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Journal of Virology, March 2001, p. 2246-2252, Vol. 75, No. 5
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.5.2246-2252.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Reversal of Human Immunodeficiency Virus Type 1 IIIB to a Neutralization-Resistant Phenotype in an Accidentally
Infected Laboratory Worker with a Progressive Clinical Course
Tim
Beaumont,1,2
Ad
van
Nuenen,1,2
Silvia
Broersen,1,2
William A.
Blattner,3
Vladimir V.
Lukashov,2,4 and
Hanneke
Schuitemaker1,2,*
Department of Clinical Viro-Immunology, CLB Sanquin, and
Laboratory for Experimental and Clinical
Immunology1 and Human Retrovirus
Laboratory4 of the University of Amsterdam,
Academic Medical Center,2 Amsterdam,
The Netherlands, and Institute of Human Virology, University of
Maryland, Baltimore, Maryland 212013
Received 13 September 2000/Accepted 8 December 2000
 |
ABSTRACT |
The role of humoral immunity in controlling human immunodeficiency
virus type 1 (HIV-1) is still controversial. The resistance of primary
HIV-1 variants to neutralization by antibodies, sera from
HIV-1-infected patients, and soluble CD4 protein has been suggested to
be a prerequisite for the virus to establish persistence in vivo. To
further test this hypothesis, we studied the neutralization sensitivity
of two IIIB/LAV variants that were isolated from a laboratory worker
who accidentally was infected with the T-cell-line-adapted neutralization-sensitive IIIB isolate. Compared to the original virus
in the inoculum, the reisolated viruses showed an increased resistance
to neutralization over time. The ratio of nonsynonymous to synonymous
nucleotide substitutions in the envelope gene pointed to strong
positive selection. The emergence of neutralization-resistant HIV
preceded disease development in this laboratory worker. Our results
imply that the neutralization resistance of primary HIV may indeed be
considered an escape mechanism from humoral immune control.
 |
INTRODUCTION |
The length of the asymptomatic
period between the moment of infection with human
immunodeficiency virus type 1 (HIV-1) and the development of
AIDS-like symptoms differs between patients. This may be interrelated
with variables such as the level of immune control, the biological
properties of the virus, and host susceptibility. High frequencies of
cytotoxic T lymphocytes have indeed been correlated with the clearance
of viremia during primary infection and prolonged asymptomatic survival
(39, 40, 48). Neutralizing antibodies emerge only
relatively late in the course of infection (28, 36, 37)
and may contribute to the control of virus replication. Indeed, passive
immunization in animal models provided partial protection (2, 31,
56), although this was not confirmed by all studies
(47). In addition, titers of neutralizing antibody correlated with a lack of disease progression in long-term survivors of
HIV-1 infection (7, 10, 15, 41, 44). Finally, the emergence of neutralization escape mutants has pointed to the presence
of humoral immunity (1, 18, 28, 60). The efficiency of
antibody neutralization in vivo may be limited by the neutralization resistance as generally observed for primary HIV-1 variants (1, 12, 35, 36). This resistance is observed in vitro for immune sera from HIV-infected patients and from vaccinees, for monoclonal antibodies, and for soluble CD4. With adaptation to replication in
immortalized cell lines, HIV-1 but also other lentiviruses, such as
equine infectious anemia virus and simian and feline immunodeficiency virus variants, become highly neutralization sensitive (4, 19,
32, 38, 51, 64). It is at present still unclear whether
neutralization resistance of primary HIV-1 should be considered an
escape mechanism from humoral immunity. Neutralization resistance in
vivo might be a prerequisite for pathogenicity of HIV because it will
allow the virus to persist in the presence of neutralizing antibodies.
To further study the clinical significance of primary HIV-1
neutralization resistance, we analyzed HIV-1 variants that were isolated longitudinally from a laboratory worker (LW-F) who progressed to AIDS within 8 years after accidental infection with the
T-cell-line-adapted (TCLA) neutralization-sensitive IIIB strain
(62).
 |
MATERIALS AND METHODS |
Cells.
Virus isolation and virus stock preparation were
performed with human phytohemagglutinin (PHA)-stimulated peripheral
blood mononuclear cells (PBMC) according to standard procedures
(53). PBMC were isolated from buffy coats from healthy
blood donor volunteers by Ficoll-Isopaque density gradient
centrifugation. For stimulation, 5 × 106 cells/ml
were cultured for 3 days in Iscove's modified Dulbecco's medium
(IMDM) supplemented with 10% fetal calf serum, penicillin (100 U/ml),
streptomycin (100 µg/ml), and PHA (5 µg/ml). Subsequently, cells
(106/ml) were grown in the absence of PHA, in medium
supplemented with 10 U of recombinant interleukin-2 (Chiron Benelux, BV
Amsterdam, The Netherlands)/ml. The T-cell line H9 was cultured in IMDM
supplemented with 10% fetal calf serum, penicillin (100 U/ml), and
streptomycin (100 µg/ml).
Viruses and neutralizing agents.
The IIIB isolate was a kind
gift of R. Gallo. IIIB variants were reisolated from an accidentally
infected laboratory worker (LW-F) at approximately three (4 May 1988;
isolate fe0233) and seven (7 May 1992; isolate FF3346) years after the
assumed moment of infection (before 1986) (62). All
viruses, including the originally H9-cell-line-adapted IIIB virus, were
propagated on PHA-stimulated PBMC. Each week, virus production in the
supernatant was monitored by an in-house p24 antigen capture ELISA
(58). If sufficient p24 antigen production could be
demonstrated, the titer of the virus stock was quantified by
determination of the 50% tissue culture infectious dose
(TCID50) on PHA-stimulated healthy donor PBMC.
Viruses were tested for their relative neutralization sensitivity
against increasing concentrations of recombinant soluble CD4 (sCD4),
HIV-1 immune globulin (HIVIg), human sera Amshps, and the
monoclonal antibodies (MAb) gp13, gp68, IgG1b12, F105, 902, 1577, and
2F5. In short, HIVIg is a preparation of purified polyclonal Ig derived
from HIV-infected donors; Amshps consists of pooled
plasma of 34 patients from the Amsterdam Cohort studies on AIDS and
HIV-1 infection. The gp13, gp68, and F105 antibodies recognize epitopes
surrounding the CD4bs of gp120 (49, 55), IgG1b12
recognizes the CD4bs of gp120 (9), and the antibody 902 reacts with the immunodominant hypervariable loop of gp120 (17) and the gp41-directed antibodies CHO 2F5 (epitope
ELDKWA; amino acids 662 to 667 of BH10 gp160) and 1577 (region 735 to 752 of IIIB) (8, 21).
Neutralization sensitivity of HIV-1 variants.
