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Journal of Virology, September 2002, p. 8596-8608, Vol. 76, No. 17
0022-538X/02/$04.00+0 DOI: 10.1128/JVI.76.17.8596-8608.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Receptor Homologs
Christine Benz,2 Martin Messerle,2,1 and Hartmut Hengel1*
Robert Koch-Institut, Fachgebiet Virale Infektionen, 13353 Berlin,1 Max von Pettenkofer-Institut, Lehrstuhl Virologie, 81377 München, Germany2
Received 16 April 2002/ Accepted 5 June 2002
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Rs) comprise a family of surface receptors on immune cells connecting humoral and cellular immune responses. Several herpesviruses induce Fc
R activities in infected cells. Here we identify two distinct human cytomegalovirus (HCMV)-encoded vFc
R glycoproteins of 34 and 68 kDa. A panel of HCMV strains exhibited a slight molecular microheterogeneity between Fc
-binding proteins, suggesting their viral origin. To locate the responsible genes within the HCMV genome, a large set of targeted HCMV deletion mutants was constructed. The mutant analysis allowed the identification of a spliced UL119-UL118 mRNA to encode vFc
R gp68 and TRL11/IRL11 to encode vFc
R gp34. Both vFc
Rs are surface resident type I transmembrane glycoproteins. Significant relatedness of sequences in the extracellular chain of gpUL119-118 and gpTRL11 with particular immunoglobulin supergene family domains present in Fc
R I and Fc
Rs II/III, respectively, indicates a different ancestry and function of gpUL119-118 and gpTRL11. The HCMV-encoded vFc
Rs highlight an impressive diversification and redundancy of Fc
R structures. |
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The Fc portion of immunoglobulins (Ig) plays a central role during immune responses and forms a well-characterized structure (29). Multiple components of the immune system interact with Fc via distinct binding sites, which include complement, the neonatal Fc receptor transferring maternal IgG to the fetus, and cellular immune receptors (cellular FcRs). FcRs belong to the immunoglobulin supergene family (IgSF) and constitute a group of cell-surface molecules that are expressed on most cells of the immune system. By linking cell-mediated and humoral immune responses, FcRs play a key role in host defenses against pathogens (57). Three classes of cellular FcRs (Fc
R) for IgG are known which exhibit homologies in their extracellular IgG-binding chain forming IgSF domains. Fc
RI has a high level of affinity for monomeric IgG, whereas Fc
RII and Fc
RIII exhibit lower levels of affinity for monomeric IgG but bind IgG-containing immune complexes with high avidity. The cross-linking of Fc
RI-bound antibodies by multivalent antigens, or the binding of preformed immune complexes with Fc
RII or Fc
RIII, results in clustering of the Fc
R and triggers a variety of effector mechanisms, such as antibody-dependent cellular cytotoxicity (ADCC), phagocytosis, the release of cytokines, enhanced antigen presentation, and the regulation of Ig production (1, 57).
Microbial Ig binding proteins, such as protein A from Staphylococcus aureus and streptococcal protein G, mask the bacteria through immobilized Ig on their surface and modify opsonization, phagocytosis, and complement consumption (38). Coronaviruses (52) and certain herpesviruses, such as herpes simplex virus type I (HSV-1) (3, 53), HSV-2 (10), varicella zoster virus (51), and murine cytomegalovirus (MCMV) (63), produce molecules with Fc
R activity. The HSV-encoded vFc
R is formed by a protein complex composed of two type I transmembrane glycoproteins, gE and gI, which are part of the virion structure (32). gE was identified as the IgG-binding protein of HSV-1 but requires association with gI to enhance IgG binding activity (31). This prevents antiviral IgG from neutralizing free virus (16) and engaging in ADCC against HSV-infected cells (18), a mechanism explained by bipolar bridging of specific IgG (20). Other functions of the gE-gI heterodimer are associated with direct cell-to-cell spread of the virus (14, 15). In MCMV-infected cells a vFc
R is encoded by the early gene m138, which has no homolog in the HCMV AD169 sequence (63). The deletion of m138 did not impair viral replication in vitro but resulted in a drastically attenuated phenotype in vivo (11).
Over the last 25 years, several laboratories have reported on Fc binding activities in HCMV-infected cells (21, 22, 36, 58). Biochemical characterization of Fc-binding proteins (FcBPs) in HCMV-infected fibroblasts led to conflicting results, and a viral protein mediating this effect has not yet been identified (48, 62, 67). Alternatively, induction of a cFc
R could account for this effect, although antibodies specific for known cFc
Rs did not stain HCMV-infected cells (43).
Here we report on the identification of two HCMV AD169-encoded glycoproteins, designated gpUL119-118 and gpTRL11, which share constitutive capabilities of Fc
R, i.e., Fc-dependent binding of nonimmune human IgG and migration along the secretory pathway to the cell surface. To search for the viral genes coding for vFc
Rs, we pursued a genomic approach and constructed a panel of HCMV AD169 deletion mutants lacking gene regions predicted to encode glycoproteins. This led to the identification of the viral gene UL119-118 coding for gp68 and confirmed that TRL11/IRL11 expresses gp34 as reported recently (41). While the overall sequence homology of vFc
Rs with cFc
Rs is moderate, their structural composition, the formation of IgSF-like domains, and the positional conservation of amino acid residues within the extraluminal part of the molecules are consistently preserved in both of the CMV-encoded homologs. On the other hand, the virally encoded homologs indicate an unforeseen plasticity of Fc
R structures.
