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Journal of Virology, March 2001, p. 2253-2261, Vol. 75, No. 5
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.5.2253-2261.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Effect on Polyomavirus T-Antigen Function of
Mutations in a Conserved Leucine-Rich Segment of the DnaJ
Domain
Hongyun
Li,
Karin
Söderbärg,
Hamid
Houshmand,
Zhi-Yong
You, and
Göran
Magnusson*
Department of Medical Biochemistry and
Microbiology, Biomedical Center, Uppsala University, Uppsala, Sweden
Received 15 July 1999/Accepted 17 November 2000
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ABSTRACT |
The N-terminal part of the mouse polyomavirus T antigens contains a
highly conserved segment (-LLELLKL-), including amino acid
residues 13 to 19. The sequence motif is predicted to form alpha helix
I in the DnaJ domain of the T antigens. Four mutants with conservative
substitutions of amino acid residues 13 and 14 were constructed. Of the
four substitutions, L13M, L13I, L13V, and L14V, only L13V resulted in a
phenotypic change. In transfected mouse cells, L13V large T antigen
showed a more than 100-fold-reduced viral DNA synthesis. The viral
replication could not be rescued by cotransfection of the cells with
DNA expressing small t antigen or a large T antigen truncated at the C
terminus that would compensate for a defect in host cell stimulation.
In contrast to the effect on DNA replication, the L13V substitution in
large T antigen did not prevent complex formation with Hsc70 and the Rb
protein. Also, the activity of the protein in transactivation of
transcription from the adenovirus E2 promoter was unimpaired, showing
that the transcription factor E2F was released from pRb. The L13V
substitution also caused a defect in small t antigen. However, this
phenotypic change was due to protein instability. In contrast, middle T
antigen with the L13V substitution remained stable and functional in
cellular transformation. Together, the data show that the effect of the L13V substitution did not abrogate the Hsc70 interaction of the DnaJ
domain. However, it is possible that the substitution of amino acid
residue 13 affected specific DnaJ functions of large T antigen.
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INTRODUCTION |
Polyomaviruses establish persistent
infections in their hosts. The limited size of the viral genome makes
the replication of viral DNA dependent on cellular enzymes. For this
reason, viral early proteins, the T antigens, induce quiescent cells to
enter the cell division cycle. Mouse polyomavirus encodes four early proteins: large, middle, small, and tiny T antigen (47,
51). These proteins are translated from mRNAs formed from a
precursor by differential splicing. The four mRNAs have a common
5'-terminal sequence corresponding to 79 translated codons. Downstream
of the splice points in mRNA, translation results in polypeptide segments unique to each T antigen.
The N-terminal common region of the T antigens (crt) is
homologous to the conserved domain of the DnaJ family of molecular chaperones (5, 28). The J domain, consisting of
approximately 70 amino acid residues that form four alpha helices,
binds to and stimulates the ATPase activity of proteins belonging to
the Hsp70/DnaK family (9). In a loop between helices II
and III there is a conserved amino acid motif, the J box (-HPD-), which contacts Hsp70 in the formation of a binary complex (21).
The DnaJ-homologous structure of polyomavirus T antigen has DnaJ
activity, since binding to Hsp70 protein and activation of its ATPase
activity have been demonstrated (27, 47). Besides the
-HPD- motif in the J domain, the T antigens of many polyomaviruses
contain a second, highly conserved leucine-rich motif located at a
position corresponding to alpha helix I. However, this leucine-rich
motif is not particularly conserved in other DnaJ proteins (see Fig. 1), suggesting that it might confer a T-antigen-specific function. In
mouse polyomavirus the motif at the putative alpha helix I has the
sequence -LLELLKL-.
Large T antigen controls viral DNA synthesis by binding to the origin
of replication and forming a homomultimeric complex that unwinds the
two DNA strands (14). In this process, large T antigen
also interacts with cellular replication proteins, directing them to
the viral replicon. In simian virus 40 large T antigen, the J domain
was shown to be involved in the initiation reaction, probably in the
formation or dissociation of protein complexes (8). The J
domain of large T antigen is also involved in the interaction with
cellular proteins indirectly involved in replication. One such
interaction is with the Rb family of proteins (48, 53). In
mouse polyomavirus large T antigen, the segment -DLFCYE-, located on the C-terminal side of the J domain at amino acid
residues 141 to 146, mediates binding to the pocket of these proteins
(pRb, p107, and p130) (17, 31, 50). However, for
dissociation of the complex with transcription factor E2, interaction
of pRb with the J domain of large T antigen appears to be necessary, since mutant polypeptides with amino acid substitutions of the -HPD-
motif are defective in this respect (48). The released transcription factors positively regulate the expression of a set of
genes whose products participate in replication, including the
synthesis of viral DNA. Binding of pRb to large T antigen is also
necessary for its activity in immortalization of rodent embryonic cells
(1, 10, 24, 25, 46).