From each
virus isolate, an inoculum of 100 TCID50/ml in a 100-µl
final volume was incubated for 1 to 2 h at 37°C with increasing concentrations of the neutralizing agents. Subsequently, the mixtures of virus with sCD4, sera, or antibodies were added to 105
3-day-stimulated human PBMC in 96-well microtiter plates. The same
mixtures of human PHA-stimulated PBMC were used to grow virus stocks
and to determine virus titers. The following day, plates incubated with
HIVIg or Amshps were washed extensively. On days 7 and 14, virus production in supernatants was analyzed in an in-house p24
antigen capture ELISA. Means of quadruplicate experiments of each
agent, tested at least twice, were plotted. Percent neutralization was
calculated by determining the reduction in p24 production in the
presence of the agent compared to that for the cultures with virus
only. When possible, 50% (IC50) and 90%
(IC90) inhibitory concentrations were determined by linear regression.
Determination of virus coreceptor usage and cell tropism.
U87 cells stably expressing CD4 alone or in combination with CCR5 or
CXCR4 (a kind gift of D. Littman) were seeded at 104 cells
per well in 96-well plates in IMDM supplemented with 5 µg of
Polybrene/ml and 1 µg of puromycin/ml. Occasionally 200 µg of
G418/ml was added to select for CD4-expressing cells. The next day,
cells were washed with phosphate-buffered saline, and 102
to 104 TCID50 of virus/ml was added in a
100-µl final volume. After 24 h, cells were washed twice with
phosphate-buffered saline and 200 µl of fresh medium was added.
Supernatants were harvested on days 7, 14, and 21 and tested for the
presence of p24 antigen in an in-house ELISA.
Replication in macrophages was determined as described previously
(
25). In brief, PBMC were obtained from heparinized venous
blood by Percoll density gradient. The monocyte fraction was purified
by centrifugal elutriation. Monocytes were cultured for 5 days
at a
cell concentration of 10
6 monocytes/ml in IMDM supplemented
with 10% human pooled serum,
penicillin (100 U/ml), and streptomycin
(100 µg/ml) in 24-well
plates.
DNA isolation, PCR, and sequence analysis.
Total DNA from
PBMC infected with the HIV-1 variants under study was isolated as
described previously (6). PCR amplification of the
complete envelope gene was performed using primer TB/3 (5'-GGCCTTATTAGGACACATAGTTAGCC-3') (positions relative to
the HXB2D proviral genome: nucleotides 5405 to 5430) and TB/C
(5'-GCTGCCTTGTAAGTCATTGGTCTTAAAGG-3') (nucleotides 9018 to
9046) using a mixture of Taq DNA and Pwo DNA
polymerases (Expand High Fidelity; Boehringer Mannheim). All reactions
were performed in the presence of 15 mM MgCl2 and 5 mM
deoxynucleoside triphosphate (dNTP). Thermo-cycling conditions were the
following: 2 min 30 s at 94°C once, 15 s at 94°C, 45 s at 50°C (2°C/sec slope), 6 min at 68°C repeated 10 times,
followed by 30 times of the same program at 53°C and subsequently an
additional 10-min extension at 68°C. PCR products were purified with
a QIAquick PCR purification kit (Qiagen, Hilden, Germany). The
gp120-gp41 region of the HIV envelope gene was completely sequenced
with Dye terminator cycle sequencing with Ampli Taq DNA
polymerase, FS (Perkin-Elmer, Applied Biosystems Division, Foster City,
Calif.), performed according to the manufacturer's protocol on an ABI
373S automated sequencer.
Phylogenetic analysis.
From each isolate unambiguous DNA
sequences were obtained, and within the two sequence sets nucleotide
sequences were aligned manually. Phylogenetic analysis was performed by
using the PHYLIP DNADIST and NEIGHBOR software (22), based
on the Kimura two-parameter distance estimation method with the HIV-1
MN sequence as an out-group. For both sequence sets, the bootstrap
analysis was performed using SEQBOOT and CONSENSE (100 replicates).
Synonymous (Ds) and nonsynonymous (Dn) distances were calculated by using the MEGA
software (26) as previously described.
 |
RESULTS |
Sensitivity to neutralization of IIIB and the LW-F isolates.
From a laboratory worker who accidentally was infected in 1985 with
IIIB (62), HIV variants that were isolated in 1988 (fe0233) and 1992 (FF3346) were used in this study. Viruses were
isolated by coculture with PHA-stimulated PBMC. These HIV isolates have not been passaged through T-cell lines unless specifically indicated.
First the sensitivities of IIIB, fe0233, and FF3346 to neutralization
by recombinant sCD4 were compared. The IC
50 and
IC
90 of sCD4 for FF3346 were 26 and 54 µg/ml,
respectively. A 10- to
15-fold-lower level of resistance to
neutralization by sCD4 was
observed for IIIB and isolate fe0233, which
showed IC
50 and IC
90 values ranging from 2 to 8 µg of sCD4/ml for IIIB and 2 to 13
µg of sCD4/ml for fe0233 (Fig.
1a). The sensitivity of IIIB to
sCD4
neutralization after adaptation to replicate on human PBMC
was not
different from that of the original H9-adapted IIIB virus
(data not
shown). Passage of FF3346 through the H9 T-cell line
resulted in a
neutralization-sensitive T-cell-line-adapted phenotype
with an
IC
50 and IC
90 of sCD4 comparable to those
observed for
IIIB and fe0233 (data not shown). Subsequently the
sensitivity
to neutralization by two polyclonal anti-HIV-1 sera, HIVIg
and
Ams
hps, was tested (Fig.
1b). Again, FF3346 was
relatively neutralization
resistant, with 50 and 90% inhibition at
serum dilutions of 1:110
and 1:68 for HIVIg and 1:85 and 1:65 for
Ams
hps, respectively. These dilutions were about fivefold
lower than
those required for neutralization of IIIB (50 and 90%
neutralization
at serum dilutions of 1:600 and 1:115 for HIVIg and
1:600 and
1:275 for Ams
hps, respectively). Compared to IIIB
and FF3346, isolate fe0233 showed
an intermediate
neutralization-sensitive phenotype, with 50 and
90% neutralization at
serum dilutions of 1:175 and 1:70 for HIVIg
and 1:200 and 1:100 for
Ams
hps.

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FIG. 1.
Neutralization sensitivity of HIV-IIIB and LW-F isolates
as determined on human PHA-stimulated PBMC. Of the tested viruses,
HIV-IIIB ( ), fe0233 ( ), and FF3346( ), 100 TCID50/ml was incubated with increasing concentrations of
recombinant sCD4 (a), polyclonal pooled serum of HIV-1-infected
patients (HIVIg and Amshps) (b), anti-CD4 binding
site-directed MAbs (IgG1b12, 902, gp13, gp68, and F105) (c), and
anti-gp41 MAbs 2F5 and 1577 (d). In the neutralization assay, p24 was
measured, and mean optical densities (OD) were calculated from
quadruplicate cultures from at least duplicate experiments. The percent
neutralization was calculated by determining the reduction in
supernatant p24 production in the presence of the neutralizing agent
relative to that for control cultures lacking these agents.
