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Journal of Virology, November 2001, p. 10630-10642, Vol. 75, No. 22
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.22.10630-10642.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
A Short Sequence within Domain C of Duck
Carboxypeptidase D Is Critical for Duck Hepatitis B Virus Binding and
Determines Host Specificity
Hans Christian
Spangenberg,1,
Hong Bock
Lee,1
Jisu
Li,1
Fulong
Tan,2
Randal
Skidgel,2
Jack R.
Wands,1 and
Shuping
Tong1,*
Liver Research Center, Rhode Island Hospital
and Brown University School of Medicine, Providence, Rhode Island
02903,1 and Department of Pharmacology,
University of Illinois College of Medicine at Chicago, Chicago,
Illinois 606122
Received 13 April 2001/Accepted 9 August 2001
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ABSTRACT |
Virus-cell surface receptor interactions are of major interest.
Hepadnaviruses are a family of partially double-stranded DNA viruses
with liver tropism and a narrow host range of susceptibility to
infection. At least in the case of duck hepatitis B virus (DHBV), host
specificity seems controlled partly at the receptor level. The middle
portion in the pre-S region of the viral large envelope protein binds
specifically to duck carboxypeptidase D (DCPD) but not to its human or
chicken homologue. Although domain C of DCPD is implicated in ligand
binding, the exact pre-S contact site remains to be determined. We
prepared and tested a panel of chimeric constructs consisting of
DCPD and human carboxypeptidase D (HCPD). Our results indicate that a
short region at the N terminus of domain C (residues 920 to 949) is
critical to DHBV binding and is a major determinant for the host
specificity of DHBV infection. Replacing this region of the DCPD
molecule with its human homologue abolished the DHBV interaction,
whereas introducing this DCPD sequence into HCPD conferred efficient
DHBV binding. Extensive analysis of site-directed mutants revealed that
both conserved and nonconserved residues were important for the pre-S
interaction. There were primary sequence variations and secondary
structural differences that contributed to the inability of HCPD to
bind the DHBV pre-S domain.
 |
INTRODUCTION |
A clear definition of attachment and
entry within the hepadnavirus infectious life cycle is of major
interest. Hepatitis B virus (HBV) is the prototype member of this
family of enveloped DNA viruses with hepatotropism and a narrow host
range; however, there is no cell culture model system to allow for
receptor identification. Duck hepatitis B virus (DHBV), a related avian
hepadnavirus, is a suitable model in which to characterize the early
events of hepadnavirus infection due to the availability of hepatocytes for infection studies. Duck carboxypeptidase D (DCPD) has been independently identified as a viral binding partner in experiments using DHBV particles and pre-S tagged glutathione
S-transferase (GST) fusion proteins (17, 24).
Recent studies provide compelling evidence that DCPD is an avian HBV
receptor. For example, DCPD-reconstituted kidney and liver cell lines
support DHBV attachment and entry (23), and polyclonal
antibodies against DCPD block DHBV infection of primary duck
hepatocytes (25). Furthermore, DHBV large envelope protein
expression downregulates DCPD levels in infected ducks (2).
The mouse, rat, and human homologues of DCPD have been cloned
(16, 22, 26). Carboxypeptidase D (CPD) is a type I
transmembrane glycoprotein containing three 50-kDa repeats (domains A,
B, and C), and each is similar to the carboxypeptidase N/E subfamily of
metallocarboxypeptidases (22, 26). The bulk of the protein is extracellular, comprised of domains A and B and most of domain C,
followed by a hydrophobic transmembrane anchor and a short (58-residue)
cytosolic C-terminal tail (18). Enzymatic activity has
been ascribed to domain A and B (5); the physiological role of domain C is unknown. The crystal structure of domain B has been
established and used to model the structures of domains A and C, and it
has a highly conserved overall topology (1, 12).
An initial mapping study has defined the DCPD binding region within a
66-amino-acid (aa) segment spanning pre-S residues 43 to 108 (15). The contact site was further narrowed to residues 87 to 102 using a large panel of N-terminal, C-terminal, and
double-deletion constructs (24). A short pre-S peptide,
composed of residues 80 to 104, could bind DCPD, though at reduced
efficiency compared with the full-length molecule (24).
Breiner et al., using internal deletion mutants, established that
residues 85 to 115 formed the major binding domain, while a sequence
N-terminal to this domain contributed to full binding affinity
(3). Combining the results of surface plasmon resonance
spectroscopy with two-dimensional nuclear magnetic resonance analysis,
Urban et al. have proposed a two-step receptor-ligand interaction
(25). In this model, low-affinity primary complexes form
between DCPD and the essential binding sequence comprising residues 85 to 115; these complexes are stabilized via a 60-aa sequence toward the
N terminus of the pre-S domain.
Despite extensive ligand scrutiny, the receptor sequences responsible
for pre-S interaction remain indistinct. Characterization of the
structural basis of DCPD-pre-S interaction may permit the design of
antiviral agents to block hepadnavirus infection at the receptor level
and may further clarify the species specificity of DHBV infection.