Middle T antigen is the main transforming protein of mouse
polyomavirus. It has no known enzyme activity but acts by binding to
cellular polypeptides involved in transduction of growth signals (reviewed in references 12 and 26). The contribution of
the J domain to the function of middle T antigen has not been
systematically studied. However, deletions affecting this segment of
the polypeptide do not damage its transforming activity or binding to
protein phosphatase 2A (7, 19). Small t antigen is also
able to bind to the A-subunit of protein phosphatase 2A
(43). An apparently separate function of small t antigen
is to stimulate the activity of large T antigen in viral DNA
replication. Whether this effect of small t antigen is caused by direct
activation of large T antigen or by influence on cellular replication
factors is not known.
Functional studies of the J domain, using mutant proteins, have been
focused on the highly conserved J box. Here we report on the effects of
mutations altering alpha helix I of the J domain of polyomavirus T antigens.
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MATERIALS AND METHODS |
Cells, genomes, and transfection methods.
NIH 3T3 and Swiss
3T6 mouse fibroblast cells were obtained from ATCC (Manassas, Va.), and
Fischer rat FR3T3 cells were a gift from F. Cuzin (Nice University).
Primary cell cultures of rat embryo fibroblasts (REF) were established
from 15- to 16-day-old whole rat embryos (50). Cell
cultures in 6-cm-diameter petri dishes were maintained in Dulbecco
modified Eagle medium (DMEM) supplemented with serum as indicated.
Transfection experiments were carried out with growing cells that had
been plated 20 h earlier at a density of 3 × 105
cells per petri dish. In various DNA transfection experiments we used
DEAE-dextran-chloroquine (36), Lipofectamine as
recommended by the manufacturer (Life Technologies), or coprecipitation
with calcium phosphate (56). Polyomavirus genomes were
propagated as recombinants of plasmid pBR322 or pML (35),
joined at the single BamHI sites. Mutants dl1061
(40), MT-1, and ST-1 (58) have deletions that
restrict early viral gene expression to large, middle, or small T
antigen, respectively. Mutant mu1355/dl1061 produces an N-terminal fragment of large T antigen which is inactive in
viral DNA synthesis but retains the ability to bind the cellular pRb
(50), and mutant dl1384/dl1061 has a
deletion at nt 986 to 997, encoding a large T antigen that is deficient
in pRb binding (50). The reporter gene constructs pPYLcat
and pE2cat have been described elsewhere (34, 55). In
these plasmids the chloramphenicol acetyltransferase gene is located
downstream of the polyomavirus late promoter or the adenovirus E2
promoter, respectively. The previously published genotypes and
expression properties of polyomavirus genomes are summarized in Table
1. For analysis of viral DNA replication
a reporter plasmid, PyOrirep/pUC18, was used. It contained
the polyomavirus origin of DNA replication (nt 4634 to 5293 and 1 to
174) inserted into the BamHI site of pUC18 DNA.
Wild-type and mutant large T antigen were expressed using the pcDNA3
vector (InVitrogen). The large-T-antigen-coding sequence of
polyomavirus mutant LT-1 DNA and its derivatives,
crtL13V/E15D, crtL14V/E15D, and
crtP43S, were inserted into the EcoRV site of pcDNA3. Wild-type and mutant crtL13V/E15D small t antigen
were expressed from the early coding sequences of ST-1 DNA inserted into pcDNA3. The Rb protein p105 was expressed from plasmid pSGRb (kindly provided by W. G. Kaelin), containing cDNA cloned in pSG5 (Stratagene).
Analysis of protein expression.
For radioactive labeling of
polypeptides, the cells were first incubated for 30 min in
methionine-free DMEM buffered with 20 mM HEPES.
[35S]methionine was added (150 µCi per culture), and
the incubation of the cells was continued for 4 h. The cell were
lysed in a buffer consisting of 10 mM Tris-HCl (pH 8.0), 137 mM NaCl,
1.0 mM dithiothreitol, 1.0 mM MgCl2, 1.0 mM
CaCl2, 1.0 mM EDTA, 10% (vol/vol) glycerol, 1.0%
(vol/vol) Nonidet P-40, 50 µg of phenylmethylsulfonyl fluoride, and
1.0 µg of aprotinin per ml. After 30 min at 0°C, nuclei and cell
debris were removed by centrifugation. For immunoprecipitation and
immunoblot analysis of T antigen, the monoclonal antibodies (MAb) LT1
(13), F4, and F5 (42) were used. For
immunoprecipitation of pRb and Hsc70 we used the MAb Ab1 (Oncogene
Sciences) and MAb SP822 (Stressgene), respectively. In
immunoprecipitation, antibodies were captured using protein G-Sepharose
(Pharmacia Biotech).
Analysis of viral DNA replication.
Viral DNA was excised
from the recombinant plasmids by digestion with BamHI,
recircularized by treatment with T4 DNA ligase at a concentration of 5 µg of DNA per ml, and used for transfection of 3T6 cells.
Low-molecular-weight DNA was selectively extracted from cells, and
viral DNA was partially purified (40). It was cleaved with
DpnI and BamHI, resolved by agarose gel
electrophoresis, and transferred to a hybridization membrane
(52). DNA on the membrane was annealed with
32P-labeled polyomavirus DNA (15), and bound
radioactivity was quantified using a Molecular Imager G-450 (Bio-Rad).
In analyses of viral DNA replication with large T antigen expressed at
a high level, the origin of viral DNA replication was present on a
separate plasmid, PyOrirep/pUC18. Here, newly replicated
DNA was isolated after digestion with DpnI and
PstI and was detected using a 32P-labeled
PstI fragment excised from the same plasmid.