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Viruses, infection conditions, and virus titration. Virus stocks were prepared by propagating HCMV strains AD169, Toledo, Towne, clinical isolates, and the mutant ts9 (46) in MRC5 cells as described previously (27). Infectious supernatants were harvested when 100% of cells showed cytopathic effects. Virus titers were determined by standard plaque assay. HCMV infection was enhanced by centrifugation at 800 x g for 30 min. In all experiments MRC5 cells were infected with HCMV at a multiplicity of infection of 3 to 5. Selective expression of HCMV IE gene products was achieved as described previously (27). Briefly, infection of cells was performed in the presence of cycloheximide (CHX) (50 µg/ml), which was replaced 4 h later by actinomycin D (ActD) (5 µg/ml). Late phase gene expression was prevented by the use of phosphonoacetic acid (PAA) (250 µg/ml), which arrests CMV-infected cells in the E phase.
Reagents and antibodies. The following antibodies were used: Fc and F(ab)2 fragments of human IgG (huIgG) (Biotrend, Köln, Germany), complete huIgG (Biotrend), fluorescein isothiocyanate-conjugated Fc fragment of huIgG (huIgG Fc-FITC) (Biotrend), anti-human influenza virus hemagglutinin (HA) epitope-specific rat monoclonal antibody (MAb) 3F10 (Roche, Mannheim, Germany), and anti-FLAG M2 (Sigma, Munich, Germany). Human ß2-microglobulin (ß2m), huIgG, and Fc and F(ab)2 fragments of huIgG were coupled to cyanogen bromide-activated Sepharose 6MB (Amersham-Pharmacia, Freiburg, Germany) according to the manufacturer's instructions.
Metabolic labeling and precipitation of FcBPs. Precipitation of proteins from lysates of metabolically labeled cells was performed essentially as described previously (27). In brief, MRC5 cells were infected with HCMV for various time periods. Cells were starved in cysteine- and methionine-free medium prior to labeling with [35S]methionine and [35S]cysteine (1,200 Ci/mmol) (Amersham-Pharmacia) at a concentration of 500 µCi/ml. After 1 h, cells were washed and lysed in lysis buffer (140 mM NaCl, 20 mM Tris [pH 7.6], 5 mM MgCl2, 1 mM phenylmethylsulfonylfluoride, 0.1 mM leupeptin, 1 µM pepstatin A) with 1% NP-40 (Sigma). The incorporation of 35S into proteins was quantified in all experiments by liquid scintillation counting. After removal of cell nuclei by centrifugation, lysates were incubated with huIgG Fc and protein A-Sepharose (Amersham Pharmacia). Digestion of proteins with 2 mU of Endo H (Roche) per sample was performed at 37°C overnight according to the instructions of the manufacturer. Proteins were eluted with sample buffer and analyzed by sodium dodecyl sulfate (SDS)-11.5 to 15% polyacrylamide gel electrophoresis (PAGE). Dried gels were exposed to Kodak BioMaxMR films at -70°C for 1 to 5 days.
Flow cytometry.
To analyze vFc
R surface expression, CV1 cells were infected with vaccinia virus recombinants at a multiplicity of infection (MOI) of 3 and incubated overnight. After washing, cells were incubated for 30 min at 4°C with 10 µg of huIgGFc-FITC/ml before being harvested with cell dissociation solution (Sigma). A total of 104 cells was analyzed for each histogram using a FACScan (Becton Dickinson, Heidelberg, Germany).
Plasmids. p7.5kUL119-118FLAG was generated in two steps using PCR amplification products. First, UL119 was amplified from the HCMV bacterial artificial chromosome (BAC) plasmid pHB5 (4) using the primer pair az-UL119-1 (5'GACTTAGATCTACATGTGTTCCGTACTGGCG-3') and az-UL119-5 (5'GAGATGAAGCTTACCTTCATTATCGGG-3'). The PCR fragment was digested by BglII and HindIII (indicated by italics) and cloned into the BamHI and HindIII sites of vector p7.5k (28), resulting in plasmid p7.5kUL119. A second PCR fragment was generated using primer az-UL119-6 (5'GGAAAGCTTCATCTCTCCTACAACGCTACT-3') and az-UL119F1 (5'AAGAATTCTACTTGTCGTCGTCGTCCTTGTAGTCAGCAGCCCACTGCTTGAAGTAGGGCACCG-3') encoding a FLAG epitope from the underlined sequence. The PCR product was treated with HindIII and EcoRI and cloned into the respective sites of p7.5kUL119, resulting in p7.5kUL119-118FLAG. The IRL/TRL11 open reading frame (ORF) was amplified from pHB5 using the primers az-irl11-1 (5'GCTTAGGGATCCATGCAGACCTACAGCACCCC-3') and az-irl11-F1 (5'GCTTAAGATATCCTACTTGTCGTCGTCGTCCTTGTAGTCCTGTAAATCCCCGTCCACCG-3'). Primer az-irl-11-1 contains a BamHI restriction site (shown in italics), and az-irl11-F1 contains the coding sequence for the FLAG epitope and an EcoRV site (underlined). The PCR fragment was cloned into p7.5k via the BamHI and EcoRV sites. Correct insertion of HCMV coding sequences and FLAG epitopes was confirmed by sequencing.
BAC mutagenesis.
