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Journal of Virology, September 2000, p. 7842-7850, Vol. 74, No. 17
0022-538X/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
E2F Proteins Are Posttranslationally Modified
Concomitantly with a Reduction in Nuclear Binding Activity in Cells
Infected with Herpes Simplex Virus 1
Sunil J.
Advani,1,2
Ralph R.
Weichselbaum,2 and
Bernard
Roizman1,*
The Marjorie B. Kovler Viral Oncology
Laboratories1 and Department of
Radiation and Cellular Oncology,2 The
University of Chicago, Chicago, Illinois 60637
Received 24 March 2000/Accepted 3 June 2000
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ABSTRACT |
The transition from G1 to S phase in the cell cycle
requires sequential activation of cyclin-dependent kinase 4 (cdk4) and cdk2, which phosphorylate the retinoblastoma protein, causing the
release of E2F. Free E2F upregulates the transcription of genes
involved in S phase and cell cycle progression. Recent studies from
this and other laboratories have shown that herpes simplex virus 1 stabilizes cyclin D3 early in infection and that early events in viral
replication are sensitive to inhibitors of some cdks. On the other hand
cdk2 is not activated. Here we report studies on the status of members
of E2F family in cycling HEp-2 and HeLa cells and quiescent
serum-starved, contact-inhibited human lung fibroblasts. The results
show that (i) at 8 h postinfection or thereafter, E2F-1 and E2F-5
were posttranslationally modified and/or translocated from nucleus to
the cytoplasm, (ii) E2F-4 was hyperphophorylated, and (iii) overall,
E2F binding to cognate DNA sites was decreased at late times after
infection. These results concurrent with those cited above indicate
that late in infection activation of S-phase genes is blocked both by
posttranslational modification and translocation of members of E2F
family to inactive compartments and by the absence of active cdk2. The
observation that E2F were also posttranslationally modified in
quiescent human lung fibroblasts that were not in S phase at the time
of infection suggests that specific viral gene products are responsible
for modification of the members of E2F family and raises the
possibility that in infected cells, activation of the S phase gene is
an early event in viral infection and is then shut off at late times.
This is consistent with the timing of stabilization of cyclin D3 and the events blocked by inhibitors of cdks.
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INTRODUCTION |
Studies from this and other
laboratories have shown that herpes simplex virus 1 (HSV-1) infection
of susceptible cells has a profound effect on the infected cell
(28). More recent studies have focused on the effect of
viral gene products on the proteins that regulate the cell cycle. The
studies described in this report have as their genesis the observation
that the HSV-1 promiscuous transactivator infected-cell protein 0 (ICP0) stabilizes cyclin D3 without affecting its interaction with
cyclin-dependent kinase 4 (cdk4) or phosphorylation of retinoblastoma
protein (pRb) (17). In later studies, it was shown that
substitution of a single amino acid in ICP0 abrogates the binding and
stabilization of cyclin D3 and reduces the neuroinvasiveness of the
mutant from a peripheral site (38). The observation that
other herpesviruses either bind the cyclin D appropriate for the cells
in which they replicate (Epstein-Barr virus) or encode a functional D
cyclin homolog (human herpesvirus 8 and herpesvirus saimiri) suggested
that herpesviruses depend on the function of D cyclins for optimal
replication and raised the possibility that this function involves
activation of S-phase-related genes (19, 25, 33, 35, 36).
One well-characterized function of cyclin D is to complex with cdk4 or
cdk6 and to phosphorylate pRb (16, 21). In the process, pRb
releases its grip on E2F. In turn, free E2F binds to cognate sites in
promoters of genes expressed during S phase (5, 11, 14). A
central question therefore is whether the stabilization of cyclin D3 in
cells infected with wild-type HSV-1 causes an increase in the free E2F
proteins measured by their binding to cognate DNA sites. This report
deals with cells infected within a short time after synchronization and
infection of quiescent human fibroblasts. We report that in these cells
the levels of E2F capable of binding to cognate sites on its DNA
remained similar to that of uninfected cells during the first 4 h
after infection but was reduced at least sixfold between 4 and 8 h
after infection in cycling and by 30% in quiescent cells. Of
particular interest is the emergence in HSV-1-infected cells of E2F-1,
E2F-2, E2F-4, and E2F-5 protein characterized by altered mobility in
denaturing gels. Relevant to this report are the following findings.
(i) The E2F family of transcription factors is currently composed of
six known members (E2F-1 to E2F-6). The E2F family members can be
classified into two groups. E2F-1, -2, and -3 accumulate in a cell
cycle-dependent manner, have a nuclear localization signal, and induce
S-phase progression (24, 39). E2F-4 and -5 levels are
relatively constant throughout the cell cycle, their subcellular
localization is dependent on associated proteins, and they are poor
inducers of S phase. All family members form heterodimers with DP1 or
DP2 (reviewed in references 2 and 11). The
transcriptional activity of E2F is repressed when complexed to pRb
pocket proteins (10). The transition from G1 to
S phase involves sequential activation of cyclin D-cdk4 and cyclin
E-cdk2 kinase complexes (22). Both cyclin D-cdk4 and cyclin
E-cdk2 phosphorylate pRb to release E2F and initiate the transcription of E2F-dependent genes.
