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Journal of Virology, June 1999, p. 4662-4669, Vol. 73, No. 6
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Novel Endogenous Type D Retroviral Particles
Expressed at High Levels in a SCID Mouse Thymic Lymphoma
Sika
Ristevski,1,*
Damian F. J.
Purcell,2
John
Marshall,3
Daniella
Campagna,2
Sara
Nouri,1
Simon P.
Fenton,2,4
Dale A.
McPhee,2 and
George
Kannourakis1,2,4,*
L.A.R.C.H. Cancer Research Unit, Royal Children's
Hospital, Parkville, Victoria 3052,1
AIDS Cellular Biology Unit, Macfarlane Burnet Centre for
Medical Research, Fairfield, Victoria 3078,2
Victorian Infectious Diseases Reference Laboratory, North
Melbourne, Victoria 3051,3 and Fiona
Elsey Cancer Research Laboratory, Cancer Research Centre,
University of Ballarat, St. John of God Hospital, Ballarat, Victoria
3350,4 Australia
Received 2 October 1998/Accepted 19 February 1999
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ABSTRACT |
A xenograft model of the human disease Langerhans cell
histiocytosis (LCH) was investigated with severe combined
immunodeficiency (SCID) mice. Transplantation of human LCH biopsy
material into SCID mice resulted in the generation of mouse tumors
resembling lymphomas. A thymoma cell line (ThyE1M6) was generated from
one of these mice and found to display significant levels of
Mg2+-dependent reverse transcriptase activity. Electron
microscopy revealed particles with type D retroviral morphology budding
from ThyE1M6 cells at a high frequency, whereas control cultures were negative. Reverse transcription-PCR of virion RNA with degenerate primers for conserved regions of various mouse, human, and primate retroviruses amplified novel sequences related to primate type D
retroviruses, murine intracisternal A particles, Jaagsiekte sheep
retrovirus, and murine long interspersed nuclear elements but not other
retroviral classes. We demonstrate that these sequences represent a
novel group of endogenous retroviruses expressed at low levels in mice
but expressed at high levels in the ThyE1M6 cell line. Furthermore, we
propose that the activation of endogenous retroviral elements may be
associated with a high incidence of thymomas in SCID mice.
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INTRODUCTION |
Langerhans cell histiocytosis (LCH)
is a human disease of unknown etiology characterized by the
accumulation of clonally derived Langerhans cells (65, 69).
In addition, there is an accumulation of inflammatory cells, including
T cells, macrophages, eosinophils, neutrophils, giant cells, and plasma
cells (24, 66). The clinical spectrum of the disease varies
and includes isolated, benign lesions of bone called eosinophilic
granuloma (33, 44), multifocal disease (32, 58),
and severe, life-threatening disseminated disease (7, 20, 28,
55).
A study of the etiology of LCH has been hindered by the limited
availability of disease material, particularly progressive disease
material. Consequently, sporadic biopsy samples are commonly used for
research, and progress in defining the mechanisms of pathogenesis is
complicated by the lack of consistent materials. In order to further
characterize LCH, we xenografted human LCH biopsy material into severe
combined immunodeficiency (SCID) mice with a view to observing the
induction of LCH-type pathogenesis. SCID mice lack the B and T
lymphocytes required for an immune response to allo- or xenografts
(5, 10, 11) and have been used to establish successful
long-term engraftment of human tissues (23, 46). A SCID
mouse injected with LCH biopsy material developed a lymphoma. A cell
line, ThyE1M6, was established from this lymphoma. Subsequent passage
of this cell line in SCID mice resulted in disseminated cellular
infiltrates distinct from lymphoma but similar to the multifocal LCH
observed in human patients.
Here we examine the ThyE1M6 cell line and consider the possibility that
xenotransplantation of human LCH tissue transmitted the LCH disease
phenotype from humans to mice. During our analysis, we observed novel
viral particles, resembling the type D retroviruses of primates,
budding from the ThyE1M6 cell line. Since there are no type D
retroviruses yet characterized from mice and many enigmatic accounts of
type D retroviruses from human tumor cell lines (2, 16, 27, 41,
48, 64) and an immunocompromised patient (4), we
characterized these particles at the molecular level.
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MATERIALS AND METHODS |
Xenografting of SCID mice.
