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Journal of Virology, April 2000, p. 3613-3622, Vol. 74, No. 8
Department of Microbiology and Immunology,
UCLA School of Medicine, Los Angeles, California
90095,1 and F. I. Proctor
Foundation and Department of Ophthalmology, University of
California at San Francisco, San Francisco, California
941432
Received 16 November 1999/Accepted 12 January 2000
Herpes simplex virus type 1 (HSV-1) latent infection in vivo is
characterized by the constitutive expression of the latency-associated transcripts (LAT), which originate from the LAT promoter (LAP). In an
attempt to determine the functional parts of LAP, we previously demonstrated that viruses harboring a DNA fragment 3' of the LAT promoter itself were able to maintain detectable promoter expression throughout latency whereas viruses not containing this element could
not (J. R. Lokensgard, H. Berthomme, and L. T. Feldman, J. Virol. 71:6714-6719, 1997). This element was therefore called a long-term expression element (LTE). To further study the role of the
LTE, we constructed plasmids containing a DNA fragment encompassing the
LTE inserted into a synthetic intron between the reporter
lacZ gene and either the LAT or the HSV-1 thymidine kinase
promoter. Transient-expression experiments with both neuronal and
nonneuronal cell lines showed that the LTE locus has an enhancer activity that does not activate the cytomegalovirus enhancer but does
activate the promoters such as the LAT promoter and the thymidine kinase promoter. The enhancement of these two promoters occurs in both
neuronal and nonneuronal cell lines. Recombinant viruses containing
enhancer constructs were constructed, and these demonstrated that the
enhancer functioned when present in the context of the viral DNA, both
for in vitro infections of cells in culture and for in vivo infections
of neurons in mouse dorsal root ganglia. In the infections of mouse
dorsal root ganglia, there was a very high level of promoter activity
in neurons infected with viruses bearing the LAT promoter-enhancer, but
this decreased after the first 2 or 3 weeks. By 18 days postinfection,
neurons harboring latent virus without the enhancer showed no
A hallmark of herpesviruses is the
ability to establish a lifelong latent infection in their hosts. Herpes
simplex virus type 1 (HSV-1) establishes a latent infection in neurons
of the peripheral nervous system in both their natural host, humans,
and a variety of animal models (29). During the course of
latency, virtually no expression can be detected from the many genes of
the lytic cycle. Instead, only a single region of the viral DNA
expresses RNA transcripts of sufficient quantity to be detected by in
situ hybridization. These viral RNAs are the latency-associated
transcripts (LATs), which originate in a region in the long repeat
elements of the viral genome (6, 7, 25, 27, 32, 33). The latency-associated promoter (LAP) is thought to express a single primary LAT, referred to as the minor LAT, which is then spliced, leading to two abundant RNA species referred to as the major LAT RNAs
(2, 11, 35-38). These major LAT RNAs, of 1.5 and 2 kb, are
stable introns which are antisense to part of the third exon of the
ICP0 mRNA (8, 13).
Since the discovery of the LAT RNAs, there has been speculation about
their function. The strong accumulation of these RNAs in the nuclei of
the latently infected cells in vivo led several laboratories to examine
their role in the establishment and maintenance of latency and
reactivation. Previous studies showed that viruses with the LAT introns
or the LAP deleted were very capable of establishing a latent infection
(19, 20). On the other hand, viruses with part or all of the
LAP deleted were deficient in reactivation from the latent state
(3, 18, 22). Therefore, for many years it was accepted that
LAP mutants grew equally as well as wild-type viruses in sensory
neurons in vivo and established latency as well but failed to
reactivate. However, other reports have questioned this statement and
shown that deletion of LAP reduced the ability of such mutant viruses
to enter the latent state (30, 34), indicating that the LAT
locus may promote latent infection. In addition, another study showed
that mutant viruses unable to produce LATs synthesize productive-cycle
genes in a greater number of neurons in vivo than wild-type viruses do
(16). In that report, the authors hypothesized that this
ability to grow better during the acute infection in vivo could lead to
an enhanced neuronal cell death, which could explain the reduced
frequency for reactivation of the LAT We were interested in how the LAP remains active in latently infected
neurons in vivo whereas all other viral promoters fail to express RNA
after the first week of infection. Previously, we and others have
reported that viruses containing reporter constructs driven by the LAP
only do not remain active well into latency but instead appear to shut
off transcription some time during the first week or two of infection.