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Next, a panel of monoclonal antibodies was used for further
characterization of the neutralization sensitivity of IIIB, fe0233,
and
FF3346. The IgG1b12 antibody, which recognizes a conserved
epitope in
the CD4 binding site, indeed, like sCD4, neutralized
IIIB at an
IC
50 and IC
90 of 0.7 and 0.9 µg/ml,
respectively, and
neutralized fe0233 at an IC
50 of 1.5 and
an IC
90 of 1.7 µg/ml
(Fig.
1c). Although IgG1b12 has been
reported to be capable of
neutralizing many primary viruses (
9,
33), FF3346 was relatively
resistant (IC
50 and
IC
90 of 15 and 31 µg/ml respectively). The
gp68, gp13,
and F105 monoclonal antibodies, which all recognize
amino acid residues
surrounding the CD4 binding cavity, could
neutralize IIIB only with
IC
50 values between 1.0 and 7.0 µg/ml
and
IC
90 values between 22 and 65 µg/ml. The same phenomenon
was
seen for the monoclonal antibody 902, which recognizes the
hypervariable
immunodominant loop of HIV-1 (Fig.
1c). Neutralization
with antibodies
against gp41 (1577 and 2F5) (Fig.
1d) was not different
among
the three HIV-1 isolates. Although there was a tendency towards
a
more neutralization-resistant phenotype for the two LW-F isolates,
IIIB
was also relatively resistant at the concentrations tested.
These
results suggest ongoing evolutionary progression towards
an increased
resistance to neutralization within the CD4 binding
region of the gp120
envelope
protein.
Phylogenetic and sequence analysis.
Sequence analysis of the
nucleotides spanning the gp120 envelope region and subsequent
phylogenetic analysis showed that fe0233 and FF3346 clustered together
with HXB2D, BH10, PV22, and LW90-2 (GenBank accession no. K03455,
M15654, K02083, and U12053, respectively) (Fig.
2). BH10 and PV22 are H9/HTLV-III
proviral DNA clones, and LW90-2 is another isolate from LW-F (isolated in 1990) from which the complete envelope genome was sequenced (50). Genetic distances between the IIIB isolate and the
two LW-F isolates never exceeded 3%, indicative of their close
relatedness (data not shown). We next analyzed changes in the deduced
amino acid sequence of gp120 that could be associated with the observed phenotypic changes in the viruses isolated from the laboratory worker
(Fig. 3). Amino acid substitutions in
fe0233 and FF3346 were observed mainly in the variable regions of gp120
and in the loop region of gp41. Both V3 and potential N-linked
glycosylation sites in gp120 have been implicated in biological
properties of HIV-1 (13, 65). Despite the high number of
five amino acid substitutions in V3, only one (Arg-Gly 304) resulted in
a change of the overall charge (
1) of the V3 loop in fe0233 and
FF3346. However, the fe0233 and FF3346 V3 loops still had a charge of +8, compatible with their restricted CXCR4 coreceptor use
(23). In agreement with the preserved syncytium-inducing
(SI) phenotype, there was a positively charged amino acid residue at
position 311 in all three viruses. We were able to confirm a mutation
in the highly antigenic GPGRAF sequence in the top of the V3 loop, which was already found 1 year after infection (20). The
overall charge of the V2 loop was also reduced (
2) in isolates fe0233 and FF3346 compared to that in isolate IIIB. In isolate FF3346, two
potential N-linked glycosylation sites were lost (positions 289 and
674). In addition, the two amino acid substitutions Val-Ala 275 and
Ala-Val 281 may redirect the glycoprotein moiety on the Asp at position
276, which could influence the accessibility of the underlying CD4
binding cavity. The importance of this specific N-linked glycosylation
site in neutralization sensitivity has been described previously
(13).

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FIG. 2.
Phylogenetic analysis of complete HIV envelope sequences
of the HXB2D and LW-F isolates. Included are two other IIIB-related
sequences, BH10 (M15654) and PV22 (K02083), respectively, and an LW-F
clone named LW90-2 (U12053) from which the envelope sequence was
determined previously (50). The phylogenetic tree was
constructed with the neighbor-joining, Kimura two-parameter distance
estimation method. The MN branch is truncated to facilitate
presentation and was used as an outgroup.
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FIG. 3.
Sequence of the parental HXB2D and the two reisolated
LW-F isolates. The predicted amino acid sequences of the envelope
glycoproteins of the fe0233 and FF3346 viruses, based on the consensus
sequence of the Env fragment amplified from infected human PBMC, are
aligned with the HXB2D sequence. Differences in amino acid residues are
indicated. The start sites of gp120 and gp41 are shown, as are the
locations of the different gp120 regions.
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A relatively high number of amino acid substitutions in the LW-F
isolates compared to the IIIB isolate were present in the
so-called
anti-hotspots (
27,
65). These surface-accessible
residues
are located adjacent to amino acids that are directly
involved in CD4
binding and are positioned mainly in the constant
regions C2, C3, and
C4 but also in V5. Two amino acid residues
that are directly involved
in CD4 binding were also changed (Ala-Val
281 in fe0233 and FF3346;
Glu-Ala 370 in FF3346). Amino acid residues
in C1, C4, and C5 of gp120
that are involved in the noncovalent
association between gp120 and gp41
were preserved in all three
isolates. In addition, we observed a
recovery of the VPR open
reading frame, which underscores the
importance of VPR for viral
replication in primary cells (data not
shown). Finally we analyzed
whether the sequence changes were due to
selective immune pressure
or random mutations. This was analyzed by
calculating the ratio
of synonymous versus nonsynonymous mutations for
gp120, gp41,
and the total envelope sequence (Table
1). A relatively low
Ds/
Dn ratio
(approximately 0.35) suggests positive selection of favorable
amino
acid substitutions, whereas a low level of immune pressure
is
represented by a high ratio (approximately 0.65) (
30). The
Ds/
Dn ratio of 0.57 between isolates IIIB and fe0233 for gp120
was somewhat higher than the
ratio found between fe0233 and FF3346
(
Ds/
Dn = 0.42). In gp41,
Ds/
Dn ratios between
fe0233 and FF3346
were also markedly lower than between IIIB and
fe0233, 0.33 and
1.0, respectively.
Ds/
Dn ratios between
parental HXB2D and isolate
FF3346 showed a relatively normal ratio for
gp120 and the complete
envelope and a low mean
Ds/
Dn ratio for gp41. The
lower ratios
for fe0233 than for FF3346 are indicative of positive
selection
pressure on the virus in the period from 3 to 7 years after
infection,
which is in agreement with the observed changes in
neutralization
sensitivity of the viruses.
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TABLE 1.
