movement, although it might have an accessory role in the latter process (2). The interaction of p20 with Hsp70h, which is one of the three BYV MPs (40), prompted us to revisit the role of p20 in cell-to-cell movement.
A previously characterized p20 mutant,
p20, was potentially capable of expressing C-terminal fragments of p20 (Fig. 5). It could not be excluded that this fragment was partially functional in the cell-to-cell movement of the corresponding mutant variant (2). Deletion of the RNA region encoding this fragment was impractical because it would inactivate a subgenomic promoter that governs expression of a replication-associated BYV protein, p21 (39). Consequently, we designed two additional point mutations by introducing premature stop codons in place of the 49th and 81st p20 codons. These mutants could direct the translation of only short, N-terminal p20 peptides (Fig. 5). Each mutation was introduced into GFP-tagged BYV, and the resulting mutant BYV-GFP variants were inoculated into the local lesion host plants (40). Examination of these mutants demonstrated that each of them was capable of cell-to-cell movement. The Stop-49 and Stop-81 mutants produced multicellular infection foci with mean diameters of 4.0 ± 2.3 and 2.1 ± 1.1 cells, respectively. The infection foci formed by the parental BYV-GFP variant had mean diameters of 5.1 ± 2.8 cells. These data confirmed our previous conclusion that p20 is not essential for the BYV cell-to-cell movement, although its inactivation results in a less efficient local spread.
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FIG. 5. Mutations introduced into the p20 ORF and systemic infectivity of the corresponding BYV-GFP variants. Gray rectangles represent the wild-type p20 ORF (upper diagram) or translatable parts of this ORF in the mutants. The parts of flanking CP and p21 ORFs are shown. Empty rectangles correspond to untranslatable parts in the mutant ORFs, whereas the broken lines mark the region that is deleted in the p20 variant. AUG, the 5'-most translation start sites in p20 ORFs. Stop-49 and Stop-81, mutants in which premature stop codons were introduced in place of the 49th or 81st codons in the p21 ORF. The plants were considered systemically infected if at least one green fluorescent area was detected in any of the noninoculated leaves.
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FIG. 6. Systemic transport and unloading of the BYV-GFP variants into the upper, noninoculated leaves of N. benthamiana. II and III, class II and III leaf veins. Images under the BYV-GFP heading show the progression of the virus-infected, green fluorescent areas in the leaves of plants inoculated with parental BYV-GFP from 1 to 8 w.p.i. Note that the infected cells appear first at 2 w.p.i. in the class III veins and spread throughout the leaf by 6 w.p.i. At 8 w.p.i., the leaves become necrotic and show only the residual fluorescence. The images under the heading p20 show that occasional virus unloading from class II veins is observed at 4 w.p.i., whereas limited secondary spread into class III veins is detected only by 6 w.p.i.
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p20, Stop-49, and Stop-81 mutants showed such fluorescent areas (Fig. 5 and 6). It was demonstrated recently that GFP expressed in the phloem companion cells of healthy transgenic plants is capable of trafficking through the phloem (35). To test whether the GFP accumulation observed in our experiments was due to BYV-GFP transport and amplification rather than to virus-independent trafficking of GFP, we isolated RNAs from the fluorescent tissues and conducted Northern hybridization and reverse transcription-PCR analyses. These analyses, followed by nucleotide sequencing, confirmed that the viral RNA harboring original mutations was present in the green fluorescent areas of the infected plants (data not shown). Thus, gross debilitation of systemic spread due to mutations in p20 allowed us to conclude that p20 plays a critical role in long-distance transport and represents a BYV LTF.
Analysis of virus unloading.
Previous work with GFP-tagged Potato virus X (PVX) established that long-distance transport results in virus unloading into class III veins of the sink leaves, with subsequent cell-to-cell movement into mesophyll cells and minor veins (42). To determine if BYV follows this pathway, we conducted temporal and spatial analyses of the infection by BYV-GFP and its mutant variants. Figure 6 shows that BYV-GFP in noninoculated leaves appears at 2 weeks postinoculation (w.p.i), while PVX-GFP in noninoculated leaves appears at
1 w.p.i. (42). Despite this slow spread, the pattern of BYV-GFP unloading matches that found in PVX-GFP: GFP accumulation is detected first in association with class III veins. At 6 w.p.i., virus egress into leaf mesophyll cells and subsequent cell-to-cell movement results in a global colonization of the leaf tissues.
The timing of virus unloading for
p20 mutant was dramatically different: the first fluorescent cells did not appear till 4 w.p.i. Furthermore, only sporadic unloading that involved preferentially class II veins was detected (Fig. 6). The subsequent local spread of virus from the sites of primary unloading indicated that mutant virus was capable of cell-to-cell movement. Hence, the timing, extent, and pattern of virus unloading were drastically affected in the
p20 mutant. These results reconfirmed that functional p20 is required for efficient passage of BYV through and/or unloading from the phloem of infected plants.
p20 is associated with the virions. Taking into account the ability of p20 to bind a virion-associated Hsp70h, we hypothesized that p20 functions in long-distance transport via attachment to the virions. To address this hypothesis, we used a p20-specific antiserum for the analysis of BYV virions separated in a sucrose gradient. As seen in Fig. 7A, p20 was confidently detected in the virion preparation. Moreover, p20 and CP peaked in the same fractions of the gradient (Fig. 7A and B) that were previously shown to contain intact, full-length BYV virions (32). These results showed that p20 is physically associated with the BYV virions.