We later found that a region downstream of the LAT transcription start
site appeared to restore the ability of the LAP to continue to function
during latency. We term this region of the LAT transcription unit the
long-term expression element (LTE) region (23). In this
study, insertion of a DNA fragment of more than 1 kb between the LAP
and the lacZ gene allowed the LAP to continue to function
throughout latency, as demonstrated by RNase protection assays of
lacZ mRNA. Similarly, Perng et al. showed by reverse
transcription-PCR analysis that viruses harboring the LAT promoter and
the downstream 1.5kb of DNA were able to continue synthesizing RNA
during latency (27). Also, Lachman and Efstathiou showed
that by inserting an IRES element between the LAT promoter and this
region, expression during latency was observed (21).
To further map the LTE function within this large viral DNA fragment,
we wanted to make deletions of this sequence for insertion into
recombinant viruses. Because the lacZ mRNA is rather
unstable, we needed a more sensitive assay for measuring LTE function
during latency. To this end, we placed the DNA fragment encoding the LTE function within an intron. This allowed its insertion between the
LAP and the lacZ gene without disrupting translation of the lacZ mRNA. By this technique, we were able to measure LAP
activity in vivo by measuring Using different recombinant viruses based on this approach, we found
that the LTE region substantially increased LAP activity, both in the
context of plasmid DNA in transient-transfection assays and in the
context of viral DNA. In infections using recombinant viruses in vivo,
the presence of the LTE region enhanced LAP activity during the first
weeks of infection. Thereafter, the activity declined but the presence
of the enhancer kept the LAP far more active throughout latency than
was found in viruses lacking the enhancer. These experiments not only
highlight the existence of a new function within the LAT region but
also may shed some light on the mechanism by which viruses containing
this region continue transcription throughout latency.
Plasmids.
The plasmids used in this study are displayed in
Fig. 1A. Plasmid pHB18 was derived, with
minor modifications, from plasmid pJA1 described previously
(23). It contains the LAP extending from a SmaI
site to a SacII site (positions 117938 to 118843 on the
HSV-1 genome) upstream from the reporter gene lacZ (from
pCH110; Pharmacia). Plasmids pHB22F and pHB22R were derived from pHB18 by first inserting the LTE sequence from a PstI site to a
HpaI site (positions 118862 to 120303) as a
BamHI-BglII fragment into the BglII
site of the intron sequence
(GGATCCAGGTAAGCCTAGATCTCTAACCATGTTCATGCCTTCTTTTCCTAGGATCC) either in the forward (pHB22F) or in the reverse (pHB22R)
orientation and then inserting the LTE-intron sequence as a
BamHI-BamHI fragment into a BamHI site
between LAP and lacZ of pHB18. Plasmid pHB23 was similar to
pHB22F, but the LTE sequence was replaced by an inverted 855-bp DNA
fragment internal to the coding sequence of the I-Sce1 gene
of Saccharomyces cerevisiae. Plasmids pHB17.1, pHB12F, and
pHB12R are the counterparts of pHB18, pHB22F, and pHB22R, respectively,
with the LAP being replaced by the cytomegalovirus (CMV)
enhancer-promoter. Plasmid pHB30F was derived from pHB17.1 by inserting
the LTE sequence (BamHI-BglII fragment) alone in the forward orientation into the BamHI site between the CMV
promoter and the lacZ gene of pHB17.1. Plasmids pHB16,
pHB19F, and pHB19R are the counterparts of pHB18, pHB22F, and pHB22R,
respectively, with the LAP being replaced by the HSV-1 thymidine kinase
(TK) promoter (from a PvuII site at position 48108 to a
BglII site at position 47855).