Intrahost evolution of HIV-IIIB in the laboratory worker
as determined by the
Ds/Dn ratio based on
synonymous (Ds) and nonsynonymous
(Dn) mutations in different regions of the
envelope genea
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Coreceptor usage and cell tropism.
In recently infected
individuals, the HIV-1 quasispecies in general is very homogeneous,
with a non-syncytium-inducing (NSI) macrophage-tropic phenotype and a
CCR5-restricted coreceptor usage (54). This is also
observed in recipients who were infected by individuals with SI CXCR4
using viruses. In these cases, selective transmission or outgrowth of
NSI HIV-1 occurred, although at least low-level SI virus replication
persisted (61). Cell-free inoculation of 5-day-cultured
monocyte-derived macrophages revealed that isolates fe0233 and FF3346
indeed both had the capacity to replicate in macrophages (Table
2). However, as determined by infection
of the MT2 cell line and microscopic analysis for the appearance of
syncytia, isolates fe0233 and FF3346 were also both classified as
T-cell line tropic and SI. The macrophage tropism of the LW-F viruses
prompted us to analyze their coreceptor usage. U87 cell lines stably
expressing CD4 and CCR5 or CXCR4, the two coreceptors that are
considered most relevant for in vivo HIV infection (66), were inoculated with fe0233 or FF3346. Both isolates established a
productive infection only in the U87/CD4/CXCR4 cell line and lacked the
capacity to use coreceptor CCR5 (Table 2). Although we cannot exclude
the possibility that NSI CCR5 viruses may have been present very early
in infection or coexist as a minor population, our data at least
confirm that CCR5 usage is no prerequisite for macrophage tropism or
neutralization resistance (14, 34, 57, 59).
 |
DISCUSSION |
The neutralization resistance of primary HIV-1 variants is
considered instrumental for HIV-1 persistence in the presence of neutralizing antibodies and HIV-1 pathogenicity in vivo (7, 13,
18, 24, 35, 60). Since all infections are established by primary
neutralization-resistant HIV-1, it has been impossible to conclude
whether neutralization resistance should indeed be considered an escape
mechanism. The unfortunate accidental infection of a laboratory worker
(LW-F) with the TCLA neutralization-sensitive IIIB variant provided the
opportunity to study directly the relevance of HIV-1 neutralization
resistance in vivo. LW-F had a typical clinical course, developing AIDS
within 8 years after infection (62). Comparison of viruses
that were isolated from the laboratory worker 4 and 7 years after
infection showed a gradual loss of HIV neutralization sensitivity,
preceding clinical progression to AIDS. Based on this observation, we
conclude that the neutralization resistance of HIV may be considered an
escape mechanism from humoral immunity. The clinical relevance of HIV-1
neutralization resistance is in line with our finding that a IIIB
variant reisolated from an experimentally infected chimpanzee after 10 years of asymptomatic HIV infection was still sensitive to
neutralization by CD4-binding-site-directed antibodies and sCD4
(5). Symptom-free follow-up of this animal has now
extended to more than 18 years. It is remarkable that the
neutralization-sensitive IIIB virus could persist in LW-F, since
steadily increasing and broadening antibody responses against the gp160
protein and IIIB-derived V3 peptides were demonstrated even 5 years
after infection (45). Moreover, a strong antibody response
was already measured in serum 1 year after infection (37,
42), and neutralizing activity in serum against TCLA viruses was
demonstrated between 3 and 5 years after infection (45, 46,
50). However, since binding to monomeric gp120 in a CD4 binding
inhibition assay or neutralization against TCLA isolates is not a
relevant quantification for neutralizing activity (37, 38,
42), it may be possible that titers of neutralizing antibody
were absent or at least too low to fully suppress viral replication.
Other mechanisms to escape humoral immunity have been hypothesized.
HIV-1 macrophage tropism may be critical for viral replication in the
presence of neutralizing antibodies in vivo (52).
Spreading of virus during close cell-cell contact, which frequently
occurs between macrophages and T cells, would prevent a cell-free state during which HIV-1 otherwise would be vulnerable to neutralizing antibodies and would select for macrophage-tropic HIV-1. In support of
this is the macrophage tropism of the LW-F isolates which, however, did
not coincide with the capacity to use coreceptor CCR5.
Although not sufficient to suppress virus replication, even a modest
autologous neutralizing antibody response may have been sufficient to
drive evolution of the IIIB variants in LW-F towards neutralization
resistance. Comparison of the synonymous versus nonsynonymous mutations
between HXB2D and fe0233 and between fe0233 and FF3346 indeed pointed
to an increasing selection pressure on the virus, which may be humoral
immunity (45). The impact of the increasing selection
pressure was most pronounced in gp41, as can be concluded from the low
Ds/Dn ratio of 0.33 for
this region (29, 30). We did not observe a change in
neutralization sensitivity for two gp41-directed antibodies, and in
agreement there were no mutations in their respective epitopes. We
cannot exclude the possibility that antibodies directed against the
region in gp41 that shows nonsilent mutations may have been present in vivo, although the level of gp41 antibodies is generally considered to
be very low. In addition, only part of the region in gp41 with the high
number of positively selected mutations may be accessible to
antibodies, which makes antibody-mediated selection unlikely. Therefore, an alternative explanation for the positive selection of the
gp41 mutations could be that the positively selected gp41 mutations
contribute to a favorable configuration of the gp41-gp120 complex
(3, 16, 43, 63).
A relationship between the presence of HIV-specific humoral immunity
and delayed or even absent disease progression has been suggested by
several studies (10-12, 41, 44). A progressive disease
course in the presence of neutralizing antibodies was in most studies
attributed to the emergence of viral escape mutants (1, 7, 18,
24, 28, 36, 37, 60). The LW-F viruses had gained a broad
neutralization resistance against immune sera from HIV-infected
patients, sCD4, and different antibodies. The molecular basis for
neutralization resistance of primary HIV-1 is still unknown. With
knowledge of the mechanism of neutralization resistance, we may be able
to circumvent it, opening up new therapeutic strategies.
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ACKNOWLEDGMENTS |
We thank Ray Sweet (Smithkline Beecham) for kindly providing
recombinant soluble CD4 and Alfred Prince for HIVIg. Amshps
was obtained from Jaap Goudsmit. The human monoclonal antibodies gp13
and gp68 were a kind gift of Martin Schutten. IgG1b12 was kindly
provided by Paul Parren and Dennis Burton. The 1577 gp41 MAb and 2F5
were obtained through the AIDS Research and Reference Reagent Program,
NIH, contributed by M. Ferguson and H. Katinger, respectively. For
critically reading the manuscript and helpful discussion, we thank
Frank Miedema and Rene van Lier.
