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Journal of Virology, February 2000, p. 1694-1703, Vol. 74, No. 4
0022-538X/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Multiepitopic B- and T-Cell Responses Induced in
Humans by a Human Immunodeficiency Virus Type 1 Lipopeptide
Vaccine
Hanne
Gahéry-Ségard,1,*
Gilles
Pialoux,2
Bénédicte
Charmeteau,1
Sandrine
Sermet,1
Hubert
Poncelet,2
Maurice
Raux,3
André
Tartar,4
Jean-Paul
Lévy,1
Helene
Gras-Masse,5 and
Jean-Gérard
Guillet1
Laboratoire d'Immunologie des Pathologies Infectieuses et
Tumorales, INSERM Unité 445, Institut Cochin de
Génétique Moléculaire, Université Renée
Descartes, Hôpital Cochin, 75014 Paris,1
Hôpital de l'Institut Pasteur, 75015 Paris,2 Laboratoire de
Séro-Immunologie Clinique, Pasteur Mérieux Connaught, 27101 Val de Reuil Cedex,3 and CNRS
URA1309, Institut de Biologie,4 and UMR
8525 CNRS-Université Lille II,5
Institut Pasteur de Lille, 59021 Lille Cedex, France
Received 29 July 1999/Accepted 10 November 1999
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ABSTRACT |
We have attempted to develop an anti-human immunodeficiency virus
(HIV) lipopeptide vaccine with several HIV-specific long peptides
modified by C-terminal addition of a single palmitoyl chain. A mixture
of six lipopeptides derived from regulatory or structural
HIV-1 proteins (Nef, Gag, and Env) was prepared. A phase I study was
conducted to evaluate immunogenicity and tolerance in lipopeptide
vaccination of HIV-1-seronegative volunteers given three injections
of either 100, 250, or 500 µg of each lipopeptide, with or
without immunoadjuvant (QS21). This report analyzes in detail B-
and T-cell responses induced by vaccination. The
lipopeptide vaccine elicited strong and multiepitopic B-
and T-cell responses. Vaccinated subjects produced specific
immunoglobulin G antibodies that recognized the Nef and Gag proteins.
After the third injection, helper CD4+-T-cell responses
as well as specific cytotoxic CD8+ T cells were also
obtained. These CD8+ T cells were able to recognize
naturally processed viral proteins. Finally, specific gamma
interferon-secreting CD8+ T cells were also detected ex vivo.
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INTRODUCTION |
Despite the decrease in mortality
among humans infected with human immunodeficiency virus type 1 (HIV-1)
due to new antiretroviral agents, development of an effective vaccine
to prevent HIV infection remains a high priority, since the vast
majority of individuals do not have access to these new treatments and
new infections continue to occur.
Many candidate vaccines have been tested in experimental models over
the last 10 years, but to date potent protective immunity has been
obtained only with attenuated live simian immunodeficiency virus in
macaques (12, 14). Although safety issues remain a major
concern when using attenuated live vaccines, this study may help to
clarify how protective immunity against AIDS is induced. Most of the
candidate HIV-1 vaccines which have undergone clinical trials have been
based on envelope subunit vaccines. The results of these trials have
indicated that such vaccines did not induce a neutralizing antibody
response that cross-reacted with primary HIV-1 isolates.
Moreover, these envelope vaccines are ineffective in eliciting a
CD8+ cytotoxic T-lymphocyte (CTL) response (13).
Vaccines using live recombinant poxvirus constructs are more potent CTL
immunogens, and human phase I studies have investigated immune
responses to canarypox clade-B-based ALVAC-HIV-1 recombinants (2,
9). Peripheral blood mononuclear cells (PBMC) in some volunteers
demonstrated CTL activity, but their responses remained limited and
cross-reactive CTL activity was detected in only a few of the
responders. Moreover, some individuals became infected with HIV-1
despite vaccination with the recombinant HIV gp120 subunit
(4). On the other hand, CD4+ T cells play a
pivotal role in the development of the immune response by secreting
various cytokines involved in the induction and maturation of humoral
and cellular immunity. Therefore, it would be critical to evaluate the
Th1-Th2 balance and to quantify HIV-specific CD4+ T cells
obtained after vaccination.
We have developed a new HIV-1 vaccine based on lipopeptides. Several
experiments have shown that cellular and humoral immune responses can
be induced in mice (22, 29), in primates (1, 24),
and in humans (20, 33) by means of simple lipopeptide vaccines. The frequency and duration of the CTL response are directly influenced by the presence of potent CD4+ epitopes
(20, 23, 27, 33). We therefore constructed an anti-HIV
lipopeptide vaccine which consisted of a total of six long amino acid
sequences derived from regulatory or structural HIV-1 proteins (Nef,
Gag, and Env), containing altogether 50 to 60 different major
histocompatibility complex class I-specific CTL epitopes. These
epitopes have been identified in Nef, Gag, and Env proteins by the
CTL responses of naturally infected patients or from the structural
characteristics of major histocompatibility complex-peptide
interactions. The CTL epitopes corresponded to the total of the
epitopes that we were able to identify in the six long peptides.
