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Journal of Virology, November 2000, p. 10650-10657, Vol. 74, No. 22
0022-538X/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Functional Role of Residues Corresponding to Helical Domain II
(Amino Acids 35 to 46) of Human Immunodeficiency Virus Type 1 Vpr
Satya P.
Singh,1
Brian
Tomkowicz,1
Derhsing
Lai,1
Maria
Cartas,1
Sundarasamy
Mahalingam,1,
Vaniambadi S.
Kalyanaraman,2
Ramachandran
Murali,3 and
Alagarsamy
Srinivasan1,*
Department of Microbiology and Immunology,
Kimmel Cancer Institute, Thomas Jefferson University, Philadelphia,
Pennsylvania 191071; Advanced Bioscience
Laboratories, Inc., Kensington, Maryland 208952;
and Department of Pathology and Laboratory Medicine,
University of Pennsylvania, Philadelphia, Pennsylvania
191043
Received 22 June 2000/Accepted 19 August 2000
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ABSTRACT |
Vpr, encoded by the human immunodeficiency virus type 1 genome,
contains 96 amino acids and is a multifunctional
protein with features which include cell cycle arrest at
G2, nuclear localization, participation in transport of the
preintegration complex, cation channel activity, oligomerization, and
interaction with cellular proteins, in addition to its incorporation
into the virus particles. Recently, structural studies based on nuclear
magnetic resonance and circular dichroism spectroscopy showed that Vpr
contains a helix (HI)-turn-helix (HII) core at the amino terminus and
an amphipathic helix (HIII) in the middle region. Though the importance of helical domains HI and HIII has been defined with respect to Vpr
functions, the role of helical domain HII is not known. To address this
issue, we constructed a series of mutants in which the HII domain was
altered by deletion, insertion, and/or substitution mutagenesis. To
enable the detection of Vpr, the sequence corresponding to the Flag
epitope (DYKDDDDK) was added, in frame, to the Vpr coding sequences.
Mutants, expressed through the in vitro transcription/translation system and in cells, showed an altered migration corresponding to
deletions in Vpr. Substitution mutational analysis of residues in HII
showed reduced stability for VprW38S-FL, VprL42G-FL, and VprH45W-FL. An
assay involving cotransfection of NL
Vpr proviral DNA and a Vpr
expression plasmid was employed to analyze the virion incorporation
property of Vpr. Mutant Vpr containing deletions and specific
substitutions (VprW38S-FL, VprL39G-FL, VprL42G-FL, VprG43P-FL, and
VprI46G-FL) exhibited a negative virion incorporation phenotype.
Further, mutant Vpr-FL containing deletions also failed to associate
with wild-type Vpr, indicating a possible defect in the oligomerization
feature of Vpr. Subcellular localization studies indicated that mutants
Vpr
35-50-H-FL, VprR36W-FL, VprL39G-FL, and VprI46G-FL exhibited both
cytoplasmic and nuclear localization, unlike other mutants and
control Vpr-FL. While wild-type Vpr registered cell cycle
arrest at G2, mutant Vpr showed an intermediary effect with
the exception of Vpr
35-50 and Vpr
35-50-H. These results suggest
that residues in the HII domain are essential for Vpr functions.
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INTRODUCTION |
Members of the lentivirus family of
retroviruses have been shown to contain nonstructural proteins of viral
origin in addition to the structural proteins in the virus particles, a
feature noted with several DNA viruses (10, 15, 21, 27).
Specifically, the virus particles produced by human immunodeficiency
virus type 1 (HIV-1) have been shown to contain three nonstructural
proteins, designated Vif, Vpr, and Nef (6, 10, 54). A recent
study, however, has questioned the specific incorporation of Vif into the virus particles (11). The virion-associated protein Vpr has been an area of intensive research with respect to understanding Vpr's role in virus infection and a potential carrier molecule to
transport peptides and proteins to the assembling and mature virus
particles (10, 13, 17, 22, 27, 38, 41, 44, 47, 55, 56). In
addition to its ability to incorporate into virus particles (9,
10, 20, 21, 35, 45, 50), induction of apoptosis (1, 2)
and differentiation (26), cell cycle arrest at
G2 stage (18, 30, 41, 43), nuclear localization (12, 13, 16, 28, 34, 37, 57, 58), transport of the
preintegration complex to the nucleus (19, 37),
transcriptional activation (8), cation-selective channel
activity (40), and interaction with several candidate
cellular proteins (4, 5, 14, 16, 18, 42, 49, 50, 52, 58) are
some of the features of Vpr. With regard to the number of molecules of
Vpr present in the virus particles, it was reported earlier that Vpr is
present in amounts similar to that of Gag (7) or reverse transcriptase (22). Utilizing an epitope-tagging approach,
our laboratory showed that Vpr is present in small amounts (14 to 18 molecules per virion) in the virus particles (48). Further, it was also shown that the extent of incorporation of Vpr into the
virus particles can be influenced by the expression level of Vpr in
cells (24).