Recombinant CMV genomes were generated in Escherichia coli using a recently established new method that relies on homologous recombination of a linear PCR fragment with the CMV BAC plasmid (65). For construction of mutant BAC plasmids containing extended deletions, PCR products were used that were generated with primers which contained homologies of 60 bp upstream or downstream of the positions of the deleted ORFs. The 3' ends of the primers had the sequence 5'CGATTTATTCAACAAAGCCACG-3' in the case of the upstream primers and 5'GCCAGTGTTACAACCAATTAACC-3' in the case of the downstream primers. The primer pairs were used to amplify the Knr gene from plasmid pACYC177 (New England Biolabs, Frankfurt/Main, Germany). The resulting PCR products contained the Knr gene flanked by homologies of 60 bp upstream and downstream of the respective target sequences. After purification, this PCR fragment was inserted into pHB5 by homologous recombination in E. coli which was mediated by the recombination plasmid pBAD
ß
(69) leading to simultaneous deletion of the respective target genes. Correct mutagenesis was confirmed by restriction pattern analysis and by PCR analysis using an internal primer pair within the deleted sequences. Double mutants were constructed using primer pairs containing 60-bp homologous sequences as described above, followed by the sequences 5'CCAGTGAATTCGAGCTCGGTAC-3' for upstream primers and 5'GACCATGATTACGCCAAGCTCC-3' for downstream primers and the plasmid pCP16 (9) encoding a tetracycline resistance gene as the template. The resulting PCR fragment was inserted into pHB5-
IRL as described above. Plasmid pSLFRTKn, which was used as the template for PCR-based BAC mutagenesis, was generated as follows: the kanamycin resistance gene and its promoter (Knr) from the plasmid pACYC177 (New England Biolabs) were amplified by PCR using the contiguous primer pair EcoRI-FRT-Kn-3 (5'CACCGAATTCGAAGTTCCTATACTTTCTAGAGAATAGGAACTTCGCCAGTGTTACAACCAATTAACC-3') and EcoRI-FRT-Kn-5 (5'CCGAATTCGACTACAAGGACGACGACGACAAGTAAGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCCGATTTATTCAA-3'). Besides the priming region specific for the Knr gene in pACYC177, both primers contain a minimal 34-bp FRT site in the same orientation (underlined sequences) and an EcoRI site. The PCR fragment was inserted into the EcoRI site of plasmid pSL301 (Invitrogen, Karlsruhe, Germany), generating plasmid pSLFRTKn, which thus contains the Knr gene flanked by minimal FRT sites. Mutated BAC plasmids were transfected into MRC5 fibroblasts, and DNA of reconstituted virus mutants was analyzed in parallel with BAC plasmid DNA by Southern blotting and PCR to prove the correct deletions of DNA sequences. For construction of an HCMV genome with a 3'-terminal addition of the HA-tag sequence to the UL118 ORF, a PCR fragment was generated using the plasmid pSLFRTKn as template DNA and the contiguous primers 5'-UL118-HA (5'-GTCAGCGAAATAAAGACAACACAGCAGCCACTCCTCTCGTCTCGGGCCCGTCGTGGAATGCCTTCGAATTC-3') and 3'-UL118-HA (5'-CCCGTTGAGGAAAAGAAACACCCGGTGCCCTACTTCAAGCAGTGGTACCCATACGATGTTCCAGATTACGCGTAGACAAGGACGACGACGACAAGTAA-3 (the HA sequence is underlined). The resulting PCR fragments contained the Knr gene (flanked by minimal FRT sites), next to Knr the HA sequence plus a stop codon, and finally, on both ends, homologies of about 50 bp upstream and downstream to the native stop codon of the UL118 ORF within pHB5. After purification and DpnI digestion (65), this PCR fragment was inserted into pHB5 by homologous recombination in E. coli, which led to simultaneous deletion of the native UL118 stop codon and to generation of the HCMV BAC plasmid pUL118Kn-HA with a HA fusion to UL118. The Knr downstream of the tagged gene was excised from pUL118-HA via the flanking FRT sites by Flp-mediated recombination as described previously (65), generating the HCMV BAC plasmid pUL118-HA. Correct mutagenesis was confirmed by restriction pattern analysis and sequencing of the 3'-terminal part of the tagged gene.
Generation of HCMV recombinants. Recombinant HCMV was reconstituted from mutant HCMV BAC plasmids as described previously (4).
Viral nucleic acid isolation and analysis.
DNA from cells infected with recombinant HCMV was isolated and analyzed as described previously (4). For analysis of the UL119-115 transcription unit, total RNA was purified 120 h postinfection (p.i.) from cells infected with HB5 or HB5-
UL118-120 by using the RNeasy kit (Qiagen, Hilden, Germany) following the manufacturer's instructions. RNA was reverse transcribed using Superscript reverse transcriptase (Gibco BRL, Karlsruhe, Germany) and a random hexanucleotide primer mix (Roche) for 1 h at 45°C. First strands from this reaction were used as the template for PCRs using primer az-UL119-1 (5'GACTTAGATCTACATGTGTTCCGTACTGGCG-3') containing a BglII restriction site as the forward primer and primers az-UL118-2 (5'-GGCATTGCATGCTACCACTGCTTGAAGTA-3'), az-UL117-1 (5'-TCCAAGCATGCTCAT GAGGTGGGCAGGCG-3'), and UL116-1 (5'-GTTCCGCATGCTCAAGTCTGCGGCACGAT-3'), respectively, all containing an SphI site as backward primers. PCR products were subcloned via the BglII und SphI sites into either the pUC19 or the p7.5K131 vector and subjected to sequence analysis.
Generation of vaccinia virus recombinants. Vaccinia virus recombinants were constructed as described previously (28). Briefly, p7.5K131 constructs were used to generate vaccinia virus recombinants after homologous recombination with the vaccinia virus strain Copenhagen. The recombinant vaccinia viruses expressing the gene of interest were isolated by selection with BrdU using tk-143 cells.
Nucleotide sequence accession number. The GenBank accession number for the UL119-118 nucleotide sequence reported in this article is AY065993.
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binding proteins did not bind human IgA or human IgM, they strongly bound huIgG of the subclasses IgG1, IgG2, IgG3, and IgG4 (Table 1). However, the FcBPs clearly differed in their specificity for IgG of different mammal species (Table 1).
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FIG. 1. Precipitation of FcBPs from HCMV AD169-infected cells. Cells were labeled with [35S]methionine at 72 h p.i. for 1 h. The precipitation from lysates was done with Sepharose covalently coupled with complete nonimmune huIgG, Fc fragments of huIgG, F(ab)2 fragments of huIgG, and ß2m. Proteins were separated by SDS-11.5 to 15% PAGE. FcBPs gp34 and gp68 are indicated by arrowheads.