Chicken and human CPD molecules do not possess affinity for DHBV pre-S
protein (18). Thus, receptor-ligand interaction must be a
major determinant of the host specificity of DHBV infection. Our study
was designed to identify host-specific sequences that are critical for
DHBV binding, and we focused on DCPD domain C, since this region had
previously been shown to be responsible for interaction with the DHBV
pre-S protein (5).
A 30-aa sequence at the N terminus of DCPD domain C (positions 920 to
949) was found to be a major determinant for a host-specific receptor-ligand interaction, since inserting this 30-aa sequence into
human CPD (HCPD) restored DHBV binding capacity. Conversely, replacing
a 49-aa region containing this sequence with the human homologue
abolished the DCPD-DHBV interaction. Site-directed mutagenesis of this
region revealed that replacement of as few as 4 aa with the human
sequence, or a 3-aa substitution of conserved residues, abolished DCPD
binding to DHBV. Some of the mutants that failed to mediate DHBV
binding also displayed low steady-state levels of DCPD protein,
suggesting that reduced protein stability was partly responsible. With
respect to HCPD, we found that a P-to-LAL conversion promoted a local
secondary structural change and reduction of DHBV binding capacity.
Other substitutions found in HCPD can also abolish viral binding when
introduced into a DCPD background, although these changes do not affect
protein secondary structure.
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MATERIALS AND METHODS |
CPD DNA clones.
The DCPD deletion mutant (delA/B)
was similar to the pG180DS33 construct described by Eng et al.
(5). To generate this construct, DCPD cDNA cloned into the
pcDNA3.1zeo(
) vector (23) was digested with
ClaI and KpnI. The 6.5-kb fragment was gel
purified and ligated with a 0.2-kb fragment generated by
ClaI/KpnI digestion and gel purification of the
PCR product between sense primer
5'-ATCAGGTACCGCAAAGGTGGGGTACAGG-3' (KpnI site underlined) and antisense primer
5'-ACGTAACACTGAAATCCTTC-3'. This construct expresses the
N-terminal 48 residues of domain A (containing the signal peptide to
allow proper targeting), 37 C-terminal residues of domain B (residues
868 to 904), and the entire 483 residues of domain C (residues 905 to
1387) (Fig. 1A, top). For easy exchange
of domain C fragments between DCPD and HCPD, two unique restriction
sites were introduced into DCPD domain C by an overlap extension PCR
(14). The HindIII site was generated by a
G-to-T substitution at nucleotide position 3075, while the BamHI site was created through C3486A and T3489C changes.
None of the substitutions altered the encoded amino acid sequence. The
HCPD cDNA sequence has been reported previously (22); a full-length clone was inserted into the
EcoRI-HindIII sites of the pcDNA3.1zeo(
)
vector in two steps. To construct its deletion (delA/B)
mutant, HCPD-pcDNA3.1/zeo(
) was double digested with SacII
and ClaI. The 7-kb fragment was gel purified and ligated to
a 0.2-kb SacII/ClaI fragment of the PCR product
of primers 5'-ATCACCGCGGGCGAAGGCGCTATTCAGGTCAACTTCAC-3'
(sense; SacII site underlined) and
5'-GTGGATAGTTCATTACAAGTCCTCTC-3' (antisense). The resultant
protein would lack residues 74 to 857 comprising most of domains A and
B (see Fig. 4, construct C). In the course of the sequencing of the del
A/B construct of HCPD, we noticed errors in our previous publication
(22) as a result of high GC content. In fact, the sequence
from the initiation codon to the SacII site is identical to
that reported subsequently by Ishikawa et al. (16).
Chimeric constructs between HCPD and DCPD domain C were generated
either by restriction enzyme digestion or via PCR. Single or multiple
point mutations were created by overlap extension PCR and mutants were
inserted into the desired backbone using the appropriate restriction
enzymes. All mutant constructs were verified by sequence analysis. The
primers and detailed procedures used to make these constructs can be
obtained from the authors upon request.

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FIG. 1.
Mapping of a host determinant for DHBV binding using
full-length CPD constructs. (A) Diagrams of CPD constructs and summary
of DHBV binding capacity. Solid lines represent DCPD sequence; dotted
lines represent HCPD sequence. Junctions between domains A, B, and C
are indicated by vertical bars, and residues at the junctions are shown
for the full-length DCPD and HCPD molecules. The number below each
restriction site indicates the position of the first amino acid residue
encoded by the restriction site. The HindIII and
BamHI sites within domain C are absent in the original
DCPD cDNA and chimeric constructs A, B, and C. Constructs D, E, and F
were obtained by exchanging the 1.3-kb
ClaI-EcoRI fragment of full-length DCPD
with the corresponding fragment of constructs H, I, and J in Fig. 3,
respectively. For the chimeric constructs, residues occupying the
junctions are based on the numbering of DCPD rather than HCPD. The
boxed area is a region important for DCPD binding of DHBV, where
replacement either upstream or downstream of the ClaI
site with the human homologue destroys DHBV binding. (B) (Left panel)
Lack of affinity between DHBV and HCPD. Bosc cells were transiently
transfected with vector DNA (Mock), DCPD cDNA, or HCPD cDNA. After the
binding experiment, cell-associated DHBV DNA was revealed by Southern
blot analysis. Positions of relaxed circular (RC) and linear DHBV DNA
are indicated on the left. (Right panel) Binding of DHBV particles to
Bosc cells transfected with DCPD-HCPD chimeric constructs. Bound DHBV
was revealed by Western blot analysis of viral large envelope protein.
