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Journal of Virology, August 1999, p. 6882-6891, Vol. 73, No. 8
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Three-Dimensional Structure of Aleutian Mink
Disease Parvovirus: Implications for Disease Pathogenicity
Robert
McKenna,1
Norman H.
Olson,2
Paul R.
Chipman,2,
Timothy S.
Baker,2
Tim F.
Booth,3,
Jesper
Christensen,4
Bent
Aasted,4
James M.
Fox,5
Marshall E.
Bloom,5
James B.
Wolfinbarger,5 and
Mavis
Agbandje-McKenna1,*
Department of Biological Sciences, University
of Warwick, Coventry CV4 7AL,1 and NERC
Institute of Virology and Environmental Microbiology, Oxford OX1
3SR,3 United Kingdom; Department of
Biological Sciences, Purdue University, West Lafayette, Indiana
47907-13922; Laboratory of Virology and
Immunology, Department of Veterinary Microbiology, The Royal Veterinary
and Agricultural University, Copenhagen,
Denmark4; and Laboratory of
Persistent Viral Diseases, National Institute of Allergy and Infectious
Diseases, Hamilton, Montana 598405
Received 30 November 1998/Accepted 15 April 1999
 |
ABSTRACT |
The three-dimensional structure of expressed VP2 capsids of
Aleutian mink disease parvovirus strain G (ADVG-VP2) has
been determined to 22 Å resolution by cryo-electron microscopy and image reconstruction techniques. A structure-based sequence alignment of the VP2 capsid protein of canine parvovirus (CPV) provided a means
to construct an atomic model of the ADVG-VP2 capsid. The ADVG-VP2 reconstruction reveals a capsid structure with a
mean external radius of 128 Å and several surface features similar to
those found in human parvovirus B19 (B19), CPV, feline panleukopenia virus (FPV), and minute virus of mice (MVM). Dimple-like depressions occur at the icosahedral twofold axes, canyon-like regions encircle the
fivefold axes, and spike-like protrusions decorate the threefold axes.
These spikes are not present in B19, and they are more prominent in ADV
compared to the other parvoviruses owing to the presence of loop
insertions which create mounds near the threefold axes. Cylindrical
channels along the fivefold axes of CPV, FPV, and MVM, which are
surrounded by five symmetry-related
-ribbons, are closed in
ADVG-VP2 and B19. Immunoreactive peptides made from segments of the ADVG-VP2 capsid protein map to residues in
the mound structures. In vitro tissue tropism and in vivo pathogenic properties of ADV map to residues at the threefold axes and to the wall
of the dimples.
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INTRODUCTION |
Aleutian mink disease parvovirus
(ADV) causes chronic disease and persistent infection in mink as
manifested by marked hypergammaglobulinemia, plasmacytosis, and immune
complex disease (18, 48, 49). Though a large fraction of the
elevated gammaglobulins in infected mink is directed against the viral
particle, the virus is not neutralized in vivo but circulates as
infectious virus-antibody complexes. Disease caused by ADV differs
significantly from that caused by other parvoviruses in which infection
leads to a protective host response. For ADV, the presence of the
capsid elicits a host response that actually contributes to the disease
process (50, 51). Recent studies, in which the ADV capsid
proteins were expressed in a series of nonoverlapping fragments,
indicate that the unusual antibody response is targeted to specific
epitopes (19).
The ADV capsid is a critical determinant of cellular host range and
pathogenicity. For example, ADV-Utah 1 is highly pathogenic and does
not grow in cell culture, whereas ADV-G replicates permissively in cell
culture and is nonpathogenic in mink (6, 15, 20, 37).
Analysis of full-length molecular clones that are chimeric between
ADV-G and ADV-Utah has mapped the determinants which regulate these
characteristics to capsid gene sequences (16, 17). Similar differences in tissue tropism and pathogenicity have also been mapped
to the capsid genes for other parvoviruses, such as porcine parvovirus
(PPV), minute virus of mice (MVM), and the closely homologous canine
parvovirus (CPV) and feline panleukopenia virus (FPV) (3, 5, 11,
12, 14, 22, 35, 36, 40, 46, 47, 62).
