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Journal of Virology, July 2001, p. 5913-5920, Vol. 75, No. 13
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.13.5913-5920.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Adenovirus Vectors with the 100K Gene Deleted and
Their Potential for Multiple Gene Therapy Applications
B. L.
Hodges,1
H. K.
Evans,2
R. S.
Everett,1
E. Y.
Ding,1
D.
Serra,1 and
A.
Amalfitano1,2,*
Department of Pediatrics, Division of Medical
Genetics,1 and Department of
Genetics,2 Duke University Medical Center,
Durham, North Carolina 27710
Received 3 November 2000/Accepted 6 April 2001
 |
ABSTRACT |
The 100K protein has a number of critical roles vital for
successful completion of the late phases of the adenovirus (Ad) life
cycle. We hypothesized that the introduction of deletions within the
100K gene would allow for the production of a series of new classes of
Ad vector, including one that is replication competent but blocked in
the ability to carry out many late-phase Ad functions. Such a vector
would have potential for several gene therapy applications, based upon
its ability to increase the copy number of the transgene encoded by the
vector (via genome replication) while decreasing the side effects
associated with Ad late gene expression. To efficiently produce
100K-deleted Ad ([100K
]Ad) vectors, an E1- and
100K-complementing cell line (K-16) was successfully isolated.
Transfection of an [E1
,100K
]Ad vector genome into the
K-16 cells readily yielded high titers of the vector. After infection
of noncomplementing cells, we demonstrated that [100K
]Ad vectors have a significantly decreased ability to express several Ad
late genes. Additionally, if the E1 gene was present in the infected
noncomplementing cells, [100K
]Ad vectors were capable of
replicating their genomes to high copy number, but were significantly blocked in their ability to efficiently encapsidate the replicated genomes. Injection of an [E1
,100K
]Ad vector in vivo
also correlated with significantly decreased hepatotoxicity, as well as
prolonged vector persistence. In summary, the unique properties of
[100K
]Ad vectors suggest that they may have utility in a
variety of gene therapy applications.
 |
INTRODUCTION |
Helper virus-independent, E1-deleted
adenovirus ([E1
]Ad)-based gene transfer vectors exhibit many
positive attributes, including a large transgene-encoding capacity,
a relative ease of high-titer production to clinical grades, and the
ability to infect a wide range of tissue types. Despite the fact
that [E1
]Ad vectors are significantly blocked in their
ability to replicate (relative to a wild-type Ad), low-level
replication and/or gene expression derived from
[E1
]Ad vectors can limit their usefulness (2, 18). To overcome this problem, we previously demonstrated
that [E1
]Ad vectors incorporating additional deletions in
the Ad E2b genes (polymerase and/or pTP) rendered
[E1
,E2b
]Ad vectors truly replication incompetent
(2, 10, 11). As a result, [E1
,E2b
]Ad vector-derived late gene expression was also significantly diminished, since Ad late gene expression is only initiated after Ad genome replication has occurred (19).
Despite the problems associated with Ad replication, a potentially
useful Ad vector might be one that can replicate its genome to very
high levels after infection of a cell. This feature could be
capitalized upon in efforts to either amplify transgene expression encoded by the vector and/or induce cytopathic effects as a consequence of high-level Ad replication and/or infectious virus production. For
example, E1a-positive, E1b-deleted ([E1a+,E1b
])Ad
vectors have been described; the E1b deletion restricts
E1a-dependent vector replication (and generation of infectious
vector) to cancer cells only, resulting in their death (3,
9). There is evidence, however, that
[E1a+,E1b
]Ad vectors can also replicate in noncancerous cells, potentially limiting the risk/benefit ratio of
[E1a+,E1b
]Ad-based cancer therapies
(17). In a recent attempt to address the latter concerns,
Ad vectors have been developed that are protease deleted (14). Protease-deleted [E1+]Ad viruses can also
replicate but are blocked in their ability to produce infectious virus,
due to inadequate maturation of viral capsid proteins during the late phase of the Ad life cycle. Importantly, however, both [E1b
] and
protease-deleted Ad vectors are fully capable of producing wild-type
levels of the Ad late genes once replication has occurred (14). The late genes are numerous and include the hexon,
100K, penton, and fiber proteins. Some of the toxicity normally
associated with the expression of these proteins (particularly penton)
may potentially limit the overall usefulness of both of these types of
replicating Ad vector.