0022-538X/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Evidence for a Bidirectional Element Located Downstream
from the Herpes Simplex Virus Type 1 Latency-Associated Promoter
That Increases Its Activity during Latency

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ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
-galactosidase (
-gal) staining whereas those harboring latent
virus containing the enhancer continued to show
-gal staining for
long periods, extending to at least 6 months postinfection, the longest
time examined.
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INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
viruses.
-galactosidase activity, an approach
that is both more sensitive and more convenient than the RNase
protection assay.
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References


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FIG. 1.
Graphic map of the DNA structures of plasmids and
viruses. (A) Plasmids were constructed by inserting either the CMV
enhancer/promoter, the LAP, or the HSV-1 TK promoter upstream from the
reporter gene lacZ. The presence of the LTE region and the
synthetic intron are indicated by the LTE box and the splice donor (SD)
and the splice acceptor (SA) sites, respectively. Arrows show the
orientation of the inserted LTE or Sce (internal fragment of
the I-SceI gene of S. cerevisiae) sequences. All
transcriptional units were flanked with sequences from the HSV-1 gC
gene, to allow the recombination at the gC locus of virus KOS
dl1.8 HSV-1 (21), leading to KOS18, KOS22F, and
KOS22R viruses. (B) Complete genome of HSV-1 and an expanded view of
the long internal repeat (IRL). Positions on the HSV-1 genome as well
as the flanking restriction sites of the LAP and LTE sequences used in
this study are also indicated. The bottom line shows the region of the
LAT intron (dark rectangle) and its overlap with the third exon of the
ICP0 mRNA.
Cells and viruses. African green monkey kidney (Vero), rabbit skin (RS), and ND7 cells were maintained in Dulbecco modified Eagle medium plus 10% fetal bovine serum, in Earle's minimum essential medium plus 5% newborn calf serum, and RPMI 1640 medium plus 10% fetal bovine serum, respectively. All media were also supplemented with penicillin and streptomycin and were buffered with sodium bicarbonate. Vero cells were used for selection, propagation, and titer determination of the recombinant viruses. RS and ND7 cells were used for gene expression analysis following transfection of plasmids or productive infection.
The recombinant viruses described in this report, hereafter designated KOS18, KOS22F, and KOS22R, were constructed by recombination at the gC locus between the parental virus KOS dl1.8 HSV-1 (kindly provided by David Leib [22]) and plasmids pHB18, pHB22F, and pHB22R, respectively. These viruses were selected, plaque purified, and produced as previously described (10).Animal inoculation. All animals were manipulated using institutionally approved animal welfare procedures. Experiments were carried out essentially as previously described (10). Briefly, 6-week-old female Swiss Webster mice were anesthetized by ether inhalation and a 10% NaCl solution was injected subcutaneously in the footpads. After 3 h, the mice were anesthetized by intraperitoneal injection of pentobarbital (60 mg/kg). The skin of the footpads was removed, and 107 PFU of the viral stocks was applied on each footpad. The infections were carried out for at least an hour.
Histochemical staining. At the times indicated in Fig. 5, infected mice were euthanized by Halothane inhalation and exsanguinated by transcardiac perfusion with phosphate-buffered-saline (PBS) through the left ventricle after cutting the right atrium. The mouse tissue was fixed with a PBS solution containing 2% formaldehyde and 0.2% glutaraldehyde. The L3 to L6 dorsal root ganglia (DRG) were surgically removed and further fixed for 15 min in the same fixative solution. Histochemical staining was conducted exactly as previously described (10).
Immunohistochemistry.
At the times indicated in Fig. 7, mice
were euthanized by carbon dioxide inhalation and transcardiac perfusion
with PBS (pH 7.2) followed by perfusion with 4% paraformaldehyde in
PBS. The dorsal root ganglia from three experimental animals were then removed, combined, and immersion fixed at 4°C in 4% paraformaldehyde for 1 h. Fixed tissue was then equilibrated with 20% sucrose, embedded in OCT, and frozen in liquid nitrogen (23). Serial sections (6 µm) were cut from frozen ganglia and collected as five
alternative sets onto a Superfrost plus slide (Fisher). The tissue
slides were stored at
20°C.