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TABLE 1. Ig binding specifity of the Fc-binding proteins gp34 and gp68a
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binding glycoproteins of 34 and 68 kDa were synthesized under E and L phase conditions.
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FIG. 2. Expression kinetics of FcBPs during the HCMV replication cycle. (A) MRC5 cells were infected with HCMV strain AD169 at an MOI of 3 for the times indicated. Cell lysates were precipitated with Fc fragments of huIgG, and precipitates were separated by 11.5-to-15%-gradient SDS-PAGE. FcBPs gp34 and gp68 are indicated by arrowheads. (B) Selective and enhanced synthesis of HCMV IE proteins was used by infecting cells in the presence of CHX, which was replaced by ActD (act.D), as described in Materials and Methods. PAA was used as an inhibitor of late phase gene expression.
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FIG. 3. Expression of FcBPs in HCMV strains and clinical isolates. MRC5 cells were infected at an MOI of 3 for 72 h with HCMV laboratory strains and the clinical isolate UL1271. Cells were metabolically labeled with [35S]methionine, and proteins from lysates were precipitated with Fc fragments and protein A Sepharose. Before separation of proteins by SDS-11.5 to 15% PAGE, an aliquot of each precipitate was deglycosylated with Endo H. FcBPs and their deglycosylated products are indicated (gp68 and p33 by asterisks; gp34 and p24 by arrows).
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binding activity has been detected on the cell surfaces of HCMV-infected fibroblasts, but MAbs specific for Fc
RI, Fc
RII, and Fc
RIII did not stain infected cells (R. Atalay and H. Hengel, unpublished data) (43). This suggested that either viral proteins account for the Fc
binding activity observed or HCMV induces other members of the diverse families of cellular FcR molecules, two of which have been reported very recently (12, 25, 59). A number of HCMV proteins have been demonstrated to exhibit subtle electrophoretic differences between HCMV strains. To compare FcBPs between HCMV laboratory strains and clinical isolates, fibroblasts were infected with a panel of viruses and metabolically labeled proteins were subjected to Fc-dependent precipitation. Before separation of proteins by SDS-PAGE, an aliquot of precipitated material was deglycosylated with Endo H. Comparative analysis revealed that proteins similar to gp34 and their deglycosylated product p24 of AD169 were present in all HCMV strains and isolates tested (Fig. 3). The same result was observed for gp68. However, subtle differences in the electrophoretic mobilities were observed, e.g., the gp34 FcBP of AD169 migrated in HCMV Toledo-infected cells at 37 kDa, compatible with the presence of a further site for N-linked glycosylation. Likewise, the deglycosylated product of gp68 in cells infected with the clinical isolate UL1271 migrated slightly more slowly compared to p33 in AD169-infected cells. Thus, the biochemical data suggest that the expression of FcBPs is conserved between HCMV strains. The observed microheterogeneity between FcBPs supported the notion that the factors are encoded by HCMV itself rather than being due to HCMV-induced cellular gene expression.
Construction and analysis of FcBP expression in AD169 deletion mutants.
Based on the size of deglycosylated proteins and the estimated number of N-linked glycosylation sites, multiple ORFs predicted for the AD169 genome could represent possible gene candidates. In addition to the gene products predicted from the sequence, several AD169-encoded glycoproteins have been identified (37, 47). Based on this rationale, a genetic approach was followed to identify genes coding for FcBPs. A panel of recombinant HCMV mutants with targeted deletions in gene regions predicted to encode glycoproteins was constructed (Table 2). Altogether, 52 predicted ORFs encompassing 39,795 bp were deleted by homologous recombination of the HCMV AD169-derived infectious BAC pHB5 in E. coli (4). Analysis of replication kinetics demonstrated efficient growth of mutant viruses in human fibroblasts (unpublished data). Deletion mutants were screened for a loss of FcBP expression by Fc precipitation of lysates and SDS-PAGE. When fibroblasts were infected with a mutant lacking the genes UL118-120, a complete loss of gp68 expression was observed, while synthesis of the gp34 FcBP was maintained (Fig. 4A). This finding located the genomic region required for gp68 expression to involve the ORFs UL118-120 of the unique long component of the AD169 genome. Cells infected with the deletion mutants listed in Table 2 expressed gp34 FcBP, indicating that the responsible gene does not reside within one of these gene regions. The AD169 IRL (internal repeat, long segment) gene region represents a duplication of the TRL (terminal repeat, long segment) ORFs TRL1 through TRL14 (8) and includes several predicted glycoprotein genes. Therefore, a further deletion of the TRL10-14 ORFs was introduced into the deletion mutant
IRL, resulting in the deletion mutant
TRL10-14/IRL lacking 16,278 bp. When this mutant was analyzed, a loss of gp34 synthesis was noted (Fig. 4B), pointing to the ORF TRL11/IRL11 as a likely candidate gene which was predicted to encode a polypeptide with properties similar to that of the gp34 FcBP. In summary, the analysis of HCMV deletion mutants confirmed the expression of two independent FcBPs, gp34 and gp68, by HCMV AD169. The gene encoding gp68 was located within the region UL118-120, and the gene encoding gp34 was located within TRL10-14. Moreover, for the first time it was formally demonstrated that the genomic regions encompassing UL1-14, UL14-20, UL40-42, UL118-120, UL128-132, IRL, and TRL10-14 are dispensable for HCMV replication in vitro.
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TABLE 2. Expression of Fc R homologs by HCMV ts9- and pHB5-derived deletion mutantsa
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FIG. 4. Analysis of FcBPs in HCMV pHB5-derived deletions mutants. (A) MRC5 fibroblasts were infected with HCMV deletion mutants for 72 h, labeled with [35S]methionine, and lysed. Lysates were precipitated with Fc fragments and protein A Sepharose before analysis by SDS-11.5 to 15% PAGE. (B) MRC5 cells were infected with TRL10-14/IRL for 72 h, labeled with [35S]methionine, and lysed. Precipitation of lysates was performed with Fc fragments and protein A Sepharose. Precipitates were digested with Endo H before analysis by SDS-11.5 to 15% PAGE.