It is with these considerations that we have targeted the 100K gene of
the Ad for deletion. After Ad replication occurs, transcription is
initiated from the major late promoter (MLP), and activation of the
MLP results in the generation of the L4 transcript, which encodes the Ad 100K protein. The 100K gene fully encompasses 10% of
the Ad genome, reflective of the vital role 100K plays in various aspects of the Ad life cycle. Functions of the 100K protein include the
transport of newly synthesized hexon monomers (the major structural protein of the Ad capsid) from the cytoplasm to the nucleus and trimerization of hexon monomers (4). Without this
activity, hexon monomers are degraded in the cytoplasm
(15). 100K also acts as a "scaffolding platform" for
the assembly of virus capsids, although the 100K protein has not been
found to be physically incorporated into mature Ad capsids
(13). 100K can also interact with a number of RNA
transcripts, both vector and host cell derived, preferentially allowing
for translation of Ad-derived late-gene transcripts (1, 12,
16). Considering these critical roles, we hypothesized that
deletions within the 100K gene might allow for the production of
Ad-based vectors with significantly altered characteristics. In this
report we now demonstrate that [100K
] vectors can be produced to
high titer and that the altered biology of vectors incorporating these
deletions might be capitalized upon in several gene therapy applications.
 |
MATERIALS AND METHODS |
Production of E1- and 100K-expressing cell lines.
Ad5-derived DNA was used as a template for the PCR amplification of the
100K open reading frame using an EcoRI-tailed forward primer, 5'-GCGGAATTCGATCATGGAGTCAGTCGAG-3', and an
XbaI-tailed reverse primer,
5'-GCCTCTAGAGTCCCATCTACGGTTGGG-3'. One hundred nanograms of
each primer was included in a reaction mixture containing 10 mM KCl, 10 mM
(NH4)2SO4,
20 mM Tris·HCl (pH 8.75), 2 mM
MgSO4, 0.1% Triton X-100, 0.1 mg of bovine serum
albumin/ml, 25 mM (each) deoxynucleoside triphosphates, 2.5 U of a
high-fidelity Taq polymerase (Stratagene, La Jolla, Calif.),
and 100 ng of Ad5 genomic DNA. After denaturation for 3 min at 95°C,
the reaction mixture was subjected to a limited number of PCR
amplification cycles consisting of DNA denaturation at 95°C for
30 s, primer annealing at 55°C for 45 s, and
Taq-mediated extension at 72°C for 1.5 min. This same PCR
was utilized to screen genomic DNA from G-418-resistant cells for the
presence of 100K-specific DNA sequences (see below). The PCR yielded
the predicted ~2.3-kb 100K-specific product, which was digested with
EcoRI and XbaI and directionally ligated into the
XbaI and EcoRI sites within pcDNA3 (Invitrogen,
Carlsbad, Calif.), generating pcDNA3/100K. In this manner, the
100K open reading frame was placed under the
expressional control of a CMV enhancer-promoter element. Two
micrograms of the pcDNA3/100K plasmid was linearized with
ClaI restriction enzyme digestion and transfected into 293 cells ([E1+]) by the calcium phosphate method. Transfected cells were
placed into medium containing 800 µg of G-418/ml, and clonal isolates
of G-418-resistant cells were serially expanded. The subclones were
screened for the ability to transcomplement the growth of the
temperature-sensitive (ts) Ad5 100K mutant, H5ts116 (kindly supplied by H. Ginsberg, Columbia
University, New York, N.Y.) at the nonpermissive temperature of 39°C.
Of approximately 35 G-418 resistant cell lines, 1 (referred to as K-16)
was found to be consistently capable of effectively transcomplementing
growth of H5ts116 at 39°C.
Construction of an [E1
,100K
]Ad vector.
The
pAdEasy-1 plasmid (8) was used as a template for the
generation of 100K deletions within the Ad5 genome (8).
Briefly, pAdEasy-1 was digested with BamHI, and the
subfragment containing the right end of the Ad5 genome (Ad5 sequences
21696 to 35995) was isolated and subcloned into
BamHI-digested pcDNA3, yielding pAdE
BamHI. The
latter was digested with NheI to release a 687-bp fragment
within the 100K gene (Ad5 sequences 24999 to 25686) and self-ligated to generate pAdE
BamHI/
100K. The
pAdE
BamHI/
100K plasmid was then digested with
BamHI and ligated to the large BamHI subfragment
of pAdEasy-1, generating pAdE
100K.
A 3.1-kb SalI fragment encompassing the bacterial
-galactosidase (lacZ) gene (kindly provided by W. Koch, Duke University) was ligated into the SalI site of
pShuttleCMV, generating pShuttleCMVlacZ (8).
The lacZ-carrying shuttle plasmid was linearized with PmeI and coelectroporated with pAdE
100K into Escherichia
coli BJ5183. In this manner, targeted recombination between
the two plasmids generated the full-length
[E1
,E3
,100K
]AdlacZ vector genome within a bacterial plasmid. Similarly, we
coelectroporated the pShuttleCMVlacZ plasmid with
pAdEasy-1 to generate the [E1
,E3
]AdlacZ vector-containing plasmid.
Ten micrograms of the respective plasmids was digested with
PacI and transfected either into 293 cells (for generation
of the [E1
,E3
]AdlacZ vector) or into K-16
cells (for generation of the
[E1
,E3
,100K
]AdlacZ vector). Within 1 week of transfection, extensive cytopathic effects were visible in both
cell lines, indicating widespread vector growth and amplification. The
infected cells were harvested and freeze-thawed, and the vectors were
amplified. After infection of 60 150-mm-diameter tissue culture plates,
the respective vectors were purified and twice banded on
CsCl2 gradients, and titers for
lacZ-transducing units were determined as previously described (2).