The central role of ADV virions in the genesis of immune disorder and
determination of host range and pathogenicity has focused attention on
the ADV capsid. ADV contains two viral capsid proteins, VP1 (85 kDa)
and VP2 (75 kDa), which are translated from the same mRNA
(7) and have identical sequences with the exception of 42 additional amino acids at the amino terminus of the minor capsid protein, VP1. Native ADV virions contain 60 protein subunits, with VP1
and VP2 comprising, respectively, about 10 and 90% of the total. ADV
capsid proteins expressed in recombinant vaccinia or baculovirus
self-assemble into particles which appear to have the physicochemical
and antigenic properties of native virions, though the ratio of VP1 to
VP2 in the expressed capsids is reversed (26, 27, 68).
Expressed VP2, the major capsid protein, can self-assemble into
native-like capsids in the absence of VP1 (26), as has also
been observed for other parvoviruses in mammalian cells
(64).
The atomic structures of CPV, FPV, and MVM have been determined by
X-ray crystallography techniques (3, 5, 41, 63, 69).
Particles of these viruses contain a total of 60 copies of the capsid
proteins, VP1, VP2, and VP3, in full (DNA-containing) virions
(59). VP3 is formed in full virions (but not empty capsids) by cleavage of approximately 20 amino acids from the amino terminus of
VP2 (28, 45, 60, 65). This cleavage process does not occur
in ADV or human parvovirus B19 (B19). The capsid structures of CPV,
FPV, and MVM consisted of 60 subunits of the region common to VP2. The
unique VP1 amino termini of these capsids were not observed in their
structures due to their low copy number (6 to 9%) in the capsid, which
results in signal weakening during the structure determination
averaging procedure utilizing noncrystallographic symmetry for
refinement and phase extension (54). The core of VP2 is
composed of an eight-stranded (strands B through I), antiparallel,
-barrel motif (55). Four large loop insertions between
the
strands primarily constitute the capsid surface structure. In addition, a cylindrical channel lies at each of the 12 fivefold icosahedral axes. The walls of the channel are formed by insertions between the D and E strands of the
-barrel. It is postulated that
one capsid protein at each fivefold axis has its N terminus externalized via the channel, and this enables maturation cleavage of
VP2 to VP3 in virions, consistent with biochemical data (28, 45,
60, 65). The capsids of these parvoviruses have a small, spike-like protrusion (referred to hereafter as the spike) along each
icosahedral threefold axis, a dimple-like depression (hereafter, the
dimple) at each icosahedral twofold axis, and a canyon-like depression
(hereafter, the canyon) around each fivefold axis. B19 differs slightly
from these parvoviruses. Though it has the
-barrel motif and the
variable surface loops, surface depressions rather than spikes occur at
the threefold axes and there is density on the fivefold axes (4,
25). This correlates with the observation that VP2 cleavage to
VP3 does not occur in B19 and hence supports the hypothesis that the
fivefold channel is the site of externalization of N termini during the
cleavage process that occurs in the other parvoviruses.
The available structural information indicates that differences in the
capsid surface are what determine tissue tropism, pathogenicity, and
antigenicity among different parvoviruses and among the strains of a
particular virus. For example, the spike region is highly immunogenic
in CPV and FPV (58, 67), and the dimple and canyon features
are postulated to be possible sites for receptor interactions (5,
13, 24, 61). Residues that confer tissue tropism for CPV, FPV,
and MVM are located at the top and shoulder of the spikes (5,
40) and in or near the dimples (3). The cellular receptor for B19, globoside, docks into the depression at the threefold
axes of the B19 capsid (25), which is surrounded by regions
where neutralizing antibodies are thought to bind, thus possibly
explaining the mechanism for B19 neutralization.
Here, we present a cryo-electron microscopy (cryo-EM) and
three-dimensional (3D) image reconstruction study of the structure at
22 Å resolution of baculovirus-expressed VP2 particles of ADV strain G
(ADVG-VP2). We also report a modified amino acid sequence alignment of the ADV-G and CPV VP2 proteins, based in part on knowledge
of the atomic structure of CPV. This alignment provided a rationale for
generating a pseudoatomic model of the ADVG-VP2 capsid and
fitting it into the cryo-EM density map. Analysis of this model shows
that protrusions on the capsid surface, like that of other
parvoviruses, serve as antigenic sites. The model also reveals possible
sites near or at the twofold and threefold axes of the capsid that may
contribute to tissue tropism and disease pathogenicity.