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R gp68.
The UL115-119 transcription unit represents a genomic region of high complexity, giving rise to a 4.2-kb RNA precursor undergoing multiple differential splicing events (39). Based on the predicted molecular weight and the number of N-linked glycosylation sites, neither the ORFs UL120, UL119, and UL118, the expression of which is affected in the
UL118-120 mutant, nor any of the three hypothetical proteins derived from the UL115-119 transcription unit is compatible with the observed properties of FcBP gp68. To narrow the gene sequences responsible for expression of gp68, a further set of pHB5-derived deletion plasmids was constructed, and reconstituted HCMV mutants were analyzed (Fig. 5). As expected, the mutant
UL116-UL120 did not express gp68. Mutants with deletions of UL118 and the 5' part of UL117 had lost FcBP gp68 synthesis. In contrast, expression was maintained in
UL120 and in deletion mutants lacking the 3' part of UL117 and the coding sequence of UL116 (Fig. 5). These data indicated that the ORFs UL119 and UL118 were required to express gp68. Hence, we postulated that the UL119-115 transcription unit could give rise to a further, as yet unidentified spliced transcript of 4.1 kb (Fig. 5). To test this hypothesis, cDNAs of spliced transcripts derived from the common 4.2-kb mRNA precursor encompassing intron 1 and intron 2 were amplified by reverse transcription-PCR. As a control, amplification of cDNA derived from RNA of
UL118-120-infected cells was negative. Sequence analysis of two cloned cDNAs derived from AD169-infected cells identified fairly similar exon-intron boundaries as predicted by Leatham et al., i.e., intron 1 spanning from bp 423 to 511 and intron 2 spanning from bp 932 to 1989 downstream from the UL119 start ATG. As presumed, two cDNA populations were found, including one which connected the UL119 and UL118 ORFs by excision of intron 1, thus coding for a predicted glycoprotein of 33 kDa compatible with FcBP gp68. In the other cDNA introns 1 and 2 were excised, corresponding to the transcript described previously (39). To test the Fc-binding function of both gene products, recombinant vaccinia viruses containing both genes were constructed, vacUL119-118 and vacUL119-117. Precipitation of proteins from the lysate of cells infected with vacUL119-118 using Fc fragments and Protein A Sepharose revealed the presence of a FcBP of 68 kDa with N-linked glycans identical to the FcBP gp68 precipitated from a lysate of AD169-infected cells (Fig. 6A). In contrast, no FcBP was detected in vaccUL119-117-infected cells (A. Zimmermann, R. Atalay, and H. Hengel, unpublished data). As demonstrated by cytofluorometric analysis, Fc fragments strongly decorated the cell surface of vacUL119-118-infected cells, confirming cell surface exposition of the vFc
R gp68 (Fig. 6B). To confirm that the C terminus of vFc
R gp68 is encoded within the UL118 ORF in the context of the HCMV genome, an influenza virus HA epitope tag was inserted into the pHB5 BAC sequence just in front of the native stop codon of the UL118 ORF. After reconstitution of the UL118-HA-tagged virus, biochemical analysis revealed correct features of the HA-bearing vFc
R gp68 (R. Atalay, M. Wagner, and H., Hengel, unpublished data). In conclusion, the data identified a new spliced UL119-118 transcript from the UL119-115 transcription unit of HCMV to encode the vFc
R gp68, designated gpUL119-118.
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FIG. 5. Identification of the transcription unit coding for FcBP gp68 within the HCMV UL120-UL116 gene region. The prototype arrangement of the viral genome consisting of long (UL) and short (US) unique components bounded by terminal repeats (TR) and inverted internal repeats (IR) as well as the position and the direction of transcription of the UL120-UL116 genes are indicated at the top panel. Below, open boxes designate the UL120-UL116 ORFs. The region contains three possible start ATGs indicated by arrows and two possible intron sequences. The mRNAs derived from the 4.2-kb mRNA precursor transcribed from the UL119 promoter are shown as lines interrupted by thin lines indicating splicing events. The positions of deletion mutants within the UL120-UL116 genomic region is given by boxes at the bottom. +, presence of vFc R gp68 synthesis in cells infected with HCMV deletion mutants; -, absence of vFc R gp68 synthesis.
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FIG. 6. Expression of vFc R gp68 by vacUL119-118. CV1 cells were infected at an MOI of 3 for 14 h. (A) After labeling with [35S]methionine was done, precipitation of proteins was performed with Fc fragments and protein A Sepharose. Precipitates were digested with Endo H and analyzed by SDS-11.5 to 15% PAGE. (B) Cells were stained with huIgGFc-FITC, harvested using cell dissociation solution, and analyzed by flow cytometry. Thin line, CV1 cells mock infected; dotted line, wild-type vaccinia-infected cells, bold line, cells infected with vacUL119-118.
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R gp34.
The loss of FcBP gp34 expression in
TRL10-14/IRL-infected cells located the responsible gene to the TRL10-14 ORFs. Among those ORFs, the product of TRL11 closely matches the biochemical properties of gp34 in terms of molecular size and number of glycosylation sites. Therefore, the TRL11 sequence was amplified from pHB5 DNA by PCR and cloned into the p7.5K vector, followed by the construction of a vaccinia virus recombinant expressing the TRL11-FLAG sequence. Proteins with FcBP properties were precipitated with Fc fragments from vacTRL11-infected cells, which migrated slightly more slowly than gp34 of HCMV AD169 (Fig. 7A). In addition, immunoprecipitation with an anti-FLAG MAb retrieved a glycoprotein of 34 kDa from the lysate of vacTRL11-infected cells (unpublished data). Endo H digestion of gp34 resulted in a single deglycosylated protein with a mass of 24 kDa, as seen in AD169-infected cells (Fig. 7A). Cytofluorometric analysis of cells infected with vacTRL11 exhibited greater Fc
-binding activity on the cell surface than control cells (Fig. 7B). In agreement with recently published information (41), our data prove that the TRL11 ORF and its identical copy, IRL11, encode the gp34 vFc
R, designated gpTRL11.