Six- to 8-week-old female SCID
mice of the original C.B-17 strain background were used in all
experiments. A thymus biopsy sample from a 13-year-old female patient
diagnosed with LCH (LCH patient B) was teased into a single-cell
suspension and continuously cultured in the presence of 25 ng of the
inflammatory cytokines tumor necrosis factor alpha and
granulocyte-macrophage colony-stimulating factor (Boehringer Mannheim
Biochemica, Mannheim, Germany) per ml for 35 days. Live cells were
purified on a Ficoll gradient, and 6.7 × 104 cells in
saline containing tumor necrosis factor alpha and
granulocyte-macrophage colony-stimulating factor were injected
subcutaneously into each of three SCID mice. Cytokine injections were
repeated daily for 5 days only. Three additional SCID mice were
injected with cytokines only as a control. Organs were harvested from
the mice after 9 weeks for histopathologic examination. One of the
xenotransplanted mice developed a thymic mass, with widespread
involvement of lymphomatous infiltrates of liver, spleen, lymph nodes,
lungs, and bone marrow. The lymphoid cells from the enlarged thymus
were placed into a culture, and a nonclonal cell line, ThyE1M6, was
obtained. A different xenotransplanted mouse developed an ovarian tumor
with the histological appearance of a lymphoma.
Cell cultures.
All cells were grown in Iscove's modified
Dulbecco's medium (Gibco BRL, Gaithersburg, Md.) supplemented with
10% fetal calf serum (Gibco BRL) at 37°C. Biopsy samples derived
from two patients diagnosed with LCH were cultured to establish the
cell lines LCH A and LCH B used in this study. A control cell line,
STh1a, from a spontaneous thymoma from an aging SCID mouse was cultured
and cloned twice in agar (cell line kindly provided by Ian Radford, Peter McCallum Cancer Institute, Melbourne, Victoria, Australia). The
Ann-1 cell line (9) is chronically infected with Abelson murine leukemia virus (A-MuLV) and Moloney murine leukemia virus (Mo-MuLV) and was used as a type C retrovirus control. The
MiCl1 (S+ L
) mink (Mustela
vison) lung cell line (infected with Moloney murine sarcoma virus)
was grown in RPMI medium (Gibco BRL) supplemented with 10% fetal calf serum.
FACS analysis of the ThyE1M6 cell line.
The surface antigen
phenotype of ThyE1M6 cells was determined by staining with monoclonal
antibodies to murine antigens CD4, CD8, H2b, Ly-2, Thy-1, F4/80, N418,
Mac-1, and NLDC145 as well as to several human leukocyte antigens
(including CD4, CD8, CD45, CD19, and CD14) (all listed antibodies were
supplied by Becton Dickinson/Pharminogen, San Jose, Calif.).
Fluorescence-activated cell sorter (FACS) analysis was performed with a
FACStar II apparatus (Becton Dickinson Immunocytometry Systems, San
Jose, Calif.).
PERT assay.
Culture supernatants from ThyE1M6 cells were
centrifuged at 16,000 × g for 10 min to remove
cellular debris and then were filtered through a 0.2-µm-pore-size
filter (Millipore, Bedford, Mass.). Virions were pelleted from 5 ml by
ultracentrifugation in an SW56.1 rotor (Beckman, Fullerton, Calif.) at
70,000 × g for 90 min. The pellet was resuspended in
30 µl of lysis buffer, consisting of 100 mM KCl, 25 mM Tris-HCl
(7.8), 10 mM dithiothreitol, 0.25 mM EDTA, 0.6% Triton X-100, and 50%
glycerol. Viral reverse transcriptase (RT) activity was assayed by the
ability to generate cDNA from an MS-2 phage RNA template primed with an
MS-2-specific primer. A 112-bp portion of the MS-2 cDNA was amplified
by PCR (25 cycles of 1 min at 94°C, 1 min at 55°C, and 1 min at
72°C), quantified by Southern blot hybridization with 5 ng of
biotinylated RT-3 (59), an internal MS-2-specific probe, and
then a streptavidin-horseradish peroxidase conjugate (DAKO,
Carpinteria, Calif.), and detected with chemiluminescence (ECL kit;
Amersham, Buckinghamshire, England). In addition to being assayed by
the highly sensitive PCR-enhanced RT (PERT) assay, RT activity was
assayed by measuring the incorporation of [32P]TTP with
an oligo(dT) · poly(rA) template in the presence of 0.6 mM
Mn2+ or 5 mM Mg2+ as the divalent cation as
previously described (43, 53).