(ii) E2F-1, the most thoroughly characterized member of the E2F family,
is capable of activating transcription of a variety of genes involved
in cellular DNA synthesis (DNA polymerase
-dihydrofolate reductase
and ribonucleotide reductase) and cell cycle progression (cdk2 and
cyclin A) (5, 11). E2F-1 can function as both an oncogene
and a tumor suppressor. An apparently contradictory function of E2F-1
is its role in promoting apoptosis (9, 42). The induction of
apoptosis by E2F-1 is in part mediated by its ability to bind DNA.
(iii) At least three families of DNA viruses have been reported to
encode viral proteins that accelerate the onset of S phase in the
infected cell by targeting the release of E2F from pRb (6,
7). Thus, the adenovirus E1a, the papillomavirus E7, and simian
virus-40 T antigen have been reported to disrupt pRb-E2F complexes
(4, 6, 40).
In addition to the studies reported above (17, 38) recently
several laboratories have reported on the effects of HSV-1 infection on
cellular proteins involved in cell cycle regulation. (i) Replication of
HSV-1 is reduced in cells following the addition of high concentrations
of inhibitors of cdk2, cdc2, and cdk5 (15, 30-32). (ii)
HSV-1 causes the activation of the G2/M kinase cdc2 even
though cyclin A and B levels are reduced (1). (iii)
Overexpression of ICP0 results in cell cycle arrest at the
G1 and G2/M phases (13, 20). (iv)
HSV-1 infection results in a block in S-phase progression and
hypoactivated cdk2 (3, 7). (v) A fraction of pRb in HSV-1
infected cells is alternatively phosphorylated (30). (vi)
pRb and p53 have been reported to localize to sites of viral DNA
replication in HSV-1-infected cells (41). (vii) HSV-1
induces in infected cells free and heteromeric forms of E2F as measured
by gel shift assays (12). (vii) E2F-4 is translocated from
the cytoplasm into the nucleus following infection, which is
reminiscent of the G0 phase of the cycle (26).
Since some viruses target pRb and cytomegalovirus phosphorylates E2F
proteins (23, 27), the objective of this study was to
characterize the effect of HSV-1 infection on E2F and the ability of
HSV-1-modified E2F to bind to DNA.
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MATERIALS AND METHODS |
Cells and viruses.
HeLa and HEp-2 were initially obtained
from the American Type Culture Collection and maintained in Dulbecco
modified Eagle medium with 10% newborn calf serum. Human embryonic
lung (HEL) fibroblasts were obtained from Aviron (Mountain View,
Calif.) and maintained in 5% newborn calf serum. HSV-1(F) is the
prototype wild-type HSV-1 strain used in our laboratory (8).
Cell infection.
Confluent 150-cm2 flasks of HeLa
or HEp-2 cells were harvested and plated on 25-cm2 flasks.
Cells were allowed to adhere for 1 h, after which unattached cells
were aspirated. The attached cells were then exposed 2 × 107 PFU of HSV-1(F) in 1 ml of 199V (medium 199 supplemented with 1% calf serum) and placed on a rotary shaker at
37°C. After 2 h, the inoculum was replaced with 5 ml of fresh
Dulbecco modified Eagle medium supplemented with 10% newborn calf
serum, and the culture were incubated at 37°C until the cells were
harvested. Flasks (150 cm2) of HEL fibroblasts were grown
to confluence and held at confluence for 1 week to achieve
contact-inhibited and serum-starved conditions. Quiescent HEL
fibroblasts were infected as follows. Spent medium was aspirated from
the flasks and saved; 2 × 108 PFU of HSV-1(F) was
added to 6 ml of spent medium and overlaid on the cells. Mock-infected
cells were treated by the addition of a similar volume of milk buffer
into the spent medium. Infection proceeded for 2 h at 37°C on a
rotary shaker, after which the inoculum was replaced with 25 ml of
spent medium.
Cytoplasmic and nuclear fractionation.
Cells were harvested
at various time points as follows. The medium was removed; the cells
were rinsed in phosphate-buffered saline (PBS), scraped into 5 ml of
PBS, and pelleted by centrifugation. The cell pellet was gently
resuspended in hypotonic lysis buffer (10 mM HEPES [pH 7.5], 10 mM
KCl, 3 mM MgCl2, 0.05% NP-40, 1 mM EDTA, 10 mM NaF, 10 mM
-glycerophosphate, 1 mM dithiothreitol [DTT], 0.1 mM sodium
orthovanadate, 0.5 mM phenylmethylsulfonyl fluoride) by gently
pipetting up and down 10 times and kept on ice for 30 min. The lysate
was pelleted at 2,500 rpm (500 × g) for 5 min at
4°C. The cytoplasmic fraction (supernatant) was transferred to a new
tube. The pelleted nuclei were gently washed in hypotonic lysis buffer
and pelleted as above. The nuclei were lysed by resuspending the pellet
in high-salt lysis buffer (50 mM HEPES [pH 7.9], 250 mM KCl, 0.1%
NP-40, 0.1 mM EDTA, 10 mM NaF, 10 mM
-glycerophosphate, 1 mM DTT,
0.1 mM sodium orthovanadate, 0.5 mM phenylmethylsulfonyl fluoride, 5%
glycerol) and stored on ice for 30 min. The lysate was spun down at
14,000 rpm for 10 min at 4°C. Protein concentrations of the nuclear
and cytoplasmic fraction were determined using the Bradford assay
(Bio-Rad). Protein concentrations were then equalized between mock- and
HSV-1(F)-infected cells.