This work was supported by The Dutch AIDS Foundation grant number 1304.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: CLB Sanquin,
Plesmanlaan 125, 1066 CX Amsterdam, The Netherlands. Phone: 31 20 5123317. Fax: 31 20 5123310. E-mail:
J_Schuitemaker{at}clb.nl.
 |
REFERENCES |
| 1.
|
Arendrup, M.,
C. Nielsen,
J. E. S. Hansen,
C. Pedersen,
L. Mathiesen, and J. O. Nielsen.
1992.
Autologous HIV-1 neutralizing antibodies: emergence of neutralization resistant escape virus and subsequent development of escape virus neutralizing antibodies.
J. Acquir. Immune Defic. Syndr.
5:303-307.
|
| 2.
|
Baba, T. W.,
V. Liska,
R. Hofmann-Lehmann,
J. Vlasak,
W. Xu,
S. Ayehunie,
L. A. Cavacini,
M. R. Posner,
H. Katinger,
G. Stiegler,
B. J. Bernacky,
T. A. Rizvi,
R. Schmidt,
L. R. Hill,
M. E. Keeling,
Y. Lu,
J. E. Wright,
T.-C. Chou, and R. M. Ruprecht.
2000.
Human neutralizing monoclonal antibodies of the IgG1 subtype protect against mucosal simian-human immunodeficiency virus infection.
Nat. Med.
6:200-206[CrossRef][Medline].
|
| 3.
|
Back, N. K. T.,
L. Smit,
M. Schutten,
P. L. Nara,
M. Tersmette, and J. Goudsmit.
1993.
Mutations in human immunodeficiency virus type 1 gp41 affect sensitivity to neutralization by gp120 antibodies.
J. Virol.
67:6897-6902[Abstract/Free Full Text].
|
| 4.
|
Baldinotti, F.,
D. Matteucci,
P. Mazzetti,
C. Giannelli,
P. Bandecchi,
F. Tozzini, and M. Bendinelli.
1994.
Serum neutralization of feline immunodeficiency virus is markedly dependent on passage history of the virus and host system.
J. Virol.
68:4572-4579[Abstract/Free Full Text].
|
| 5.
|
Beaumont, T.,
S. Broersen,
A. van Nuenen,
H. G. Huisman,
A. M. De Roda Husman,
J. L. Heeney, and H. Schuitemaker.
2000.
Increased neutralization sensitivity and reduced replicative capacity of human immunodeficiency virus type 1 after short-term in vivo or in vitro passage through chimpanzees.
J. Virol.
74:7699-7707[Abstract/Free Full Text].
|
| 6.
|
Boom, R.,
C. J. A. Sol,
M. M. M. Salimans,
C. L. Jansen,
P. M. E. Wertheim-van Dillen, and J. Van der Noordaa.
1991.
A rapid and simple method for purification of nucleic acids.
J. Clin. Microbiol.
28:495-503.
|
| 7.
|
Bradney, A. P.,
S. Scheer,
J. M. Crawford,
S. P. Buchbinder, and D. C. Montefiori.
1999.
Neutralization escape in human immunodeficiency virus type 1-infected long-term nonprogressors.
J. Infect. Dis.
179:1264-1267[CrossRef][Medline].
|
| 8.
|
Buchacher, A.,
R. Predl,
K. Strutzenberger,
A. Steinfellner,
A. Trkola,
M. Purtscher,
G. Gruber,
C. Tauer,
F. Steindl,
A. Jungbauer, and H. Katinger.
1994.
Generation of human monoclonal antibodies against HIV-1 proteins; electrofusion and Epstein-Barr virus transformation for peripheral blood lymphocyte immortalization.
AIDS Res. Hum. Retrovir.
10:359-369[Medline].
|
| 9.
|
Burton, D. R.,
J. Pyati,
R. Koduri,
S. J. Sharp,
G. B. Thornton,
P. W. H. Parren,
L. S. W. Sawyer,
R. M. Hendry,
N. Dunlop,
P. L. Nara,
M. Lamacchia,
E. M. Garratty,
E. R. Stiehm,
Y. J. Bryson,
Y. Cao,
J. P. Moore,
D. D. Ho, and C. F. Barbas, III.
1994.
Efficient neutralization of primary isolates of HIV-1 by a recombinant human monoclonal antibody.
Science
266:1024-1027[Abstract/Free Full Text].
|
| 10.
|
Cao, Y.,
L. Qin,
L. Zhang,
J. T. Safrit, and D. D. Ho.
1995.
Virologic and immunologic characterization of long-term survivors of human immunodeficiency virus type 1 infection.
N. Engl. J. Med.
332:201-208[Abstract/Free Full Text].
|
| 11.
|
Carotenuto, P.,
D. Looij,
L. Keldermans,
F. De Wolf, and J. Goudsmit.
1998.
Neutralizing antibodies are positively associated with CD4+ T-cell counts and T-cell function in long term AIDS-free infection.
AIDS
12:1591-1600[CrossRef][Medline].
|
| 12.
|
Cavacini, L. A.,
J. E. Peterson,
E. Nappi,
M. Duval,
R. Goldstein,
K. Mayer, and M. R. Posner.
1999.
Minimal incidence of serum antibodies reactive with intact primary isolate virions in human immunodeficiency virus type 1-infected individuals.
J. Virol
73:9638-9641[Abstract/Free Full Text].
|
| 13.
|
Cayabyab, M.,
G. B. Karlsson,
B. A. Etemad-Moghadam,
W. Hofmann,
T. Steenbeke,
M. Halloran,
J. W. Fanton,
M. K. Axthelm,
N. L. Letvin, and J. G. Sodroski.
1999.
Changes in human immunodeficiency virus type 1 envelope glycoproteins responsible for the pathogenicity of a multiply passaged simian-human immunodeficiency virus (SHIV-HXBc2).
J. Virol.
73:976-984[Abstract/Free Full Text].
|
| 14.
|
Cecilia, D.,
V. N. KewalRamani,
J. O'Leary,
B. Volsky,
P. Nyambi,
S. Burda,
S. Xu,
D. R. Littman, and S. Zolla-Pazner.
1998.
Neutralization profiles of primary human immunodeficiency virus type 1 isolates in the context of coreceptor usage.
J. Virol.
72:6988-6996[Abstract/Free Full Text].
|
| 15.
|
Cecilia, D.,
C. A. Kleeberger,
A. Munoz,
J. V. Giorgi, and S. Zolla-Pazner.
1999.
A longitudinal study of neutralizing antibodies and disease progression in HIV-1-infected subjects.
J. Infect. Dis.
176:1365-1374.
|
| 16.
|
Chan, D. C.,
D. Fass,
J. M. Berger, and P. S. Kim.
1997.
Core structure of gp41 from the HIV envelope glycoprotein.
Cell
89:263-273[CrossRef][Medline].
|
| 17.
|
Chesebro, B., and K. Wehrly.
1988.
Development of a sensitive quantitative focal assay for human immunodeficiency virus infectivity.