Electron microscopy.
Pellets of ThyE1M6 cells were fixed
with glutaraldehyde and osmium tetroxide and analyzed by transmission
electron microscopy as described by Lee et al. (30).
Virion RNA and cDNA preparation.
Virions were pelleted from
180 ml of supernatant from early passages of ThyE1M6 cells by
ultracentrifugation for 1 h at 100,000 × g in an
SW28 rotor (Beckman, Buckinghamshire, England). The RNA was extracted
from the pellet by the method of Chomczynski and Sacchi (6).
First-strand cDNA was prepared from viral RNA by use of 2 U of avian
myeloblastosis virus RT (Boehringer) per µl in the supplied buffer,
which was supplemented with 1 U of RNasin (Promega, Madison, Wis.) per
µl, 5 pmol of random hexamers (Promega) per µl, and 1 mM
deoxynucleoside triphosphate (dNTP) mix (Gibco BRL); the mixture was
incubated at 42°C for 1 h, and inactivated at 70°C for 5 min.
Degenerate PCR of novel retroviral sequences.
Degenerate
primers for the human retroviruses human immunodeficiency virus type 1 (HIV-1) (45) and human T-cell leukemia virus (HTLV) type 1 (HTLV-1) (29) and for human (56) and mouse (51) type C retroviruses were used for PCR. In addition,
primers for amplifying all existing type D viruses were identified from multiple alignments of simian retrovirus (SRV) type 1 (SRV-1) and type
2 (SRV-2), Mason-Pfizer monkey virus (MPMV), and squirrel monkey
retrovirus (SMRV). Conserved regions were used to design degenerate
type D virus PCR primers for gag [gag1, 5'
AGGGGCCAGCCCCAGG(C/G)CCC; gag2, 5' GAGGTCCA(A/G)TCCTGCACT]
and pro (pro1, 5'
GG(A/C)AGTGCAGGA(T/C)TGGACCTC(T/A)GT; pro2, 5'
AGT(A/GA/G)CATC(A/T/G)GC(T/C)CC(C/A/T)GTATC], which were used to
amplify the respective genes from the viral cDNA; nucleotides in
parentheses represent alternative nucleotides incorporated during
oligonucleotide synthesis to account for sequence variations at these
positions. The predicted PCR product sizes for the gag1-gag2 primer
pair are 119 bp for SRV-1, SRV-2, and MPMV and 157 bp for SMRV. The
predicted PCR product size for the pro1-pro2 primer pair is 443 bp. The
PCR products generated with the gag1-pro2 primer pair are 544 bp for
SRV1, SRV2, and MPMV and 583 bp for SMRV. Hot-start PCR amplification
was performed with Taq DNA polymerase (Perkin-Elmer/Roche,
Branchburg, N.J.) in a 1.5 mM Mg2+ reaction buffer with 25 pmol of each primer. Forty amplification cycles at 94°C for 1 min,
45°C for 1 min, and 72°C for 1 min and a final extension at 72°C
for 7 min were performed with a Perkin-Elmer 9600 Thermocycler. PCR
products were subsequently treated with 1.25 U of Pfu
polymerase (Stratagene, La Jolla, Calif.) per reaction for 30 min at
72°C to create blunt ends, gel purified, and ligated into pCR-Script
[Stratagene pCR-Script SK(+) cloning kit] according to the
manufacturer's instructions.
Plasmid sequencing.
Plasmid sequencing was performed by use
of an ABI Prism Dye Terminator Cycle Sequencing Ready Reaction Kit with
Amplitaq DNA polymerase, and sequences were analyzed by use of an
Applied Biosystems 373 DNA sequencer (Perkin-Elmer/Applied Biosystems).
Southern analysis.
Genomic DNA was prepared from cultured
cells and mouse tissues by the methods of Maniatis et al.
(37) and digested with Boehringer restriction enzymes.