Replication assays.
The indicated cell lines were infected
at a multiplicity of infection (MOI) of 5 with the respective vectors
and incubated for 2 or 20 h at 37°C, and total DNA was
harvested. Ten micrograms of each sample was digested with
EcoRV and electrophoresed through a 0.7% agarose gel, and
the vector DNA was visualized after ethidium bromide staining.
One-step, limited-burst assay.
Indicated cell lines were
infected at the indicated MOIs with the respective vectors, and total
virus yield was measured by 5-bromo-4-chloro-3-indoyl-
-D-galactopyranoside
(X-Gal) staining of C-7 cells infected with serial
dilutions of the vector-containing lysates, as previously described
(2).
Protein analysis of Ad-infected cell lines.
Indicated cell
lines were infected with each of the vectors at an MOI of 5. Twenty
hours postinfection, the medium was replaced with methionine-free
medium supplemented with [35S]methionine at 90 mCi/ml. The cells were harvested 3 h later, rinsed in
phosphate-buffered saline (PBS), and lysed in 50 mM Tris-HCl (pH
6.8), 4% sodium dodecyl sulfate, and 2%
-mercaptoethanol. The
protein content of the cell lysates was determined against a
protein standard curve via the Bradford assay, and 75 µg of each cell
extract was electrophoresed in a sodium dodecyl sulfate-6.0% polyacrylamide gel. The gel was Coomassie stained and
photographed. Duplicate gels were dried down and subjected to
autoradiography, and the respective proteins were identified based upon
their characteristic molecular weights and analyzed using the SCION
image analysis software package.
Detection of 100K RNA sequences.
Total cellular RNA was
isolated, electrophoretically separated, and ethidium bromide stained
to confirm equivalent loading of the samples. The RNA samples were
transferred to a nylon membrane and probed with the 2.3-kb,
100K-specific, 32P-labeled Ad subfragment derived
from digestion of pcDNA3/100K with EcoRI and
XbaI. The nylon membrane was exposed to autoradiography film, and the image was photographed.
DNA isolation and analysis.
Southern blot analysis was
performed as follows. DNA was extracted from either liver tissues or
tissue culture cells as previously described (11). Twenty
micrograms of total liver DNA from infected mice was digested with
EcoRI, electrophoretically separated, and transferred to a
nylon membrane. Liver DNA isolated from noninfected animals was spiked
with an [E1
]AdlacZ virus genome as a positive control. The membrane was hybridized to a
[
-32P]dCTP-labeled DNA probe (the
~5,300-bp BstXI subfragment of Ad5). The membrane was
washed, exposed to autoradiography films, and photographed.
Noncompetitive, quantitative, Ad-specific PCR.
A total of
400 ng of liver DNA derived from each of the
[E1
,E3
,100K
]AdlacZ-infected mice was
subjected to PCR with the Ad-specific primers
5'-GGTAGCACCACTGCAGAGCTTC-3' and
5'-GGTCACAAGGGCGTCTCCAAG-3', generating a 348-bp product, in
the buffer described above under the following cycling conditions:
94°C for 3 min, followed by 22 cycles of 94°C for 30 s,
annealing at 55°C for 30 s, and extension at 72°C for 1 min.
Equivalent amounts of liver DNA derived from mock-infected mice were
similarly amplified after being spiked with increasing amounts of Ad
DNA to generate a standard curve. The amounts of Ad-specific PCR
product derived from amplification of the infected liver samples were
then determined after comparison to the standard curve data. To further
normalize the assay and be sure that the amount of Ad-specific PCR
product generated was from equivalent amounts of template, identical
amplifications of the experimental DNA samples were carried out
utilizing primers specific for the glyceraldehyde-3-phosphate
deydrogenase (G3PDH) gene (5'-ACCACAGTCCATCGGATCAC-3'
and 5'-TCCACCACCCTGTTGCTGTA-3', generating a 452-bp
product) for 16 cycles of amplification and compared to the amounts of
G3PDH-specific amplification product derived from standard amounts of
mock-infected murine liver DNA. All Ad genome copy numbers were then
normalized to G3PDH concentrations. All PCR products were visualized by
ethidium bromide staining of 1.5% agarose gels after electrophoretic
separation and quantitated with the freeware version of the SCION
imaging software, as previously described (11).
Animal injections, X-Gal staining, and AST-ALT analyses.
Adult (7 to 9 weeks old) C57BL/6 mice (Jackson Laboratories, Bar
Harbor, Maine) were intravenously injected (retro-orbitally) with
either PBS (mock) or PBS containing 4 × 109
lacZ-transducing units of each of the respective vectors.