J. Virol.
62:3779-3788[Abstract/Free Full Text].
|
| 18.
|
Ciurea, A.,
P. Klenerman,
L. Hunziker,
E. Horvath,
M. S. Senn,
A. F. Ochsenbein,
H. Hengartner, and R. M. Zinkernagel.
1999.
Viral persistence in vivo through selection of neutralizing antibody-escape variants.
Proc. Natl. Acad. Sci. USA
97:2749-2754[Abstract/Free Full Text].
|
| 19.
|
Cook, R. F.,
S. L. Berger,
K. E. Rushlow,
J. M. McManus,
S. J. Cook,
S. Harrold,
M. L. Raabe,
R. C. Montelaro, and C. J. Issel.
1995.
Enhanced sensitivity to neutralizing antibodies in a variant of equine infectious anemia virus is linked to amino acid substitutions in the surface unit envelope glycoprotein.
J. Virol.
69:1493-1499[Abstract].
|
| 20.
|
Di Marzo Veronese, F.,
M. S. Reitz, Jr.,
G. Gupta,
M. Robert-Guroff,
C. Boyer-Thompson,
A. Louie,
R. C. Gallo, and P. Lusso.
1993.
Loss of a neutralizing epitope by a spontaneous point mutation in the V3 loop of HIV-1 isolated from an infected laboratory worker.
J. Biol. Chem.
268:25894-25901[Abstract/Free Full Text].
|
| 21.
|
Evans, D. J.,
J. McKeating,
J. M. Meredith,
K. L. Burke,
K. Katrak,
A. John,
M. Ferguson,
P. D. Minor,
R. A. Weiss, and J. W. Almond.
1989.
An engineered poliovirus chimaera elicits broadly reactive HIV-1 neutralizing antibodies.
Nature
339:385-388[CrossRef][Medline].
|
| 22.
|
Felsenstein, J.
1993.
PHYLIP manual version 3.5.
University Herbarium of the University of California at Berkeley.
|
| 23.
|
Fouchier, R. A. M.,
M. Groenink,
N. A. Kootstra,
M. Tersmette,
H. G. Huisman,
F. Miedema, and H. Schuitemaker.
1992.
Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule.
J. Virol.
66:3183-3187[Abstract/Free Full Text].
|
| 24.
|
Kimata, J. T.,
L. Kuller,
D. B. Anderson,
P. Dailey, and J. Overbaugh.
1999.
Emerging cytopathic and antigenic simian immunodeficiency virus variants influence AIDS progression.
Nat. Med.
5:535-541[CrossRef][Medline].
|
| 25.
|
Kitano, K.,
C. N. Abboud,
D. H. Ryan,
S. G. Quan,
G. C. Baldwin, and D. W. Golde.
1991.
Macrophage-active colony-stimulating factors enhance human immunodeficiency virus type 1 infection in bone marrow stem cells.
Blood
77:1699-1705[Abstract/Free Full Text].
|
| 26.
|
Kumar, S.,
K. Tamura, and M. Nei.
1994.
MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers.
CABIOS
10:189-192[Abstract/Free Full Text].
|
| 27.
|
Kwong, P. D.,
R. Wyatt,
J. Robinson,
R. W. Sweet,
J. Sodroski, and W. A. Hendrickson.
1998.
Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody.
Nature
393:648-659[CrossRef][Medline].
|
| 28.
|
Lewis, J.,
P. Balfe,
C. Arnold,
S. Kaye,
R. S. Tedder, and J. A. McKeating.
1998.
Development of a neutralizing antibody response during acute primary human immunodeficiency virus type 1 infection and the emergence of antigenic variants.
J. Virol.
72:8943-8951[Abstract/Free Full Text].
|
| 29.
|
Lukashov, V. V., and J. Goudsmit.
1995.
Increasing genotype and phenotypic selection from the original genomic RNA populations of HIV-1 strains LAI and MN (NM) by peripheral blood mononuclear cell culture, B-cell-line propagation and T-cell-line adaptation.
AIDS
9:1307-1311[Medline].
|
| 30.
|
Lukashov, V. V.,
C. L. Kuiken, and J. Goudsmit.
1995.
Intrahost human immunodeficiency virus type 1 evolution is related to the length of the immunocompetent period.
J. Virol.
69:6911-6916[Abstract].
|
| 31.
|
Mascola, J. R.,
G. Stiegler,
T. C. VanCott,
H. Katinger,
C. B. Carpenter,
C. E. Hanson,
H. Beary,
D. Hayes,
S. S. Frankel,
D. L. Birx, and M. G. Lewis.
2000.
Protection of macaques against vaginal transmission of a pathogenic HIV-1/SIV chimeric virus by passive infusion of neutralizing antibodies.
Nat. Med.
6:207-210[CrossRef][Medline].
|
| 32.
|
Means, R. E.,
T. Greenough, and R. C. Desrosiers.
1997.
Neutralization sensitivity of cell culture-passaged simian immunodeficiency virus.
J. Virol.
71:7895-7902[Abstract].
|
| 33.
|
Mo, H.,
L. Stamatatos,
J. E. Ip,
C. F. Barbas,
P. W. H. I. Parren,
D. R. Burton,
J. P. Moore, and D. D. Ho.
1997.
Human immunodeficiency virus type 1 mutants that escape neutralization by human monoclonal antibody IgG1b12.
J. Virol.
71:6869-6874[Abstract].
|
| 34.
|
Montefiori, D. C.,
R. G. Collman,
T. R. Fouts,
J. Y. Zhou,
M. Bilska,
J. A. Hoxie,
J. P. Moore, and D. P. Bolognesi.
1998.
Evidence that antibody-mediated neutralization of human immunodeficiency virus type 1 by sera from infected individuals is independent of coreceptor usage.
J. Virol.
72:1886-1893[Abstract/Free Full Text].
|
| 35.
|
Montefiori, D. C.,
I. Y. Zhou,
B. Barnes,
D. Lake,
E. M. Hersh,
Y. Masuho, and L. B. J. Lefkowitz.
1991.
Homotypic antibody responses to fresh clinical isolates of human immunodeficiency virus.
Virology
182:635-643[CrossRef][Medline].
|
| 36.
|
Moog, C.,
H. J. A. Fleury,
I. Pellegrin,
A. Kirn, and A. M. Aubertin.
1997.
Autologous and heterologous neutralizing antibody responses following initial seroconversion in human immunodeficiency virus type 1-infected individuals.
J. Virol.
71:3734-3741[Abstract].
|
| 37.
|
Moore, J. P.,
Y. Cao,
D. D. Ho, and R. A. Koup.
1994.
Development of the anti-gp120 antibody response during seroconversion to human immunodeficiency virus type 1.
J. Virol.
68:5142-5155[Abstract/Free Full Text].
|
| 38.
|
Moore, J. P., and D. D. Ho.
1995.
HIV-1 neutralization: the consequences of viral adaptation to growth on transformed T cells.