Some sequences of these HIV epitopes may be found in the NIH
molecular database and in two recent publications (6,
7; HIV Molecular Immunology Database
[http://hiv-web.lane.gov/immuno/index.html]). Other
sequences have been defined by a biochemical assay (3, 5).
These amino acid sequences also contained CD4+ T-cell and
B-cell epitopes. The six sequences were modified in the C-terminal
position by adding a palmitoyl-lysylamide group and formulated as
lyophilized mixed micelles (15).
In the present work, we have conducted a phase I study to evaluate the
immunogenicity and tolerance of our lipopeptide vaccine in
HIV-1-seronegative volunteers who were given three injections of
either 100, 250, or 500 µg of each lipopeptide with or without an
adjuvant (QS21). Strong and multiepitopic B- and T-cell responses were obtained.
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MATERIALS AND METHODS |
Sequences and synthesis of lipopeptides.
The following three
lipopeptides obtained from HIV-LAI Nef proteins were synthesized: L-N1
(Nef amino acids [aa] 66 to 97), L-N2 (Nef aa 117 to 147), and L-N3
(Nef aa 182 to 205). Two lipopeptides derived from HIV-LAI Gag proteins
were also synthesized, L-G1 (Gag aa 183 to 214) and L-G2 (Gag aa 253 to
284). Finally, we prepared one lipopeptide derived from an V3-ENV gp120
consensus sequence that is also found in the HIV-BX08 strain, L-E (Env
aa 303 to 335). Each lipopeptide was synthetized by BACHEM
Feinchemikalien (Bubendorf, Switzerland). The lipopeptides were
formulated as mixed micelles, solubilized in 80% acetic acid at 20 mg/ml, mixed, and subjected to sterilizing filtration under GMP
conditions (Sterilyo, Saint-Amand-les-Eaux, France). The solution was
distributed into individual vials, lyophilized, and stored under
nitrogen. The water solubility of the vaccine doses was confirmed after
reconstitution with 1.3 ml of water or 5% isotonic glucose solution,
yielding a slightly opalescent solution (pH 4.93). The lipopeptide
components, their impurity profiles, and the vaccine candidate were
analyzed by high-pressure liquid chromatography, Edman sequencing,
electrospray mass spectrometry, and nuclear magnetic resonance
spectroscopy. The preclinical safety of the product was assessed by
extensive toxicological studies (15). The amino acid
sequences, molecular weights, and numbers of the six lipopeptides are
listed in Table 1.
Long and short peptides.
The following long peptides
corresponding to the lipopeptide immunogens were also synthesized in
one of our laboratories (UMR 8525 CNRS, Lille, France): N1 (Nef aa 66 to 97), N2 (Nef aa 117 to 147), N3 (Nef aa 182 to 205), G1 (Gag aa 183 to 214), G2 (Gag aa 253 to 284), and E (Env aa 303 to 335). Short
peptides overlapping the lipopeptide sequences and known to be minimal
CTL epitopes were synthesized by Neosystem (Strasbourg, France). We
used Nef 121 to 128, Nef 137 to 145, Nef 184 to 191, and Nef 195 to 202 (HLA-A1 restricted); Nef 136 to 145, Nef 190 to 198, Gag 183 and 191, and M 58 to 66 (HLA-A2 restricted); Nef 73 to 82, Nef 84 to 92, and EBN
416 to 424 (HLA-A11 restricted); Nef 90 to 97 and Nef 182 to 189 (HLA-B8 restricted); Nef 134 to 141 and Gag 263 to 272 (HLA-B27
restricted); and Nef 135 to 143 (HLA-B18 restricted). The 16 CTL
epitopes mentioned above cover the range of HLA class I alleles
present in the vaccinated subjects tested by an enzyme-linked immunospot (ELISPOT) assay (see Table 6).
Immunization protocol and study design.
HIV-negative
volunteers were selected by the National French Agency for AIDS
Research (ANRS). Written consent was obtained from each volunteer, and
the nature and consequences of the studies were also explained. The
volunteers enrolled in the Vac 04 ANRS study were chosen to belong to
non-HIV-exposed groups. Moreover, a classic clinical investigation was
performed to determine the HIV serology of the volunteers.
Enzyme-linked immunosorbent assays (ELISA) and Western blots were
performed on the sera of all the volunteers before immunization. Two
different ELISA kits were used: one from Abbott (HIV-1/HIV-2 EIA
Third-Generation Plus) and one from Vironostika (HIV Uni-form II Ag/Ab;
Organon Teknika, Durham, N.C.). The HIV-1-negative status was also
defined by Western blotting with the Cambridge Biotech (Worcester,
Mass.) HIV-1 Western blot kit. Finally, serology to HIV-1 and HIV-2 was
determined by using the HIV blot 2.2 kit (Genelabs Diagnostics,
Singapore Science Park, Singapore).