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MATERIALS AND METHODS |
Propagation and purification of ADVG-VP2
particles.
ADVG-VP2 particles were produced at 28°C
in suspension cultures of Spodoptera frugiperda (Sf9) cells
singly infected at a multiplicity of 1 PFU/cell with the recombinant
baculovirus Autographa californica nuclear polyhedrosis
virus (AcNPv), encoding the structural protein VP2 of ADV
(26). The Sf9-infected cultures were harvested 72 h
after inoculation by centrifugation at 15,300 × g for
15 min at 4°C, using a JA-14 rotor (Beckman). The cell pellets were suspended in 50 mM Tris buffer (pH 8.0) containing 0.15 M NaCl, 0.2%
Triton X-100, and a cocktail of protease inhibitors (1 µg of pefabloc
SC/ml, 1 µg of pepstatin/ml, 1 µg of aprotonin/ml, and 5 µg of
leupeptin/ml). The suspension was subjected to four cycles of
freeze-thawing with liquid nitrogen and three cycles of sonication for
15 s on ice followed by centrifugation at 15,300 × g for 30 min at 4°C with a JA-14 rotor. The supernatant
was then clarified twice with an equal volume of chloroform and blended for 60 s at 4°C and sedimented by centrifugation at 15,300 × g for 30 min at 4°C, using a JA-14 rotor.
ADVG-VP2 particles were then precipitated by adding solid
polyethylene glycol 8000 (10% [wt/vol]) to the supernatant. After
overnight incubation at 4°C, the precipitate was collected by
centrifugation at 11,000 × g for 30 min at 4°C,
using a JA-14 rotor. The pellets were resuspended in 50 mM Tris buffer
(pH 8.0) containing 50 mM NaCl. The virus concentration was adjusted to
1 mg/ml, assuming an extinction coefficient of 1.0 mg/ml per cm at 280 nm.
Cryo-EM and 3D image reconstruction.
Small aliquots (3.5 µl) of the ADVG-VP2 sample were placed on holey
carbon-coated, copper grids, blotted with filter paper, and plunged
into liquid ethane to suspend the particles in a thin layer of vitreous
ice as described previously (2, 33, 42, 43). The grids were
inserted into a precooled, Gatan 626 cryotransfer holder (Gatan Inc.,
Warrendale, Pa.) that maintained a constant temperature of
186°C.
Preliminary images of frozen-hydrated ADVG-VP2 samples were
recorded with a CM120 electron microscope (Philips Electronic
Instruments, Mahwah, N.J.) and a 3D reconstruction was computed. The
initial orientation and origin parameters of the images for the
reconstruction were determined by a model-based refinement approach
(10) that used a 3D reconstruction of B19 (25) as
the initial model. Subsequent capsid samples were examined with a
Philips CM200 FEG transmission electron microscope, and images were
recorded with a Gatan 794 Multiscan charge-coupled device (CCD) camera.
The software used for automatically recording the images was the
Low-Dose plug-in (version 1.0) in Gatan's Digital Micrograph (version
2.5.9) program (43, 44). The size of the electron beam was
adjusted to fall just within the limits of the 1K2 CCD
detector (0.4 µm on the specimen) to allow images to be recorded without preirradiating adjacent regions (Fig.
1). A low-magnification (×4,560) survey
image was captured on the CCD, and 10 separate areas for
high-magnification imaging were identified and selected with a cursor
on a computer graphics screen (Fig. 1). The 10 images were then
automatically recorded at 200 kV, ×60,000 magnification (pixel size
corresponds to 4.0 Å at the specimen), 1.4 µm underfocus, and with a
dose of ~14.5 e
/Å2 per image
(43). Of the 106 individual particle images selected from
the CCD images, 87 were used to compute a 3D reconstruction to 22 Å resolution. The resolution was estimated according to established
procedures (9). The orientation and origin parameters for
each particle image were determined as described above with the
preliminary ADV reconstruction serving as the initial model (10). All calculated eigenvalues exceeded 10.0, which
indicated that random and unique data were used for each reconstruction (31).

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FIG. 1.