Animals were killed, and liver tissues were harvested for DNA analysis or processed for X-Gal substrate staining (indicating lacZ
expression) as previously described (10). Serial plasma
samples derived from the infected mice were analyzed for evidence of Ad
vector-induced hepatitis by monitoring aspartate aminotransferase (AST)
and alanine aminotransferase (ALT) levels using the respective
transaminase kits, per the manufacturer's guidelines (Sigma, St.
Louis, Mo.). Statistical analysis were performed using Student's
t test. All animal procedures were done in accordance with
Duke University Institutional Animal Care and Use Committee guidelines.
 |
RESULTS |
Production of E1- and 100K-expressing cell lines.
To fully
investigate the impact that lack of 100K activities might have upon Ad
vector biology, significant deletions within the 100K gene needed to be
engineered. To enable the isolation of these vectors to high quantity
(and in a helper virus-independent fashion), cell lines that could
transcomplement the growth of [100K
]Ad were isolated. To
accomplish this, human 293 cells ([E1+]) were transfected with
a 100K expression plasmid (pcDNA3/100K) (see Materials and
Methods for full details). Cells that had successfully integrated the
pcDNA3/100K plasmid were initially identified by their ability to grow
in high concentrations of G-418. We determined whether the
G-418-resistant cell lines expressed adequate amounts of 100K by
assessing their ability to transcomplement the growth of a 100K
ts Ad mutant, at the nonpermissive temperature of
39oC. Of several G-418-resistant clones,
one (K-16) was found to consistently allow for evidence of
growth of the ts mutant H5ts116 at the
nonpermissive temperature, based upon visualization of virus-induced
cytopathic effects noted in the cells after infection at 39°C (Fig.
1A). DNA isolated from the K-16 cells was
evaluated by a PCR specific for sequences residing within the
pcDNA3/100K plasmid; K-16-derived DNA demonstrated the presence of the
100K-specific sequences, in contrast to the lack of such sequences in
the parental 293 cells (Fig. 1B). Furthermore, total RNA derived from
the K-16 cells contained large amounts of 100K-specific mRNA, compared to the lack of such transcripts in 293 cells (Fig. 1C). Unfortunately, utilization of 100K-specific monoclonal antibodies was not able to
detect 100K-specific peptide within protein extracts derived from K-16
cells (data not shown). At this time we cannot discern whether the lack
of sensitivity was simply due to technical difficulties with the
antibodies utilized or to low levels of 100K protein expression within
the cell lines (see results below).

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FIG. 1.
(A) Cytopathic effects in infected cells. The mutant
virus H5ts116 was utilized to infect various
G-418-resistant cell lines at the permissive temperature of 32°C or
the nonpermissive temperature of 39°C. The K-16 cell line supported
growth of the virus, as evidenced by the onset of cytopathic effect
(+++) at both temperatures. 0 = no cytopathic effect. (B)
Detection of 100K-specific DNA sequences within K-16 cells and not 293 cells. A 100K-specific PCR product at ~2.3 kb was only detected when
DNA isolated from the G-418-resistant K-16 cells was utilized as a
template. The first lane contains a 1-kb DNA ladder, while the control
lane utilized pcDNA3/100K as a positive control template. See Materials
and Methods for full experimental details. (C) Detection of
100K-specific RNA sequences within K-16 cells. A 100K-specific mRNA was
detected only in RNA isolated from G-418-resistant K-16 cells. The
lower half of the figure depicts the amounts of RNA loaded in the gel
prior to transfer to the nylon membrane, demonstrating that both
samples contained equal amounts of intact RNA. See Materials and
Methods for full experimental details.
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Production of [E1
,100K
]Ad vectors in K-16
cells.
To facilitate the construction of [100K
]Ad
vectors, we modified a previously described method for
[E1
,E3
]Ad vector production (8).
Reconstruction of pAdEasy-1 was undertaken (as described in Materials
and Methods) to introduce an extensive deletion within the 100K gene.
The new plasmid was referred to as pAdE
100K (Fig. 2A). Recombination between a shuttle
plasmid (containing the right end of the Ad genome juxtaposed to a
CMV-lacZ transgene cassette) with pAdE
100K allowed
us to generate the full-length
[E1
,E3
,100K
]AdlacZ vector genome
within a bacterial plasmid. PacI restriction enzyme digestion of the plasmid, followed by transfection into K-16 cells, resulted in a productive infection as evidenced by the rapid onset of
widespread cytopathic effects and subsequent high-level amplification and purification by cesium chloride banding. Final concentrations of
the purified
[E1
,E3
,100K
]AdlacZ vector were
similar to those achieved with growth of
[E1
,E3
]Ad vectors in 293 cells (data not shown).
Titers of the [E1
,E3
,100K
]AdlacZ
vector derived from this stock were determined for the number of
lacZ-transducing units and utilized for all subsequent
experiments described below.


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FIG. 2.