Despite several studies, a correlation between the structure-function
relationship of Vpr at the molecular level remains to be defined.
Mutational analysis of Vpr, based on the secondary structure predicted
by several algorithms, identified potential helical domains comprising
residues 17 to 34 and 53 to 72 which are required for virion
incorporation, nuclear localization, stability, and oligomerization
(12, 31-35, 37, 57). Though the carboxyl-terminal region of
Vpr did not have a predicted structure (residues 79 to 96), this region
plays a crucial role in the cell cycle arrest function and also
contributes to the stability of Vpr (10, 13). The predicted
secondary structure of Vpr was also supported by circular dichroism
spectroscopy studies of generated peptides corresponding to the helical
domains (29). Studies by Roques and coworkers recently have
provided information regarding the structure of Vpr utilizing nuclear
magnetic resonance (NMR) (45, 53). It was shown that the Vpr
molecule contains three helical domains, HI, HII, and HIII, involving
residues 17 to 29, 35 to 46, and 53 to 78, respectively.
To address the role of helical domain HII, corresponding to the
residues 35 to 46, on Vpr functions, a strategy involving deletion,
insertion, and/or substitution mutagenesis was utilized. The data
generated in this study indicate that HII is essential for the
incorporation of Vpr into the virus particles. Further, Vpr harboring
mutations in this domain failed to associate with wild-type Vpr,
suggesting a role in the oligomerization function of Vpr.
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MATERIALS AND METHODS |
Cell lines.
RD, a human rhabdomyosarcoma cell line, and
HeLa, a human cervix epithelioid carcinoma cell line, were obtained
from the American Type Culture Collection (Manassas, Va.). Cells were
maintained in Dulbecco's modified Eagle's medium (GIBCO BRL
Laboratories, Grand Island, N.Y.) supplemented with 1%
L-glutamine, penicillin-streptomycin, and 10% fetal bovine
serum at 37°C in 5% CO2.
Construction of recombinant plasmids containing variant Vpr.
Vpr coding sequences, amplified through PCR using proviral NL4-3 DNA as
a template, were cloned into the expression vector pCDNA3 (Invitrogen,
Carlsbad, Calif.). The deletion, insertion, and substitution of amino
acid residues in the HII domain of Vpr were carried out by using PCR
methodologies (31, 47). The details of the primers used for
the generation of deletion and substitution mutants are available upon
request. Sequences corresponding to the Flag epitope (DYKDDDDK) were
added to the 3' end of the Vpr coding sequence to enable the detection
of Vpr (46). Chimeric enhanced green fluorescent protein
(EGFP)-Vpr expression plasmids were generated by fusing EGFP coding
sequences at the 5' end of the Vpr coding sequence. The integrity of
plasmid DNAs was tested by application of a restriction enzyme followed
by DNA sequence analysis.
In vitro transcription/translation and RIPA of Vpr.
The
coupled T7 transcription/translation system (Promega, Madison, Wis.)
was used for assessing the expression of the protein directed by the
Vpr clones. Incubation conditions were monitored according to the
manufacturer's instructions. Radioimmunoprecipitation analysis (RIPA)
of in vitro-translated proteins was carried out using polyclonal
antiserum to the Flag epitope (Santa Cruz Biotechnology, Santa Cruz,
Calif.) as described previously (47).
Expression of Vpr in cells.
HeLa cells (106) in
35-mm-diameter petri dishes were infected with recombinant vaccinia
virus vTF7-3 expressing T7 RNA polymerase at a multiplicity of
infection of 10 for 1 h. At the end of incubation, the virus
inoculum was removed and the cells were washed with phosphate-buffered
saline (PBS). Vpr expression plasmids were transfected into cells using
FuGENE 6 transfection reagent (Roche, Indianapolis, Ind.). Forty-eight
hours after transfection the cells were washed with PBS and lysed in
RIPA buffer (50 mM Tris-HCl [pH 7.6], 150 mM NaCl, 0.5% Triton
X-100, 0.5% deoxycholic acid, 0.1% sodium dodecyl sulfate, 1 mM
phenylmethylsulfonyl fluoride). Cell lysate was centrifuged to remove
the cell debris. Estimation of the protein content of the cell lysate
was carried out using Bradford reagent (Bio-Rad, Richmond, Calif.), and
150 µg equivalent of cellular proteins was subjected to immunoblot analysis.