Analysis of transcriptional transactivation.
REF cultures
were transfected with a mixture of pPYLcat or pE2cat DNA and a second
plasmid expressing large T antigen. Protein extracts were prepared at
40 h posttransfection by addition of 0.10 ml of 10 mM Tris-HCl (pH
7.9), 150 mM NaCl, 1.5 mM MgCl2, and 0.5% (vol/vol)
Nonidet P-40. Chloramphenicol acetyltransferase (CAT) activity in
0.04-ml portions was assayed by the method of Gorman et al.
(20), as modified by Herbomel et al. (23).
Incubations were done at 37°C for 3 h. The substrate and the
products were separated by thin-layer chromatography. For quantitation
of the reaction, the thin-layer chromatograms were analyzed in a
Molecular Imager.
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RESULTS |
Mutant construction.
The conserved amino acid motif
-LLELLKL- in the common region of mouse polyomavirus T
antigens (Fig. 1) is predicted to form the alpha helix I (5) of the J domain. To construct
mutants with base-pair substitutions in the codons of this conserved
motif, a unique BglII cleavage site was introduced by
changing bp 219 of polyomavirus DNA from A-T to T-A. This transversion
resulted in the conservative amino acid replacement E15D. The mutation did not detectably alter the activity of mouse polyomavirus large T
antigen in the initiation of viral DNA replication (data not shown). In
further mutagenesis we replaced the highly conserved residues L13 and
L14 of polyomavirus T antigens. Mutations leading to the amino acid
substitutions L13M, L13V, and L13I were introduced. In addition, a
mutation leading to the P43S substitution was introduced to provide a
reference for defective DnaJ activity (8, 49). The mutants
were denoted crt (common region T antigen). None of these
amino acid substitutions at residue 13 led to disruption of the
predicted alpha-helical structure. All these mutations were made in the
genetic background of dl1061, having a deletion that
restricts early gene expression to large T antigen. To investigate the
effect of the crt mutations on middle and small t antigen, an AvaI restriction fragment (nucleotides 658 to 1018) was
substituted for the homologous fragment of MT-1 and ST-1 DNA. In these
viral genomes deletions corresponding to intervening sequences in RNA splicing restrict early gene expression to middle T antigen and small t
antigen, respectively.

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FIG. 1.
Conserved amino acid motif in the N-terminal part of
polyomavirus (POV) T antigens. Deduced amino acid sequence of indicated
T-antigen segments encoded by mouse polyomavirus (EMBL accession no.
J02288), hamster polyomavirus (accession no. M26281), Kilham mouse
polyomavirus (accession no. M55904), lymphotropic polyomavirus
(accession no. K02562), simian virus 40 (accession no. V01380), BK
virus (accession no. V01108), and budgerigar fledgeling disease virus
(accession no. M20775) are shown. The homologous segment of the HDJ-1
protein (accession no. X62421) and the consensus amino acid sequence of
DnaJ proteins (Prosite accession no. PD000231) are included as a
reference. The highly conserved leucine residues in T antigens are
highlighted by shading.
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Activity of large T antigens produced by crt mutants in
DNA replication.
To test the activity of the mutant large T
antigens in viral DNA replication, mouse 3T6 cells were transfected
with the mutant genomes prepared by excision from recombinant plasmids.
At 40 h posttransfection, viral DNA was selectively extracted from the cells and partially purified. After digestion with the
methylation-dependent restriction endonucleases DpnI and
BamHI that linearized the DNA molecules, they were resolved
by agarose gel electrophoresis and blotted onto a hybridization
membrane. Detection of polyomavirus DNA was done by annealing with a
32P-labeled probe. The autoradiogram is shown in Fig.
2A, and quantitative data from a similar
experiment (Fig. 2B) showed that large T antigens with the L13I, L13M,
and L14V substitutions supported viral DNA replication at 75 to 90% of
the level reached with the wild-type protein. In contrast, the mutant
expressing large T antigen with the L13V substitution replicated very
poorly. The amount of viral DNA produced during 40 h was only 0.1% of
that for the dl1061 control.

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FIG. 2.
Activity of wild-type (WT) and mutant large T antigen in
viral DNA replication. (A and B) Cultures of mouse 3T6 cells (5 × 105 cells) grown in DMEM containing 10% horse serum were
transfected with 0.1 µg of viral DNA using the DEAE-dextran method.
The cells were transfected either with a viral genome expressing
wild-type or mutant large T antigen (LT) alone (A) (black columns in
panel B) or together with a second viral genome expressing small t
antigen (ST-1) or truncated large T antigen (dl1355).