AIDS
9(Suppl. A):S117-S136.
|
| 39.
|
Ogg, G. S.,
X. Jin,
S. Bonhoeffer,
P. D. Dunbar,
M. Nowak,
S. Monard,
J. P. Segal,
Y. Cao,
S. L. Rowland-Jones,
V. Cerundolo,
A. Hurley,
M. Markovits,
D. D. Ho,
D. F. Nixon, and A. J. McMichael.
1998.
Quantitation of HIV-1-specific cytotoxic T lymphocytes and plasma load of viral RNA.
Science
279:2103-2106[Abstract/Free Full Text].
|
| 40.
|
Ogg, G. S.,
S. Kostense,
M. R. Klein,
S. Jurriaans,
D. Hamann,
A. J. McMichael, and F. Miedema.
1999.
Longitudinal phenotypic analysis of human immunodeficiency virus type 1-specific T lymphocytes: correlation with disease progression.
J. Virol.
73:9153-9160[Abstract/Free Full Text].
|
| 41.
|
Pantaleo, G.,
S. Menzo,
M. Vaccarezza,
C. Graziosi,
O. J. Cohen,
J. F. Demarest,
D. Montefiori,
J. M. Orenstein,
C. Fox,
L. K. Schrager,
J. B. Margolick,
S. P. Buchbinder,
J. V. Giorgi, and A. S. Fauci.
1995.
Studies in subjects with long-term nonprogressive human immunodeficiency virus infection.
N. Engl. J. Med.
332:209-216[Abstract/Free Full Text].
|
| 42.
|
Parren, P. W. H. I.,
J. P. Moore,
D. R. Burton, and Q. J. Sattentau.
1999.
The neutralizing antibody response to HIV-1: viral evasion and escape from humoral immunity.
AIDS
13(Suppl. A):S137-S162.
|
| 43.
|
Perrin, C.,
E. Fenouillet, and I. M. Jones.
1998.
Role of glycosylation sites in the biological activity of human immunodeficiency virus type 1 envelope glycoprotein.
Virology
242:338-345[CrossRef][Medline].
|
| 44.
|
Pilgrim, A. K.,
G. Pantaleo,
O. J. Cohen,
L. M. Fink,
J. Y. Zhou,
J. T. Zhou,
D. P. Bolognesi,
A. S. Fauci, and D. C. Montefiori.
1997.
Neutralizing antibody responses to human immunodeficiency virus type 1 in primary infection and long-term-nonprogressive infection.
J. Infect. Dis.
176:924-932[Medline].
|
| 45.
|
Pincus, S. H.,
K. G. Messer,
P. L. Nara,
W. A. Blattner,
G. Colclough, and M. Reitz.
1994.
Temporal analysis of the antibody response to HIV envelope protein in HIV-infected laboratory workers.
J. Clin. Investig.
93:2505-2513.
|
| 46.
|
Pincus, S. H.,
K. G. Messer,
D. H. Schwartz,
G. K. Lewis,
B. S. Graham,
W. A. Blattner, and G. Fisher.
1993.
Differences in the antibody response to human immunodeficiency virus-1 envelope glycoprotein (gp160) in infected laboratory workers and vaccines.
J. Clin. Investig.
91:1987-1996.
|
| 47.
|
Poignard, P.,
R. Sabbe,
G. R. Picchio,
M. Wang,
R. J. Gulizia,
H. Katinger,
P. W. H. I. Parren,
D. E. Mosier, and D. R. Burton.
1999.
Neutralizing antibodies have limited effects on the control of established HIV-1 infection in vivo.
Immunity
10:431-438[CrossRef][Medline].
|
| 48.
|
Pontesilli, O.,
M. R. Klein,
S. R. Kerkhof-Garde,
N. G. Pakker,
F. De Wolf,
H. Schuitemaker, and F. Miedema.
1998.
Longitudinal analysis of human immunodeficiency virus type 1-specific cytotoxic T lymphocyte responses: a predominant gag-specific response is associated with non-progressive infection.
J. Infect. Dis.
178:1008-1018[Medline].
|
| 49.
|
Posner, M. R.,
T. Hideshima,
T. Cannon,
M. Mukherjee,
K. H. Mayer, and R. A. Byrn.
1991.
An IgG human monoclonal antibody that reacts with HIV-1/gp120, inhibits virus binding to cells, and neutralizes infection.
J. Immunol.
146:4325-4332[Abstract].
|
| 50.
|
Reitz, M. S., Jr.,
L. Hall,
M. Robert-Guroff,
J. Lautenberger,
B. M. Hahn,
G. M. Shaw,
L. I. Kong,
S. H. Weiss,
D. Waters,
R. C. Gallo, and W. Blattner.
1994.
Viral variability and serum antibody response in a laboratory worker infected with the HIV type 1 (HTLV type IIIB).
AIDS Res. Hum. Retrovir.
10:1143-1155[Medline].
|
| 51.
|
Sawyer, L. S. W.,
M. T. Wrin,
L. Crawford-Mikza,
B. Potts,
Y. Wu,
P. A. Weber,
R. D. Alfonso, and C. V. Hanson.
1994.
Neutralization sensitivity of human immunodeficiency virus type 1 is determined in part by the cell in which the virus is propagated.
J. Virol.
68:1342-1349[Abstract/Free Full Text].
|
| 52.
|
Schuitemaker, H.
1994.
Macrophage-tropic HIV-1 variants: initiators of infection and AIDS pathogenesis?
J. Leukoc. Biol.
56:218-224[Abstract].
|
| 53.
|
Schuitemaker, H.,
M. Koot,
N. A. Kootstra,
M. W. Dercksen,
R. E. Y. De Goede,
R. P. Van Steenwijk,
J. M. A. Lange,
J. K. M. Eeftink Schattenkerk,
F. Miedema, and M. Tersmette.
1992.
Biological phenotype of human immunodeficiency virus type 1 clones at different stages of infection: progression of disease is associated with a shift from monocytotropic to T-cell-tropic virus populations.
J. Virol.
66:1354-1360[Abstract/Free Full Text].
|
| 54.
|
Schuitemaker, H.,
N. A. Kootstra,
R. E. Y. De Goede,
F. De Wolf,
F. Miedema, and M. Tersmette.
1991.
Monocytotropic human immunodeficiency virus 1 (HIV-1) variants detectable in all stages of HIV infection lack T-cell line tropism and syncytium-inducing ability in primary T-cell culture.
J. Virol.
65:356-363[Abstract/Free Full Text].
|
| 55.
|
Schutten, M.,
A. McKnight,
R. C. Huisman,
M. Thali,
J. A. McKeating,
J. Sodroski,
J. Goudsmit, and A. D. Osterhaus.
1993.
Further characterization of an antigenic site of HIV-1 gp120 recognized by virus neutralizing human monoclonal antibodies.