Immunofluorescence assay.
HeLa cells seeded onto
poly-L-lysine-coated coverslips in a 35-mm-diameter petri
dish were infected with vaccinia virus vTF7-3 and were transfected with
Vpr expression plasmid DNA as described above. Twenty-four hours after
transfection, the cells were washed with PBS and fixed in 4%
paraformaldehyde at room temperature for 30 min. After being washed
three times with PBS, the cells were incubated with anti-Flag M2
monoclonal antibody-fluorescein isothiocyanate (FITC) conjugate (Sigma,
St. Louis, Mo.) at 37°C in a humidified incubator for 90 min.
Following several washes with PBS, the cells were incubated with
4,6-diamidino-2-phenylindole (DAPI) (0.1 µg/ml) to counterstain the
nuclei, washed three times with PBS, and mounted on glass slides using
a Slow Fade antifade reagent (Molecular Probes, Eugene, Oreg.).
Immunofluorescence was detected using a Zeiss Axiovert 100 inverted
fluorescence microscope with an attached Bio-Rad MRC 600 laser scanning
confocal imaging system. To produce a merged image, each fluorochrome
was recorded and the superimposed images were generated with Image-Pro software (Media Cybernetics, Silver Spring, Md.).
Cell cycle studies.
To assess the effect of mutant Vpr on
the cell cycle, we utilized a chimeric protein approach in which EGFP
was fused to the amino terminus of Vpr. HeLa cells were transfected
with EGFP-Vpr-encoding plasmids by the calcium phosphate precipitation
method (48). At 48 h posttransfection, the cells were
washed with PBS, trypsinized, diluted with PBS, and pelleted. The cells
were resuspended in PBS and were gated on the fluorescence-activated
cell sorter (FACScan; Coulter Apex Elite, Hialeah, Fla.) for both the
EGFP-positive and -negative populations. The EGFP-positive and
-negative cells were pelleted and resuspended in 80% ice-cold ethanol
for 30 min. Following an additional wash with PBS, the cells were
incubated in PBS containing RNase A (50 µg/ml) and propidium iodide
(40 µg/ml) for 60 min at 4°C. The cellular DNA content was analyzed with a FACScan apparatus. The DNA profile was analyzed by the Multicycle AV program (Phoenix Flow System, San Diego, Calif.).
Transfection and generation of virus particles.
HIV-1
proviral DNA (pNL4-3) was modified to disrupt the expression of Vpr by
an insertion (AATT) between residues 63 and 64 within the Vpr coding
region (NL
Vpr). To generate virus particles containing wild-type or
mutant Vpr, NL
Vpr proviral DNA was cotransfected with the respective
Vpr expression plasmid by calcium phosphate coprecipitation method into
RD cells (47). Similarly, cotransfection of NL4-3,
containing an intact open reading frame for Vpr, with Vpr expression
plasmids was carried out to generate virus particles for assessing the
association of mutant Vpr with wild-type Vpr. The virus particles
released into the culture supernatant were collected 120 h after
transfection. The culture supernatants were precleared for 10 min at
10,000 rpm and subsequently spun at 40,000 rpm for 3 h using
sucrose density gradient centrifugation. Virus pellets were lysed in
lysis buffer (62.5 mM Tris-HCl [pH 6.8], 0.2% sodium dodecyl
sulfate, 1%
-mercaptoethanol, 10% glycerol), and a p24 antigen
assay was used to quantitate the amount of protein present in the virus particles.
Immunoblot analysis.
Virus samples, normalized on the basis
of p24 antigen values obtained using an enzyme-linked immunosorbent
assay (Organon Teknika, Durham, N.C.) were immunoprecipitated with
polyclonal antiserum to Flag epitope (Santa Cruz Biotechnology) and
protein A-Sepharose CL-4B (Amersham Pharmacia Biotech, Piscataway,
N.J.) at 4°C overnight. The Sepharose beads were then washed and
boiled in sample buffer for 5 min, and immunoprecipitated proteins were separated on NuPAGE 10%
N,N-methylenebisacrylamide-Tris gel followed by
transfer onto a nitrocellulose membrane. Membranes were blocked with
5% nonfat dry milk and incubated with rabbit polyclonal antiserum to
Flag epitope for 2 h. The membranes were washed three times for 10 min each with TBST (20 mM Tris [pH 7.5], 500 mM NaCl, 0.05% Tween-20) and then probed with secondary antibody (anti-rabbit immunoglobulin AP conjugate; Promega), washed again with TBST, and
developed with CDP-Star as the chemiluminescent substrate (Promega).