E2F oligonucleotide labeling.
E2F consensus DNA binding
oligonucleotide was purchased from Santa Cruz Biotechnology (sc-2507).
Alternatively, oligonucleotides were synthesized to the E2 promoter
sequence and dihydrofolate reductase promoter sequence corresponding to
E2F binding sites. The oligonucleotide was end labeled with
32P as follows. Three picomoles of oligonucleotide, 150 µCi of [
-32P]ATP, 15 U of bacteriophage T4
polynucleotide kinase, and bacteriophage T4 polynucleotide kinase
buffer were reacted in 20 µl (total volume) at 37°C for 45 min. The
T4 polynucleotide kinase was inactivated by heating the reaction
mixture at 68°C for 10 min. Labeled oligonucleotide was separated
from free [
-32P]ATP by Sephadex G-50 spin column
chromatography and stored at
20°C.
E2F electrophoretic mobility shift and supershift assays.
The binding reaction mixture contained 0.5 to 10 µg of protein, 3 µg of poly(dI-dC), 0.5 ng of 32P-labeled E2F consensus
sequence oligonucleotide, binding buffer (5× = 100 mM HEPES [pH
7.9], 200 mM KCl, 30 mM MgCl2, 5 mM DTT, 25% glycerol,
0.5% NP-40, 5 mM EDTA). The binding reaction was brought up to a total
volume of 20 to 30 µl. Binding reactions mixtures with unlabeled cold
excess of E2F oligonucleotide consensus binding sequence had 50 ng
(100-fold excess) of unlabeled E2F consensus sequence oligonucleotide.
Binding reactions were carried out for 20 min at room temperature.
Samples were then loaded onto 4% nondenaturing polyacrylamide gels and
subjected to electrophoresis in Tris-borate-EDTA buffer for 75 min at
180 V. Gels were dried and analyzed by a PhosphorImager (Storm 860;
Molecular Dynamics) and autoradiography.
Supershift assays described initially by Kristie and Roizman
(18) were done as follows. The reaction was carried out in 20 µl (total volume). After addition of the labeled probe, the reaction mixture described above was stored for 20 min at room temperature. Then 2 µl of appropriate antibody was added, and the
reaction mixtures were stored for an additional 30 min at room
temperature and then loaded onto gels as above.
Immunoblotting.
Cytoplasmic and nuclear fractions were
denatured by boiling in disruption buffer (final concentration of 2%
sodium dodecyl sulfate [SDS], 50 mM Tris [pH 7.2], 2.75% sucrose,
5%
-mercaptoethanol, and bromophenol blue) was added to equivalent
amounts of protein from samples. The extracts were boiled for 5 min,
subjected to electrophoresis on 8 or 10% bisacrylamide gels,
transferred to nitrocellulose membranes, blocked for 2 h with 5%
nonfat dry milk, and reacted with the appropriate antibody. Antibodies
against E2F-1, E2F-2, E2F-3, E2F-4, and E2F-5 (Santa Cruz) were diluted 1:200 in PBS with 0.05% Tween 20 and 1% bovine serum albumin and reacted for 2 h at room temperature. The immunoblots were exposed to the secondary antibodies diluted 1:3,000 (alkaline phosphatase [AP] conjugated [Bio-Rad] or peroxidase conjugated [Sigma]) for 1 h. To develop AP-conjugated secondary antibodies, the
immunoblots were reacted with AP buffer (100 mM Tris [pH 9.5], 100 mM
NaCl, 5 mM MgCl2), followed by AP buffer containing
5-bromo-4-chloro-3-indolyl phosphate and nitroblue tetrazolium. The
reaction was stopped by the addition of Tris (pH 7.6) and 10 mM EDTA.
Peroxidase-conjugated secondary antibodies were developed by enhanced
chemiluminescence according to instructions supplied by the
manufacturer (Pierce). All rinses were done in PBS containing 0.05%
Tween 20.
AP treatment.
Nuclear and cytoplasmic fractions of cells
were harvested as above except that lysis was done with or without the
addition of phosphatase inhibitors (NaF,
-glycerophosphate, and
sodium orthovanadate) to the hypotonic and high-salt lysis buffers.
Equivalent amounts of protein from samples were reacted with 5 U of
calf intestine alkaline phosphatase (CIAP) and appropriate reaction buffer for 30 min at 34°C. Reactions were stopped by the addition of
gel loading buffer. Samples were assayed by immunoblotting as described above.
 |
RESULTS |
HSV-1 infection results in the accumulation of novel isoforms of
E2F-1 in cycling cells and accumulation of a high-molecular-weight
isoform in quiescent cells.