AIDS
7:919-923[Medline].
|
| 56.
|
Shibata, R.,
T. Igarashi,
N. Haigwood,
A. Buckler-White,
R. Ogert,
W. Ross,
R. Willey,
M. W. Cho, and M. A. Martin.
1999.
Neutralizing antibody directed against the HIV-1 envelope glycoprotein can completely block HIV-1/SIV chimeric virus infection of macaque monkeys.
Nat. Med.
5:204-210[CrossRef][Medline].
|
| 57.
|
Simmons, G.,
J. D. Reeves,
A. McKnight,
N. Dejucq,
S. Hibbits,
C. A. Power,
E. Aarons,
D. Schols,
E. De Clercq,
A. E. I. Proudfoot, and P. R. Clapham.
1998.
CXCR4 as a functional coreceptor for human immunodeficiency virus type 1 infection of primary macrophages.
J. Virol.
72:8453-8457[Abstract/Free Full Text].
|
| 58.
|
Tersmette, M.,
I. N. Winkel,
M. Groenink,
R. A. Gruters,
P. Spence,
E. Saman,
G. van der Groen,
F. Miedema, and J. G. Huisman.
1989.
Detection and subtyping of HIV-1 isolates with a panel of characterized monoclonal antibodies to HIV-p24 gag.
Virology
171:149-155[CrossRef][Medline].
|
| 59.
|
Trkola, A.,
T. Ketas,
V. N. KewalRamani,
F. Endorf,
J. M. Binley,
H. Katinger,
J. Robinson,
D. R. Littman, and J. P. Moore.
1998.
Neutralization sensitivity of human immunodeficiency virus type 1 primary isolates to antibodies and CD4-based reagents is independent of coreceptor usage.
J. Virol.
72:1876-1885[Abstract/Free Full Text].
|
| 60.
|
Tsang, M. L.,
L. A. Evans,
P. McQueen,
L. Hurren,
C. Byrne,
R. Penny,
B. Tindall, and D. A. Cooper.
1994.
Neutralizing antibodies against sequential autologous human immunodeficiency virus type 1 isolates after seroconversion.
J. Infect. Dis.
170:1141-1147[Medline].
|
| 61.
|
Van't Wout, A. B.,
N. A. Kootstra,
G. A. Mulder-Kampinga,
N. Albrecht-van Lent,
H. J. Scherpbier,
J. Veenstra,
K. Boer,
R. A. Coutinho,
F. Miedema, and H. Schuitemaker.
1994.
Macrophage-tropic variants initiate human immunodeficiency virus type 1 infection after sexual, parenteral and vertical transmission.
J. Clin. Investig.
94:2060-2067.
|
| 62.
|
Weiss, S. H.,
J. J. Goedert,
S. Gartner,
M. Popovic,
D. Waters,
P. Markham,
F. Di Marzo Veronese,
M. H. Gail,
W. E. Barkley,
J. Gibbons,
F. A. Gill,
M. Leuther,
G. M. Shaw,
R. C. Gallo, and W. A. Blattner.
1988.
Risk of human immunodeficiency virus (HIV-1) infection among laboratory workers.
Science
239:68-71[Abstract/Free Full Text].
|
| 63.
|
Weissenhorn, W.,
A. Dessen,
S. C. Harrison,
J. J. Skehel, and D. C. Wiley.
1997.
Atomic structure of the ectodomain from HIV-1 gp41.
Nature
387:426-430[CrossRef][Medline].
|
| 64.
|
Wrin, T.,
T. Loh,
J. Charron Vennari,
H. Schuitemaker, and J. H. Nunberg.
1995.
Adaptation to persistent growth in the H9 cell line renders a primary isolate of human immunodeficiency virus type 1 sensitive to neutralization by vaccine sera.
J. Virol.
69:39-48[Abstract].
|
| 65.
|
Wyatt, R.,
P. D. Kwong,
E. Desjardins,
R. W. Sweet,
J. Robinson,
W. A. Hendrickson, and J. Sodroski.
1998.
The antigenic structure of the HIV gp120 envelope protein.
Nature
393:705-711[CrossRef][Medline].
|
| 66.
|
Zhang, Y.-J., and J. P. Moore.
1999.
Will multiple coreceptors need to be targeted by inhibitors of human immunodeficiency virus type 1?
J. Virol.
73:3443-3448[Abstract/Free Full Text].
|
Journal of Virology, March 2001, p. 2246-2252, Vol. 75, No. 5
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.5.2246-2252.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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Pistello, M., Matteucci, D., Giannecchini, S., Bonci, F., Sichi, O., Presciuttini, S., Bendinelli, M.
(2003). Evolution of Two Amino Acid Positions Governing Broad Neutralization Resistance in a Strain of Feline Immunodeficiency Virus over 7 Years of Persistence in Cats. CVI
10: 1109-1116
[Abstract]
[Full Text]
-
Herrera, C., Spenlehauer, C., Fung, M. S., Burton, D. R., Beddows, S., Moore, J. P.
(2002). Nonneutralizing Antibodies to the CD4-Binding Site on the gp120 Subunit of Human Immunodeficiency Virus Type 1 Do Not Interfere with the Activity of a Neutralizing Antibody against the Same Site. J. Virol.
77: 1084-1091
[Abstract]
[Full Text]
-
Howe, L., Leroux, C., Issel, C. J., Montelaro, R. C.
(2002). Equine Infectious Anemia Virus Envelope Evolution In Vivo during Persistent Infection Progressively Increases Resistance to In Vitro Serum Antibody Neutralization as a Dominant Phenotype. J. Virol.
76: 10588-10597
[Abstract]
[Full Text]
-
Hofmann-Lehmann, R., Vlasak, J., Chenine, A.-L., Li, P.-L., Baba, T. W., Montefiori, D. C., McClure, H. M., Anderson, D. C., Ruprecht, R. M.
(2002). Molecular Evolution of Human Immunodeficiency Virus env in Humans and Monkeys: Similar Patterns Occur during Natural Disease Progression or Rapid Virus Passage. J. Virol.
76: 5278-5284
[Abstract]
[Full Text]
-
Miller, E. D., Duus, K. M., Townsend, M., Yi, Y., Collman, R., Reitz, M., Su, L.
(2001). Human Immunodeficiency Virus Type 1 IIIB Selected for Replication In Vivo Exhibits Increased Envelope Glycoproteins in Virions without Alteration in Coreceptor Usage: Separation of In Vivo Replication from Macrophage Tropism. J. Virol.
75: 8498-8506
[Abstract]
[Full Text]
-
Giannecchini, S., Matteucci, D., Ferrari, A., Pistello, M., Bendinelli, M.
(2001). Feline Immunodeficiency Virus-Infected Cat Sera Associated with the Development of Broad Neutralization Resistance In Vivo Drive Similar Reversions In Vitro. J. Virol.
75: 8868-8873
[Abstract]
[Full Text]