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RESULTS |
Structural features and generation of mutant Vpr.
The
predicted secondary structure as indicated by several algorithms
combined with site-specific mutagenesis studies showed that Vpr
contains helical domains with a basic amino acid enriched C terminus
(12, 31-35, 37, 57). Recently, Wecker and Roques (53) reported the structure of Vpr utilizing NMR
spectroscopy (Fig. 1). The amino-terminal
segment of Vpr comprising amino acids 1 to 51 has been shown to have
three turns around the first three proline residues P5, P10, and P14.
This is followed by a long helix-turn-helix motif encompassing residues
17 to 46 with another turn extending from residues 47 to 49. The
helix-turn-helix motif corresponds to residues 17 to 29 (helical
domain; HI), 30 to 34 (
-turn type IV), and 35 to 46 (helical domain;
HII). HII is less amphipathic than HI. The studies involving the
C-terminal fragment of Vpr corresponding to residues 52 to 96 showed a
long amphipathic helix (residues 53 to 78; HIII) followed by a
less-defined domain extending from residues 79 to 96.

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FIG. 1.
Schematic representation of wild-type and mutant Vpr.
The sequences corresponding to the Flag epitope were added to the 3'
end of the Vpr coding sequence. (A) The residues deleted from the HII
domain and the adjoining region and the designations of mutants are
indicated. (B) Substitutional mutational analysis of residues in the
HII domain.
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With respect to the structure-function relationship of Vpr, molecular
analyses involving site-specific mutagenesis have provided useful
information (12, 31-35, 57). However, there is no
information available regarding the role of residues present in the HII
domain of Vpr. To evaluate the role of the residues in this domain, we have considered an approach involving a combination of deletion and
site-specific mutagenesis. PCR-based methods were used to generate Vpr
mutants lacking 1, 5, 9, and 14 residues in the HII domain and the
adjoining region (Fig. 1A). In addition, a variant containing a hinge
region (GGSSG) in place of the deleted residues in the HII domain was
also generated. Further, to enable the detection of Vpr, sequences
corresponding to the Flag epitope were fused in frame to the 3' end of
the Vpr coding sequence. Substitution Vpr mutants (Fig. 1B) were also
generated utilizing similar methods.
Effect of mutations in helical domain II on Vpr expression.
As
the Vpr expression plasmid contains the T7 promoter upstream of
the coding sequences, the protein directed by each plasmid was tested
using an in vitro transcription-coupled translation system (TNT;
Promega). In vitro-translated proteins were immunoprecipitated with
polyclonal Flag antiserum. The mutant Vpr protein was detected at
the same level as the wild-type Vpr-FL protein (data not shown). As
expected, the deletion of various numbers of amino acid residues (1 to 14) resulted in mutant proteins with mobilities different from that
of the wild-type Vpr-FL. We also utilized recombinant vaccinia virus
vTF7-3 expressing T7 polymerase to study the effect of mutations in the
HII domain on the expression of Vpr in cells. vTF7-3-infected HeLa
cells were transfected with wild-type or mutant Vpr expression plasmids
by FuGENE 6 transfection reagent. Cell lysates, prepared 48 h
after transfection, were subjected to immunoblot analysis using Flag
antibodies. Transfection with each of the deletion mutants resulted in
detectable levels of Vpr-FL in cell lysate (Fig.
2A). The electrophoretic mobilities of
the mutant Vpr proteins were similar to those in the data for the
corresponding proteins translated in vitro. Analysis of substitution mutants indicated that the protein directed by VprW38S-FL was highly
unstable (Fig. 2B). In addition, mutants VprW38A-FL, VprL39G-FL, VprL42G-FL, and VprI46G-FL showed an altered stability in comparison to
Vpr-FL.

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FIG. 2.