Infected or mock-infected HEp2 or HeLa
cells were fractionated into nuclear and cytoplasmic extracts. The
lysates were subjected to electrophoresis in a denaturing gel,
transferred to a nitrocellulose sheet, and reacted with antibodies to
E2F-1. E2F-1, a predominantly nuclear protein, was found almost
exclusively in the nuclear fraction of uninfected HeLa or HEp2 cells
(Fig. 1). The results show that at 4 h after infection, nuclear extracts of infected HeLa cells formed two
prominent E2F-1 bands that could not be differentiated from those of
mock-infected cells. An additional E2F-1 band migrating between the two
prominent bands was formed by lysates of HeLa cells harvested at 8 or
16 h after infection. This E2F-1 band specific for HSV-1-infected
cells was formed by lysates of HEp-2 cells harvested as early as 4 h after infection (Fig. 1). While the cytoplasmic fractions of
mock-infected HeLa or HEp2 cells harvested at 4, 8, or 16 h after
infection contained only trace amounts of E2F-1, the cytoplasmic
fraction of cells harvested at 8 and 16 h (HeLa) or 16 h
(HEp-2) after infection each formed a single prominent E2F-1 band (Fig.
1). The electrophoretic mobility of this band was slower that of bands
formed by nuclear extracts of mock-infected or infected cells.

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FIG. 1.
Immunoblot of cytoplasmic (Cyto.) and nuclear (Nuc.)
fractions of uninfected or HSV-1(F)-infected HeLa and HEp-2 cell
lysates separated on bisacrylamide gels and reacted with antibody to
E2F-1 as described in Materials and Methods. The cells were infected at
time zero and harvested at the indicated times after infection.
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Quiescent mock-infected cells had low levels of E2F-1 as expected since
E2F-1 transcription is cell cycle dependent (Fig.
2). In contrast, infected cells
accumulated a high-molecular-weight
E2F-1 species (Fig.
2). This form
is present at relatively low
levels in mock-infected cells but was
readily detected in both
nuclei and cytoplasm by 8 h after
infection. In view of the results
shown above, it was of interest to
determine whether other E2F
family members were also modified following
infection with HSV-1(F).

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FIG. 2.
Immunoblot of cytoplasmic and nuclear fractions of
uninfected or HSV-1(F)-infected serum-starved, contact-inhibited HEL
fibroblasts lysates separated on bisacrylamide gels and reacted with
antibody to E2F-1. Cells were infected at time zero and harvested at
the indicated times after infection.
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E2F-2 accumulates in decreased amounts in infected cells.
The
results of an experiment similar to those reported above indicated that
the quantity and electrophoretic mobility of E2F-2 accumulating in
cells during the first 8 h after infection could not be
differentiated from that of mock-infected cells in cycling HEp-2 cells
(Fig. 3). At 16 h after infection,
there was a decrease in the accumulation of nuclear E2F-2 (Fig. 3). In
HEL fibroblasts, nuclear E2F-2 migrated as a doublet (Fig.
4). In mock-infected cells, there was an
equivalent amount of each isoform of E2F-2, whereas HEL fibroblasts
accumulated predominantly the upper form of E2F-2 at 8 and 12 h
after infection. A small but equal proportion of E2F-2 was found in the
cytoplasm of mock-infected or HSV-1-infected cells between 4 and
12 h after infection (data not shown).

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FIG. 3.
Immunoblot of nuclear fractions of uninfected or
HSV-1(F)-infected HEp-2 cell lysates separated on bisacrylamide gels
and reacted with antibody to E2F-2. Cells were infected at time zero
and harvested at the indicated times after infection.
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FIG. 4.
Immunoblot of nuclear fractions of uninfected or
HSV-1(F)-infected serum-starved, contact-inhibited HEL fibroblasts
lysates separated on bisacrylamide gels and reacted with antibody to
E2F-2. Cells were infected at time zero and harvested at the indicated
times after infection.
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HSV-1 causes posttranslational modification of E2F-4.
It was
reported earlier (26) that E2F-4 was modified and
translocated to the nucleus of HSV-1-infected cells. Our studies of
E2F-4 yielded the following results. (i) In noninfected HEp-2 cells,
E2F-4 localized in both the cytoplasmic and nuclear fractions and
formed one major band and several fainter, both faster- and slower-migrating bands (Fig. 5, lanes 1, 5, 9, and 13). In HSV-1-infected cells, E2F-4 present in both
cytoplasmic and nuclear fractions formed a large number of bands that
tended to increase in Mr range from 55,000 to
76,000 with time after infection (lanes 3, 7, 11, and 15). The
high-apparent-molecular-weight bands were particularly prominent in
electrophoretic profiles of nuclear fractions of infected cells (lanes
7 and 15).

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FIG. 5.
Immunoblot of cytoplasmic and nuclear fractions of
uninfected or HSV-1(F)-infected HEp-2 cell lysates treated with or
without CIAP, separated on bisacrylamide gels, and reacted with
antibody to E2F-4. Cells were infected at time zero and harvested at
the indicated times after infection. The boxed region indicates the
isoforms of E2F-4 detected.