Micrograph of unstained ADVG-VP2 particles
suspended in a layer of vitreous ice over holes in a carbon support
film. (A) A low-magnification survey image of nine user-selected areas
(black open squares) over holes in the carbon support film and one in
the carbon film. (B) A portion of a 1K2 image recorded with
spot-scan procedures on a slow-scan CCD (43).
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A best fit between the ADVG-VP2 reconstruction (Fig.
2) and the atomic structure of the T=1
CPV particle (63) was achieved by comparing structure
factors computed from the reconstructed density map
(FcryoEM) at different map grid sizes with the
structure factors computed from the CPV model
(FCPV). Structure factors were calculated and
compared using the CCP4 software package (29). The best fit
was determined by adjusting the scale of the reconstruction to minimize
the R factor, calculated as (
|FCPV
FcryoEM|/
FCPV) × 100.

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FIG. 2.
Shaded-surface representations of the
ADVG-VP2 3D reconstruction viewed down a twofold
icosahedral axis (in stereo) (A), down a threefold axis (B), and down a
fivefold axis (C). The reconstruction was computed to 22 Å resolution
from 87 different ADVG-VP2 particle images.
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Alignment and modeling of ADVG-VP2 capsid
protein.
A modified version of the atomic structure of the CPV VP2
capsid protein was used as a template in the O program (38)
to produce a model ADVG-VP2 structure. The pairwise
alignment of the amino acid sequences of the ADV-G and CPV capsid
proteins (24) was modified (32) based on two
criteria, the molecular envelope of the cryo-EM reconstruction and the
secondary structural elements of CPV (Fig.
3). The best agreement between these
sequences occurred when eight additional peptides, IN1 to IN8, were
inserted into the CPV structure. An insertion peptide was defined here as being greater than two residues long (Table
1, Fig. 3).

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FIG. 3.
Sequence alignment of the VP2 capsid proteins of ADV-G,
ADV-Utah 1, and CPV. Arrowheads demarcate residues that consistently
differ between ADV-G and the pathogenic ADV strains. The ADV
hypervariable region is indicated by asterisks (*) under the
arrowheads. Boldface lettering is used to highlight completely
conserved residues. Colored lettering highlights residues that comprise
the -barrel structural motif (blue), insertions IN1-IN8 in the ADV
capsid protein (red), and insertions in the CPV capsid protein relative
to ADV (green). The sequence numberings are for ADV-G (top) and CPV
(bottom). The peptides (pVP2a-i) used in a nonoverlapping peptide
expression study (19) are indicated by bars with arrowheads
at each end above the capsid sequence and are colored. Orange, pVP2b;
green, pVP2c; dark blue, pVP2d; light blue, pVP2e; yellow, pVP2f; red,
pVP2; and black, pVP2a, pVP2h, and pVP2i.
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The secondary structures of the eight insertions in
ADVG-VP2 were predicted with the aid of the PredictProtein
server (56) and the BLAST network service (8). A
model of the ADVG-VP2 capsid was built and fitted
interactively into the ADVG-VP2 cryo-EM envelope by placing
the modified CPV VP2 atomic model into the cryo-EM density map, using
the O program (38). Seven insertions were modeled as a coil,
but IN6 was modeled as an
-helical segment because the BLAST results
indicated a strong correlation of the segment sequence with typical
-helical protein sequences (8). The O structural geometry
library was used to constrain all bond geometries during modeling. CPV
residues were mutated to the corresponding VP2 sequence for ADV-G in
the pseudoatomic model.
 |
RESULTS |
The 3D reconstruction of ADVG-VP2, computed to 22 Å resolution from images of vitrified particles, reveals a capsid
structure with mean external radii of 115, 136, and 132 Å at the
icosahedral twofold, threefold, and fivefold symmetry axes,
respectively (Fig. 2 and 4A). Several
surface features of ADVG-VP2 are similar to those found in
the VP2 capsid structures of CPV (Fig. 4B), FPV, MVM, and B19 (Fig.
4C). Prominent features include depressions ~15 Å deep and ~30 Å wide (dimples) at the icosahedral twofold axes, canyons ~15 Å deep
and ~15 Å wide around the fivefold axes, and protrusions (spikes) at
the threefold axes (Fig. 4). The spikes are not present in B19 (Fig.