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FIG. 7. Expression of vFc R gp34 by vacTRL11. CV1 cells were infected at an MOI of 3 for 14 h. (A) After labeling with [35S]methionine was done, precipitation of proteins was performed with Fc fragments and protein A Sepharose. Precipitates were digested with Endo H digestion before analysis by SDS-11.5 to 15% PAGE. (B) Cells were stained with huIgGFc-FITC, harvested using cell dissociation solution, and analyzed by flow cytometry. Thin line, CV1 cells mock infected; dotted line, wild-type vaccinia-infected cells; bold line, cells infected with vacTRL11.
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Rs and alignment with cFc
R sequences.
The spliced UL119-118 gene encodes a predicted 347-amino-acid (aa) type Ia transmembrane protein with 12 potential N-glycosylation sites. The predicted signal sequence comprises aa 1 to 25 and the transmembrane region aa 294 to 314 (Fig. 8A ). A potential intracytoplasmic immunoreceptor tyrosine-based-like inhibition motif (consensus sequence I/V/L/SxYxxL) has been noted (57). Likewise, the TRL11 sequence is predicted to encode a 234-aa type Ia transmembrane glycoprotein with three potential N-linked glycosylation sites, a transmembrane sequence of 21 aa, and a cytoplasmic region of 31 aa (Fig. 8B). The cytoplasmic tail contains a dileucine consensus motif (DXXXLL, where X is unknown) indicating a potential function in intracellular targeting of the protein to the endocytic route (40).
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FIG. 8. Sequence analysis and alignment of gpUL119-118 and gpTRL11/IRL11. The deduced amino acid sequences of the UL119-118 ORF (A) and the TRL11/IRL11 ORF (B) are shown. The putative signal peptides are shown in italics, the putative transmembrane regions are underlined, and N-glycosylation sites are given in bold. The boxes indicate the putative IgSF domains of gpUL119-118 and gpTRL11. Putative cytoplasmic signaling motifs are in bold and underlined, i.e., a potential tyrosine-based motif in gpUL119-118 and an internalization motif for gpTRL11. Sequence alignments were performed by the program MacVector 7.02r using the ClustalW method with a PAM350 similarity matrix. For detailed analysis, the gpUL119-118 IgSF-like domain (aa 91 to 190) was aligned with the third domain of human Fc RI (aa 191 to 282; GenBank accession number X14356). (C) Amino acid residues are represented by the one-letter code, with dashes indicating gaps in the alignments. Identical residues are shaded in dark grey; residues showing similarity, defined as acidic (D or E), basic (H, K, or R), hydrophobic (A, F, I, L, M, P, V, or W) or polar (C, G, N, Q, S, T, or Y) are shaded in light grey. The N-glycosylation sites are boxed in black. The V-like consensus sequence (56) is shown above the alignment (+ represents a basic residue; represents a hydrophobic residue). Residues fitting the consensus are boxed in dark grey. The arrows above the sequence indicate the putative ß-sheets deduced from the crystal structure of Fc RII (60). (D) A phylogenetic tree was generated by alignment of the IgSF-like domains of gpUL119-118 (aa 91 to 190) and gpTRL (aa 24 to 122) with the Fc-binding second domains of human Fc RI (aa 102 to 187; GenBank accession no. X14356), Fc RII (aa 121 to 207; accession no. M31932), and Fc RIII (aa 106 to 192; accession no. X16863), the third domain of human Fc RI (aa 191 to 282), and different domains of two human cellular Fc receptor homologs (12), FcRH2 (GenBank accession no. AY043465) domains 1 (aa 17 to 103) and 2 (aa 110 to 198), as well as FcRH5 (accession no. AF397453) domains 2 (aa 102 to 187), 3 (aa 193 to 282), and 4 (aa 288 to 377). Alignment of the TRL11 IgSF-like domain (aa 24 to 122) with the Fc-binding second domains of human Fc RI (aa 102 to 187; GenBank accession number X14356), Fc RII (aa 121 to 207; accession number M31932), and Fc RIII (aa 106 to 192; accession number X16863) is shown (E). The arrows above the sequence indicate the ß-sheet structure of Fc RII/III based on crystal structure analysis (60, 68). The boxes indicate the contact regions for the two Fc-chains of huIgG (C 2-A and C 2-B) as determined by crystal structure analysis (61).