Positions of full-length 36-kDa large envelope protein and the 28-kDa
processed form are indicated.
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Expression of CPD constructs.
We monitored expression of
various constructs using an in vitro translation assay. In brief,
plasmid DNA (0.5 µg) was transcribed with T7 polymerase and
translated in rabbit reticulocyte lysate using TNT Quick coupled
Transcription/Translation systems (Promega). Incorporation of
[35S]methionine allowed detection of the
translation product by sodium dodecyl sulfate-polyacrylamide gel
electrophoresis (SDS-PAGE) and fluorography. To monitor CPD protein
expression in cells, Bosc cells grown in 6-well plates were first
transfected with 6 µg of DNA by the calcium-phosphate precipitation
method and then lysed 2 days later in 100 µl of lysis buffer
containing 10 mM HEPES (pH 7.5), 100 mM NaCl, 1 mM EDTA, and 1% NP-40.
Duplicate samples (10 µl each) were separated by SDS-10% PAGE and
transferred to polyvinylidene difluoride (PVDF) membranes. After being
blocked at room temperature with 3% bovine serum albumin in
phosphate-buffered saline (PBS) containing Tween 20 (0.05%; PBST) for
2 h, the blots were incubated at 4°C overnight with a 1:1,000
dilution of rabbit polyclonal antibodies against liver-derived DCPD
(23) or the C-terminal 179 aa of HCPD expressed in
Escherichia coli (19). After
extensive washing, the blots were incubated at room temperature with a
1: 800 dilution of 125I-labeled protein A (low
specific activity; New England Nuclear) for 4 h, followed by a
wash. Bound protein A was revealed by autoradiography.
Binding of DHBV to CPD-transfected Bosc cells.
The binding
assay was performed as described previously (23), and each
construct set was tested several times to ensure reproducibility. Bosc
cells grown in 60-mm-diameter dishes were transfected with 8 µg of
various constructs. Two days later, cells were incubated with 40 µl
of prespun viremic duck serum diluted 1:30 in culture medium for
12 h or longer (for full-length constructs, viremic duck serum was
diluted 1:10). After a thorough washing step, cells were transferred to
15-ml Falcon tubes in 10 ml of medium. Cells were pelleted down and
stored at
80°C before lysis or were lysed immediately with 100 µl
of lysis buffer as described above.
Southern blot analysis of DHBV DNA.
Cell lysates were
diluted with TEN buffer (10 mM Tris, 1 mM EDTA, 150 mM NaCl),
and treated with proteinase K (0.5 mg/ml) in the presence of SDS
(0.5%) at 37°C for several hours. The DNA was extracted with
phenol-chloroform, precipitated with ethanol, and dissolved in
Tris-EDTA (pH 8.0). Following electrophoresis in a 1% agarose gel, and
staining with ethidium bromide, DNA was transferred to nylon membranes
and hybridized with a randomly primed probe of highly purified
PCR-derived DHBV DNA. After thorough washing, hybridization signals
were detected by exposing the membranes to Kodak films.
Western blot analysis of large envelope protein.
Cell
lysates were electrophoresed by SDS-12% PAGE and transferred to PVDF
membranes. Blots were blocked at room temperature with 3% bovine serum
albumin in PBST for 2 h and then incubated overnight with a
1:4,000 dilution of rabbit pre-S antibody (23) at 4°C in
PBST. After thorough washing, blots were incubated in a 1:20,000
dilution of donkey anti-rabbit antibodies conjugated to horseradish
peroxidase (Amersham) for 1 h, followed by a wash. The enhanced
chemiluminescence (EC; Pierce) detection system was employed according
to the manufacturer's instructions.
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RESULTS |
Involvement of DCPD residues 868 to 1024 in host-specific
interaction with DHBV.
While DCPD has binding affinity for DHBV
via domain C (5), HCPD does not interact with the virus
(Fig. 1B, left panel). We exchanged various parts of domain C between
the two proteins to ascertain why HCPD failed to associate with DHBV.
Within domain C there is 82.5% sequence identity between these two
proteins (22) (Fig. 2A). A
schematic representation of the duck delA/B construct used
is shown in Fig. 1A and 3A (top). A large portion of coding sequence
for domain A and domain B (nucleotide positions 146 to 2599, corresponding to protein residues 49 to 867) was deleted. The presence
of two KpnI sites and of unique ClaI,
HindIII, BamHI, and EcoRI sites
facilitated the construction of 10 chimeric molecules with HCPD (Fig.