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E2F-4 formed three closely migrating isoforms and accumulated
predominantly in the nuclear fraction of mock-infected HEL fibroblasts
(Fig.
6, lanes 7, 9, and 11).
HSV-1-infected cells accumulated
the highest-apparent-molecular-weight
species of E2F-4 by 8 h
after infection (lanes 4 and 10) in both
cytoplasmic and nuclear
fractions which remained at 12 h after
infection (lanes 6 and
12).

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FIG. 6.
Immunoblot of cytoplasmic and nuclear fractions of
uninfected or HSV-1(F)-infected serum-starved, contact-inhibited HEL
fibroblasts lysates separated on bisacrylamide gels and reacted with
antibody to E2F-4. Cells were infected at time zero and harvested at
the indicated times after infection. Multiple E2F-4-reactive bands were
observed as indicated by the vertical lines.
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HSV-1 effects on E2F-5.
E2F-5 present in mock-infected HEp-2
cells revealed two prominent bands (Fig.
7, lane 1). E2F-5 in lysates of cells
harvested at 14 h after infection with HSV-1 accumulated in
addition a third isoforms whose electrophoretic mobility was
intermediate between those of the two isoforms present in mock-infected
cells (lanes 1 and 2).

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FIG. 7.
Immunoblot of nuclear fractions of uninfected or
HSV-1(F)-infected HEp-2 cell lysates separated on bisacrylamide gels
and reacted with antibody to E2F-5. Cells were infected at time zero
and harvested at 14 h after infection.
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E2F-5 present in mock-infected HEL fibroblasts was present solely in
nuclei and also formed two bands. The same two bands
were present
nuclei of infected cells harvested at 4 and 8 h after
infection
(Fig.
8, lanes 1 to 5, and 7 to 11). In
cells harvested
at 12 h after infection, only the slower-migrating
isoform was
present in detectable amounts. Furthermore, the same
isoform was
also detected in the cytoplasmic fraction of infected HEL
fibroblasts
harvested at 12 h after infection (lanes 6 and 12).

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FIG. 8.
Immunoblot of cytoplasmic and nuclear fractions of
uninfected or HSV-1(F)-infected serum-starved, contact-inhibited HEL
fibroblasts lysates separated on bisacrylamide gels and reacted with
antibody to E2F-5. Cells were infected at time zero and harvested at
the indicated times after infection.
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AP treatment of E2F-1 and E2F-4 accumulating in HSV-1-infected
cells.
E2F proteins are known to be regulated by phosphorylation.
Multiple bands of E2F-1 have been observed by immunoblotting, and these
coalesce into a single band following phosphatase treatment of the cell
extract (43). E2F-4 has a hyperphosphorylated form that that
also migrates faster in denaturing gels after phosphatase treatment
(37). The phosphorylated form of E2F-4 is thought to act as
a transcriptional repressor. The transition to G1 and S
results in a dephosphorylated form that can no longer act as a
transcriptional repressor. To determine if HSV-1 infection resulted in
the preferential accumulation of specific phosphorylated forms of E2F-1
and E2F-4, two sets of experiments were done.
In the first, nuclear extracts from mock-infected or HSV-1-infected
cells were treated with CIAP. Digestion of mock-infected
and
HSV-1-infected nuclear extracts with CIAP resulted in the
accumulation
of an E2F-1 that migrated more rapidly than seen
in untreated extracts
(Fig.
9). Inasmuch as phosphatase
inhibitors
nullified the effect of CIAP (data not shown), the changes
in
electrophoretic mobility are due to dephosphorylation rather than
proteolytic cleavage of the E2F-1 proteins.

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FIG. 9.
Immunoblot of nuclear fractions of uninfected or
HSV-1(F)-infected HEp-2 cell lysates treated with or without CIAP,
separated on bisacrylamide gels, and reacted with antibody to E2F-1.
Cells were infected at time zero and harvested at the indicated times
after infection.
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Similar experiments were done to determine whether the slower-migrating
forms of E2F-4 accumulating in infected cells were
posttranslationally
modified by phosphorylation. In this experiment,
both cytoplasmic and
nuclear fractions of mock-infected or infected
cells were treated with
CIAP and analyzed by immunoblotting with
anti E2F-4 antibody (Fig.
5).
With one exception, CIAP drastically
reduced the number and increased
the electrophoretic mobility
of E2F-4 present in both nuclear and
cytoplasmic fractions of
infected cells (compare lanes 3 and 4, 7 and
8, and 15 and 16).
The exception was the E2F-4 contained in the
cytoplasmic fraction
at 16 h after infection (compare lanes 11 and
12). In this instance,
CIAP treatment resulted in a decrease in the
electrophoretic mobility
of all bands, but these did not acquire the
electrophoretic mobility
of E2F-4 accumulating in the cytoplasm of
uninfected cells. Phosphatase
digestion of E2F-4 present in
mock-infected cells also led to
a increase in electrophoretic mobility
and, in the case of nuclear
extracts, resulted in the appearance of a
second, prominent, slower-migrating
band (compare lanes 5 and 6 and
lanes 13 and 14). Similar studies
on lysates of HEL fibroblasts
revealed that the slow-migrating
form of E2F-4 present in
HSV-1-infected cells was in part phosphorylated
(data not
shown).