4C), and they are more prominent in ADVG-VP2 (Fig. 4A) than
in CPV (Fig. 4B) or in FPV and MVM (not shown). The
ADVG-VP2 spikes are more prominent because each one
contains three mounds that lie 22 Å from the icosahedral threefold axes and extend to a maximum radius of 155 Å. Ridges separate the
dimples and canyons and appear to make these regions the least accessible areas on the ADV capsid surface (Fig. 4) in much the same
way as has been observed for CPV, FPV, MVM, and B19. Knobs of density
at the fivefold axes of ADVG-VP2 and B19 (Fig. 4A and C)
distinguish these viruses from CPV, FPV, and MVM, which have channels
formed by five symmetry-related
-ribbons that provide access to the
virus interior (Fig. 4B).

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FIG. 4.
Shaded-surface representations of ADVG-VP2
(A), CPV (B), and B19 (C), all viewed down a twofold icosahedral axis
of symmetry. Panels A and C show the 3D cryo-EM reconstruction of
ADVG-VP2 and B19 VP2 capsids (25) to 22 and 26 Å resolution, respectively, and panel B shows the atomic structure of
CPV (63), rendered at 21 Å resolution. Locations of some
two- (2), three- (3), and fivefold (5) icosahedral axes are
indicated.
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A pseudoatomic model of the ADVG-VP2 capsid was built based
on a modified alignment of the ADV-G and CPV VP2 capsid proteins. This
new alignment used the cryo-EM envelope of the ADVG-VP2
particle and the secondary structural elements of CPV as a guide. The
38% sequence identity of the modified alignment is slightly better than the 35% identity for the previously reported alignment
(24), and residues confined to the eight-stranded,
antiparallel,
-barrel motif show 63% identity (Fig. 3). The new
alignment incorporates eight insertions (labeled IN1 to IN8 in Fig. 3)
in the ADV-G VP2 sequence relative to that of CPV. These insertions,
which range from 4 to 17 amino acids long, all occur in the large loops
between the strands of the
-barrel.
The ADVG-VP2 model places the
-barrel domain in the same
position in the viral asymmetric unit as in the CPV capsid with the
eight insertions clustered in two regions on the external surface of
the capsid (Fig. 5). Insertions IN5 and
IN8 from one VP2 subunit (Fig. 5A) and IN3 from a twofold
symmetry-related subunit (Table 1, Fig. 3 and 5B) are clustered on the
surface ridge that separates the canyon and dimple depressions (Fig.
5B). These three insertions create a wider ridge in
ADVG-VP2 than in CPV and thereby result in a narrower
dimple in ADVG-VP2, as is also observed in B19 (Fig. 4).
Insertions IN1, IN2, IN4, and IN6 in one subunit (Fig. 5A), and IN7
from a threefold, symmetry-related subunit (Table 1, Fig. 3 and 5C)
interact to form the mounds adjacent to the threefold axes (Fig. 4A and
5C). Each mound, consisting of a total of 47 amino acids contributed by
the five insertion peptides, has no equivalent in the CPV structure
(Fig. 4A and B and 6).

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FIG. 5.
Ribbon drawings of the ADVG-VP2 pseudoatomic
model. (A) VP2 monomer, viewed down an icosahedral twofold axis. (B)
VP2 dimer, viewed as in panel A. (C) VP2 trimer, viewed down a
threefold axis. The blue and red colors identify, respectively, the
-barrel motif and the insertions (IN1 to IN8) relative to the CPV
capsid protein (Fig. 3). An icosahedral asymmetric unit (large open
triangle) includes the region bounded by one fivefold (filled pentagon)
and two threefold axes (filled triangles) separated by a twofold axes
(filled oval) in panels A and B. The yellow circle in panel C
highlights the clustering of insertion loops IN1, IN2, IN4, IN6, and
IN7, which form the mounds near the threefold axes. The figure was
generated with the program MOLSCRIPT (39).
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FIG. 6.
The pseudoatomic model of ADV-G VP2 fitted into the
cryo-EM reconstruction (gray isodensity contour). (A) Stereo diagram of
the mounds viewed parallel to an icosahedral twofold axis, showing the
right-hand-side trimer with the reference VP2 in blue and the
icosahedral threefold-related VP2s in red and green. Shown also is the
viral asymmetric unit depicted as an open triangle. (B) Close-up view
of panel A with inserted peptides IN1, IN2, IN4, IN6, and IN7 in ADV.