3A, lanes A to J). In vitro translation experiments confirmed production of proteins of the expected size for
all constructs (Fig. 3B). These constructs were transiently transfected
into Bosc cells (a derivative of human embryonic kidney cell line 293),
which are known for high transfection efficiency (23).
Transfected cells were incubated at 37°C with viremic duck serum and
washed extensively before lysis. Bound DHBV particles were determined
by Southern and Western blot analyses.

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FIG. 2.
(A) Comparison of amino acid sequences of DCPD (top) and
HCPD (bottom) in the C-terminal end of domain B and the entire domain
C. The start of domain C is indicated. Double dots between the two
sequences indicate conserved residues, while single dots denote
conservative changes. Dashes within a sequence represent deleted
residues. Restriction sites at the cDNA level are shown, and residues
encoded are boldfaced. The underlined DCPD sequence (top row) indicates
the C-terminal 35 aa of domain B that is dispensable for DHBV binding
(see Fig. 4, construct A). The 30 aa residues (32 aa in HCPD) that
determine a species barrier against DHBV infection of humans are boxed.
(B) Comparison of the 30-aa host determinant in DCPD domain C with its
counterparts in domain A and domain B.
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FIG. 3.
Mapping of the host determinant of DHBV binding by
restriction fragment exchange of DCPD delA/B construct.
(A) Schematic illustration of the constructs and summary of DHBV
binding results. For DCPD delA/B, positions of the
restriction sites at both the nucleotide (cDNA) and amino acid
(protein) levels are indicated. For the chimeric constructs A to J,
amino acid positions at the junction between DCPD and HCPD are
indicated (numbering based on DCPD). Solid lines indicate duck
sequence, while dashed lines denote the human homologue. Slashes
between numbers indicate junctions as a result of deletion. Boxed area
(KpnI to HindIII) is the host determinant
for DHBV binding. (B) In vitro translation of the chimeric constructs.
The expected size of the translation product is about 55 kDa. Mock,
vector DNA. (C and D) Binding of DHBV to CPD-transfected Bosc cells as
determined by Southern blot analysis of viral DNA (C) and Western blot
analysis of viral large envelope protein (D). For panel C, lanes M1 and
M2 denote virion-derived DHBV DNA and linearized 3-kb DHBV DNA,
respectively. Mock, vector DNA-transfected cells. Positions of relaxed
circular (RC) virion DNA and linear DNA are indicated. In panel D, lane
M contains 0.5 µl of viremic duck serum. Positions of full-length
36-kDa large envelope protein and the 28-kDa truncated form are
indicated.
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The results of these two assays were highly concordant (Fig.
3C and D).
Replacement of large portions of DCPD domain C with
its human homologue
often led to loss of viral binding capacity
(Fig.
3, constructs A, B,
and C). However, substitution of a large
fragment between
HindIII and
EcoRI sites did not affect
binding
capacity (Fig.
3, construct E). In contrast, exchange of as few
as 65 residues between the first
KpnI site and
ClaI site (positions
868 to 932) abolished viral binding
(Fig.
3, construct G). Similarly,
substitution of the neighboring
ClaI-
HindIII fragment (encoding
93 residues at positions 932 to 1024) also nearly eliminated DHBV
binding
(Fig.
3, construct H). These results implicated a 158-aa
sequence
bracketed by the first
KpnI site and the
HindIII site
(residues 868 to 1024) (Fig.
3A, boxed
areas) as a host determinant
of the viral receptor-ligand interaction.
Constructs in which
part or all of this sequence was replaced with HCPD
(constructs
A, B, C, D, F, G, and H) were inactive in mediating DHBV
binding
(Fig.
3A).
The above experiments were performed using the artificial mutants
lacking most of the A and B domains and thus may have limitations.
Therefore, a panel of six chimeras of full-length protein was
tested to
confirm our observations (Fig.
1). Again, substitution
around the
ClaI site (Fig.
1A, boxed areas) invariably abolished
viral
binding (Fig.
1, constructs A, B, C, and D), while replacement
of the
HindIII-
BamHI fragment and
BamHI-
EcoRI fragment in domain
C was tolerated
(Fig.
1, constructs E and
F).
Transfer of a 30- to 51-aa sequence between DCPD and HCPD alters
DHBV binding capacity.
Domain C of DCPD starts at residue 907 of
the cDNA characterized by Kuroki and colleagues (18),
corresponding to residue 905 in our cDNA clone. The delA/B
construct still contained 37 C-terminal residues of domain B. To verify
whether the remaining domain B sequence is dispensable for pre-S
binding, we removed 35 residues (868 to 902) from the delA/B
construct (Fig. 2A, top row). The resulting construct, with the new
junction at position 903 (Fig. 4A,
construct A), retained full viral binding capability (Fig. 4B, left
panel). Comparing the duck sequence 903 to 1024 (HindIII
site of the DCPD cDNA) with its human homologue revealed clustering of
variant residues within residues 920 to 949 (Fig. 2A, boxed region).