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binding property and plasma membrane expression link HCMV-encoded vFc
Rs with cFc
Rs, i.e., Fc
RI, which is the high-affinity receptor for monomeric IgG, and Fc
RII and Fc
RIII, which are low-affinity receptors binding aggregated IgG (57). The extracellular chains of Fc
RII and Fc
RIII consist of two IgSF-like domains arranged in tandem, while that of Fc
RI comprises three IgSF-like domains. IgSF domains are characterized by a structural motif termed the immunoglobulin fold (66). This feature is a specialized ß-barrel of polypeptide strands, forming antiparallel ß-pleated sheets. Each Ig domain is composed of two ß-pleated sheets, one containing four ß strands, the other consisting of at least three ß strands. Loops of variable length connect the different strands. Stability is provided by a disulfide bond near the domain's core, covalently linking the two sheet layers. Ig domains are divided into several sets according to the sequence and folding topology. IgSF domains of cFc
Rs share features of the C2 set and I set of Ig domains and are structurally related to killer cell Ig-like receptors (13). The binding of Fc is mediated by the membrane-proximal second IgSF domain of cFc
Rs (61), while the membrane-proximal third domain of Fc
RI is required to achieve high-affinity binding of IgG (30). To identify potential common features in sequence and structure, the predicted amino acid sequence of gpUL119-118 and gpTRL11 was used to identify sequences homologous to human cFc
Rs. The sequences of vFc
Rs and cFc
Rs, aligned by the program MacVector, revealed significant homology between the extracellular domains of gpUL119-118 and gpTRL11 molecules, respectively, and cFc
Rs. Specifically, a single IgSF-like domain each present in both vFc
Rs was aligned with IgSF domains of cFc
Rs. The potential IgSF-like domains of the vFc
Rs fulfill the criteria for IgSF domains (66) in that domain-sized sequences are present which include a conserved disulfide bond, they share similarity to Ig-related domains, and they are likely to share key structural features of the Ig-fold. The IgSF-like domain identified in gpUL119-118 ranging from aa 91 to 190 is in good agreement with the V-like domain consensus sequence (56), including a conserved disulfide bond between ß strand B and F, while sequences of the loop residues varied considerably (Fig. 8C). The gpUL119-118 IgSF domain showed its highest degree of homology to the third domain of Fc
RI (20% aa identity, 31% aa similarity) (Fig. 8D), including conserved N-glycosylation sites. This degree of relatedness is in a similar range as found for homologous cFc
R domains (e.g., second domains of Fc
RII and Fc
RIII, which have 39% identity and 14% similarity) and heterologous cFc
R domains (e.g., the third domain of Fc
RI and the second domain of Fc
RII, which share 15% identity and 17% similarity). In contrast, sequence relatedness of gpUL119-118 with the second domain of Fc
RII/III and particularly with the IgSF-like domain of gpTRL11 is clearly at a lower level (12% identity, 18% similarity; 7% identity, 17% similarity, respectively).
Alignment of the gpTRL11 IgSF-like domain (aa 24 to 122) revealed the second domain of Fc
RIII as the closest cellular homolog (12% identity, 27% similarity) (Fig. 8D), including one conserved N-glycosylation site. The three-dimensional crystal structures of the extracellular part of Fc
RIII (68) as well as of the IgG-Fc
RIII complex (61) have been determined. Alignment of the gpTRL11 IgSF-like domain with the respective second domains of cFc
Rs is shown in Fig. 8E. Sequence comparison of gpTRL11 residing at equivalent positions with those forming the three main contact areas between Fc
RIII and Fc revealed a good agreement concerning the interface with the second Fc chain (C2
-B) within the C/C' region (Fig. 8E). In contrast, residues mediating contact to the other Fc-chain (C2
-A) are either not conserved (C2
-A1) in gpTRL11 or allow the addition of a new N-linked glycan (C2
-A2). Taken together, alignment of the gpUL119-118 as well as of the gpTRL11 vFc
R amino acid sequences with cFc
R domains predicts the presence of a single IgSF-like domain in the extracellular regions of each viral Fc
R homolog.
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R genes may account for the observed FcBPs became implausible. In a systematic approach, deletion of a total of almost 40-kbp encompassing 52 predicted ORFs, including 36 ORFs coding for bona fide nonessential glycoproteins, was performed to locate the responsible gene regions within the 229,351-bp AD169 genome. This approach appeared promising, since the genes m138 of MCMV and US7/US8 of HSV coding for vFc
R molecules are dispensable for virus replication in vitro (11, 42, 50). Indeed, this assumption was confirmed in the cases of both of the HCMV-encoded vFc
Rs. Moreover, we extend the list of predicted HCMV ORFs not required for replication in vitro by 52. Altogether three early genes of HCMV AD169 were demonstrated to code for two vFc
R molecules with distinct biochemical properties. The ORF IRL11 and its identical copy, TRL11, encode the vFc
R gp34, confirming recently published work (41). The spliced gene UL119-118 codes for the vFc
R gp68. Expression of the viral genes during the HCMV replication cycle occurs simultaneously yet independently. Isolated expression of their products proved that each molecule has intrinsic Fc binding capabilities. Both FcBPs readily reach the cell surface, thus constituting genuine Fc
Rs.
Simultaneous synthesis of two vFc
Rs is a property unique to HCMV among the herpesviruses. At a first glance, this feature adds another example to the equipment with redundant glycoproteins that HCMV employs to modulate major histocompatibility complex (MHC) molecules (26) or the multitude of G coupled receptor homologs within the HCMV genome (8). According to rough structural, functional, and genetic criteria, such as binding specificities for IgG of different species and their sequence relatedness with cFc
Rs, gpTRL11 and gpUL119-118 can be readily discriminated. Many viruses, particularly herpesviruses, have captured and modified cellular genes to decoy the host immune response. HCMV encodes homologs of MHC class I (8), chemokine receptors (8), chemokines (54), and interleukin-10 (37). Both vFc
Rs appear phylogenetically congruent with host Fc
Rs and are predicted to form IgSF-like domains. Specifically, gpUL119-118 relates most closely to the third domain of Fc
RI, while the gpTRL11 is reminiscent of the second domain of Fc
RII/III. Facilitated by the available ultrastructural information on cFc
Rs (60, 61, 68), this study identifies for the first time the presence of structural homologs of cellular Fc
Rs within a cytomegaloviral genome. Detailed sequence alignment of the MCMV m138 gene reveals significant homology with mouse Fc
Rs and predicts the preservation of three Fc
R-derived putative IgSF domains (A. Zimmermann and H. Hengel, unpublished data), further highlighting the impressive diversification and redundancy of Fc
R structures. It is tempting to speculate that the presence of vFc
R homologs may indeed constitute a typical feature of CMV genomes.