The phase I clinical trial was defined as a dose escalation study
starting with 100, 250 µg, and 500 µg of the six lipopeptides to
determine the clinical tolerance. Because the low dose was well
tolerated, the vaccine trial was continued with the high dose. The QS21
adjuvant was added to determine the influence of this adjuvant on
induction of the immune response by lipopeptides. Volunteers were
immunized by intramuscular injection of a mixture of six lipopeptides
with or without QS21 adjuvant. All volunteers were immunized three
times with the six lipopeptides at 0, 4, and 16 weeks. The dose of
lipopeptides injected varied from one subject to another. Volunteer
V4.6 was given 250 µg of each lipopeptide, whereas V4.16, V4.17,
V4.18, V4.23, and V4.28 were immunized with 500 µg of each of the six
lipopeptides. On the other hand, volunteers V4.5, V4.1, V4.19, V4.21,
V4.32, and V4.34 were immunized with the six lipopeptides in QS21
adjuvant. V4.5 received 100 µg of each lipopeptide, and the other
five volunteers received 500 µg of each lipopeptide. Blood samples
were collected prior to immunization (week 0) and during week 20, after
the third immunization. PBMC and serum were separated by standard
methods and frozen. The complete results obtained with 12 volunteers
are presented in this report.
Anti-HIV peptide IgG antibodies detected by ELISA.
Polystyrene plates (Nunc, Roskilde, Denmark) were coated with 5 µg of
long peptides (N1, N2, N3, G1, G2, and E) per ml. Diluted (1/100) sera
were detected with alkaline phosphatase-conjugated goat anti-human
immunoglobulin G (IgG) (1/5,000; Sigma). Phosphatase activity was
measured with 4-methylumbelliferyl phosphate as the substrate (Sigma),
and fluorescence was read at 360/460 nm in a Victor multilabel counter (Wallac).
The baseline value differed for each long peptide and was obtained for
each serum sample prior to immunization. In the majority of cases, the
baseline ranges (in fluorescence units) were as follows: N1, 2 × 103 to 23 × 103; N2, 2 × 103 to 15 × 103; N3, 2 × 103 to 23 × 103; G1, 2 × 103 to 21 × 103; G2, 2 × 103 to 19 × 103; and E, 2 × 103 to 36 × 103; and in 10 to 20% of
cases the baseline was 40 × 103 fluorescence units.
Because we looked for induction of humoral responses after
immunization, we took into account the values that gave a fluorescence
value at least twice the baseline. The sera taken from each volunteer
prior to and after immunization were tested three times by ELISA in
independent experiments.
Anti-Nef and anti-Gag antibodies detected by Western
blotting.
Sodium dodecyl sulfate-polyacrylamide gel
electrophoresis (SDS-PAGE) was carried out on 10% acrylamide gels
(Bio-Rad, Ivry-sur-Seine, France) as already described (11).
The Nef protein (produced by Escherichia coli) was visible
as a 25- to 27-kDa doublet in SDS-PAGE. Immunoblotting was carried out
for Nef protein, using human sera diluted 1/100. Horseradish
peroxidase-labeled goat anti-human IgG (The Binding Site, Birmingham,
United Kingdom) and a chemiluminescent substrate (Luminol, Amersham,
France) were used to detect the reaction. Anti-Gag antibodies were
detected with a commercial kit (New Lav Blot I; Sanofi, Diagnostics Pasteur).
Anti-HIV peptide proliferative T-cell responses.
Fresh
CD4+ and CD8+ PBMC (105/well) were
cultured in complete medium with either 1 or 0.2 µg of soluble
peptides (N1, N2, N3, G1, G2, and E) per ml and set up in
quadruplicate. Proliferation was determined in culture on day 5 by
adding 1 µCi of [3H]thymidine (NEN Life Science
Products, Paris, France) per well. The capacity of the PBMC to
proliferate in vitro was checked in independent cultures carried out
for 5 days with PHA, PPD, TT, and SEB at two concentrations (10 µg/ml
and 1 µg/ml).
Depletion of CD4+ and CD8+ T cells was
accomplished in PBMC by using anti-mouse immunoglobulin and complement.
Briefly, 107 PBMC were incubated in 1 ml of SAB-free medium
for 30 min at 4°C with 2 µg of anti-CD4 monoclonal antibodies (OKT4
[Orthodiagnotic Systems] and BL4 [Immunotech]) or anti-CD8
monoclonal antibodies (OKT8 [Orthodiagnotic Systems] and UCHT-4
[Sigma]). Rabbit serum complement (1 ml; Hoechst Behring, Reuil,
France) was added to the cells for 45 min at 37°C. The
CD4+ and CD8+ cells enrichments were analyzed
by flow cytometry.
Generation of CTL lines.
PBMC were stimulated in vitro by
mixing 106 PBMC (responder cells) with 106
irradiated stimulating cells (autologous PBMC were incubated overnight
with 10 µg of each long peptide per ml) in complete RPMI culture
medium (RPMI 1640 supplemented with 100 U of penicillin per ml, 100 µg of streptomycin per ml, 2 mM L-glutamine, 1 mM sodium
pyruvate, 10 mM HEPES, nonessential amino acids, and 10% heat-inactivated SAB). Interleukin-2 (10 U/ml) was added on day 3. Responder cells were restimulated every week for 3 or 4 weeks, using
autologous PBMC incubated with peptides (prepared as on day 0) in
medium supplemented with 10 U of interleukin-2 per ml. The CTL were
tested by using the autologous Epstein-Barr virus (EBV) cell line as
targets incubated overnight with 10 µg of each long peptide (N1, N2,
N3, G1, G2, and E) per 106 cells. We did not have enough
cells to test all the CD8+ T cells in a
51Cr-release test (CRT) assay at the same
effector-to-target-cell (E/T) ratio. However, we tested the CTL
activity at an E/T ratio of 100-140 whenever it was possible. Only the
CTL reactivity positive at a E/T ratio of 2 has been taken into account
and, the results given at one E/T ratio are significant and
representative. All the PBMC were tested after three stimulations; one
more stimulation was given when the CTL activity was negative after 3 stimulations. The positive CTL activity obtained after three
stimulations was confirmed after four stimulations, and the positive
CTL activity obtained after four stimulations was confirmed after five
stimulations. We always used as control the PBMC taken prior to immunization.