Low-molecular-weight DNA was selectively extracted at 42 h
posttransfection, partially purified, cleaved with DpnI and
BamHI, and subjected to agarose gel electrophoresis. DNA was
transferred from the gel to a hybridization membrane and was annealed
with 32P-labeled polyomavirus DNA. Radioactivity retained
on the filters was then determined by autoradiography (A) or quantified
in a Molecular Imager. The columns represent the average values of
determinations of samples from duplicate cultures, and the error bars
show the variation. (C and D) Cultures of NIH 3T3 cells (5 × 105 cells) grown in DMEM containing 10% fetal bovine serum
were transfected, using Lipofectamine, with 1.0 µg of
PyOrirep/pUC18 and 1.0 µg of pcDNA3LT-wt,
-L13V/E15D, or -L14V/E15D, encoding large T antigen. One culture was
transfected with only PyOrirep/pUC18 DNA (lanes M). (C)
Newly replicated DNA was analyzed as described above. (D) Cell extracts
from parallel transfected cultures were analyzed by immunoblotting,
using MAb F5. T Ag shows the position of large T antigen.
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To rule out that the L13V substitution made large T antigen unstable,
DNA replication was analyzed with large T antigen expressed at a high
level, allowing parallel determination of protein. NIH 3T3 cells were
transfected with pcDNA3/LT-wt, pcDNA3/LT-L13V/E15D, pcDNA3/LT-L14V/E15D or, as a negative control, pcDNA3 mixed with PyOrirep/pUC18. Analysis of newly replicated DNA isolated
at 40 h posttransfection showed (Fig. 2C) that the L13V
substitution in large T antigen severely decreased its activity in the
initiation of viral DNA replication also in this experiment. The
synthesis of a reporter plasmid, containing an origin of DNA
replication, in cells transfected with pcDNA3/LT-L13V/E15D was only 1%
of the amount obtained in cells expressing wild-type or L14V/E15D large
T antigen. To determine the quantity of large T antigen in the cells,
protein was extracted from parallel, transfected cultures and was
resolved by sodium dodecyl sulfate-polyacrylamide gel electrophoresis
(SDS-PAGE). Analysis of large T antigen by immunoblotting showed (Fig.
2D) that the amount of immunoreactive protein in cells expressing the
L13V mutant protein was slightly lower than the corresponding amounts
of wild-type and L14V mutant protein. However, this difference was too
small to explain the large effect of the L13V substitution on viral DNA
replication. Immunofluorescence analysis using MAb LT1 showed that both
L13V and L14V large T antigens were located in the nucleus (data not
shown). Hence, large T antigen with the L13V substitution appeared to
have lost most of its activity in the initiation of viral DNA synthesis
in both 3T6 and NIH 3T3 cells.
Attempts to rescue the replication function of mutant large T
antigens.
Besides controlling the initiation of each round of
viral DNA synthesis, large T antigen participates in the induction of cellular DNA synthesis that is a prerequisite for the viral
replication. If the substitution of amino acid residue 13 or 14 inhibited the binding of large T antigen to the origin of viral DNA
replication, or any ensuing cis activity in viral DNA
synthesis, then other T-antigen proteins would probably be unable to
rescue that function. If, on the other hand, a mutant large T antigen
was primarily deficient in the perturbation of cell cycle control,
rescue of function might be possible.
Small t antigen enhances viral DNA replication in 3T6 mouse
fibroblasts. The mechanism is unknown but may relate to site-specific phosphorylation of large T antigen required for its activity in viral
DNA replication. To investigate the effect on the activity of the four
crt mutant large T antigens, 3T6 cells were cotransfected with ST-1, expressing wild-type small t antigen, and each of the plasmids encoding wild-type or crt mutant large T antigen.
The amounts of viral DNA formed during 40 h following transfection are shown in Fig. 2B. Small t antigen increased viral DNA synthesis in
all cases. The synthesis of crtL13I/E15D/dl1061,
crtL13M/E15D/dl1061, and
crtL14V/E15D/dl1061 reached almost the same
level as that of dl1061 DNA. In contrast, mutant
crtL13V/E15D/dl1061 remained at 0.1% of the
control level. However, the activity of this mutant large T antigen
also was stimulated by small t antigen. We showed earlier
(50) that mutant large-T-antigen polypeptides with
substitutions in the pRb binding site (-DLFCYE-) at
amino acid residues 141 to 146 were partially defective in viral DNA
synthesis. In these cases cotransfection with a genome expressing a
287-amino-acid-residue N-terminal fragment of large T antigen but with
a normal pRb binding site overcame the deficiency. Here we investigated
whether this truncated large T antigen
(mu1355/dl1061) had a stimulatory effect on the
viral DNA synthesis of the four crt mutant forms of the protein. Mouse 3T6 cells were transfected with the two types of DNA,
and the amount of newly synthesized viral DNA was determined. The
result showed (Fig. 2B) that the activity in viral DNA replication of
the crt mutant large T antigens was not increased by the
coexpression of the mu1355 large T antigen. Hence the L13V
substitution in large T antigen appeared to have a direct effect on the
activity of the protein in viral DNA replication. However, this
experiment does not exclude additional effects of the mutation on
large-T-antigen activities.
Binding of crt mutant large T antigen to Hsc70 and
pRb.