(C) Close-up view of the ADV mound density with superimposed CPV atomic
model, which has no equivalence structure to the inserted peptides in
ADV. This figure was generated with the program MacInPlot
(57).
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Comparison of the ADV-G VP2 sequence with the sequences of VP2 from ADV
strains that are pathogenic in mink, such as ADV-Utah 1, ADV-TR, and
ADV-Pullman, shows that strain-specific amino acids (Fig. 3) that occur
throughout the linear sequence (17) cluster at or near the
mounds and dimples (Fig. 7). More than
half (9 of 14) of the strain-specific amino acid differences (Fig. 3) occur on the capsid surface (Fig. 7). The hypervariable antigenic region of ADV (residues 232 to 241) (Fig. 3) is mostly exposed at the
mounds (Fig. 7), and residues implicated in tissue tropism and disease
pathogenicity (16, 17) occur near the threefold axes, in the
dimple, or on the wall of the dimple (Fig. 7).

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FIG. 7.
The locations of amino acids that differ between ADV-G
and pathogenic ADV strains (strain-specific amino acids), projected
onto a roadmap (23) representation of the residues on the
capsid surface of the ADVG-VP2 pseudoatomic model colored
according to radial distance (in angstroms) from the viral center. The
orientation is the same as in Fig. 5A and B. The asymmetric unit
contains contributions from several symmetry-related VP2 subunits. A
letter preceding the sequence number identifies a symmetry operation
used to generate the residue from the unlettered, reference VP2
subunit. G denotes a clockwise fivefold operation with respect to the
threefold axis at the bottom right of the diagram. The boundaries of
the projected surface-exposed amino acids are labeled according to
residue type and sequence number. Residues 84 and 236 differ only
between ADV-G and ADV-Utah 1.
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 |
DISCUSSION |
ADV pathogenesis dramatically differs from that of other
parvoviruses, such as CPV, MVM, and B19. Hence, an important issue is
the extent to which defined structural features in ADV and other
parvoviruses correlate with biological differences. The ADV-G VP2
sequence is 38% identical to CPV at the amino acid level and, at 22 Å resolution, the capsids of these viruses share features that might be
expected to coexist among members of the same virus family (Fig. 4A and
B). Similarities include the canyons that encircle the fivefold axes,
the dimples at each of the twofold axes, and spikes centered at each of
the threefold axes. However, three main features distinguish the
external surface structure of ADV and CPV: (i) the channels at the
fivefold axes in CPV appeared to be closed in ADV-G like B19 (Fig. 4A
and C); (ii) each ADV-G spike has three mounds (Fig. 4A); and (iii) the
ridges that separate dimples and canyons are wider in ADV-G (like B19)
than in CPV (Fig. 4).
Differences in postassembly processing of parvovirus VP2 subunits might
explain the closed channels in ADV and B19 (Fig. 4A and C). A third
capsid protein, VP3, is detected in the "rat-like" parvoviruses,
such as CPV, FPV, and MVM (59). It is formed by postassembly
cleavage of about 20 amino acids from the N terminus of VP2 in
DNA-containing virions but not in empty particles (28, 45, 60,
65). This cleavage does not occur in ADV or B19. Density present
in the fivefold channels of CPV (63, 70) and MVM
(3) capsids have been modeled as the glycine-rich,
N-terminal region of those VP2 subunits that become externalized and
accessible for cleavage to VP3. The absence of channels and of cleavage
in ADV and B19 is consistent with the notion that the N terminus of VP2
becomes exposed at the fivefold axes in the rat-like parvoviruses.