To obtain target cells presenting HIV gene products, EBV targets were
infected overnight at 106 cells/ml with wild-type vaccinia
virus (WT) or with HIV-1 LAI (clade B), HIV-1 MN (clade B), HIV-1
Bangui (clade A), or HIV-2 ROD Nef recombinant vaccinia virus (20 PFU/cell). The various targets (106 cells) were then washed
and labelled with 100 µCi of
Na251CrO4 (NEN Life Science
Products). Cytolytic activity was determined in a standard 4-h
51Cr-release assay. The average spontaneous release never
exceeded 20% of the total 51Cr incorporated. Results were
expressed as specific Cr release, i.e., 100 × (experimental
counts per minute
spontaneous counts per minute)/(maximum
counts per minute
spontaneous counts per minute).
IFN-
ELISPOT assay.
Ninety-six-well nitrocellulose plates
(MultiScreen-HA; Millipore S.A., Molsheim, France) were coated
overnight at 4°C with 5 µg of mouse anti-human monoclonal antibody
(Genzyme Corp., Cambridge, Mass.) per ml. The wells were washed in
phosphate-buffered saline and saturated with complete RPMI medium.
Freshly separated or cryopreserved PBMC were added (triplicate assay;
2 × 105 cells per well) with various minimal
CD8+ epitopic peptides (10 µg/ml) and incubated for
24 h at 37°C under 5% CO2. The plates were then
washed and incubated for 2 h with 100 µl of polyclonal rabbit
anti-human IFN-
antibody (1/250; Genzyme). After washing, an
anti-rabbit IgG-biotin conjugate (1/500; Boehringer Mannheim France
S.A., Meylan, France) was incubated for 1 h. Finally, alkaline
phosphatase-labelled extravidin (Sigma-Aldrich Chimie S.A.R.L, St
Quentin Fallavier, France) was added for 1 h. A 100-µl volume of
chromogenic alkaline phosphatase substrate (Bio Rad Laboratories,
Hercules, Calif.) was added to each well to develop spots. Blue spots
were counted under a microscope. Negative controls consisted of PBMC
incubated in medium alone or with HLA-mismatched CD8+
epitopic peptides derived from HIV. Positive controls consisted of the
activation of PBMC with 50 ng of phorbol myristate acetate per ml and
500 ng of ionomycin per ml (100 to 300 PBMC per well) or 10 µg of PHA
per ml (10,000 cells per well). These strong mitogenic stimuli were
used to evaluate the viability of the T lymphocytes to check the
quality of the freezing. We also used positive-control HLA-matched
epitopic peptides derived from EBV and influenza virus.
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RESULTS |
Safety of the lipopeptide vaccine.
As reported elsewhere,
injections of lipopeptides were well tolerated and did not produce
systemic symptoms. Injection of the lipopeptides resulted only in local
erythema around the site of inoculation, which persisted for between 24 and 48 h in most patients. Further details concerning clinical
data will be published elsewhere.
Induction of a humoral response to HIV-1 long peptides.
Serum
samples were collected prior to vaccination (week 0) and during week
20, after the third injection. Sera were assayed for anti-Nef (N1, N2,
and N3), anti-Gag (G1 and G2), and anti-Env (E) long peptide IgG
antibodies by ELISA (Table 2). After
three injections, anti-N1 and anti-N2 IgG antibodies were detected in vaccinated subjects. Anti-N1 antibody responses were found in 5 of the
12 volunteers, with titers varying from 2 to 7 times that of the week 0 sera. The antibody response to N2 was positive in 10 of the 12 volunteers, with titers varying from 2 to at least 20 times. Finally,
no anti-N3 IgG was detected in the sera of any of the volunteers.
The sera were then assayed for anti-G1 and anti-G2 IgG antibody
responses. All 12 volunteers remained negative to G1 peptides even
after three injections, without or with adjuvant (QS21). In contrast,
anti-G2 IgG antibodies were detected in the sera of all 12 vaccinated
subjects, with titers varying from 2-fold to more than 40-fold times
for six volunteers.
Finally, specific anti-E peptide antibodies were detected in the sera
of two volunteers immunized without adjuvant as well as in the sera of
five volunteers immunized with QS21.