To investigate whether the L13V substitution affected the
DnaJ activity of large T antigen, binding to the Hsc70 protein was tested. NIH 3T3 cells that have a high constitutive expression of this
polypeptide were used for the analysis. The cells were transfected with
plasmids expressing wild-type or mutant crtL13V/E15D large T
antigen. As a negative control, a plasmid, pcDNA3/LT-P43S, was used
that encoded a mutant large T antigen with a P43S substitution in the
universally conserved -HPD motif. This mutant large T antigen does not
form a stable complex with Hsc70 (8, 49). At 42 h
posttransfection, protein was extracted and the cleared lysates were
immunoprecipitated with either MAb LT1 directed against large T antigen
or MAb SP822 directed against Hsc70. After SDS-PAGE, protein was
transferred to nitrocellulose membranes by blotting. The membranes were
then developed with MAb F5 directed against large T antigen or MAb
SP822. Chemiluminograms show (Fig. 3)
that cells transfected with plasmids encoding wild-type, mutant
crtL13V/E15D, and crtP43S large T antigens
expressed easily detectable amounts of the large-T-antigen protein.
Moreover, there was no apparent difference in the association of
wild-type and mutant crtL13V/E15D large T antigen with
Hsc70. In contrast, in extracts of cells transfected with
pcDNA3/LT-P43S there was no detectable Hsc70 protein
coimmunoprecipitated with large T antigen.

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FIG. 3.
Complex formation of mutant and wild-type large T
antigen with Hsc70. Cultures of NIH 3T3 cells (5 × 105 cells) were transfected, using Lipofectamine, with
plasmid pcDNA3/LT-wt (WT), -L13V/E15D (L13V), or P43S encoding large T
antigen. As a negative control, cells were transfected with pcDNA3
without an insert (M). At 42 h posttransfection, cell extracts
were prepared and incubated with either MAb LT1 (anti-large T antigen)
or MAb SP822 (anti-Hsc70). Immunoprecipitated (IP) material was
resolved by SDS-PAGE followed by immunoblotting, using either MAb F5
(anti-LT) or MAb SP822. The positions in the gel of large T antigen
(TAg) and Hsc70 relative to markers with known size are indicated.
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The -DLFCYE- segment of large T antigen (amino acid residues 142 to
146) binds to the Rb pocket family of proteins. However, for some
functional interactions between large T antigen and the pRbs, a
functional J domain of the former protein is also required (48,
49, 57). To test whether large T antigen with the L13V substitution bound to pRb, we cotransfected cells with one plasmid encoding pRb (pSGRb) and a second plasmid encoding wild-type or mutant
crtL13V/E15D large T antigen. As a negative control, the mu1384 large T antigen, with amino acid residues 143 to 146 deleted, was used (50). At 42 h posttransfection,
[35S]methionine was added to the cultures and protein was
labeled for 4 h. After lysis of the cells, large T antigen was
immunoprecipitated with MAb LT1, and pRb was immunoprecipitated with
MAb Ab1 from the extract of cells transfected with the pRb-encoding
plasmid alone. Polypeptides were resolved by SDS-PAGE and then analyzed by autoradiography (Fig. 4). Extracts of
cells transfected with plasmids encoding wild-type or mutant large T
antigen contained a 90-kDa polypeptide reacting with MAb LT1. Its
electrophoretic mobility was somewhat heterogenous, consistent with the
known modifications of large T antigen in mammalian cells (4,
22). A ca. 105-kDa polypeptide coimmunoprecipitated with
wild-type and mutant crtL13V/E15D large T antigen but not
with the mu1384 protein. A similar ca. 105-kDa polypeptide,
reacting with MAb Ab1, was observed in cells transfected with only
pSGRb, but was below the detection level in untransfected cells.
Together, the data indicated that wild-type and mutant
crtL13V/E15D large T antigen but not mu1384 large
T antigen coimmunoprecipitated with pRb. Thus, the L13V substitution
did not impair the formation of large T antigen-pRb complexes.

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FIG. 4.
Complex formation of wild-type and mutant large T
antigen with pRb. Cultures of NIH 3T3 cells were transfected, using
Lipofectamine, with plasmid pSGRb (2.0 µg) alone or mixed with 1.0 µg of pcDNA3/LT-wt (WT), -L13V/E15D (L13V), or dl1384
(1384), encoding large T antigen. As a control (M), cells were
transfected with pcDNA3 without an insert. At 42 h
posttransfection, cells were labeled for 4 h with
[35S]methionine. Protein extracts were prepared, and
immunoprecipitation (IP) was done with MAb LT1 directed against large T
antigen or with MAb Ab-1 directed against pRb. Immunoprecipitated
material was resolved by SDS-PAGE in an 8% gel, and radioactivity was
detected by autoradiography. The positions in the gel of large T
antigen (TAg at 90 kDa) and pRb (105 kDa) relative to markers with
known size are indicated.
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Transcriptional transactivation by crt mutant large T
antigens.