Expression of wild-type and mutant Vpr. (A) Immunoblot
analysis of Vpr in cells. HeLa cells were infected with vaccinia virus
vTF7-3 and transfected with wild-type and mutant Vpr expression
plasmids. Cell lysates were processed for immunoblot analysis as
described in Materials and Methods. M, molecular mass markers (in
kilodaltons). Lanes: 1, pCDNA3; 2, Vpr-FL; 3, Vpr 44-FL; 4, Vpr 42-46-FL; 5, Vpr 40-48-FL; 6, Vpr 37-50-FL; 7, Vpr 37-50-H-FL. Arrow, position of proteins. (B) Expression of Vpr
harboring substitutions in HII domain in HeLa cells.
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Incorporation of mutant Vpr into virus particles.
To address
the role of the HII domain in the virion incorporation property of Vpr,
we employed an assay system involving the cotransfection of HIV-1
proviral DNA containing a frameshift mutation in Vpr coding sequences
(NL
Vpr) and the Vpr expression plasmid into cells to generate virus
particles. The rationale for the assay is that Vpr, expressed in
trans, will be incorporated into the virus particles
directed by HIV-1 proviral DNA. The virus particles released into the
culture medium were centrifuged and quantitated by a p24 antigen assay.
The virus particles were normalized on the basis of p24 antigen values
and subjected to immunoblot analysis to monitor the extent of
incorporation of mutant Vpr into virus particles. The results
showed that virion incorporation of Vpr deletion mutants is
completely abolished (Fig. 3A). On the
other hand, VprR36W-FL, VprI37G-FL, VprW38A-FL, VprH40W-FL, VprG43A-FL, and VprH45W-FL showed a positive virion incorporation phenotype. Interestingly, VprW38S-FL, VprL39G-FL, VprL42G-FL, VprG43P-FL, and VprI46G-FL exhibited a reduction in virion
incorporation in comparison to Vpr-FL (Fig. 3B).

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FIG. 3.
Immunoblot analysis of virus particles using antibodies
against Flag epitope. Viral lysates normalized on the basis of p24
antigen values were subjected to analysis following separation on
Nu-PAGE 10% N,N-methylenebisacrylamide-Tris gel
and transfer to nitrocellulose membrane. (A) Virus particles generated
through cotransfection of NL Vpr and Vpr-FL and mutant Vpr-FL
expression plasmids. M, molecular mass markers (in kilodaltons).
Lanes: 1, NL Vpr; 2, NL Vpr + Vpr-FL; 3, NL Vpr + Vpr 44-FL; 4, NL Vpr + Vpr 42-46-FL; 5, NL Vpr + Vpr 40-48-FL; 6, NL Vpr + Vpr 37-50-FL; 7, NL Vpr + Vpr 37-50-H-FL. (B) Virion incorporation phenotypes of Vpr
substitution mutants.
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It was earlier reported (59) that the oligomerization
property of Vpr may involve HI and downstream residues. This implies that residues in the HII domain may contribute to the
dimerization/oligomerization feature of Vpr. To address this, we
utilized an assay system in which the association of Vpr-FL mutants
with wild-type Vpr was measured. This is an indirect assay for
monitoring the oligomerization capabilities of Vpr in cells. Vpr
mutants that lack or exhibit a low level of virion incorporation are
ideal candidates for this assay. For this purpose, HIV-1 proviral DNA
NL4-3 was cotransfected with either a Vpr-FL- or Vpr-FL-encoding mutant
plasmid. Since the Flag epitope is present only in Vpr directed by the
expression plasmid and is absent in the Vpr directed by the proviral
DNA, the detection of Flag epitope-containing Vpr in the virus
particles would indicate that Vpr-FL or a Vpr-FL mutant is incorporated into the virus particles by itself and/or in association with wild-type
Vpr. The immunoblot analysis of virus particles generated by
cotransfection of NL4-3 and Vpr-FL showed that a protein with a
molecular mass of 14 kDa was detectable with Flag antibodies. On the
other hand, a Vpr-FL mutant was not detectable in the virus particles,
indicating that Vpr mutants failed to associate with wild-type Vpr
(Fig. 4A). Since the number of molecules
of Vpr present in the virus particles is low (14 to 18 molecules per virion), it is likely that overexpression of mutant Vpr through a
heterologous promoter may mask the wild-type Vpr incorporation expressed through HIV-1 proviral DNA. This may result in the absence of
mutant Vpr-FL in the virus particles. Considering this, we also
utilized a cotransfection approach in which HIV-1 proviral DNA lacking
Vpr expression (NL
Vpr) and wild-type and mutant Vpr expression
plasmids were transfected into cells. This was based on our earlier
work showing that the expression of Vpr in trans leads to
efficient incorporation into virus particles (392 to 550 Vpr molecules
per virion). Hence, the expression of wild-type Vpr and mutant
Vpr-FL in trans may provide an opportunity to detect mutant
Vpr-FL in the virus particles through its association with wild-type
Vpr. The immunoblot analysis of virus particles derived from cells
cotransfected with Vpr-FL detected a band reactive to Flag
antisera. However, virus particles derived from cotransfection of
NL
Vpr, wild-type Vpr, and mutant Vpr-FL containing deletions did not
show a band (Fig. 4B). These results suggest that mutant Vpr-FL
molecules containing deletions are defective for oligomerization of
Vpr. The possibility that a transdominant effect by mutant Vpr-FL on
wild-type Vpr could also result in the failure to detect mutant
Vpr-FL in the virus particles existed. To investigate this, virus
particles derived from cotransfection were analyzed using antibodies
against Vpr. Such an analysis showed similar levels of Vpr except where
NL
Vpr was cotransfected with the pCDNA3 vector control
(data not shown), ruling out an effect on virion incorporation of
wild-type Vpr.