The sera of 10 HIV-1-seropositive patients were also assayed by ELISA
under the same experimental conditions to compare anti-Nef, anti-Gag,
and anti-Env long-peptide IgG antibody responses. The results were
clearly different (data not shown); there was little IgG specific to
the three Nef peptides (N1, N2, and N3) in these patients. Three of
them had weak responses to the G1 peptide but no antibodies specific to
the G2 peptide. In contrast, the sera of 9 of the 10 seropositive
patients revealed a high level of specific anti-E peptide IgG antibodies.
Humoral response to the Nef, Gag, and Env proteins.
Sera from
vaccinated subjects who induced specific IgG antibodies that recognized
the Nef, Gag, and Env peptides contained in the vaccine were checked
for their capacities to recognized the corresponding proteins. First,
to determine whether N1, N2, and N3 peptide immunization induced IgG
antibodies that reacted with the whole Nef protein, we assayed serum
samples by Western blotting (Fig. 1). No
IgG specific to the Nef protein were detected prior to immunization,
whereas the Nef protein was recognized by sera collected on week 20 from eight volunteers (five immunized with and three immunized without
QS21).

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FIG. 1.
Immunoblot pattern of serum specific for Nef protein.
Suspensions of recombinant NEF protein (10 µl) harvested from
E. coli production were separated by SDS-PAGE. Sera (diluted
1/100) collected from volunteers before (W0) and after (W20)
immunization were tested and revealed with a sheep horseradish
peroxidase-labeled anti-human immunoglobulin conjugate (1/2,000).
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Second, there was a strong humoral response to P25 Gag protein in the
sera of 9 of the 12 vaccinated subjects collected on week 20 (Fig.
2). Of these, sera from seven subjects
had anti-P25 as well as anti-P40 and anti-P55 IgG antibodies (immature
form of Gag protein). Moreover, it seems that sera from subjects
vaccinated with lipopeptide in adjuvant induced a greater IgG antibody
response to Gag protein than did sera from volunteers immunized with
lipopeptides alone (Fig. 2).

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FIG. 2.
Patterns of IgG specific for Gag protein were detected
by using a commercial kit (New Lav Blot I; see Materials and Methods).
Sera (diluted 1/100) collected from volunteers at different time points
(W0 and W20) were tested for the presence of anti-HIV-1 Gag protein IgG
antibodies. We could detect the mature Gag protein (P25) and the two
precursors (P40 and P55).
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Because of the importance of Env protein in the induction of
neutralizing or facilitating antibodies, we assayed anti-Env protein
IgG antibodies. None of the sera from vaccinated subjects recognized
the gp120 and gp160 proteins, and they could be readily differentiated
from the sera from HIV-seropositive patients with a commercial HIV
detection kit (Fig. 2). Finally, no neutralizing antibodies were
detected in the sera of the 12 vaccinated subjects (data not shown).
HIV-1 peptide-specific helper T-cell response.
Proliferative
responses to soluble long peptides obtained with PBMC from vaccinated
subjects are shown in Table 3. The Nef, Gag, and Env long peptides caused proliferation only with the PBMC from
vaccinated donors, whereas no proliferation was found prior to
vaccination. The PBMC of 9 of the 10 volunteers immunized (with or
without QS21) proliferated against at least one peptide after three
injections (Table 3).
Induction of proliferation in response to N1 was observed with the PBMC
of 5 of the 10 volunteers, with indices varying from 3.4 to 24.3. The
proliferative response to N2 was positive for only 1 of the 10 volunteers. Finally, proliferation to the N3 long peptide was observed
with PBMC obtained from 4 of the 10 vaccinated volunteers, with indices
varying from 3.3 to 21.
PBMC collected from the volunteers were then assayed for proliferation
to G1 and G2 long peptides. Only PBMC from 2 of the 10 volunteers
proliferated in response to G1 peptide after immunization. In contrast,
proliferation in response to the G2 long peptide was obtained with PBMC
of 9 of the 10 vaccinated subjects, with proliferative indices varying
from 3.6 to at least 10 for four of them. Finally, specific
proliferative responses to the E long peptide were observed in the PBMC
of 6 of the 10 volunteers. It is of particular interest that PBMC of
vaccinated volunteers preferentially proliferated in response to G2 (9 of 10), E (6 of 10), N1 (5 of 10), and N3 (4 of 10) long peptides. In
contrast, PBMC from only 1 and 2 of the 10 volunteers proliferated in
response to N2 and G1 long peptides, respectively.
Note that the depletion experiment carried out with PBMC from
vaccinated subjects showed that proliferation of PBMC collected at week
20 was preferentially mediated by CD4+ T cells (data not shown).
Induction of HIV-specific CTL activity.
Tables
4 and 5
show the results of repeated and representative experiments of
cytotoxicity activity tested in 12 vaccinated subjects immunized with
or without QS21 adjuvant. Specific CTL activity was detected in PBMC
collected from 9 of the 12 subjects after immunization. Among the PBMC
from these nine vaccinated subjects, four generated CTL specific to one
peptide, four generated CTL specific to two peptides, and one generated
CTL specific to three peptides. All six long peptides contained in the
vaccine were recognized at least by PBMC from one positive volunteer. The G2 and E lipopeptides appeared to be especially immunogenic; they
were respectively recognized by PBMC from four and five volunteers.