(A) Assembly of [100K ]Ad vectors by
homologous recombination in bacterial plasmids. Construction of
[E1 ,E3 ,100K ]AdlacZ was as follows:
step 1, coelectroporate linearized
pShuttleCMVlacZ with
p[E1 ,E3 ,100K ]Ad into E. coli
BJ5183; step 2, screen kanamycin-resistant colonies for identification
of clones containing recombinant
pAd[E1 ,E3 ,100K ]AdlacZ plasmid;
step 3, linearize the
p[E1 ,E3 ,100K ]AdlacZ plasmid with
PacI, releasing the Ad inverted terminal repeat
elements; step 4, transfect PacI-linearized
p[E1 ,E3 ,100K ]AdlacZ into K-16
cells for virus growth; and step 5, serially propagate virus for
conventional Ad vector amplification and purification. (B)
Confirmation of
[E1 ,E3 ,100K ]AdlacZ genome
integrity. K-16 cells were identically infected at an MOI of 5 with
each of the indicated vectors, total DNA was harvested 20 h after
infection, and nearly equivalent amounts were digested with
EcoRV. The genomes of the two vectors are identical
except for the altered migration of the indicated subfragment (*) in
the [E1 ,E3 ,100K ]AdlacZ vector;
the latter fragment encompasses the 100K deletion.
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|
Confirmation of genome integrity as well as the replication potential
of [E1
,E3
,100K
]AdlacZ was compared
to the [E1
,E3
]AdlacZ vector (Fig. 2B). The
results demonstrated that the two vector genomes were identical except
for the presence of the 100K deletion. The results also confirmed the
stability of [100K
] vector genomes despite repeated cycles of
replication and amplification. The latter findings are mandatory
features, required for generation and utilization of clinical grades of
these vectors in the future. Finally, both vectors appeared to be
capable of replicating their respective genomes to near-identical
levels in this experiment.
High-level growth of [100K
] vectors.
Repeated
30-h, one-step burst assays demonstrated that infections of
293 cells with the [E1
,E3
]AdlacZ vectors
yielded amounts of vector near to those obtained after infection of
K-16 cells with the
[E1
,E3
,100K
]AdlacZ vector (Fig.
3). Although these experiments
demonstrated that there was a slight reduction in the absolute yields
of the [E1
,E3
,100K
]AdCMVlacZ from
K16 cells compared to the yield of the
[E1
,E3
]AdlacZ vector in 293 cells, in
practice this did not significantly affect our ability to produce high-titer stocks of the [E1
,100K
]AdlacZ
vector. In contrast, yields of the [100K
] vector were significantly
reduced when identical infections of 293 cells were simultaneously
attempted (Fig. 3). The results confirmed that high-level growth of the
[100K
] vector was critically dependent upon the
transcomplementation of 100K functions provided by the K-16 cell line.
As an additional control, we simultaneously infected 293, C-7, or K-16
cells with an [E1
,E2b
]AdlacZ vector; these
vectors are only capable of being grown to high titers when
transcomplemented for both E1 and E2b functions in C-7 cells
(2). The [E1
,E2b
]AdlacZ
vector was blocked in growth after infection of 293 or K-16 cells (to a
degree similar to that when the
[E1
,100K
]AdlacZ vector was grown in 293 or
C-7 cells) and only grew to high levels when transcomplemented in C-7
cells.

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FIG. 3.
Growth of modified vectors only in
100K-transcomplementing cell lines. The indicated cell lines were
infected at an MOI of 5 and incubated for the indicated time periods.
Infectious virus (as determined by assessing total
lacZ-transducing units yielded from two identical
infections) during viral eclipse (2 h postinfection [2 hpi]) and
after virus replication (30 hpi) were compared.
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Replication and late gene expression of
[E1
,E3
,100K
]Ad vectors.
Our original
hypothesis predicted that Ad vectors with the 100K gene deleted should
not be affected in their ability to replicate their genomes (in the
presence of normal amounts of E1 activity), since the primary
functional roles for the 100K protein are not expressed until after Ad
replication occurs. We therefore infected 293 cells ([E1+]) or K-16
cells ([E1+,100K+]) with the
[E1
,E3
,100K
]AdlacZ vector and
evaluated vector replication (Fig. 4).
Whereas both cell lines had barely detectable levels of input vector
DNA 2 h after infection, high levels of vector-specific DNA
sequences (superimposed upon the cellular DNA genomic smear) were
readily detected in both cells lines 20 h after infection. The
results confirmed that Ad genomes with the 100K gene deleted were fully capable of replicating in the presence of the Ad E1 proteins. The
replication results also demonstrated that Ad genome replication could
be effectively uncoupled from the production of infectious virus simply
by deletion of 100K gene functions, since infection of 293 cells with
the [E1
,E3
,100K
]AdlacZ vector
yielded low levels of virus (Fig. 3).

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FIG. 4.