We conclude from the experiments described in this section that E2F-1,
E2F-4, and E2F-5 accumulating in infected cells undergo
novel
posttranslational modifications that differ from those of
mock-infected
cells. The posttranslational modifications involved
primarily
phosphorylation inasmuch as after phosphatase digestion,
the E2F-4 and
E2F-1 proteins contained in extracts of infected-cell
nuclei could not
be differentiated from those of uninfected cells.
This conclusion may
not be applicable to E2F-4 contained in cytoplasmic
extracts obtained
16 h after infection. In this instance, additional
modifications
may have taken
place.
E2F proteins accumulating in nuclei of infected cells cease to bind
to cognate sites on DNA.
To determine the state of E2F DNA binding
activity in HSV-1-infected cells, electrophoretic mobility shift assays
were done with labeled DNA fragments containing the E2F consensus
binding site and nuclear or cytoplasmic extracts of mock-infected or
HSV-1(F)-infected HeLa cells. The results (Fig.
10) were as follows.

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FIG. 10.
E2F DNA electrophoretic mobility shift assay of
cytoplasmic and nuclear fractions of uninfected or HSV-1-infected HeLa
cell lysates. Cells were infected at time zero and harvested at the
indicated times. Increasing amounts of protein extract (0.5, 1, 5, and
10 µg) were reacted with 32P-end-labeled DNA with the E2F
consensus binding site. To determine if the gel shift bands were
competable, 100-fold excess unlabeled probe was added to 10 mg of each
extract (lanes 5, 10, 15, and 20). Bands that were competable are
labeled with a dark line.
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(i) The cytoplasmic extracts of mock-infected and infected HeLa cells
each formed three identical E2F-DNA bands. The formation
of the bands
was protein extract dose dependent. The bands attained
saturation in
the presence of 5 µg of
protein.
(ii) The nuclear extracts of mock-infected or of 4-h-infected cells
each formed two E2F-DNA bands. The bands formed by infected-cell
extracts could not be differentiated from those of uninfected
cells
with respect to electrophoretic mobility, but the total
E2F binding DNA
in nuclei of infected cells was decreased relative
to that of
mock-infected
cells.
(iii) At 8 h after infection, there was an increase in the amount
of the slow-migrating E2F-DNA band formed by cytoplasmic
extract of
infected cells compared to that of mock-infected cells
(Fig.
10). There
was little or no change in either amount or electrophoretic
mobility of
E2F-DNA complexes formed by nuclear extracts of mock-infected
cells. In
contrast, there was a significant loss of E2F DNA binding
activity in
nuclei of infected cells compared with those of uninfected
cells (Fig.
10, lanes 16 to 19 compared to lanes 11 to 14). Quantification
with the
aid of the PhosphorImager indicated that at 8 h after
infection,
the residual DNA binding activity representing less
than 15% of the
E2F DNA binding activity of mock-infected cells.
Also, infected nuclei
contained mainly the faster-migrating E2F-DNA
complex, with almost
complete loss of the slower-migrating
complex.
(iv) At 16 h after infection, there was a decrease in the amounts
of fast-migrating E2F-DNA complex but no significant difference
in the
electrophoretic mobility or abundance of the complexes
formed by
cytoplasmic fractions of mock-infected or infected cells.
The E2F DNA
complexes formed by nuclear extracts of mock-infected
or infected cells
could not be differentiated from those formed
by corresponding extracts
of cells harvested at 8 h after
infection.
Identification of the member of the E2F family bound to cognate DNA
sequences.
In this series of experiments, mixtures of HEp-2 cell
extracts and DNA oligonucleotides containing an E2F binding site
described above were reacted with antibody to either E2F-1, E2F-2,
E2F-3, or E2F4 and then subjected to electrophoresis on nondenaturing gels as described in Materials and Methods. The results (Fig. 11) were as follows.

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|
FIG. 11.
E2F DNA electrophoretic mobility shift and supershift
assays of nuclear fractions of uninfected or HSV-1(F)-infected HEp-2
cell lysates. Cells were infected at time zero and harvested at
indicated times; 5 µg of protein extract was subjected to gel shift
assay without antibody (Ab.; lanes 1 and 2). Supershift assays were
done with the indicated antibodies as described in Materials and
Methods (lanes 3 to 10).
|
|
(i) Protein-DNA complexes formed by lysates of mock-infected cells
harvested at 2, 4, 8, or 16 h after synchronization formed
two
bands (Fig.
11, lane 1). (ii) The same set of bands were formed
by
protein-DNA complexes extracted from cells 2 and 4 h after
synchronization and infection. Extracts from cells infected for
8 and
16 h formed the fast-migrating but not the slow-migrating
band,
and the fast-migrating form was reduced in abundance in
HSV-infected
nuclear extracts compared to mock-infected nuclear
extracts (lane 2).