The spikes of ADVG-VP2 extend to a higher radius than the
pinwheel-like spikes of CPV, owing to the extra protrusions (mounds) on
ADV-G (Fig. 4A). The pseudoatomic model of the ADVG-VP2
structure predicted that each mound consisted of five short peptide
insertions in the flexible loops that make up the capsid surface
(including IN1, IN2, IN4, and IN6 from one VP2 polypeptide and IN7 from
a threefold-related VP2 molecule [Table 1 and Fig. 3 and 5]). The spikes of CPV and FPV, which contain sequences from loops 1, 2, 3, and
4 (5, 63), have been shown to be dominant, neutralizing antigenic regions (58). A hallmark of ADV infection is the
massive antibody response directed against the virus which enhances
disease severity. The atomic model of ADVG-VP2 provides a
useful means to relate antigenic features of the virion to the capsid
structure. Recent work, in which defined segments of
ADVG-VP2 (Fig. 3; pVP2a to pVP2i) were expressed as
nonoverlapping, maltose-binding fusion proteins, indicates that
specific regions of ADV-G are immunodominant (19). For
example, linear polypeptides that align with CPV surface loops 3 and 4 (pVP2e, pVP2f, and pVP2g from ADV-G) are highly immunoreactive
(19). Peptide pVP2d, which aligns with CPV loop 2 and
contains the ADV hypervariable region, is also involved in the
antigenic response and is thought to contain a strain-type specific
epitope (16, 19). The current alignment of the ADV-G and CPV
VP2 proteins based on sequence and structure show that the
nonoverlapping peptides pVP2d, pVP2e, pVP2f, and pVP2g contain, respectively, insertions IN2, IN3, IN4 and IN5, and IN6 and IN7 (Fig.
3). IN2, IN4, IN6, and IN7 comprise most of the mound density (Fig. 5).
A roadmap (23) that depicts the nonoverlapping peptide sequences (pVP2b-pVP2g) on the capsid surface of the
ADVG-VP2 model (Fig. 8)
confirms previous reports that the immunogenic linear peptides are
located on or near the icosahedral threefold axes, or on the surface
ridges that separate dimples and canyons (19). The most
immunogenic peptide is pVP2g, which is the most highly exposed region
of the capsid (Fig. 8). Hence, these observations suggest that the
insertions in ADV that form the mounds are important determinants of
capsid immunogenicity. It is noteworthy that parvoviruses CPV, FPV, and
B19, which can all be neutralized by a host-antibody response, lack the
ADV mounds (Fig. 4 and 6). The unusual pathogenicity of ADV might arise
if the mounds act as immunodominant decoys that somehow prevent a
protective response from being generated during infection.

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FIG. 8.
The locations of nonoverlapping ADV-G peptides,
pVP2b-pVP2g (Fig. 3), projected onto a roadmap (23)
representation of the residues on the capsid surface of the
ADVG-VP2 pseudoatomic model. The peptides are colored in
the same scheme as in Fig. 3. The view is the same as in Fig. 5A and B
and 7. Residue labeling is as explained in the legend for Fig. 7. A
denotes a twofold operation, G denotes a clockwise fivefold operation,
and I denotes a clockwise threefold operation with respect to the
threefold axis at the bottom right of the diagram.
|
|
Economic losses to the fur industry as a result of ADV infection of
farmed mink are mainly a consequence of the unusual pathogenicity of
ADV, in which infectivity is enhanced by capsid-antibody and capsid
protein fragment-antibody complexes (1, 50, 51) formed
during an infection. This property has thwarted numerous attempts at
particle-based vaccine development. Current strategies for global
development of vaccines against parvoviruses are focused on the use of
virus-like particles or peptides produced in heterologous systems,
since they form a cheap but safe alternative to the use of attenuated
or inactivated live-virus vaccines. Our cryo-EM study of the
baculovirus-expressed ADVG-VP2 capsids has led to a
structural model that provides plausible correlations between the
unusual antigenic properties of the virus and its capsid architecture. The model predicts that the mound features, comprised of inserted sequences relative to CPV and other parvoviruses that can be
neutralized in vivo, harbor immunodominant sites on the ADV capsid
surface. Thus, it may be possible to knock out dominant antigenic
regions without affecting particle formation. Loss of such dominant
antigenic regions could lead to recruitment of other minor antigenic
epitopes in recombinant capsids. If such epitopes elicit a
neutralization response, engineered viruses could function as effective
vaccine vehicles in vivo.
The nonoverlapping ADV-G peptides pVP2b, pVP2c, pVP2h, and pVP2i (Fig.