Polyomavirus large T antigen is able to transactivate
transcription by more than one mechanism. The transcription factor E2F is activated by release from the Rb family of proteins after binding of
large T antigen (39). Mutant large T antigens with amino acid substitutions in the conserved loop of the J domain were shown to
bind to pRb but were defective in the induction of E2F release
(48, 57). A second, for the polyomavirus protein as yet
uncharacterized, transactivation mechanism operates on various transcription units, including the viral late genes (6, 29, 34). This mechanism may involve binding of the cellular p300 to
the C-terminal part of large T antigen (33, 38). To test the ability of our crt mutant large T antigens in
transcription transactivation, they were expressed together with
reporter plasmids containing the adenovirus E2 (pE2cat) or polyomavirus
late promoter (pPYLcat) upstream of the cat gene. To ensure
that wild-type pRb was expressed, secondary REF cells were used in this
experiment. They were transfected with a recombinant plasmid encoding
wild-type or mutant large T antigen mixed with the plasmid carrying the reporter gene. As a negative control for large T antigen expression, we
used the plasmid pPY
E1, which has most of the T-antigen-coding sequences deleted but retains the regulatory elements of the viral genome. Under the conditions of the experiment, CAT expression from the
polyomavirus late promoter (Fig. 5A) was
relatively high even in the absence of large T antigen. Coexpression of
wild-type large T antigen or any of the four mutant forms stimulated
the activity of the viral late promoter two- to fourfold. The small differences in the activity of the wild-type and various mutant large T
antigens are probably not significant. The level of CAT expression from
the adenovirus E2 promoter was low in REF cells (Fig. 5B). However, in
the presence of large T antigen it was stimulated four- to sevenfold.
The wild-type and all four mutant forms of large T antigen had similar
effects on the activity of the E2 promoter. Hence the substitutions of
amino acid residues 13 and 14 of large T antigen did not impair the
DnaJ function of the protein that is required for a functional
interaction with pRb to release the transcription factor E2F
(48).

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FIG. 5.
Effect of wild-type and mutant large T antigen on the
polyomavirus late promoter and the adenovirus E2 promoter. Growing REF
cultures (5 × 105 cells) were transfected, using
Lipofectamine, with 1.0 µg of pPYLcat (A) or pE2cat (B) DNA mixed
with 1.0 µg of polyomavirus DNA cloned in plasmid pML. As a control
to expression of wild-type and mutant large T antigen, the mutant
PY E1 with a deletion of the early region was used. Cell extracts
were prepared at 40 h posttransfection, and CAT activity was
assayed. The 14C-labeled chloramphenicol substrate and the
acetylated products were separated by thin layer chromatography. The
radioactive spots were identified by autoradiography and quantified in
a phosphorimager. The relative enzyme activity in the absence of
large-T-antigen expression was set to 1. Wild-type and mutant large T
antigen (LT) are denoted by WT and the amino acid substitutions,
respectively.
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Stability of mutant crtL13V small and middle T
antigen.
An analysis of the small-t-antigen activity on
large-T-antigen-dependent viral DNA synthesis showed that the L13M,
L13I, and L14 substitutions did not impair this function (the activity
of wild-type small t antigen is shown in Fig. 2B). However, the
crtL13V/E15D small t antigen was completely inactive (data
not shown). To test whether this result was due to instability of the
mutant small t antigen, the expression plasmid pcDNA3/ST-L13V/E15D was
constructed. NIH 3T3 cells were transfected with this plasmid or
pcDNA3/ST-wt. As a negative control, pcDNA3 vector DNA without an
insert was used. At 42 h posttransfection, cells were lysed and
extracted protein was analyzed by immunoblotting using MAb F4. The
result shows (Fig. 6A) that the cells did
not contain detectable amounts of the mutant crtL13V/E15D
small t antigen, although the wild-type protein was easily detectable.
Together with the activity determination of mutant
crtL13V/E15D/ST-1, the data indicated that a substitution at
position 13 of leucine for valine, but not for isoleucine or methionine, made small t antigen labile.

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|
FIG. 6.
Stability of mutant small and middle T antigens. (A)
Cultures of NIH 3T3 cells were transfected as described in the legend
to Fig. 5. At 42 h posttransfection, cell extracts were prepared
and subjected to SDS-PAGE in a 12% gel, followed by immunoblotting
using MAb F4 reacting with small t antigen. Lane M, material from cells
transfected with pcDNA3 without insert; control lane, small t antigen
produced in insect cells. (B) FR3T3 cells were transfected, using the
calcium phosphate coprecipitation method with MT-1 DNA, encoding
wild-type protein or mutant protein with the indicated substitutions at
residues 13 and 14, respectively. Clones of transformed cells were
isolated, and extracts were prepared from cultures of these cloned
cells. Proteins were resolved by SDS-PAGE in an 8% gel, and T antigen
was identified by immunoblotting using MAb F5. Lane M, extract of
untransformed FR3T3 cells. The positions in gels of middle T antigen
(MT), small T antigen (ST), and of markers with known sizes are
indicated.
|
|
The lability of small t antigen with the L13V substitution raised the
question of whether it had a similar destabilizing effect on middle T
antigen, since the sequences of the N-terminal 192 amino acid residues
of the two proteins are colinear. The activity of middle T antigen in
cellular transformation reflects its overall activity. Therefore, the
mutant derivatives of polyomavirus MT-1 DNA were used for transfection
of FR3T3 cells. Two days after transfection, the cells were replated at
a fivefold-lower density, and after another 10 days, foci of cells were
isolated by trypsinization in glass cylinders. Clones of transformed
cells were obtained at similar yields with wild-type and all four
crt mutant DNAs. Protein was extracted from cells of
individual clones and was analyzed by immunoblotting using MAb F5,
which recognizes middle T antigen. The experiment showed (Fig. 6B) that
all the clones of transformed cells, but not the negative control,
contained immunoreactive material with an electrophoretic mobility
corresponding to 55 kDa. This result indicated that the L13V
substitution did not have any negative effect on the stability or
activity of middle T antigen.