(iii) Of the antibodies tested in this experiment,
only the antibody
against E2F-2 supershifted DNA-protein complexes.
Specifically, the
antibody shifted the fast-migrating DNA-protein
complex derived from
extracts of both infected and unnfected cells.
The observation that the
fast-migrating band disappeared almost
entirely concordant with the
appearance of the new, supershifted
band suggests that that
fast-migrating band consisted predominantly
of the E2F-2-DNA complex
(lanes 3 to
10).
E2F-2 is also the predominant E2F family member in HEL
fibroblasts.
Experiments similar to those described above were
also done with extracts of mock-infected or infected quiescent,
contact-inhibited HEL fibroblasts. In this instance, the DNA-protein
complexes were fainter but more numerous. To identify specific
protein-DNA complexes, excess unlabeled DNA was added to mixtures
containing probe and extracts from cells harvested at 4 h after
mock infection and mixtures containing extracts of cells infected for
12 h after infection. The results were as follows.
(i) Cytoplasmic extracts of mock-infected HEL fibroblasts formed a
faint slow-migrating and a slightly more visible fast-migrating
DNA-protein complex competed by the addition of excess unlabeled
DNA
probe (Fig.
12A, compare lanes 1 and
5). The slow-migrating
E2F-DNA complex bands formed by cytoplasmic
extracts of infected
cells (compare lanes 1, 4, and 6) was competed by
excess unlabeled
probe, whereas as slower-migrating DNA-protein complex
could not
be competed by excess unlabeled probe. (ii) Nuclear extracts
of
mock-infected HEL fibroblasts formed a pair of more intense bands
(Fig.
12B, lane 8). Of these, the slower-migrating band was not
detectable among the bands formed by nuclear extracts of cells
harvested at 8 h after infection (lanes 8 to 11). The most
prominent
band also decreased over the course of infection. (iii) The
supershift
assays were done on DNA-protein complexes derived from
uninfected
cells (Fig.
12C). Of the antibodies tested, only anti-E2F-2
caused
the quantitative disappearance of the fast-migrating DNA-protein
complex an the appearance of a new, supershifted band (lanes 15
and
17).

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|
FIG. 12.
E2F DNA electrophoretic mobility shift assays of
cytoplasmic (A) and nuclear (B) fractions of uninfected or
HSV-1(F)-infected serum-starved, contact-inhibited HEL fibroblasts
lysates. Cells were infected at time zero and harvested at indicated
times; 5 µg of protein extract was subjected to gel shift assay.
Circles are next to bands specific to either uninfected or
HSV-1(F)-infected lysates. Competable gel shift bands were determined
by the addition of 100-fold excess unlabeled DNA probe (lanes 5, 6, 12, and 13). Labeled probe without protein extract was loaded in lanes 7 and 14. (C) E2F DNA electrophoretic mobility supershift assays with
nuclear lysate of uninfected HEL fibroblast lysates. The square shows
the shift upward of a E2F-2-DNA complex.
|
|
 |
DISCUSSION |
The consensus of the studies carried out in several laboratories
and detailed in the introduction is that HSV selectively modifies cell
cycle proteins and that in the instances in which this has been
critically examined, the modifications are dependent on the presence of
specific viral gene products. The studies described in this report are
a sequel of studies initiated several years ago and are based on the
observation that ICP0 binds and stabilizes cyclin D3 (17).
In principle, cyclin D3-cdk4 complex together with the downstream
cyclin E-cdk2 should phosphorylate pRB, release the bound members of
the E2F family, and activate the S phase of the DNA cycle. At least at
times in the viral replicative cycle tested, this does not appear to be
the case. Thus, in the mid or late times during the viral replicative
cycle, pRB is hypophosphorylated and cdk2 is not activated (7,
34). Consistent with the logical inferences arising from these
results, other studies have shown that HSV-1 infection results in the
accumulation of heteromeric forms of E2F that in part contain pRb
(12). Also, E2F-4 had been shown to accumulate in the
nucleus as a hyperphosphorylated form (26). While these
studies would suggest that E2F proteins are not released, it has been
also shown that E1a and E7 proteins of adenovirus and human
papillomavirus, respectively, bind pRB directly and cause the release
of E2F (6, 40). Also, a cytomegalovirus-encoded kinase has
been shown to directly phosphorylate E2F molecules (27). The
studies described in this report focused on the status of the members
of the E2F family both in cycling (HEp-2 and HeLa) cells and in
quiescent HEL fibroblasts. Our results may be summarized as follows:
(i) E2F-1 was found predominantly in nuclei of mock-infected HeLa or
HEp-2 cells. In infected cells, E2F-1 was in part translocated into the
cytoplasm, and both the nuclear and cytoplasmic E2F-1 acquired a slower
electrophoretic mobility in denaturing polyacrylamide gels. E2F-5 was
present solely in the nuclei of infected or mock-infected cells. In
this instance, least a fraction of the protein was modified with
respect to electrophoretic mobility. For E2F-4, novel
hyperphosphorylated forms were found in both the cytoplasmic and
nuclear fractions of infected cells. E2F-2 detected in mock-infected
cells could not be differentiated with respect to amounts of
electrophoretic mobility from those detected in cells harvested until
at least 12 h after infection. At 16 h after infection, there
was a decrease in the amounts of detectable E2F-2.