Distinct IgSF-like domains within vFc
Rs reflect genealogical differences of the inserted genes and independent integration into the relatively stable HCMV DNA genome. Differential conservation and variation of vFc
Rs during millions of years of HCMV coevolution with its host is likely to reflect adaptation to and selection for specific molecular purposes. While the conserved hydrophobic core residues of ß sheets promote folding of IgSF domains, the loop residues are free to vary considerably and may serve as a substrate for selection in phylogeny. New state-of-the-art algorithms (34) (available from the internet at http://bioinf.cs.ucl.ac.uk/psiform.html) providing largely correct structural information of already crystallized Fc
RII and Fc
RIII suggest from the amino acid sequence of gpUL119-118 a composition of seven ß sheets for the putative IgSF-like domain in gpUL119-118 resembling the architecture of IgSF domains of cFc
Rs (Zimmermann and Hengel, unpublished). ß sheets within the IgSF-like domain of gpTRL11 predicted by this algorithm are supposed to be interrupted by an
-helical conformation. Interestingly, the Fc binding contact interface of the neonatal Fc receptor includes a helical domain as determined by crystal structure (5, 6). Given such a scenario, gpUL119-118 might have been selected for the maintenance of the IgSF domain during evolution, while a different selection pressure allowed the disruption of the IgSF fold of the gpTRL11 molecule while retaining its Fc binding capability.
The topological composition of vFc
Rs differs from the extracellular part of cFc
Rs. Fc
RI possesses an extra IgSF domain compared with the lower-affinity receptors Fc
RII and Fc
RIII, which shows less similarity with the other two domains. The third domain of Fc
R is responsible for high-affinity Fc binding. Analysis of mutant and chimeric Fc
Rs showed that removal of the third domain of Fc
RI abrogates high-affinity binding to monomeric IgG, although domains 1 and 2 were sufficient to retain a weak affinity for IgG (30). It is, therefore, remarkable that single IgSF-like domains of the HCMV-encoded Fc
Rs are sufficient to mediate strong Fc-dependent binding of IgG. Moreover, the relative position of IgSF domains in both vFc
R molecules of HCMV differs in that they are located in the N' terminal part of the molecule. The presence of a single IgSF-domain near the N' terminus is a structural feature resembling the recently discovered Fc
/µR (59). Assessment of binding affinities of IgG subclasses, domain swap experiments, and determination of the disulfide bonding pattern and crystal structures are required to investigate the impact of the Ig-SF-like domains for the interaction of gpTRL11 and gpUL119-118 with Fc.
At present, the biological role of the HCMV-encoded vFc
Rs is still unclear. A paradigm for the function of virus-encoded Fc
Rs is represented by HSV gE/gI binding both IgG aggregates and monomers (7, 17). Alignment of the extracellular HSV gE residues required for IgG binding (aa 322 to 359) reveals some homology with the second domain of cFc
Rs (17). Binding the Fc part of immune IgG that recognizes its target antigen on the surface of infected cells or viral particles, HSV gE/gI initiates a process called antibody bipolar bridging (20). As a consequence, the vFc
R blocks antiviral activities mediated by the Fc domain of IgG, e.g., complement fixation and activation as well as ADCC (18). In vivo experiments using a mouse model of HSV infection support the notion that this mechanism may provide significant protection to the virus against antibody-mediated immunity and thus gives a replicative advantage (49). The function of the MCMV m138-encoded vFc
R is less clear. As expected for its hypothetical role in immune evasion, an MCMV mutant lacking m138 expression showed drastically reduced replication in vivo (11). However, attenuation of the mutant was also seen in antibody-deficient µMT- mice, which was interpreted to mean that this phenotype is not mainly dependent on the Ig binding property. This conclusion could be premature for two reasons. First, deletion of m138 may affect the transcription of flanking genes, since several ORFs of this gene region share common mRNA transcription units (63). Neighboring genes of this region have been implicated in macrophage tropism and thereby MCMV replication in vivo (23, 24). Second, replication of the
m138 mutant was assessed only during the primary phase of MCMV infection. In this situation, antibodies do not contribute to viral control (35). The data do not rule out that the m138-encoded vFc
R still has a role during recurrent phases of infection when antibodies efficiently limit virus dissemination and transmission (35, 55).
Besides interacting with immune IgG, vFc
Rs could serve further purposes. Given the fact that CMV targets cells constitutively expressing cFc
Rs, like monocytes, macrophages, and dendritic cells for latent and productive infection, vFc
Rs could act as an agonist or competitive antagonist for cFc
Rs. The cFc
R-Ig interaction may be a promising target for the downregulation of immune responses or the control over the activation state of myelomonocytic cells. Notably, HCMV-encoded Fc
Rs share not only structural features and the Fc-binding capability with cFc
Rs, but also the propensity to enter the endocytic pathway. The restricted half-life for both gpTRL11 and gpUL119-118 is due to a rapid degradation in endolysosomal compartments (R. Atalay and H. Hengel, unpublished data). Considering the abundant synthesis and fast endocytosis of gpTRL11 and gpUL119-118 at late times of infection, vFc
Rs could serve as an efficient transport device, disposing antiviral antibodies from the cell surface to the endolysosome for destruction. Hypothetically, this pathway could be exploited by antibody-coated viral particles to enter CMV-infected cells. Certain viruses, e.g., human immunodeficiency virus (HIV), are able to initiate gene expression and replication after entry via endosomal compartments (19). Indeed, HCMV-induced Fc binding molecules have been proposed to confer HIV susceptibility in an antibody-dependent manner to human fibroblasts which lack the CD4 receptor (44). This could open up a CD4-negative compartment for HIV replication where HIV may benefit from the multitude of stealth mechanisms by which HCMV avoids immune attack.
We are grateful to Katja Wichmann and Bettina Bauer for expert technical assistance, Henrike Reinhard for constructing vaccinia virus recombinants, and Thomas Mertens, University of Ulm, for generously providing clinical isolates.
This study was supported by grants from the Deutsche Forschungsgemeinschaft through SFB 421 project A8 and SFB 455 projects A6, A2, and A7.
Present address: Zentrum für Angewandte Medizinische Forschung, Universität Halle-Wittenberg, 06120 Halle, Germany. ![]()
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