Digestion products were separated on a 1% agarose-Tris-acetate gel
and transferred to a Hybond N+ nylon membrane (Amersham) in
0.4 M NaOH. The membrane was prehybridized with 1 M NaCl-10% dextran
sulfate-1% sodium dodecyl sulfate (SDS)-100 µg of salmon sperm DNA
per ml for 1 h at 42°C and then hybridized overnight under the
same conditions with a degenerate gag-pro PCR product
labeled by four extra cycles of PCR with [
-32P]dCTP.
The membrane was washed at 65°C under the following conditions: once
in 2× SSC (1× SSC is 0.15 M NaCl plus 0.015 M sodium citrate) for 30 min, once in 1× SSC for 30 min, and once in 0.2× SSC for 30 min; the
membrane was then exposed to Kodak X-Omat film.
Northern analysis.
Total cellular RNA was extracted from
cell culture pellets by the method of Chomczynski and Sacchi
(6). Ten micrograms of each sample was loaded onto a 1.6%
agarose-formamide gel as described by Maniatis et al. (37)
and, following separation, RNA was transferred to a Hybond
N+ membrane in 10× SSC. The membrane was prehybridized at
65°C for 30 min with 0.5 M sodium phosphate buffer (pH 7.0)-1 mM
EDTA-0.1% bovine serum albumin-7% SDS and then hybridized overnight
under the same conditions with a degenerate gag-pro PCR
product labeled by four extra cycles of PCR with
[
-32P]dCTP. The membrane was washed twice for 30 min
each time at 65°C in 40 mM sodium phosphate (pH 7.0)-1 mM EDTA-1%
SDS and exposed to Kodak X-Omat film.
 |
RESULTS |
Generation of a murine thymocytic lymphoma cell line, ThyE1M6, from
SCID mice.
A thymic mass removed at biopsy from a human patient
with LCH was continuously cultured in the presence of TNF-
and
GM-CSF and, after 35 days, was injected subcutaneously into SCID mice. Two of three mice injected with the cultured cells developed a lymphoma, whereas mice receiving only cytokines were normal. The role
that the injection of LCH biopsy material played in the induction of
these tumors is unclear. A cell line, ThyE1M6, was generated from one
of these mice. Immunophenotyping of the ThyE1M6 cell line demonstrated
that it was a mouse-derived pre-T-lymphocyte thymoma bearing murine
CD4inter and CD8hi surface markers and showing
low expression of the F4/80low antigen (Fig.
1). Antibodies to mouse dendritic cells
(NLDC145; major histocompatibility complex class II) and macrophages
(Mac-1) (Fig. 1) and to human antigens (CD4, CD8, CD45, CD19, CD14)
(data not shown) were negative. The first passage of the ThyE1M6 cell line into SCID mice resulted in inflammatory infiltrates in the liver,
spleen, bone marrow, intestines, and mesenteric rudimentary lymph nodes
and at the site of injection. Histopathologic examination of the
infiltrated tissues demonstrated the presence of cell types associated
with LCH, such as granulocytes, eosinophils, macrophages, giant cells,
mast cells, and lymphocyte-like cells (data not shown).

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FIG. 1.
FACS analysis of the ThyE1M6 cell line. The shaded area
represents the test antibody, and the dotted line represents the
isotype-matched negative control. MHC, major histocompatibility
complex; FITC, fluorescein isothiocyanate; PE, phycoerythrin; APC,
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The ThyE1M6 cell line has a high level of
Mg2+-dependent RT activity.
The ThyE1M6 cell line was
tested for RT activity with the PERT assay (52). Cell
culture supernatants were harvested from the ThyE1M6 cell line and a
virus-infected control cell line, Ann-1, an A-MuLV-transformed NIH 3T3
clone superinfected with cloned Mo-MuLV (9). After
ultracentrifugation to concentrate virus particles, pellets were tested
for RT activity with the PERT assay, as shown in Fig.
2A. In this assay, the presence of RT
enzyme is detected by PCR amplification of cDNA reverse transcribed from an MS-2 RNA template. The expected 112-bp PCR product was obtained
from both the ThyE1M6 and the Ann-1 cell supernatants but not from
supernatants from cultured LCH biopsy material or from human
osteosarcoma, rhabdomyosarcoma, and retinoblastoma primary cultures.