(ii) The studies on infected quiescent, contact-inhibited HEL
fibroblasts revealed that members of E2F family were subjected to
posttranslational processing or translocation even in the absence of
cell cycle progression. The majority of modifications in E2F molecules
occurred by 8 h after infection. Thus, a high-molecular-weight E2F-1 species accumulated in the nuclear and cytoplasmic fraction of
HEL fibroblasts by 8 h after HSV-1 infection. E2F-2 present in the
nuclear fraction also preferentially migrated as a
higher-molecular-weight species. E2F-4 forms rearranged from the three
predominant forms in uninfected cells to a high-molecular-weight form
that was phosphorylated in both the nuclear and cytoplasmic fractions.
Whereas the electrophoretic mobility of E2F-5 remained unaltered, the
protein was at least in part translocated into the cytoplasm.
(iii) In G1/S synchronized cycling cells, E2F DNA binding
ability increased with time in mock-infected cells. Concurrent with posttranslational modifications described above, we observed a decrease
in the affinity of E2F contained in infected cells for cognate DNA
sites. Curiously, DNA probe-protein complex formed at least two (Fig.
10) and in some instances three (Fig. 11) bands differing in
electrophoretic mobility. All of the bands decreased in amount with
time after infection. However, only the antibody to E2F-2 reacted with
the proteins contained in these complexes, and in this instance the
antibody supershifted the entire DNA-protein complex, indicating that
the protein in that complex contained predominantly the E2F-2 member of
the E2F family. The possibility that in cultured cells E2F-2 is the
predominant E2F species was also suggested by the observation that
mock-infected HEL fibroblasts also contained E2F-2 which formed a
distinct DNA-protein band (Fig. 12).
The significance of the studies described in this report stem from the
following considerations.
(i) Cyclins and cdks are in part responsible for preparing the cellular
environment for particular phases of the cell cycle. The
G1/S transition is mediated by the sequential activation of cdk4/6 with D-type cyclins followed by cdk2/cyclin E (22).
The studies involving the use of cdk inhibitors suggest that they play
a crucial role in the transcription of genes early in infection. The
stabilization of cyclin D3 by ICP0 is also an early event inasmuch as
cyclin D3 persists only 6 to at most 10 h after infection (17, 38).
(ii) The conclusion based on the accumulation of cyclin D3 and its
partner, cdk4, and the effects of cdk inhibitors that at least some
aspects of S-phase genes are activated and play a role in viral
replication is marred by the observation reported elsewhere that cdk2,
is not activated and that the status of pRB is inconsistent with
activation of the S phase (30). In this study we show that E2F proteins either are extensively modified, are translocated to the
cytoplasmic compartment, or become inactive with respect to binding to
cognate DNA sites.
(iii) From our knowledge of the events occurring in the course of the
viral replicative cycle, the key events that could require the
involvement of G0/S-phase cyclins are early transcription of viral gene and viral DNA synthesis. Studies done many years ago
indicate that viral DNA synthesis is initiated sometime around 3 h
after infection (29). The changes in cell cycle proteins described to date appear to occur in most instances after 4 h after infection. In some instances they are delayed to as long as
12 h after infection.
The fundamental conclusion that must be reached from the studies
published to date is that the functions necessary to activate S-phase
genes are inoperative at late stages of infection, i.e., at 8 h
after infection or later in either cycling or quiescent cells. More
specifically, studies done to date do not rule a transient induction of
S-phase genes early in infection.
The curious issue that must also be addressed is the events taking
place in quiescent, contact-inhibited HEL fibroblasts. The observation
that several members of the E2F family were modified or translocated to
nonfunctional sites even though the cells were not in S phase at the
time of infection is at odds with the hypothesis that the virus evolved
functions to block the expression of S-phase genes. The obvious
question is why are E2F proteins modified late in infection of
quiescent cells. One hypothesis is that E2F proteins transiently
performed their natural roles and were then shut off. An alternative
hypothesis is that HSV encodes functions that modify members of the E2F
family irrespective of the status of the cell cycle. Analyses now in
progress on the transcripts of cellular genes made in cells early in
infection may ultimately yield the answer to this question.
 |
ACKNOWLEDGMENTS |
We thank Renato Brandimarti, Guo-Jie Ye, and Veronica Galvan for
invaluable discussions.
This study was aided by Public Health Service grants CA47451, CA71933,
and CA78766 from the National Cancer Institute.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: The Marjorie B. Kovler Viral Oncology Laboratories, The University of Chicago, 910 E. 58th St., Chicago, IL 60637. Phone: (773) 702-1898. Fax: (773) 702-1631. E-mail: bernard{at}cummings.uchicago.edu.
 |
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Journal of Virology, September 2000, p. 7842-7850, Vol. 74, No. 17
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