Replication of
[E1 ,E3 ,100K ]AdlacZ in the
presence of E1. 293 or K-16 cells were infected at an MOI of 5 with
[E1 ,E3 ,100K ]AdlacZ, and total
DNA was electrophoretically separated and visualized after ethidium
bromide staining of the gel.
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Proteins derived from K-16 cells or several noncomplementing cell lines
infected with the [E1
,E3
,100K
]AdlacZ
vector were next compared to identical infections with other classes of
modified Ad vectors. Whereas infection of 293, C-7, or K-16 cells with the [E1
,E3
]AdlacZ vector resulted in
detection of high levels of the hexon, 100K, penton, and fiber proteins
24 h postinfection, identical infections with the
[E1
,E3
,100K
]AdlacZ vector resulted in a significant decrease in the absolute amounts of each of these proteins in 293 or C-7 cells, a defect that was normalized for all
proteins except 100K, when the [100K
] vector infected K-16 cells
(Fig. 5A). Interestingly, 100K protein
was not detected by this method with any of the cell lines tested,
suggesting that even though K-16 cells express low levels of 100K
(relative to that in a wild-type infection), the small amounts actually
expressed are adequate to transcomplement the hexon, penton, and fiber
expression defect of the
[E1
,E3
,100K
]AdlacZ vector. The
results indirectly suggest that wild-type Ad may actually express
excessive amounts of the 100K peptide, much more than is required to
assemble significant amounts of infectious virus, a point elaborated
upon in the discussion.


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FIG. 5.
[E1 ,E3 ,100K ]Ad late gene
expression analysis. The indicated cell lines were infected at an MOI
of 5 with the respective vectors. Duplicate infections were carried
out, and proteins were either not labeled or
[35S]methionine radiolabeled as described in Materials
and Methods. Identical amounts of all proteins derived from the
infections were extracted, electrophoretically separated, and
visualized by either Coomassie staining (A) or autoradiography (B) of
the gels. The locations of the hexon, 100K, penton, and fiber Ad late
proteins are indicated.
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The hexon, 100K, penton, and fiber protein level defects were also
analyzed after a radiolabeling of viral proteins during the late phase
of vector infection of 293 or K-16 cells (Fig. 5B). These experiments
demonstrated that there was at least a 65% decline (based upon
quantitative image analysis of Fig. 5B) in the amount of hexon that was
radiolabeled in 293 cells infected with the
[E1
,E3
,100K
]AdlacZ vector, compared
to infection of 293 cells infected with identical amounts of the
[E1
,E3
]AdlacZ vector. Importantly, K-16
cells infected with the
[E1
,E3
,100K
]AdlacZ vector
demonstrated a nearly normalized restoration of hexon radiolabeling. The results suggest that lack of hexon accumulation in 293 cells infected with the [E1
,E3
,100K
]AdlacZ
vector was due to a lack of adequate synthesis of hexon, possibly
related to the known influences 100K protein has upon late mRNA
translation rates (1, 12, 16). The assay also confirmed an
absence of 100K protein when the
[E1
,E3
,100K
]AdlacZ vector infected
either 293 or K-16 cells. Despite lack of 100K detection, the latter
results again confirmed that K-16 cells express adequate amounts
of 100K, since these cells adequately transcomplemented the
hexon expression defect of
[E1
,E3
,100K
]AdlacZ.
In contrast to the patterns we observed for hexon and 100K, there was
no evidence of significant decreases of radiolabeled penton or fiber
proteins after [E1
,E3
,100K
]AdlacZ
infection of 293 cells (Fig. 5B). The observations suggest that a lack
of stable accumulation of the penton and fiber proteins occurred in
[E1
,E3
,100K
]AdlacZ-infected 293 cells (see Fig. 5A), rather than from a direct effect of 100K upon the
rates of expression and/or translation of penton or fiber per
se. Further studies will be required to fully elucidate the mechanisms
responsible for the latter observations.
The blockade to late gene expression exhibited by the
[E1
,E3
,100K
]AdlacZ in 293 cells was
also qualitatively similar to that observed when a completely
replication-incompetent Ad vector ([E1
,E3
,E2b
]AdlacZ) was utilized to
infect 293 cells ([E1+,E2b
]), as determined by Coomassie
staining of infected cell proteins (Fig. 5A). The
[E1
,E3
,E2b
]AdlacZ vector was
previously demonstrated by our group to produce a profound replication
blockade after infection of 293 cells, which is also responsible for a
significant blockade to late gene expression derived from these vectors
(2). The latter is due to the fact that
cis activation of the Ad MLP and subsequent late gene
expression derived from the MLP are both dependent upon Ad genome
replication (19). The 100K vectors, however, retain the
ability to replicate their genomes, in contrast to
[E1
,E3
,E2b
]Ad vectors, when in the presence of
high levels of E1 activity (Fig. 3) (2, 10).
Analysis of acute liver toxicity and in vivo persistence of
[E1
,E3
,100K
]AdlacZ vector.