-galactosidase and HSV
antigen expression, tissue sections were first incubated for 1 h
at room temperature with rabbit anti-
-galactosidase antiserum (Cappel, Durham, N.C.) diluted 1:700 in PBS. Tissue sections were then
sequentially incubated with biotinylated goat anti-rabbit immunoglobulin G (Vector Labs, Burlingham, Calif.) for 1 h,
rhodamine600 avidin D (Vector) diluted 1:1,200 for 40 min, and
biotinylated goat anti-avidin D diluted 1:1,200 for 40 min. After being
washed, the sections were blocked with 10% normal rabbit serum for 10 min and incubated for 40 min with both fluorescein
isothiocyanate-conjugated rabbit anti-HSV-1 (Dako Corp., Carpinteria,
Calif.) diluted 1:100 and rhodamine600 avidin D diluted 1:1,200.
Sections were then washed and mounted with coverslips using Vectashield
(Vector). Stained slides were evaluated using a Nikon fluorescence photomicroscope.
Quantification of
-galactosidase activity.
Tissue culture
plates (60 mm) containing 1 × 106 (transfection) or
3 × 106 (infection) RS (fibroblast) or ND7 (neuronal)
cells were either transfected with 2 µg of DNA of the indicated
plasmids previously mixed with 10 µl of Lipofectin as specified by
the manufacturer (Gibco) or infected at a multiplicity of infection of
3 PFU/cell. At 2 days postinfection (p.i.) or at 2 days
posttransfection the cells were harvested in 200 µl of PBS and
immediately frozen.
-galactosidase assay
(9), using
chlorophenolred-
-D-galactopyranoside (CPRG; Sigma) as
the substrate.
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RESULTS |
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Validation of the intron strategy.
We previously showed that a
DNA fragment 3' of the LAP but within the LAT transcription unit was
able to support long-term expression of the LAP during latency
(23). Because the lacZ mRNA was relatively
unstable, leading to a signal barely detectable by the RNase protection
assay, it was difficult to quantify the effect of the LTE on the
activity of LAP. Another difficulty of the previous assay system is
that the presence of the LTE sequence, inserted between the promoter
and the lacZ coding region, prevented translation of the
lacZ mRNA (23). To address these problems, we
inserted the LTE DNA fragment (positions 118862 to 120303) into a
cassette flanked by the consensus splice donor, branch point, and
splice acceptor sites and cloned the LTE/intron sequence between the
promoters and the lacZ reporter gene (see Materials and
Methods) (Fig. 1A). This construction should allow the LTE region to
function while allowing translation of the reporter gene, which would
increase the sensitivity of our assays. To demonstrate the effect of
the splicing signals on mRNA translation, we inserted the LTE, either
alone or within an intron, between the CMV immediate-early enhancer-promoter and the lacZ gene. We then transfected the
plasmids in RS cells and analyzed the reporter gene expression using an in vitro enzymatic assay to quantify the
-galactosidase activity. As
shown in Fig. 2,
-galactosidase
activity is very high for transfection of a control plasmid in which
the CMV immediate-early enhancer is driving the lacZ gene,
pHB17.1. Insertion of the LTE fragment without flanking intron signals,
pHB30F, blocked the majority of lacZ expression (compare
pHB17.1 to pHB30F). By contrast, insertion of the LTE as an intron
between the promoter and the lacZ gene resulted in
transient-transfection assays with high levels of
-galactosidase
activity. This was true whether the LTE was inserted in the forward
(natural) direction, pHB12F, or in the reverse direction, pHB12R. In
each case, the level of expression was very similar to that obtained
with the CMV-driven lacZ gene, pHB17.1. In other words,
insertion of the LTE within the context of an intron allowed efficient
translation of the lacZ mRNA but did not decrease or
increase the level of expression compared to that obtained with a
plasmid lacking the LTE and splicing signals. From these results, we
conclude that insertion of the LTE without splicing signals prevented
efficient expression of a downstream coding sequence (as stated
previously) and that the LTE/intron sequence merely restored the same
level of CMV promoter-enhancer activity. Therefore, we could apply this
approach to other experiments to further analyze the role of the LTE.