 |
DISCUSSION |
Processing of mouse polyomavirus early RNA by differential
splicing leads to four types of mRNA which share a 5'-terminal exon
segment. Therefore, the four translation products, the T antigens, have
identical N-terminal parts consisting of 79 amino acid residues. Most
of this segment forms a structure homologous to the DnaJ domain
(9, 28). Within this part of the T antigens, two short
amino acid sequences are highly conserved in the polypeptides encoded
by all known polyomaviruses. One is the -HPDKGG- motif containing the J
box. The other is highly conserved in T antigens but not in other DnaJ
proteins. Amino acid residues 11 to 20 of polyomavirus T antigens are
predicted (30) to form an alpha helix, corresponding to
helix I of the DnaJ protein. This putative helix is longer (residues 10 to 19) than the homologous structure in the human Hsp40 protein HDJ-1
(residues 5 to 10). In the alpha helix I of HDJ-1, the predicted
structure was confirmed by nuclear magnetic resonance analysis
(45). In large T antigen, leucine residue 13, which is
sensitive to substitution, would be located in alpha helix I or just
outside this structure if it has the same size as in the HJD-1 protein.
The high sequence conservation of this T-antigen segment suggests that
it has a strongly selected function. However, this function is not
necessarily related to DnaJ activity. Interestingly, the conserved
leucine-rich motif is related to the conserved region 1 of the
adenovirus E1A protein [(E/D)X3LX(E/D)LX2(L/I)], which is known to
participate in binding to several cellular proteins, such as pRb, Cdk2,
and p300, also called CREB-binding protein. (16, 54). To
study the function of the leucine-rich segment in polyomavirus T
antigens that corresponds to alpha helix I, we introduced minimal amino
acid changes that were unlikely to disrupt its potential helical
structure. In mutagenesis of codons for amino acid residues 13 and 14 in the T antigens, we selected conservative shifts to residues which
were not represented in the corresponding polypeptides of any known
polyomavirus (Fig. 1). L13 was completely conserved in T antigens.
Thus, we made the crt mutants L13I, L13M, and L13V. Position
L14 is less conserved, but a valine residue has not been observed at
this position in any of the known T antigens. Therefore, we made the
mutant L14V. All these mutants were constructed with DNA containing the
crtE15D mutation that results in a unique restriction
endonuclease cleavage site. Since an aspartic acid residue is present
at this position in the T antigens of the human and simian
polyomaviruses, we did not anticipate any phenotypic effect from the
replacement of the glutamic acid residue. This assumption was supported
by several experiments that showed normal T-antigen functions of the
crtE15D mutant (data not shown). To test the effect of the
other mutations on individual polyomavirus T antigens, the
crt mutations were combined with deletion mutants that
restricted splicing of the viral early RNA. Effects on viral DNA
synthesis transcriptional transactivation, binding to Hsc70 and pRb,
and cellular immortalization were then analyzed in transfection
experiments. We also analyzed the effect of the mutations on the
function of middle T antigen. However, in keeping with earlier studies
of deletion mutants (7, 19), the J domain of middle T
antigen appeared to have little influence on the known functions of the
protein. Previous analyses of the DnaJ domain of T antigens have been
focused on the interaction with DnaK homologs, such as Hsp70 and Hsc70,
and the specificity of interactions with cellular targets (8,
11). The J domain of T antigens can functionally substitute for
DnaJ in Escherichia coli cells (27). It binds
to Hsc70 in mammalian cells (8, 48) and interacts with
this protein by stimulating its ATPase activity (47). The
cooperation with Hsc70 or its homologs is required for functional
interactions with other cellular polypeptides, such as pRb (48,
53, 57).
Mutation of the highly conserved J box (-HPD-) impairs the function of
simian virus 40 large T antigen in initiation of viral DNA synthesis
(8). A nonnuclear localization might explain this
phenotype, since DnaK proteins have been reported to mediate nuclear
translocation (41). However, Sheng et al.
(48) showed that J-box-defective large T antigen had a
nuclear localization. Large T antigens with substitutions of amino acid
residue 13 or 14 also accumulated in the cell nucleus, as shown by
immunofluorescence (data not shown). The defect of the protein with an
alteration of the HPD box is probably in one or several of the numerous
protein-protein interactions that are involved in the initiation
process of DNA replication. The crt mutants analyzed in the
present study produce T antigens with a normal J box. However, even one
of the conservative amino acid substitutions in alpha helix I of the J
domain, L13V, caused a distinctive phenotype in viral DNA synthesis.