Since we were readily able to generate high titers of the 100K-deleted
vector, in vivo studies were undertaken to further discern whether the
late gene expression blockade afforded by deletion of 100K might reduce
the acute hepatotoxicity of Ad vectors in vivo. We first demonstrated
that the [E1
,E3
,100K
]AdlacZ vector
could efficiently transduce hepatocytes in vivo, since >75% of the
hepatocytes were demonstrated to express the lacZ gene 3 days after injection of 4 × 109
lacZ-forming units of the vector (Fig.
6A). The level of transduction was
identical to that noted after injection of similar amounts of the
[E1
,E3
]AdlacZ vector (data not shown). In
contrast to results with the [E1
,E3
]AdlacZ
vector, however, injection of the
[E1
,E3
,100K
]AdlacZ vector resulted in
significantly reduced levels of liver-derived plasma ALT at both 1 and
8 days postinjection, with AST levels also significantly lower 1 day
postinjection (Fig. 7). The
results demonstrated that deletion of 100K reduces the acute
hepatotoxicity of Ad vectors that contain this deletion. The mechanisms
for this are likely several and are detailed in the discussion.

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FIG. 6.
[E1 ,E3 ,100K ]AdlacZ
vector-derived transgene expression and persistence in vivo. (Panel A)
In situ X-Gal staining of
[E1 ,E3 ,100K ]AdlacZ-transduced
murine liver. Liver samples were obtained from mice intravenously
injected with the
[E1 ,E3 ,100K ]AdlacZ vector and
processed for in situ X-Gal staining as described in Material and
Methods. Representative samples from each time point are presented.
Magnification = 100×. Images show samples at 3 (A), 28 (B), 56 (C), and and 84 (D) dpi. (Panel B) Persistence of
[E1 ,E3 ,100K ]AdlacZ vector genome
DNA. Total DNA was extracted from the livers of
[E1 ,E3 ,100K ]AdlacZ-infected
mice at the indicated time points, and Ad vector genome copy numbers
were determined by a noncompetitive, quantitative, Ad-specific PCR. All
values were normalized to G3PDH copy number standards. The amounts of
vector DNA present at 28, 56, or 84 dpi were not significantly
different (P > 0.05). n = 1 at
3 dpi, n = 3 at 28 dpi, and n = 2 at 28 and 56 dpi.
|
|

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|
FIG. 7.
Comparison of AST and ALT plasma levels after
transduction of liver with
[E1 ,E3 ]AdlacZ or
[E1 ,E3 ,100K ]AdlacZ. A total of
4 × 109 lacZ-forming units of the
respective vectors were intravenously injected into mice, and plasma
samples were obtained from the animals at the indicated time points
(n 4 at 1 and 3 dpi; n = 6 at 8 dpi). Similar levels of transduction were confirmed for both
vectors after X-Gal staining of liver samples derived from the animals
(see Fig. 6A and data not shown). Those time points that demonstrated
levels of AST or ALT that were significantly different
(P < 0.05; determined by two-tailed Student's
t test) between the indicated vectors are indicated by
an asterisk.
|
|
Analysis of the infected mice after prolonged periods of time was also
carried out. For example, after intravenous injection of the
[E1
,E3
,100K
]AdlacZ vector, the
number of lacZ-positive hepatocytes decreased from 75 to
100% at 3 days postinfection (dpi) to <5% after 3 months
(Fig. 6A). The lack of lacZ expression was not, however, due
to lack of persistence of the
[E1
,E3
,100K
]AdlacZ vector genome,
since both Southern blot analysis (data not shown) and a quantitative
Ad-specific PCR demonstrated persistence of the vector for up to 12 weeks in all injected animals (Fig. 6B). We concluded that lack of
persistent lacZ expression in
[E1
,E3
,100K
]AdlacZ-infected hepatocytes
was not due to the loss of vector DNA but rather to CMV
enhancer-promoter shutdown-related events, a result that is consistent
with our previous studies with other modified Ad vectors in vivo
(5, 11).
 |
DISCUSSION |
The widespread utilization of [E1
]Ad-based vectors for
gene transfer has enabled researchers to explore the ramifications of
exogenous gene expression in a variety of settings, both with classical
tissue culture experiments as well as with a variety of animal models.
In an effort to improve the efficacy of helper virus-independent Ad
vectors, our group, as well as a number of others, has demonstrated
that sequential elimination of Ad-encoded gene activities can impart
additive improvements to several aspects of Ad vector biology (6,
7, 10, 11, 20, 21). These improvements include reduced toxicity,
prolonged vector genome persistence, increased carrying capacity, and
decreased propensity of the vectors to revert to a
replication-competent, wild-type Ad during serial propagation. As part
of our long-term goal to produce multiply deleted Ad vectors, we have
now demonstrated that inactivating deletions in the 100K gene can be
successfully introduced into Ad vectors without compromising their
ability to be grown to high titers. We subsequently investigated the
ramifications of this particular modification on overall Ad vector biology.