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The LTE region has an enhancer activity for the LAP. To construct viruses containing the LTE/intron in the context of the LAP, we first constructed a set of plasmids and examined their expression in transient-transfection assays. In our previous work, we had inserted a similar but slightly shorter LTE DNA fragment between the LAP and the lacZ gene. As explained in the introduction, this LTE fragment blocked translation of the lacZ mRNA (24). We again transfected this construct, under the CMV enhancer, in pHB30 (see above) and again observed a strong block of translation, which was alleviated when the LTE fragment was placed in an intron. Because we had already shown that the LAP-LTE constructs were not translated, we excluded them from further study here. Instead, a control plasmid, pHB18, was constructed, in which the LAP was placed in front of the lacZ gene (Fig. 1A). The activity of this plasmid was compared to that of two others in which the LTE was inserted in the context of an intron between the LAP and the lacZ gene, in either the forward (pHB22F) or the reverse (pHB22R) direction (Fig. 1A). These three plasmids were transfected into ND7 cells, a neuronal cell line representing a fusion between neuroblastoma cells and a primary culture of neurons originating from DRG. Surprisingly, plasmids containing the LTE within an intron (pHB22F and pHB22R) showed a high increase in lacZ expression compared to the plasmid (pHB18) lacking an LTE (Fig. 3A). Thus, the result of inserting the LTE DNA fragment into an intron between the LAT promoter and lacZ was to increase lacZ expression. To show that this increased expression was due specifically to the LTE, a DNA fragment from the I-Sce1 gene of S. cerevisiae was inserted in the reverse orientation into the intron in place of the LTE, leading to plasmid pHB23. The transient-expression experiment performed with pHB18, pHB22F, pHB22R, and pHB23 in ND7 cells showed that this I-Sce1 DNA fragment was not able to increase the expression of lacZ (Fig. 3B). Therefore, the LTE sequence is able to specifically increase the expression of the reporter gene when placed in an intron between LAP and lacZ, in a manner independent of its orientation. Considering that the LTE, when not placed in the context of an intron, was unable to increase the expression of either the LAT or the CMV enhancer (23) (Fig. 2), it is unlikely that the increased expression of pHB22F and pHB22R over the control pHB18 is due to the activity of a promoter within the LTE. Furthermore, if this activity were due to a promoter, one would expect it to be directional; thus, the fact that both orientations of the LTE increased the level of expression of the LAT promoter also suggests that the LTE does not contribute a promoter-like activity in these transfections.
The LTE enhancer activity is not tissue specific or promoter
specific.
To determine if the LTE functions in a tissue-specific
manner, rabbit skin cells (fibroblasts) were transfected with the three plasmids, pHB18, pHB22F, and pHB22R. The results showed a similar fold
increase in lacZ gene expression for both pHB22F and pHB22R over pHB18 in these cells to that in ND7 cells (Fig.
3A). Therefore, the enhancer function of
the LTE sequence seemed not to be specific to a particular cell line.
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The LTE region increases gene expression in an
orientation-dependent manner during productive infection in vitro.
To study the effect of the LTE region on the activity of the LAT
promoter in the context of the virus, the three plasmids pHB18, pHB22F,
and pHB22R were inserted into the gC locus of HSV-1. Because of the
extensive homology to the two copies of the LTE and LAP in the long
repeat regions, HSV-1 KOS dl1.8, a LAT region deletion virus
described previously by Leib et al. (22), was used as the
parental strain. Recombinant viruses were screened for the insertion of
the lacZ gene and plaque purified a total of five times. The
DNA structure of each recombinant virus was verified by Southern blot
hybridization (data not shown). RS cells and ND7 cells were infected at
a multiplicity of infection of 3 PFU per cell. At 2 days later, the
infected cells were harvested and
-galactosidase activity was
determined using an in vitro enzymatic assay. As shown in Fig.