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FIG. 7. Comigration of BYV p20 and virions in sucrose density gradient. (A) Immunoblot analysis of the gradient fractions (numbered from the bottom up) using antiserum to the synthetic, C-terminal p20 peptide. (B) The same gradient fractions separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and stained with Coomassie brilliant blue. The position of the BYV CP is marked by an arrow; the numbers at the left indicate molecular sizes of the protein markers.
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FIG. 8. Protein composition of the virions isolated from plants infected with parental and mutant BYV-GFP variants. Immunoblot analyses of the virions were done by using the specific antisera indicated at the right of each panel.
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In a previous work we developed the concept of a BYV virion as a morphologically and functionally bipartite entity (3). One principal part of the virion, the body made up of CP and RNA, carries the function of genome protection. The other part, the tail assembled by CPm, represents a specialized device for cell-to-cell movement. We have also demonstrated that one of the BYV MPs, Hsp70h, is an integral part of the virion (32) that is required for tail assembly (3). It was further hypothesized that the virion translocation through the plasmodesma occurs in a directional, tail-first manner and is powered by ATPase activity of Hsp70h. In this work we show that in addition to its central role in BYV cell-to-cell movement, Hsp70h provides a docking site for p20, an accessory virion protein that is critical for long-distance transport of the virus.
Initially, p20 was identified as the BYV protein that interacts with Hsp70h in yeast, in vitro, and in plant cells. Further experiments revealed that each of the principal domains of the Hsp70h was capable of binding p20. This observation suggests that each Hsp70h molecule can bind at least two p20 molecules. Alternatively, the interface between Hsp70h and p20 in a 1:1 complex may overlap each of the Hsp70h domains. Additional p20 molecules could be included in a complex via p20 self-interaction.
To address the significance of Hsp70h-p20 interaction, we investigated the p20 function in the BYV life cycle and revealed its primary role in the long-distance transport of BYV. Indeed, mutation of the p20 gene resulted in profound defects in a phloem-associated virus spread. First, the mutants were unable to spread systemically in a majority of inoculated plants. Second, in those few plants where systemic spread was detected, it was delayed by at least two weeks. Third, the extent and pattern of virus unloading were affected by mutations. Instead of the massive unloading from class III veins seen with parental BYV-GFP (Fig. 6) as well as with other viruses (42), mutant BYV-GFP variants exhibited patchy unloading from class III and/or class II veins. Taken together, these results established p20 as a BYV LTF.
Further analyses revealed that although p20 is not essential for virion assembly or cell-to-cell movement, it is attached to the virions, presumably via interaction with the BYV MP, Hsp70h. This association between virion, MP, and LTF suggests that the processes of the local and systemic translocation of BYV are mechanistically linked to each other via physical interaction between virion-associated MP and LTF. Furthermore, it prompts a novel paradigm of a BYV virion as a dynamic entity that mediates virus transport via recruitment of the MP and LTF.
It should be emphasized that the transport mechanisms may not be uniform among the viruses in the Closteroviridae family, as BYV is the only known closterovirus that is capable of exiting the phloem. On the other hand, interaction between the virions and MP was recently described for a Potexvirus, suggesting that recruitment of the transport proteins by virions could be a widespread phenomenon (4).
What is a mechanism of p20 function in long-distance transport of BYV? One possibility is that p20 facilitates either entry of virions into or exit from the phloem, e.g., via modification of the plasmodesmatal function of the Hsp70h. This modification may be required to account for the specialized nature of plasmodesmata that interconnect cells within phloem. Another possibility is stabilization of the virions inside the phloem. In particular, p20 may prevent the disassembly of the virions and damage of RNA due to alkaline pH of the phloem sap (33). Alternatively, p20 could protect virions from inactivation by plant defense proteins that are present in the phloem (11).
The third mechanistic possibility is involvement of p20 with suppression of plant RNA silencing response, which is a likely mechanism of action for several LTFs (1, 24). Our attempt to reveal such suppressor activity of p20 with a model system in which RNA silencing is induced by transient expression of the double-stranded RNA (22) was unsuccessful (J. Reed, K. Kasschau, J. Carrington, and V. V. Dolja, unpublished results). However, it cannot be excluded that p20 interferes with something other than the double-stranded-RNA-induced facet of the RNA silencing pathway.
Phylogenetically, p20 represents a novel class of viral LTFs. A database search revealed that p20 shows only marginal similarity to other
20-kDa proteins encoded by related members of the Closterovirus genus (V. V. Dolja, unpublished data). In general, none of the presently characterized LTFs exhibits sequence similarity to any other proteins except for their orthologs within the same virus taxon. Because of that, LTFs appear to be a relatively recent evolutionary invention that may provide valuable mechanistic clues as to virus-host interactions within the phloem.
This work was supported by grants from the National Institutes of Health (R1GM53190B), from the U.S. Department of Agriculture (CSREES 2001-35319-10875), and from the Large Scale Biology Corporation (2000-13) to V.V.D.
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