To find whether the effector cells were CD8+ T cells, as
might be expected for class I-restricted antigen-specific CTL, we removed CD8+ or CD4+ T lymphocytes from the
PBMC and conducted a cytotoxicity test. Depletion experiments were
performed in half of the samples presenting CTL reactivity to the HIV
peptides. The PBMC from the other vaccinated volunteers could not be
tested because of a limited quantity of cells. Only the results
obtained for vaccinated volunteer V4.1 are shown (Fig.
3). The positive anti-N1, anti-G2, and
anti-E CTL obtained after four stimulations with PBMC (week 20) from volunteer V4.1 were stimulated one more time with the respective long
peptides. The CD4+ and CD8+ depletions were
performed after five stimulations to obtain more cells, i.e., after one
more stimulation than the result shown in Table 5. PBMC and
CD8+ cells from V4.1 (Fig. 3) efficiently lysed autologous
EBV cells incubated with HIV-peptides. CD8+ enrichment
increased the percentage of specific lysis for anti-N1 and anti-G2 at
different E/T ratios. These results confirmed that anti-HIV cytotoxic
activity was mediated by CD8+ T cells. However, we observed
that the lytic activity of PBMC for anti-E CTL activity was
substantially greater than in purified CD8+ T cells,
suggesting that another population, like NK cells, could mediate part
of the lytic activity observed.

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FIG. 3.
The positive anti-N1, anti-G2, and anti-E CTL obtained
after four stimulations with PBMC (W20) from volunteer V4.1 (results
shown in Table 5) were stimulated one more time with the respective
long peptides to obtain more cells. To determine the fine nature of
effector cells in response to these peptides, T-cell depletion was
performed with anti-CD4 or anti-CD8 antibodies and complement 1 week
after the last stimulation. Target cells (EBV infected) were sensitized
with the N1 (A), G2 (B), or E (C) long peptides. The HIV-1-specific CTL
from volunteer V4.1 were analyzed at an E/T ratio of 1.5:1 to 40:1.
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We also tested the possibility that immunization with lipopeptides
was able to generate CD8+ epitopes that were expressed
on infected cells by determining whether these CTL recognized and lysed
virus-infected cells. Thus, PBMC from volunteer V4.5 (QS21) collected
during week 20 were stimulated three times each with the Nef, Gag, and
Env long peptides and tested for CTL activity against EBV cells
incubated with the different long peptides (Table 5). Then the specific
anti-N2 CTL were stimulated a fourth time with the N2 peptide and
tested for their capacities to recognize autologous EBV targets
infected with different recombinant vaccinia viruses (Fig.
4). Anti-N2 CTL obtained from volunteer
V4.5 (QS21) recognized antigen naturally processed by autologous EBV
lymphoblastoid cell lines LCL infected with recombinant vaccinia
viruses carrying HIV nef genes from various HIV clades and
strains. For the same E/T ratio, the HIV-specific CTL recognized
Nef-LAI and Nef-MN (HIV-1 clade B) with the same efficiency. The
percent specific lysis was lower but significant with the Nef-Bangui
(HIV-1 clade A) and Nef-ROD (HIV-2) proteins. Thus, CTL generated by
lipopeptide vaccination recognized, by cross-reaction, recombinant Nef
proteins from different HIV strains. It should be of interest to test
whether different HIV-infected cells can be recognized.

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FIG. 4.
Anti-NEF CTL obtained with PBMC from volunteers V4.5
were tested for their capacities to recognize autologous EBV-infected
targets infected with different recombinant Nef vaccinia viruses. For
the same E/T ratio (16:1), the Nef peptide-specific CTL were tested
against recombinant Nef proteins derived from HIV-1 LAI and MN (clade
B), HIV-1 Bangui (clade A), and HIV-2 ROD.
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HIV-specific ex vivo IFN-
-secreted CD8+ T
cells.
The gamma interferon (IFN-
) ELISPOT assay appeared to be
a very sensitive ex vivo method for quantifying and identifying activated effector CD8+ T cells, which produce lymphokines
with or without lytic activity. We therefore used this method to
identify epitopic CD8+ peptides recognized by the PBMC of volunteers.
Unstimulated thawed PBMC collected before and after vaccination from
volunteers were tested for their ability to secrete IFN-
in response
to HLA class I-restricted viral epitopic peptides, as presented in
Table 6. No response or a weak response
was obtained with PBMC cultured in medium alone, whereas significant
numbers of spots were detected in the presence of PHA (data not shown). Various epitopic CD8+ peptides derived from HIV-1 and
contained in the lipopeptides were incubated with the corresponding HLA
class I haplotype cells identified in each volunteer. PBMC from five of
the six volunteers were able to secrete IFN-
in response to at least
two CD8+ peptides. Interestingly, in volunteer V4.6, two
peptides, Nef 136 to 145 and Nef 190 to 198 (restricted to HLA-A2),
were recognized by ELISPOT assay (Table 6), whereas no CTL activity
against the three Nef long peptides was identified in this volunteer
(Table 4), thus demonstrating the possibility of better characterizing a multiepitopic CD8+-T-cell response by an ELISPOT assay.