The impairment of viral DNA replication was traced to defects of both
large (Fig. 2) and small (Fig. 6A) T antigen. In large T antigen the
L13V substitution had a profound effect on viral DNA synthesis that was
not rescuable by coexpression of a truncated form of the polypeptide with an intact J domain. This N-terminal fragment of large T antigen has been shown to stimulate cellular and viral DNA synthesis by advancing the cell cycle (50). The activity of
crtL13V/E15D large T antigen was stimulated by coexpression
of small t antigen (Fig. 2B). However, in relation to the activity of
the wild-type protein, the defect of crtL13V/E15D large T
antigen remained. Hence it is probable that large T antigen with the
L13V substitution was impaired in its interaction with viral DNA or
cellular replication factors. However, purified crtL13V/E15D
large T antigen had normal DNA binding and unwinding activities
(unpublished data). The polyomavirus crtL13V large T antigen
was recently reported to be unstable when expressed in both mouse and
rat cells (32). In our investigation, the L13V
substitution had little effect on the stability of large T antigen in
NIH 3T3 cells (Fig. 2C and D). Moreover, analysis of stability in BHK
cells, following a pulse-chase protocol, showed that both wild-type and
L13V/E15D large T antigens had half-lives of approximately 8 h
(data not shown). It is possible that the combination of L13V and E15D
substitutions resulted in a more stable protein than the isolated L13V
substitution. Paradoxically, a C-terminal fragment of large T antigen,
devoid of the DnaJ domain, is able to support viral DNA. However, it is
probable that the full-length and truncated versions of the protein
behave differently in the assembly of DNA replication complexes,
providing an explanation for the involvement of the DnaJ structure in
viral DNA synthesis.
Small t antigen stimulates viral DNA synthesis, at least in some types
of mouse cells (2, 37). The simian virus 40 small t
antigen has been shown to transactivate the cyclin A gene, and mutation
of the J box disturbs this effect (44). Of the four mutants producing T antigens with amino acid substitutions of 13L and
14L, only the crtL13V/E15D small t antigen was defective in
stimulating viral DNA synthesis. However, this phenotype was linked to
instability of the protein (Fig. 6A). Since neither large nor middle T
antigen was destabilized by the L13V substitution, the unique part of
the proteins probably influences the structure of the DnaJ domain and
its stability.
The effect of the L13V amino acid substitution on the function of large
T antigen in viral DNA replication raised the question of whether the
observed defect was in DnaJ activity on DnaK-like proteins. Since
mutation of the J box results in loss of binding to Hsc70 and
transcription factor E2F activation, we investigated whether the L13V
and P43S substitutions in large T antigen caused similar defects. The
experiment was done with NIH 3T3 cells, which have a high constitutive
level of Hsc70. In a coimmunoprecipitation experiment there was no
difference in binding to Hsc70 of the wild-type large T antigen and the
protein with the L13V substitution. In contrast, large T antigen with
the P43S substitution in the J box did not form a stable complex with
Hsc70 (Fig. 3). This result suggests that conservative substitutions in
alpha helix I of large T antigen were not critical for the interaction
with Hsc70.
Binding of the pRb to large T antigen does not occur unless the
-DLFCYE- segment (residues 141 to 146) is present (17, 31, 50). However, for displacement from pRb of the transcription factor E2F, the DnaJ domain of large T antigen has to be functional. In
contrast, transactivation by large T antigen of the polyomavirus late
promoter is independent of pRb binding, since the -DLFCY- motif in the
protein is not required for this function (50). The
cellular pRb formed a complex with crtL13V/E15D large T
antigen but not with the truncated dl1384 protein lacking
residues 143 to 146 (Fig. 4). The large T antigen with the L13V
substitution also induced activation of the transcription factor E2F,
since all the crt mutants (L13M, L13I, L13V, and L14V) were
positive in transactivation of both the E2F-regulated E2 promoter from adenovirus and the polyomavirus late promoter (Fig. 5). Analysis of
cellular immortalization corroborated the conclusion that E2F was
activated, since lines of secondary REFs were established after
transfection with genomes expressing each of the four mutations (data
not shown).
Our data show that the four tested mutants have a DnaJ function, as
analyzed by interactions of large T antigen with Hsc70 and pRb.
However, the L13V substitution in large T antigen caused a distinct
defect of the protein in the initiation of viral DNA replication. Since
the amino acid replacement mapped in the core of the DnaJ domain, the
functional defect must by definition reflect a DnaJ activity. Thus, we
propose that the DnaJ domain of polyomavirus T antigens has more than
one specificity for the interaction with other proteins. Support for
this idea is provided by the work of Pipas (5), which
shows that the L-to-F substitution of conserved residue 19 in simian
virus 40 large T antigen (Fig. 1), which corresponds to residue 19 in
the polyomavirus protein, did not inhibit viral DNA synthesis but
instead abolished the activity of the protein in cellular
transformation and in assembly of virus particles.
After completion of this paper, a paper by Berjanskii et al. was made
public (3). These investigators demonstrated that residues
13 and 14 of polyomavirus T antigens form part of the J-domain alpha
helix I. It was also shown that the L13V substitution in an N-terminal
fragment of T antigen inactivated its DnaJ function in a
complementation assay performed with E. coli cells, possibly due to disruption of alpha helix I. In the reported structure, the side
chain of residue 13 is buried in the helix.
 |
ACKNOWLEDGMENT |
The experiments described in this report were supported
financially by the Swedish Cancer Society.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Box 582, SE-751
23 Uppsala, Sweden. Phone: 46-18-4714560. Fax: 46-18-509876. E-mail: mago{at}bmc.uu.se.
 |
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Journal of Virology, March 2001, p. 2253-2261, Vol. 75, No. 5
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.5.2253-2261.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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