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FIG. 4.
Dimerization or oligomerization of Vpr in cells. (A)
Extent of incorporation of mutant Vpr-FL and wild-type Vpr-FL into the
virus particles directed by NL4-3 proviral DNA. Vpr was expressed in
the context of HIV-1 proviral DNA. (B) Incorporation of mutant Vpr-FL
in association with wild-type Vpr. Vpr was expressed through a
heterologous promoter.
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Subcellular localization of Vpr.
It is likely that the lack of
incorporation of Vpr mutant into the virus particles may result from
altered subcellular localization of the mutant protein in cells. In
order to verify this, we used Vpr constructs containing the Flag
epitope. Transfected HeLa cells were incubated with anti-Flag M2
monoclonal antibody-FITC conjugate followed by incubation with DAPI to
stain the nucleus. As a control, we used cells transfected with the
backbone pCDNA3 plasmid. As noted earlier, Vpr expressed in cells was
localized to the nuclear region (Fig.
5). The observed patterns include an
intense signal at the rim of the nucleus and diffuse and focal staining
in the nucleus. The specificity was demonstrated by the absence of
staining in the cells transfected with pCDNA3 and mock-transfected
cells (data not shown). All Vpr mutants, except Vpr
37-50-H-FL,
showed a localization pattern similar to that of Vpr-FL. Vpr directed by the mutant Vpr
37-50-H-FL showed an intense signal at
the rim of the nucleus, and a considerable amount of protein
was also present in the cytoplasm (Fig. 5). The substitution mutants
designated VprR36W-FL, VprL39G-FL, and VprI46G-FL showed both
nuclear and cytoplasmic localization, unlike the other substitution
mutants, which localized in the nucleus (Table
1).

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FIG. 5.
Subcellular localization of wild-type and
mutant Vpr. HeLa cells 24 h after transfection were fixed and
stained with anti-Flag M2 monoclonal antibody-FITC conjugate followed
by DAPI. Cells were analyzed using a confocal microscope at ×60
magnification. To produce a merged image, each fluorochrome was
recorded and the superimposed images were generated with Image-Pro
software. (A) Anti-Flag M2-FITC conjugate; (B) DAPI; (C) superimposed
images.
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Effect of mutations in helical domain II on cell cycle functions of
Vpr.
It was reported earlier that Vpr induces an arrest of cells
at G2 phase of the cell cycle (18, 30, 41, 43).
Though the C terminus of Vpr containing basic amino acids has
been implicated in the cell cycle arrest function
(12), mutations in the amino terminus have also been shown
to have an effect in this regard. This has prompted us to evaluate the
effect of mutation in the HII domain on cell cycle arrest. As the
addition of residues at the C terminus of Vpr may result in loss of the
cell cycle arrest function (12), we have utilized a
chimeric Vpr without Flag epitope at the C terminus. To visualize the
cells for expression and cell cycle arrest, the EGFP coding
region was fused to the 5' end of the Vpr coding region. Cells
transfected with EGFP- and EGFP-Vpr-encoding plasmids were sorted
initially based on EGFP expression. The EGFP-positive and -negative
cells were fixed, stained with propidium iodide, and analyzed by flow
cytometry. Mock- and EGFP-transfected cells showed
G2/G1 ratios of 0.17 and 0.15, respectively
(Fig. 6). Cells expressing EGFP-Vpr
registered cell cycle arrest with a G2/G1 ratio
of 1.82. EGFP-Vpr
44, EGFP-Vpr
42-46, and EGFP-Vpr
40-48 mutants
showed an intermediary level of cell cycle arrest with
G2/G1 ratios of 0.63, 0.58, and 0.58, respectively. On the other hand, EGFP-Vpr
37-50 and
EGFP-Vpr
37-50-H mutants exhibited loss of cell cycle arrest function
as the G2/G1 ratios are close to the values
obtained with the negative control. All the EGFP-negative cells showed
nearly identical DNA profiles, similar to that of the control (data
not shown).