Interestingly, the ClaI site, either side of which is
important for pre-S interaction (Fig. 1 and 3), sits in the middle of
the coding sequence for this domain (Fig. 2A). We therefore introduced
duck residues 920 to 949 into the human equivalent of construct A (Fig.
4A, construct B) to test the importance of this region in determining
host-specific pre-S binding affinity. Whereas no viral binding occurred
in cells transfected with the human delA/B construct (Fig.
4, construct C), construct B acquired binding capacity similar to that
of the delA/B construct of DCPD (Fig. 4B). Conversely,
replacement of a 49-aa DCPD sequence containing the entire 30-aa
stretch and 19 additional C-terminal residues (920 to 968) with the
corresponding 51-aa sequence from HCPD abolished DHBV binding
capacity (Fig. 4, construct D). These results demonstrate that sequence
variations within this 30-aa domain account for the failure of HCPD to
interact with DHBV.

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FIG. 4.
Localization of the host determinant to a 30-aa sequence
in the N terminus of DCPD domain C. (A) Diagram of chimeric domain C
constructs. Solid lines, DCPD; dotted lines, HCPD. Slashes, junctions
as a result of deletion. Duck sequences are numbered above the line,
while human sequences are numbered below the line. Construct A differs
from delA/B of DCPD by removal of an additional 35-aa
sequence in domain B (868 to 902). Construct C is the
delA/B construct of HCPD. Constructs D, E, and F were
based on the delA/B construct of DCPD and had residues
920 to 968, 920 to 932, and 932 to 968 replaced with corresponding
human sequences, respectively. Construct B is a deletion mutant of HCPD
without domain B for which residues 914 to 945 were replaced with the
duck homologue (residues 920 to 949). (B) Binding of DHBV as
established by Western blot analysis of viral large envelope protein.
Positions of full-length 36-kDa large envelope protein and the 28-kDa
truncated form are indicated. Mock, vector DNA-transfected Bosc
cells.
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Experiments with the deletion construct A and exchange construct B
(Fig.
4) appeared to exclude the importance of upstream
(868 to 919)
and downstream (950 to 1024) sequences in determining
the specificity
of the receptor-ligand interaction. However, experiments
with two
additional constructs suggest that these sequences derived
from DCPD
could maintain low binding capacity when part of the
critical sequence
920 to 949 (either side of the
ClaI site) was
replaced with
its human counterpart. For example, construct E
had residues 920 to 932 replaced with human sequence and maintained
a low viral binding
capacity, whereas construct G in Fig.
3 (simplified
as construct 3G;
with residues 868 to 932 replaced) did not, thus
illustrating the
contribution of the C-terminal part of domain
B to pre-S binding (Fig.
4). Sequence alignment of DCPD and HCPD
revealed numerous substitutions
between residues 868 and 902 (Fig.
2A). Similarly, construct 4F
maintained low binding capacity when
residues 932 to 968 were replaced
with HCPD, while construct 3H
manifested negligible binding with
residues 932 to 1024
substituted.
Limited amino acid substitutions within residues 920 to 949 of DCPD
abolish DHBV binding.
Comparison of residues 920 to 949 of DCPD
with its human homologue reveals seven conservative and five
nonconservative amino acid changes, and insertion of an AL dipeptide
(Fig. 5A). Of these, eight amino acid
substitutions and the dipeptide insertion were upstream, and the
remainder were downstream, of the ClaI site. Thus, the
corresponding human sequence (924 to 955) is 32 aa in length. We
introduced single or multiple variant human residues into the
delA/B construct of DCPD to dissect the relative
contribution of these individual sequence changes with respect to pre-S
binding. None of the single substitutions at position 920, 924, 931, or 948 significantly reduced DHBV binding (Fig. 5, constructs B, C, and H;
also data not shown). Similarly, double amino acid substitution failed
to modify pre-S binding capacity (Fig. 5, constructs G, I, J, K, L, and
N) with the exception of construct M (P931L P936S), for which we
observed decreased binding activity. It is noteworthy that these two
changes, when combined with two additional changes, substantially
reduced or abolished binding capacity (Fig. 5, constructs O and P).
Similarly, two nonconservative changes coupled with two conservative
changes greatly reduced DHBV binding (Fig. 5, construct F). These
results argue against one particular residue as being the sole
determinant for pre-S binding; rather, they suggest the importance of
many residues (conservative and nonconservative) in viral
receptor-pre-S protein interaction. Conversion of 931P of DCPD into
the LAL sequence also reduced DHBV binding activity (Fig. 5, construct
D). Both the P-to-L substitution and AL insertion are required, since
AL insertion or P931L substitution alone failed to modify DHBV binding
capacity (Fig. 5, constructs E and N).

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FIG. 5.