On the other hand, we were also able to correlate cytotoxic activity
against Nef 66 to 97 detected in volunteer V4.18 (Table 4) with two
CD8+ epitopes included in this long peptide by an
ELISPOT assay (Nef 73 to 82 and Nef 84 to 92). Further investigation is
in progress to complete this multiepitopic CD8+-T-cell
analysis.
Similarly, by studying non-HIV viral peptides derived from EBV (EBN 416 to 424; HLA-A11 restricted) and influenza virus (M 58 to 66;
HLA-A2-restricted), we observed that PBMC collected from volunteers
before and after vaccination could recognize those peptides with the
appropriate HLA restriction. This indicates that the quality of
effector CD8+ function is similar in the two PBMC samples
taken from the same volunteer.
 |
DISCUSSION |
The peptide-based approach presents several advantages over that
of conventional vaccines (proteins, whole DNA gene, and live recombinant vectors). The immune response can be directed against highly conserved epitopes that might be crucial for pathogens such
as HIV. This approach also provides the ability to elicit CTL responses
directed against subdominant epitopes or to eliminate epitopes
that could induce deleterious immune responses. The immunogenicity of
synthetic peptides is enhanced by adding a lipid tail at one end of the
sequence. Thus, several studies with mice (22, 29), macaques
(24), and humans (20, 33) have shown that
lipopeptides are highly immunogenic, inducing strong B- and T-cell
responses in vivo.
We therefore analyzed B- and T-cell responses induced by vaccination
with HIV lipopeptides in seronegative volunteers who were given three
injections of either 100, 250, or 500 µg of each lipopeptide with or
without an adjuvant (QS21).
Vaccinated subjects induced specific IgG antibodies that recognized the
Nef, Gag, and Env peptides in the vaccine, as well as the corresponding
proteins. The capacity of the vaccine to induce IgG specific to Nef
protein could be significant, since the HIV-1 Nef antigen can be
present on the surface of infected cells, allowing the formation of a
syncytium between an infected and an uninfected cell. This function can
be blocked by anti-Nef immunoglobulin antibodies (10, 25).
The G2 peptide corresponding to residues 253 to 284 of the P25 Gag
protein was extremely immunogenic and was recognized by all vaccinated
subjects. The Gag protein profile (P25, P40, and P55) showed that
immunization induced recognition of both the immature and mature Gag
proteins. Finally, we obtained a specific response to the V3 gp120
consensus peptide in some vaccinated subjects, but none of them
recognized the gp120 Env protein. Moreover, no neutralizing antibodies
were detected in the sera of the 12 subjects after three injections.
Perhaps we needed to administer additional boosts to raise these
neutralizing antibodies, as described in experimental models
(31). Results also showed that antibody responses to the six
long peptides in sera obtained from vaccinated volunteers and from
seropositive patients were different. This point is of particular
importance, since one of the rationales for using peptide immunization
is to target the immune response to domains of proteins that are not
recognized by antibodies raised after immunization or infection with
full-length viral protein. Such regions of proteins might be critical
in protective immunity, since they could be more well conserved or the
target of functional antibodies.
CD4+ T cells are necessary for the induction and
maintenance of the effector functions of CD8+ T cells. In
addition, CD4+ T cells activate professional
antigen-presenting cells, which are thereby rendered highly effective
in stimulating CD8+ T cells (19, 26). We and
others have previously shown that TH1 activity is required for the
induction of specific CD8+ T lymphocytes by lipopeptide
vaccination (23, 30, 33). A recent study in which
humans were immunized with a lipopeptide hepatitis B virus vaccine
showed that the helper T-cell response is important for the development
of CTL responses (20). This lipopeptide contained a
promiscuous human T-helper epitope derived from tetanus
toxoid (TT 830 to 843) and a CTL epitope specific to the hepatitis
B virus (HBV 18 to 27) linked as a single colinear synthesis unit. A
significant helper T-cell response was associated with a sustained CTL
response. We also found that T-helper activity was required for the
induction of specific CD8+ T lymphocytes. The HIV-specific
proliferative CD4+-T-cell response of PBMC from several
vaccinated subjects was associated with the induction of HIV-specific
CTL activity. In contrast, PBMC from a volunteer that did not
proliferate in response to peptide did not contain specific CTL. Our
results also indicated that CD4+ and CD8+
epitopes in the lipopeptide vaccine were not necessarily located in
the same long peptide. It has been shown that poor
CD4+-T-cell responses during HIV infection are correlated
with high viral loads (28). Thus, the strong and
multiepitopic HIV-1 CD4+-T-cell response obtained in our
clinical trial might also have important implications for immunotherapy
and for understanding the role of HIV-specific CD4+ in the
control of infection.
A recent report showed that CTL are essential for controlling HIV
infection (32). HIV type 1-specific CD8+ T cells
are associated with the initial reduction in early viremia during
primary infection, as well as with maintenance of the asymptomatic phase of infection (17). On the other hand, noncytotoxic
CD8+ T cells may also be critical for preventing
progression to disease following HIV infection (8, 21). In
the present study, HIV-specific CTL were obtained after three
injections. Among the sera from the nine positive subjects, four
generated specific CTL to one long peptide and five reacted against two
or three long peptides. To better identify multiepitopic
CD8+-T-cell responses, we have begun to test CTL activity
against the corresponding optimal short peptides spanning the sequence of the long peptides. Moreover, we also showed that HIV-specific CTL
induced by vaccination can recognize naturally processed viral protein.