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FIG. 6.
Effect of wild-type and mutant Vpr on the cell cycle.
HeLa cells were transfected with EGFP and EGFP-Vpr expression plasmids.
At 48 h posttransfection, cells were sorted for EGFP-positive and
-negative populations. The cells were stained for DNA content with
propidium iodide and analyzed by flow cytometry. The
G2/G1 ratio, as determined by the Multicycle AV
program, of each cell population is indicated.
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DISCUSSION |
Vpr is a protein expressed late in HIV-1-infected cells (10,
27). Since its identification, there has been an enormous interest in understanding the functions of this protein. The
demonstration that a related protein, Vpx, is present in HIV-2 and
simian immunodeficiency virus virions in amounts equal to that of Gag
(20) has suggested that the virion-associated proteins may
have a role in the events related to virus infection analogous to the
nonstructural proteins present in the virus particles directed by DNA
viruses (15). The observations in support of such a role for
Vpr include a positive effect on infection of macrophages by HIV-1, its
role in the transport of the viral preintegration complex to the
nucleus, and an effect at the level of transcription (10,
27). Furthermore, it has been shown that Vpr induces cell cycle
arrest at the G2 phase depending on the cell type
(13) and is cytotoxic to cells through the induction of
apoptosis (1, 2). With regard to the amount of Vpr, recent
studies from our laboratory showed that HIV-1 Vpr is present in small
amounts (14 to 18 molecules per virion) in the virus particles
(48), contrary to the data reported earlier (7,
22).
In an effort to gain information about the structure-function
relationship of Vpr, we have utilized the structural data that were
recently reported for Vpr by Roques and coworkers (45, 53).
NMR studies of the synthetic N- and C-terminal peptides comprising
residues 1 to 51 and 52 to 96 of Vpr revealed a structure with three
helical domains. Residues 17 to 29, 35 to 46, and 53 to 78 correspond
to HI, HII, and HIII domains, respectively. Both HI and HIII domains
have also been predicted by several algorithms, and mutational analyses
have been carried out to determine the role of these domains in Vpr
functions (32, 56, 57). In comparison to HI and HIII, the
HII domain was unknown till the structural data came about, and hence
there is no information available regarding the role of the HII domain
in Vpr functions. The HII domain consists of 12 amino acids. The
residues with hydrophilic properties, R36, N41, and Q44, are located on
one side of the helix. The hydrophobic amino acids W38, L39, L42, H45,
and I46 are located on the other side of the helix (53). The
location of residues I37 and H40 on the former side hinders the
formation of a perfect amphipathic helix (53). We have
constructed several Vpr mutants involving deletion, insertion, and
substitution mutagenesis approaches to understand the contribution of
the HII domain to Vpr functions. The rationale for this approach is
that the HII domain may be critical for maintaining the biological
properties of Vpr. On the basis of this assumption, it is hypothesized
that a Vpr mutant with an altered HII may not behave like a wild-type Vpr. It is likely that HII may be involved in stabilizing interactions between the HI and HIII domains or contribute to binding to Gag for its
incorporation into the virus particles. The parameters that were
used for assessing the effect of the mutations in the HII domain
of Vpr include protein expression, stability, virion incorporation,
subcellular localization, and cell cycle arrest. The results presented
here indicate that the HII domain is critical for the Vpr functions.
While the expression and stability of wild-type Vpr and mutants except
VprW38S-FL, VprL42G-FL, and VprH45W-FL remain the same in
transfected cells, the alterations in the HII domain exerted a drastic
effect on the incorporation of Vpr into the virus particles. Vpr
harboring mutations in the HII domain failed to get incorporated into
the virus particles. A deletion of even one residue at the C terminus
of the HII domain (Q44) abolished virion incorporation, similar to what
was found for other deletion mutants. The deletion in Vpr
42-46-FL is
confined to the HII domain comprising four residues. On the other hand, mutants Vpr
40-48-FL, Vpr
37-50-FL, and Vpr
37-50-H-FL involved deletion of residues in HII and also adjoining residues 47 to 50, which
have been shown to form a
turn. The substitution mutational analysis provided evidence supporting a crucial role for the
hydrophobic residues in the virion incorporation function.