Effects of DCPD-to-HCPD changes within residues 920 to
949 on DHBV binding capacity. (A) Site-directed mutant constructs. The
complete duck sequence between positions 920 and 949 is shown on the
top (roman type, conserved residues; boldface, nonconserved residues;
hyphen, deletion), and variant human sequences are given below. The
position of the ClaI site at the cDNA level is
indicated. The parental construct was HCPD delA/B, in
which the SacII-KpnI fragment had been
replaced with a duck sequence encoding residues 868 to 1304. Mutations
were introduced into this construct by overlap extension PCR and
cloning. Construct A combined all the mutations upstream of the
ClaI site, while construct F had all the mutations
downstream. Other constructs had single, double, or multiple mutations
on both sides of the ClaI site, or contained a dipeptide
insertion. (B) Binding of DHBV as determined by Western blot analysis.
Mock, vector DNA-transfected cells. Duck, cells transfected with the
delA/B construct of DCPD. Human, cells reconstituted
with the delA/B construct of HCPD.
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Sequence change in the HCPD 914-to-945 aa sequence is required to
confer DHBV binding.
In the reverse experiment, we determined how
many human-to-duck sequence changes were required for acquisition of
DHBV binding in the delA/B construct of HCPD. Many
nonconservative and conservative changes were introduced into residues
911 to 947 of the HCPD delA/B construct. As expected,
multiple substitutions introduced into either side of the
ClaI site failed to generate viral binding capacity (data
not shown). Minimal DHBV binding affinity was established by LAL-to-P
conversion followed by two additional substitutions (Fig.
6, construct F). The LAL-to-P change was
necessary because, when it was absent, substitution of four or five
residues with the duck sequence failed to confer binding capability
(Fig. 6, constructs G and H). This finding is consistent with results
demonstrated by construct 5D, where the reverse change (from P to LAL)
in DCPD was sufficient to reduce DHBV binding. However, the LAL-to-P
change by itself was insufficient to induce binding activity (Fig. 5, construct I).

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FIG. 6.
Substitution of residues within the host determinant of
HCPD with duck sequence confers DHBV binding. (A) Site-directed mutant
constructs. The human sequence from position 914 to 945 is given in
full (roman type, conserved residues; boldface, nonconserved residues).
For DCPD only the variant residues are shown. Hyphens indicate deleted
residues. The ClaI site at the cDNA level is indicated.
Mutations as listed were introduced into the delA/B
construct of HCPD. (B) Binding of DHBV to transiently transfected Bosc
cells as analyzed by Western blotting. Positions of the full-length
36-kDa large envelope protein and the 28-kDa truncated form are
indicated. Mock, vector DNA-transfected cells; Duck, cells transfected
with the delA/B construct of DCPD.
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Coupling the LAL-to-P conversion with six or more amino acid changes
generated efficient DHBV binding in the HCPD molecule
(Fig.
6,
constructs A to E). The exact residues substituted did
not appear
critical, since constructs C and E have different replacement
combinations. Thus, more-extensive sequence changes were needed
to
confer efficient binding of DHBV to HCPD (Fig.
6) than to inactivate
DHBV binding in the DCPD background (Fig.
5). This is consistent
with
the concept that the native HCPD contains multiple amino
acid changes,
a fraction of which are sufficient to prevent interaction
with
DHBV.
Role of conserved residues within 920 to 949 of DCPD in pre-S
binding.
In addition to variant residues, we also evaluated the
importance of conserved residues within the 920-to-949 sequence of DCPD
in mediating pre-S binding. To do this, two mutant constructs, Y932Q
R933D Y934Q (Fig. 7A, construct A) and
Y937Q K938N D939G (construct B) were prepared. While the YKD-to-QNG
change had no effect, replacement of YRY sequence by QDQ abolished
viral binding activity (Fig. 7B).

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FIG. 7.
Contribution of conserved residues within the host
determinant of DCPD to DHBV binding. (A) Wild-type (WT) sequence
between positions 920 and 949 of DCPD domain C and mutated residues in
constructs A and B. Mutations as indicated were introduced into the
delA/B construct of HCPD in which the
SacII-KpnI site was replaced by DCPD
sequence encoding residues 868 to 1304. (B) Binding of DHBV particles
as revealed by Western blot analysis. Mock, vector DNA-transfected Bosc
cells; delA/B, cells transfected with
delA/B of DCPD.
|
|
CPD protein levels in transfected cells.