3) had very little or no reaction against serum from infected mink
(19), suggesting that these regions either contain conformational rather than linear epitopes or that they are not exposed
at the capsid surface (19). The pseudoatomic model of ADVG-VP2 predicts that some of the residues from these
nonreactive peptides are exposed at the capsid surface (Fig. 8). Thus,
lack of reactivity of the peptides may indicate that the epitopes are not linear or that exposed residues are inaccessible to antibodies. Antibody inaccessibility may explain the lack of reactivity of peptides
pVP2h and pVP2i, which have surface residues located in the canyons and
dimples, respectively. The dimple has been postulated as being involved
with receptor interactions, tissue tropism, and pathogenicity in
parvoviruses (3, 5, 13, 61). Human parvovirus B19
(25) and other viruses, such as rhinoviruses
(53), polioviruses (reviewed in reference
52), and influenza virus (66), have
receptor recognition sites that are surface depressions surrounded by
antigenic epitopes.
ADV residues which are implicated in tissue tropism in vitro and
pathogenicity in vivo, cluster on or near the mounds and dimples (Fig.
7) and exhibit considerable sequence variability between ADV-G and the
pathogenic strains of ADV (Fig. 3) (16, 17). Residues H92,
Q94, and Y115, near the threefold axes, are located in the same region
of the capsid as amino acid residues with analogous tissue tropism
functions in CPV and FPV (5, 22, 47). Residues H395 and N434
on the dimple wall are topologically similar to residues of CPV and
FPV, which determine differences in the interactions of these closely
homologous viruses with erythrocyte receptors during hemagglutination
(5, 13, 61). The residues in the dimple also have
topological locations similar to those which confer tissue tropism
differences between allotropic strains of MVM (3). Treatment
of host cells with neuraminidase abolishes CPV and FPV hemagglutination
(13, 61) and also MVM and ADV tissue infectivity (30,
34), suggesting that the dimple may be involved in recognition of
host cell factors with terminal sialic acid moieties. However, sialic
acid recognition appears not to be essential for CPV infection because,
although residues in the wall of the CPV dimple are implicated in
sialic acid recognition, CPV mutants which are unable to bind sialic
acid in a hemagglutination assay are still competent to infect canine
cells (13, 61). In contrast, for ADV and MVM, sialic acid
recognition is important for infectivity (30, 34) and
appears to be a prerequisite for successful host cell infection. In the
latter viruses, the dimple, which is implicated in sialic acid
recognition, is constricted compared to that in CPV (Fig. 4)
(3) as a result of insertion IN8 in ADV (Table 1, Fig. 5)
and a 5-amino-acid insertion in MVM VP2 relative to CPV VP2
(3). The proximity of these extra ADV and MVM residues to
others in the dimple that determine tissue tropism suggests that the
inserted sequences may be an adaptation which allows the viruses to
utilize the binding of cellular factors with terminal sialic acids for
productive host infection. It is of interest to note that in B19, the
dimple is also constricted compared to that in CPV and is thus more
like ADV (Fig. 4) as a result of an insertion analogous to the ADV IN8
in the B19 VP2 sequence (4, 24). However, while the
infectious receptor for B19 consists of terminal N-acetylated sugars,
sialic acid is not involved (21), and the receptor
recognition site for B19 has been identified as a depression on the
icosahedral threefold axis and not the twofold dimple (25).
In view of these contrasts, more detailed analysis of the ADV capsid
structure and additional mutational studies of ADV VP2 are needed to
pinpoint the host receptor recognition site and to discern the
mechanisms by which ADV recognizes host cells.
 |
ACKNOWLEDGMENTS |
This work was supported in part by University of Warwick Research
and Teaching Initiative grant 0952 to R.M., National Institutes of
Health grant GM33050 to T.S.B., and National Institutes of Health
Program Project grant AI35212 to the Purdue University Structural
Virology group.
We thank Colin R. Parrish for helpful discussions of the manuscript.
 |
FOOTNOTES |
*
Corresponding author. Present address: Department of
Biochemistry and Molecular Biology, Center for Structural Biology, The Brain Institute, College of Medicine, University of Florida, P.O. Box
100245, Gainesville, FL 32610-0245. Phone: (352)392-4304. Fax: (352)
392-3422. E-mail: mamckenna{at}ufl.edu.
Present address: Canadian Food Inspection Agency, National Centre
for Foreign Animal Disease, Winnipeg, Mannitoba R3E 3M4, Canada.
 |
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Journal of Virology, August 1999, p. 6882-6891, Vol. 73, No. 8
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