Specifically, substitutions targeting W38, L39, L42, and I46 resulted
in a drastic reduction in the virion incorporation of Vpr with the
exception of H45. Similar studies involving the residues located on the
side of the helix opposite to the hydrophobic residues (R36, I37, H40, and N41) showed that substitution did not abrogate the virion incorporation function.
In addition to lack of virion incorporation, mutant Vpr also failed to
associate with wild-type Vpr. This was arrived at by using an indirect
assay in which virus particles were generated through cotransfection of
either HIV-1 proviral DNA NL4-3 or NL
Vpr and Vpr expression
plasmids. The presence of a Flag epitope in the mutant Vpr and its
absence from Vpr encoded by NL4-3 provide the premise for analyzing
mutant Vpr in the virus particles using Flag antibodies. As the mutant
Vpr-FL exhibits a negative virion incorporation phenotype, the
association of mutant Vpr-FL with Vpr is the only mechanism by which
mutant Vpr-FL will be incorporated into the virus particles. Since
wild-type Vpr was shown to be present in the virus particles derived
from cotransfection by using antibodies against Vpr, it is reasonable
to suggest that the absence of mutant Vpr-FL may be due to a defect at
the level of dimerization or oligomerization. Recently, Schuler et al.
(45) reported that a synthetic peptide corresponding to the
C terminus of Vpr (residues 52 to 96) exhibited the dimerization
property. However, Vpr mutants used in this study which have mutations
only in HII with an intact C terminus failed to associate with
wild-type Vpr. This indicates that the observation noted with the
synthetic peptide (residues 52 to 96) is not applicable to full-length
Vpr. The lack of incorporation of the Vpr HII domain mutant into the virus particles could result from the lack of the protein available in
a sufficient amount. However, this does not seem to be the case, as
equal amounts of wild-type and mutant Vpr are shown to be present in
cells. Alternatively, the residues present in the HII domain may play a
crucial role in terms of facilitating the interactions between Vpr and
Gag (25, 44). Such a view is indeed supported by our
studies, as the substitution of hydrophobic residues W38, L39, L42, and
I46 resulted in a drastic reduction in the incorporation of Vpr into
the virus particles. The failure to incorporate into virus particles
could be due to a result of the altered subcellular localization of
mutant Vpr proteins. This possibility was tested by analyzing the
cellular localization of mutant Vpr in comparison to wild-type Vpr. The
studies in this regard showed that most of the mutant Vprs and
wild-type Vpr-FL exhibited perinuclear and diffuse staining of
the nucleus. On the other hand, cells transfected with
Vpr
37-50-H-FL, VprR36W-FL, VprL39G-FL, and VprI46G-FL
indicated a staining pattern involving both the rim of the nucleus
and cytoplasm. As cell cycle arrest is a characteristic feature
of Vpr in HIV-1-infected and Vpr expression plasmid-transfected cells,
Vpr mutants harboring deletions were evaluated for this function.
Though the cell cycle arrest property has been attributed to the C
terminus of Vpr, mutation at the amino terminus of Vpr has an effect on
the cell cycle (12). While wild-type Vpr exhibited a typical
cell cycle arrest at G2, several mutants showed an
intermediary level of cell cycle arrest. Vpr
37-50 and Vpr
37-50-H
did not have any effect on the cell cycle. Overall, the experimental
data described in this study point out that the hydrophobic residues of
the HII domain are essential for Vpr functions.
 |
ACKNOWLEDGMENTS |
We express our thanks to Sashi Reddy for his help in the
preparation of the manuscript. Kimmel Cancer Center Confocal
Microscopy, Flow Cytometry, and Nucleic Acid core facilities provided
services for the studies.
This work was supported by funds from the National Institutes of Health
(AI29306) and a grant from the Commonwealth of Pennsylvania to the
Biotechnology Foundation, Inc.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Microbiology and Immunology, Thomas Jefferson University, 1020 Locust St., JAH Rm. 461, Philadelphia, PA 19107. Phone: (215) 503-4724. Fax:
(215) 923-7144. E-mail:
asrinivasan{at}reddi1.uns.tju.edu.
Present address: Centre for DNA Fingerprinting and Diagnostics,
Hyderabad 500076, India.
 |
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