While the negative
binding of chimeric constructs and site-directed mutants tested here is
consistent with residues 920 to 949 being a direct contact site, it
could be explained alternatively by poor expression of protein, its
rapid degradation, or failure to reach the cell surface. To evaluate
the steady-state levels of CPD protein, we performed Western blot
analysis using polyclonal DCPD antibodies (23). Since the
DCPD antiserum did not recognize the HCPD sequence efficiently, a
rabbit serum against the C-terminal 179 aa of HCPD (19)
was employed as well. As shown in Fig. 8, full-length DCPD-HCPD chimeric constructs were all well expressed (stronger signals were obtained with DCPD antibodies, which were raised
against the full-length DCPD protein). With regard to the deletion
constructs, most ex-pressed at high levels as revealed by the DCPD and
HCPD antibodies (DCPD antibodies recognized primarily DCPD-based
constructs, while HCPD antibodies could detect both types of
constructs). In addition to a band of the predicted size (around 55 kDa), several slower-migrating species up to 62 kDa could be detected
as well (Fig. 8). These bands, which differ in their intensity among
different constructs, may represent phosphorylated or glycosylated
forms of the CPD protein. Several constructs were found to express
lower levels of CPD protein, including constructs 3A, 3C, 3G, 3J, 4B,
5O, and 5P. Of these, construct 3J and 4B were known to mediate
efficient DHBV binding. Thus, failure of several constructs to mediate
DHBV binding may be attributable to protein instability, but a high
level of protein expression or stability is not always required for
efficient DHBV binding.

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FIG. 8.
Detection of CPD proteins in transiently transfected
Bosc cells. Samples were analyzed by both DCPD antibodies (against the
entire protein) and HCPD antibodies (against the C-terminal 179 residues). The 36 constructs tested here have been described in the
figures above (Fig. 1 and 3 to 7) and labeled alphabetically. Samples
labeled "NN" are negative controls (nontransfected Bosc cell
lysate). Construct labeled "3 W" is the wild-type DCPD
delA/B construct. Molecular size markers (in
kilodaltons) are shown to the right. CPD proteins expressed by the
human and duck delA/B constructs presented as multiple
bands, possibly as a result of posttranslational modifications. Note
that the two antibodies recognized these samples differently. The DCPD
antibody was more sensitive in detecting full-length constructs (1A to
1F) than delA/B constructs. Of the deletion mutants, it
recognized DCPD-based constructs (such as 5D, 5E, 5K, 5N, 5 M, and 7B)
more efficiently than HCPD-based constructs (4C, 6A, 6E, 6H, 6I, 6K,
and 6C). These constructs have been tested in additional transfection
and Western blot analysis, and similar results were obtained.
|
|
 |
DISCUSSION |
The N terminus of CPD domain C as a host-specific
determinant for DHBV interaction.
The mechanisms responsible for
hepadnaviral host specificity are not fully understood, although
circumstantial evidence indicates that they may lie at the receptor
level. For example, HBV transgenic mice support HBV replication
(4). Furthermore, DHBV DNA will replicate, although at
reduced efficiency, in human HCC cell lines (20). Previous
investigations suggest that DCPD lacked affinity for the HBV pre-S
protein (17, 24), and the DHBV pre-S domain does not react
with CPD molecules of chicken or human origin (18). Thus,
the specificity of the receptor-ligand interaction is a major factor
that determines DHBV noninfectivity in chickens and humans and prevents
HBV infectivity in ducks. There is, however, an exception in heron HBV,
where the viral pre-S domain binds DCPD but the virus does not infect
duck hepatocytes, indicating the involvement of other components
(15). The present study attempted to determine a
host-specific element(s) of DCPD binding to DHBV and to initiate an
effort at understanding the structural basis of DCPD interaction with
the pre-S domain of DHBV large envelope protein. We mapped the host
(duck versus human) determinant of pre-S binding to the contiguous
KpnI-ClaI and
ClaI-HindIII restriction enzyme fragments
using chimeric delA/B constructs based on available and
artificially created restriction sites (Fig. 3). Experiments with
full-length constructs corroborated the importance of the sequence
around the ClaI site, thus explaining the initial
observation that replacement of DCPD sequence with that of HCPD, either
upstream or downstream of the ClaI site, invariably
abolished DHBV binding (Fig. 1, constructs A and B). Further analysis
revealed a 30-aa sequence (32 aa in HCPD) surrounding the
ClaI site as the key determinant of host-specific
virus-receptor interaction, as reciprocal fragment exchange reversed
the binding properties (Fig. 4). Sequence immediately upstream of this
element (the C terminus of domain B) is not required, as indicated by the deletion construct A (Fig. 4). Within the host determinant there
are 12 amino acid changes and a dipeptide insertion in HCPD relative to
DCPD (Fig. 5). Mutational analysis revealed that P-to-LAL conversion at
position 931 reduced DHBV binding (Fig. 5, construct D). Alternatively,
four amino acid substitutions, two upstream and two downstream of the
ClaI site, were equally effective in eliminating or
substantially reducing DHBV binding (Fig. 5, constructs O and P). Thus,
a fraction of the sequence changes that have accumulated in this HCPD
region are sufficient to render the protein inactive with respect to
DHBV binding. However, Western blot analysis revealed reduced levels of
DCPD protein in cells transfected with construct 3A, 3C, 3G, 5O, or 5P
(Fig. 8), suggesting poor expression or instability associated with
these chimeras and mutants. Besides, we do not know whether some of the
mutants tested here, despite normal protein expression and stability,
could reach the cell surface to mediate virus binding.
DCPD and mammalian CPD homologues have different local secondary
structures within the host determinant of DHBV interaction.