4, there was no significant difference in
lacZ expression between KOS18 and KOS22R. Only
KOS22F-infected cells showed an increase beyond the control
KOS18-infected cells. Since it has been shown that the ICP4 protein
down regulates the LAP during productive infection by binding to the
ICP4 binding motif at the LAP cap site (1, 2, 14), we assume
that LAP is repressed in all three viruses during the lytic cycle.
Therefore, the lacZ expressions observed with KOS18 and
KOS22R corresponded to a background expression from cells infected with
lacZ coding sequence-containing viruses. As expected from
our previous study of LAP activity, the background expression from
KOS18, KOS22F, and KOS22R is much higher in ND7 than in RS cells
(9).
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The LTE region increased gene expression during acute and latent
infection in vivo.
To examine the effect of the LTE on LAP
expression in vivo, mice were infected via the footpads of the rear
limbs. On days 4 and 12, DRG were removed and analyzed for
-galactosidase activity by in situ staining. As shown in Fig.
5,
whole ganglia stained for
-galactosidase activity showed a large
increase in KOS22F- and KOS22R-infected ganglia compared to
KOS18-infected ganglia at 4 days p.i. By 12 days p.i., both KOS22F and
KOS22R showed less total activity than on day 4 but substantially more
activity than KOS18 on day 12, for which no detectable expression was
observed.
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-galactosidase activity in an in vitro
quantitative assay (CPRG assay). The results showed that at 4 days
p.i.,
-galactosidase activity from KOS22F-infected DRG was 18-fold
higher than from KOS18-infected DRG and 3-fold higher than from
KOS22R-infected DRG (Fig. 6). At 12 days
p.i., however, expression from both KOS22F- and KOS22R-infected DRG were clearly reduced by about 50%. As expected, by 12 days p.i., lacZ gene expression originating from KOS18-infected DRG was
not significantly different from the background level. Also, at 28 days
p.i., no
-galactosidase activity was observed for KOS18-infected DRG. This has been a consistent observation in our laboratory, i.e.,
that just pairing the upstream LAP region to the lacZ gene does not result in long-term expression in vivo (9, 22). By
contrast,
-galactosidase activity could still be detected at 28 days
p.i. for both KOS22F- and KOS22R-infected DRG, although the level of
expression was markedly reduced compared to the expression at 4 days
p.i.
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-galactosidase protein
than did KOS18-infected ganglia. To ensure that the difference in gene
expression observed in KOS18-, KOS22F-, and KOS22R-infected ganglia was
not due to differences in the abilities of the viruses to grow in vivo,
the titers of each virus per time point per mouse were determined. As
shown in Table 1, titers of KOS18,
KOS22F, and KOS22R ranged from 1.8 × 103 to 3.1 × 103 at 4 days p.i., and as expected, no infectious virus
could be recovered at 12 or at 28 days p.i. Thus, the differences in
expression observed on days 4 and 12 were not due to differences in
viral growth.
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Immunostaining for
-galactosidase and viral antigens in infected
DRG.
Margolis et al. have previously shown that by 4 days p.i.
most neurons expressing
-galactosidase from the LAT promoter were in
the latent phase of infection and did not express viral antigen, although a small percentage of neurons expressed both
-galactosidase and viral antigens (24). However, we showed earlier in this report that KOS22F virus was able to express
-galactosidase protein in lytically infected cells in culture. Therefore, it was important to
know if the cells staining for
-galactosidase at 4 or 12 days p.i.
were lytically or latently infected. In the present experiment, DRG
infected for 4 days (KOS22F) or for 12 days (KOS22F and KOS22R) were
sectioned and double stained using antisera against
-galactosidase and viral antigens. As qualitatively illustrated in Fig.
7, no viral antigen-positive neurons were
detected at 12 days after KOS22F or KOS22R infection, confirming our
previous data that no infectious virus could be recovered at that time
(Table 1). By contrast, at 4 days p.i., KOS22F- and KOS22R-infected
ganglia harbored both lytically and latently infected neurons (Fig. 7).