Thus, CTL induced by vaccination recognized various HIV viruses by
cross-reaction.
We also used an IFN-
ELISPOT assay, which is a very sensitive ex
vivo method, to better characterize and quantify anti-HIV-1 CD8+-T-cell responses induced in vaccinated subjects. We
were thus able to identify the epitopic short peptides recognized by
activated effector CD8+ T cells that produced lymphokines
with or without lytic activity. IFN-
-secreting CD8+ T
cells specific for HIV-1 peptides were detected ex vivo in five of the
six subjects tested at week 20, indicating that effector CD8+ are present at a detectable frequency. The number of
IFN-
CD8+ T cells obtained with short HIV epitopes
is comparable to that obtained with M 58 to 66 peptides derived from
influenza virus-seropositive subjects (18). In
contrast, the number of HIV-specific ex vivo IFN-
-secreting CD8+ T cells obtained from
HIV-seropositive patients could be 5 to 10 times greater
(7). We postulate that the presence of the virus in
HIV-seropositive patients induces permanent stimulation of specific
HIV-IFN-
CD8+ T cells.
In a previous study, lipopeptide vaccine was found to induce a CTL
response in a preclinical SIV-infected macaque model, but this CTL
response was essentially monoepitopic, leading to selection and to the
emergence of virus escape mutants (24). This is in agreement
with the observation of Koening et al., who found that the transfer of
an HIV-1-specific CTL clone to AIDS patients led to the emergence of
HIV variants and subsequent disease progression (16). The
limitation of this approach is that a monospecific CTL response would
lead to vaccine failure. Thus, the polyepitopic response we obtained
with the Nef, Gag, and Env proteins is of particular interest, because
our vaccine elicits a polyclonal CTL response.
Table 7 summarizes the immune responses
obtained in the vaccinated subjects. The various doses of the
lipopeptides were well tolerated by the vaccinated subjects. The lowest
dose of lipopeptide (100 µg) induced an immune response in volunteer
V4.5 (QS21). After vaccination, CTL induction was associated with
T-helper activity. There was also induction of helper activity without CTL induction in some vaccinated subjects (V4.23 and V4.32). The antibody responses to the long peptides (contained in the vaccine) were
also associated with the CD4+-T-cell responses, except in
one subject (V4.17). The recognition of the Nef and Gag proteins was
correlated with the presence of antibodies specific to the long
peptides. Humoral and cellular immune responses were induced in
volunteers immunized with or without QS21 adjuvant. The only
adjuvant effect obtained was in the intensity of the response to the
HIV-1 proteins. There was a multispecific immune response (antibodies
and CD4+ and CD8+ T cells) in most of the
vaccinated subjects. The G2 long peptide appeared to be the most
immunogenic peptide with respect to both humoral and cellular
reactivities elicited. Therefore, we believe that development of an
anti-HIV lipopeptide vaccine is a suitable method to induce B- and
T-cell multiepitopic responses in humans.
View this table:
[in this window]
[in a new window]
|
TABLE 7.
Summary table comparing antibody, proliferative, and CTL
induction for each individual lipopeptide in volunteers immunized
at week 20 with or without adjuvant
|
|
In conclusion, it has recently been shown in experiments with macaques
that a strong TH1 response is required for induction of a multiepitopic
CTL response after lipopeptide vaccination (23). To improve
CD8+-T-cell responses obtained by lipopeptide vaccination,
a new formulation will be tested, in which long HIV-1 peptides will be
mixed with a lipopeptide containing a promiscuous human T-helper
epitope derived from tetanus toxoid. Lipopeptides can also be used
as a prime boost after immunization, using recombinant poxvirus
containing a complex combination of HIV genes. This strategy could
avoid the induction of an immune response to the vector.
 |
ACKNOWLEDGMENTS |
We are very grateful to Marylène Garcette, Jessintha
Gaston, and Céline Igéa for excellent technical assistance.
We also thank the volunteers for their cooperation and the ANRS for
continuous support and assistance in the recruitment and selection of
volunteers. We acknowledge Marie-Pierre Treilhou, Sandra Fournier,
Naïma Kerbouche, and Vincent Feuillie of the Pasteur Hospital
vaccine trial center. The English text was edited by Noah Hardy.
This study was supported by grants from the Institut National de la
Santé et la Recherche Médical (INSERM), ANRS. H. Gahéry-Ségard is supported by a fellowship from ANRS.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Laboratoire
d'Immunologie des Pathologies Infectieuses et Tumorales, INSERM
Unité 445, Institut Cochin de Génétique
Moléculaire, Hôpital Cochin, 27, rue du faubourg
Saint-Jacques, 75014 Paris, France. Phone: 33 (0)1 46 33 43 95. Fax: 33 (0)1 44 07 14 25. E-mail:
gahery{at}icgm.cochin.inserm.fr.
 |
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Journal of Virology, February 2000, p. 1694-1703, Vol. 74, No. 4
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