As
determined by eight prediction programs for protein secondary
structure, domain C of HCPD exhibits a secondary structure different
from that of DCPD within this 30- or 32-aa stretch (Fig. 9). An additional helix is formed, or the
preexisting helix is extended, in a region corresponding to random coil
in DCPD. Inspection of the primary sequence (Fig. 9) reveals that the
most conspicuous difference is the 929VSP931 tripeptide sequence of
DCPD compared to the 913LALAL917 pentapeptide sequence in HCPD (one
copy of AL is derived from substitutions, another copy from insertion). The following observations suggest that the LAL sequence (not the LALAL
sequence) is required and sufficient for this structural change. (i)
Replacement of 931P in DCPD with the LAL sequence results in helix
formation and a reduction in DHBV binding (Fig. 10, row 4). (ii) Mouse and rat CPD
molecules, which have the LAL but not LALAL sequence (for lack of AL
insertion), adopt the helix structure (Fig. 10, row 6). (iii) Insertion
of the AL dipeptide sequence alone into DCPD (resulting in a PAL
tripeptide sequence) did not alter the secondary structure or affect
DHBV binding (Fig. 10, row 2). Thus, the presence of local randomly
coiled protein structure, rather than an
-helix, may be a
prerequisite for effective DHBV binding. Other sequence changes that
have accumulated in HCPD do not change the predicted secondary
structure but still abolish DHBV binding (Fig. 10, rows 8 to 10). Thus,
HCPD may contain both secondary structure-dependent and secondary
structure-independent mechanisms to abolish the DHBV interaction.

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FIG. 9.
Predicted secondary structures of the host determinant
of DHBV interaction in DCPD and HCPD. The top two rows show the primary
sequences (roman type, conserved; bolface, nonconserved). Rows 1 to 8 show the predicted secondary structure of DCPD (upper line) and HCPD
(lower line) according to the methods of Predator (6),
SOPM (9), SOPMA (10), GORI (8),
GORIII (11), GORIV (7), PHD
(21), and the multivariate regression combination
(13), respectively. H, helix; E, extended; C, random coil;
T, turn. A consensus was assumed when eight of the eight methods gave
the same structure prediction for a given amino acid.
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|

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FIG. 10.
Predicted secondary structures of the host determinant
of CPD molecules and mutants. The secondary structure prediction was
based on the Predator program (6). Duck residues (920 to
949) are in roman type, while residues different from wild-type DCPD
are boldfaced. Hyphen: deleted sequence. For secondary structure H, E,
and C indicate helix, extended, and random coil, respectively. Rows: 1, DCPD; 6, rat and mouse CPD; 7, HCPD; 3, P931L; 2, 4, 5, 8, 9, and 10, constructs E, D, A, F, O, and P in Fig. 5, respectively; 11, construct
A in Fig. 7. N.D., not determined.
|
|
Does the 920 to 949 sequence element in DCPD constitute a direct
contact site for the pre-S domain?
Mutational analysis of residues
920 to 949 suggests that many conserved and variant residues are
required for DHBV binding (Fig. 5 to 7). Since most of the mutations
that abolish DHBV binding do not alter local secondary structure, these
findings implicate this region as a direct contact site for the DHBV
pre-S domain. Consistent with this notion, the corresponding sequences
in domain A and domain B, which have no binding affinity for DHBV,
diverge extensively from that of domain C (Fig. 2B). However, some of the mutants that fail to bind DHBV display low steady-state levels of
DCPD protein (constructs 5O and 5P [see Fig. 8]). In addition, we
cannot exclude the possibility that for some other constructs that fail
to mediate DHBV binding, the mutant proteins fail to reach the cell
surface. Thus, other approaches, such as DCPD deletion mutants, and
direct in vitro binding assays, will help establish whether the
sequence element defined by the DCPD-HCPD chimeras is necessary and
sufficient for pre-S binding. Elucidation of the virus contact site on
DCPD will present an opportunity to block viral entry into hepatocytes
at the receptor level with specific antibodies or competing peptides.
 |
ACKNOWLEDGMENTS |
We thank our colleagues in the Liver Research Center for
stimulating discussions, especially Xiaoming Gong for discussions on
protein secondary-structure prediction.
This work was supported by NIH grants CA-35711 and AA-08169 and in part
by Center of Biomedical Research Excellence grant p20RR. H. C. Spangenberg is supported by a fellowship of the Ernst Jung Stiftung
fuer Wissenschaft und Forschung, Germany. J. Li is a Liver
Scholar of the American Liver Foundation.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Liver Research
Center, Rhode Island Hospital and Brown University School of Medicine, 55 Claverick St., 4th Floor, Providence, RI 02903. Phone: (401) 444-7365. Fax: (401) 444-2939. E-mail:
Shuping_Tong_MD{at}Brown.edu.
Present address: Medizinische Universitätsklinik Freiburg,
Abteilung II, 79106 Freiburg, Germany.
 |
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Journal of Virology, November 2001, p. 10630-10642, Vol. 75, No. 22
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.22.10630-10642.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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