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DISCUSSION |
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During latency, only one transcription unit of the HSV-1 genome is expressed. The LATs are under the control of the LAP, which is constitutively active during the course of the latent state. The reasons why the LAP remains active in latently infected neurons in vivo whereas all the other promoters are shut down are poorly understood. In a previous study, we showed that viruses containing a DNA element located immediately downstream from the transcriptional start site of LAP were able to continue reporter gene transcription during latency whereas viruses lacking this element could not (23). These results were obtained either by in situ staining of or by RNase protection assay on cellular extracts of DRG acutely infected for 4 days.
The initial aim of the present study was to confirm a role of the LTE region in helping the LAP remain active during latency. Using a new approach allowing the expression of a reporter gene situated downstream from a promoter followed by the LTE, we showed that the LTE region contains a surprisingly active enhancer of the LAP. This enhancer activity is bidirectional and increases the activity of the TK promoter as well. The LTE does not increase the activity of the CMV enhancer, but it is not unusual for enhancers to not activate other enhancers.
Another interesting finding in this study is the activity of the LTE in
latently infected neurons. Although the LTE is able to increase the
activity of the LAP within latently infected neurons, the combined
activity of the LAP-LTE substantially decreases between 4 and 28 days
p.i. Despite the loss of activity during this time, the level of
expression of the LAT-LTE viruses at 28 days is considerably higher
than that observed in virus-infected ganglia such as KOS18, which lack
the LTE fragment. Therefore, two things are happening in viruses
harboring the LTE: there is a high level of expression that is slowly
decreased, and the absolute level of expression is higher during
latency. An unresolved question is whether these two things are
manifestations of the same function or whether they derive from two
separate functions. One interpretation of these data is that the LTE
has two functions, an enhancer that functions only transiently and a
long-term expression function. In this model, the LAP in KOS18 is
expressed only during the first week of infection and then is down
regulated by some change, perhaps in the viral chromatin structure.
This results in a gradual loss of
-galactosidase activity until none
is detected by day 28. In KOS22F- and KOS22R-infected neurons, it could
be that the LTE loses its enhancer function as a result of the same
changes that cause the LAP in KOS18-infected neurons to lose activity.
Under this model, the LTE fragment contains a separate, long-term
expression function which keeps the LAP active at approximately the
same level as at 4 days p.i. In that respect, it would be similar to the LTR that we reported previously, which appears to keep the LAP
active throughout latency (24). The fact that KOS22F
expresses much more detectable activity than KOS18 at 28 and 42 days
and 2 and 6 months shows that the LTE exerts a clear difference in long-term expression. Because the enhancer loses activity and yet
viruses containing it remain more active, there is no way at this point
to rule out the possibility of the LTE containing a long-term
expression function in addition to an enhancer. The only way to rule
that out is by a detailed genetic analysis, which is in progress but is
beyond the scope of the present work.
An alternative explanation is that the LTE contains only a single
function, an enhancer. In this model, when the LAP is down regulated
some time during the first week of infection, the LAP-LTE is similarly
down regulated. Under this model, the LAT-LTE has no long-term
function. Instead, the LAT-LTE construct expresses a detectable level
of
-galactosidase protein at 28 days because the initial level of
expression is so much higher than that observed for the
LAT-lacZ constructs. That is, a 20-fold reduction in
expression of the LAP-LTE still results in a level of expression that
is detectable at 28 days p.i. whereas a 20-fold reduction in expression in KOS18-infected neurons results in loss of detectable activity.
At present, we have not distinguished between these two possibilities. In either case, the activity of this enhancer is potentially significant. Recently, authors have shown that there is a latency establishment defect in mouse trigeminal ganglia for viruses with the LAP deleted (35). Another group demonstrated that LAP mutants appear to grow better in neurons in vivo than do wild-type viruses (16). Both of these studies suggested a potential role for the LAT intron in opposing ICP0 function. We have previously shown by transient-expression assays that the LAT intron is capable of blocking ICP0 protein function (13). The very substantial increase in activity it contributes to the LAP comes at a time when the virus is capable of forming either a lytic or a productive infection of the neuron. An enormous increase in transcription by the LAP would result in a very large increase in the concentration of the LAT intron, an RNA molecule that is antisense to the ICP0 mRNA. Thus, the enhancer is in theory capable of exerting an influence on the establishment properties of the virus, perhaps giving the virus a push toward the establishment of a latent infection by increasing the inhibition of ICP0 gene expression.