To grow such a virus in a helper virus-independent manner, we isolated
the cell line K-16. K-16 cells were found to be fully capable of
transcomplementing the growth of [E1
,
E3
,100K
]AdCMVlacZ vectors despite
expressing relatively low levels of 100K protein. The results
indirectly suggested that during a wild-type infection, 100K may be
present in an overabundance and that significantly lower levels of 100K
protein can adequately carry out the multiple functions of 100K.
Possibly, the relatively large amounts of 100K protein expressed during
a wild-type Ad infection may be more of a reflection of high-level
transcription of all genes transcribed from the MLP.
Beyond the obvious practical benefits afforded by the physical deletion
of the 100K gene (increased carrying capacity and a decreased
propensity to revert to a wild-type Ad during serial propagation), our
studies demonstrated that [100K
]Ad vectors were fully
capable of replicating their genomes to high levels in the presence of
the E1 genes. However, elimination of 100K transcomplementation (i.e.,
demonstrated after
[E1
,E3
,100K
]AdlacZ infection of 293 cells) significantly diminished the amounts of several of the late
proteins that normally accumulate after Ad replication occurs, as well
as preventing infectious virus production. Several reasons can be
forwarded to explain why hexon expression appears to be affected by
deletion of the 100K gene, based upon the known functions of 100K. For
example, 100K plays several critical roles in facilitating translation
of late mRNAs by direct physical interaction, therefore
[100K
]Ad vectors may have a reduced ability to translate
hexon mRNA (1, 12, 16). It is also known that the 100K
protein physically associates with hexon monomers in the cytoplasm
(facilitating their transport into the nucleus); failure of this
transport mechanism also results in the degradation of hexon monomers
in the cytoplasm (4, 15). We also noted that lack of 100K
function also appeared to decrease the overall accumulation levels of
penton and fiber proteins without affecting the relative rates of
synthesis of these proteins. There are likely several mechanisms for
the latter, likely secondary to lack of adequate hexon expression
and/or capsid assembly by the [100K
] vector.
Incorporation of 100K deletions into [E1
,E3
]Ad
vectors also correlated with diminished hepatotoxicity of the vectors
in vivo, suggesting that Ad late gene expression contributes
to acute Ad vector hepatotoxicity. Our previous results with
[E1
,E3
,E2b
]Ad vectors are consistent with the
results, since the latter have a significantly diminished capability to
express multiple Ad late genes in noncomplementing cells and also have
decreased hepatotoxicity in vivo (10, 11).
Although not formally tested, our results strongly suggested that
[E1+,100K
]Ad vectors (potentially containing transgenes in the E3 region of the Ad genome) can now be constructed and capitalized upon in a variety of settings. Cells that are successfully transduced by the [E1+,100K
] vector would be subject to Ad
genome replication and amplification of the carried transgene by virtue of the presence of the E1 genes within the vector, but due to deletion
of the 100K gene, this class of vector would have a decreased ability
to express Ad late genes and/or produce infectious vector, thereby
decreasing some of the side effects associated with the latter. As a
result, the amount of transgene expression within the infected cells
(in vitro or in vivo) could potentially be greatly amplified, relative
to identical infections attempted with nonreplicating Ad vectors.
Importantly, this may allow for the use of smaller amounts of total
virus to achieve a similar level of transgene expression.
Recently a report described the production of replication-competent Ad
vectors with the protease gene deleted (14). This class of
vector is similar to the 100K-deleted class of Ad vectors, in that
protease-deleted vectors are also capable of replicating their genomes
and incapable of producing infectious virus if the protease gene is not
trans complemented. In contrast to our results with
[100K
] vectors, however, protease-deleted vectors were demonstrated to express wild-type levels of all Ad late genes, despite full deletion
of protease activities (14). Since we have demonstrated (in this and previous studies) that Ad-derived late gene expression can
be associated with significant vector toxicity, the use of 100K
deletions to facilitate Ad replication (in the absence of late gene
expression) may be more desirable than similar attempts utilizing
protease-deleted Ad vectors (10, 14). Studies in our
laboratory are exploring each of these exciting possibilities.
 |
ACKNOWLEDGMENTS |
We thank C. Cepko for the gift of 100K-specific monoclonal
antibodies. We thank B. K. Yeargan for special technical support. Use of the Duke University Tissue Culture Facility, housed in the
Comprehensive Cancer Center, is acknowledged.
A.A. received support from the Duke Children's Miracle Network, the
Muscular Dystrophy Association (USA), and NIH grant DK52925.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Box 2618, MSRB,
Duke University Medical Center, Durham, NC 27710. Phone: (919)
681-6356. Fax: (919) 684-2362. E-mail:
amalf001{at}mc.duke.edu.
 |
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Journal of Virology, July 2001, p. 5913-5920, Vol. 75, No. 13
0022-538X/01/$04.00+0 DOI: 10.1128/JVI.75.13.5913-5920.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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