In these studies, we also observed what appears to be a lytic promoter
activity within the LTE/intron in the forward direction. Since the LAP2
is active during a lytic but not a latent infection (5), it
is conceivable that the increased expression observed by lytic
infection with virus KOS22F may be due to LAP2 activity. If it is due
to LAP2, the increased
-galactosidase protein expression may be
aided by the splicing cassette, in that a cryptic splice donor may
remove start codons between LAP2 and the splice acceptor site. An
alternative explanation for the lytic activity of KOS22F and not KOS22R
is the presence near the 3' end of the LTE of a TATA sequence. This
element could be transactivated by ICP4 or ICP0, and in the reverse
orientation in KOS22R this element would be even further from the
splice acceptor site than would LAP2. In either case, there is no
evidence that either LAP2 or the TATA element is expressed during
latency. Thus, the significance of the lytic activity of KOS22F is doubtful.
There is some evidence in the literature to support a role for the region as being an enhancer as well as playing a role in the lytic cycle. Previous work has shown that motifs in the LAP2 region of HSV-1 were able to bind HMG1(Y) proteins, thus facilitating the binding of Sp1 transcription factors (15). HMG1(Y) proteins do not possess an intrinsic transactivator activity. However, they are known to bind DNA and to alter the DNA structure (12). This DNA-bending activity is thought to remodel the promoter region so that it becomes more active (31). In our model, binding of both HMG1(Y) and Sp1 factors to the LAP2 region (corresponding approximately to the first half of our LTE region) would lead to remodeling of LAP1, thus increasing its activity. As expected, this type of enhancer would be independent of its orientation and would not be specific to a promoter or to a cell line since cellular extracts from both HeLa cells and a neuroblastoma cell line (B103) were able to protect the same region in LAP2 (15).
Recent studies have also shown that HMG1(Y) proteins served as a coactivators of the HSV-1 ICP4 transcriptional factor in vitro (4, 26), leading to augmentation of the ICP4 activity. Thus, it is possible that binding of HMG1(Y) proteins within LAP2 would recruit the ICP4 transactivator when it is synthesized during productive infection. The LAP2 region would therefore become a very efficient promoter in the course of the lytic cycle, but the role of this region would be mainly an enhancer activity for LAP1 during latency.
Finally, we note that some recombinant viruses that are deleted in the
LTE region are also inactive for reactivation from latency. Both the
StyI mutant used by Fraser and colleagues (18a) and the
348 virus used by Bloom et al. (3) are defective in reactivation from latency. Both of the deletions are in the RNA sequence 5' of the intron, within the LTE region, and in both cases it
has been difficult to ascribe a molecular reason for the effect of the
deletion on reactivation. It will be interesting to determine if the
cause of the failure of these viruses to reactivate may be due to the
absence of an enhancer function.
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ACKNOWLEDGMENTS |
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We especially thank David Leib, Washington University, St. Louis, Mo., for generously providing KOS dl1.8. We also thank Adam Weidera for excellent technical support.
These experiments were supported by NIH grants AI28338 to L.T.F. and Ey10008 to T.M.
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FOOTNOTES |
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* Corresponding author. Mailing address: Department of Microbiology and Immunology, 43-169CHS, UCLA School of Medicine, Los Angeles, CA 90095-1405. Phone: (310) 206-1014. Fax: (310) 206-3865. E-mail: lfeldman{at}microimmun.medsch.ucla.edu.
Present address: Centre de Genetique Moleculaire et Cellulaire,
UMR5534 CNRS, Université Claude Bernard Lyon 1, Villeurbanne Cedex, France.
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