Furthermore, there was an increase in RT activity with continuous
culturing (3 to 144 h) of the ThyE1M6 cell line, suggesting an
accumulation of viral particles with culturing (Fig. 2A). Since the
cell culture supernatant derived from LCH B (which was used in the
genesis of the ThyE1M6 cell line) (Fig. 2A, lanes 14 to 18) was
negative, it is unlikely that the particle-associated RT activity was
transmitted from the biopsy material to SCID mice. Since the PERT assay
is a highly sensitive, nonquantitative PCR-based method, we carried out
RT assays which involved measuring the incorporation of
[32P]TTP with an oligo(dT) · poly(rA) template in
the presence of either Mn2+ or Mg2+ as the
divalent cation to confirm the presence of RT activity in ThyE1M6
cells, as shown in Fig. 2B. This assay confirmed RT activity with a
preference for Mg2+, which is commonly associated with the
retroviruses of primates, whereas most murine type C viruses have a
preference for Mn2+ (61).

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FIG. 2.
RT activity in the ThyE1M6 cell line culture
supernatant, as demonstrated by the PERT assay. In all cases, culture
supernatants were used to prepare concentrated extracts used in the
PERT assay. Lanes 1 and 23 are blank (H2O) PCR controls,
lanes 19 and 26 are culture medium controls, lane 24 represents RT from
the positive control Ann-1, and lanes 2 and 25 represent RT activity
detected in supernatant preparations from confluent ThyE1M6 cells.
Lanes 3 to 8 represent LCH A, and lanes 14 to 18 represent LCH B. Lanes
9 to 13 represent an RT activity time course for ThyE1M6 cells in which
the supernatant was removed after 3, 24, 48, 120, and 144 h of
continuous cell culturing and virion preparations were assayed for RT
activity. Lanes 4 to 8 and 14 to 18 represent equivalent time courses
for LCH A and LCH B, respectively. Lane 3 represents a confluent
culture of the LCH A cell line. Human osteosarcoma, rhabdomyosarcoma,
and retinoblastoma cell lines are represented in lanes 20 to 22, respectively. (B) RT activity in the ThyE1M6 cell culture supernatant,
as determined by measurement of [32P]TTP incorporation
with an oligo(dT) · poly(rA) template in the presence of either
Mg2+ or Mn2+ as the divalent cation. HIV type 1 (HIV-1) and HTLV-1 supernatants were used for comparison. A background
value was determined and was subtracted to give the values shown.
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Electron microscopic analysis reveals a high frequency of budding
type D retrovirus particles.
We carried out electron microscopy of
the ThyE1M6, Ann-1, and STh1a (a SCID-derived spontaneous thymoma) cell
lines, spleen and bone marrow derived from normal SCID mice, skin
biopsy material from LCH patient B, and cultured thymus cells from LCH
patient B. We were able to detect budding and mature virus particles
with different morphologies and frequencies from all three cell lines, but no particles were observed from the mouse or human tissues (Fig.
3 and Table
1). Novel particles were evident from the
ThyE1M6 cell line and would best be classified as type D retrovirus
like on the basis of their size and rod-like core morphology
(17); however, unlike the results for simian type D
retroviruses, no intracellular precursor particles were observed. The
ThyE1M6 particles were observed at a frequency of 1 per 24 sectioned
cells examined, formed at the plasma membrane, and were round or ovoid,
with a tubular core. Two matrix layers (shells) surrounded the core, a
thin inner layer, and a thicker outer layer. The frequency of these
particles decreased with increasing passage number. The particles
observed from the STh1a thymoma cell line that spontaneously arose in
SCID mice would also best be classified as type D retrovirus like.
Compared to the ThyE1M6 particles, the STh1a particles had similar
dimensions and morphology, including the presence of two matrix layers,
although core structures could not be discerned. Therefore, the type D
virus observed in the ThyE1M6 cell line was morphologically similar to
but distinct from the virus observed in the STh1a cell line. As
expected, type C retrovirus-like particles were observed budding from
Ann-1 (infected with A-MuLV and Mo-MuLV), and these virions were
clearly distinguishable from the particles budding from the SCID
thymoma cell lines. Compared to the type C retrovirus-like Ann-1
particles, the type D retrovirus-like ThyE1M6 and STh1a particles were
larger and had an additional matrix layer surrounding the core (Fig. 3
and Table 1).

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FIG. 3.
Electron microscopy analysis of virus particles produced
by ThyE1M6, STh1a, and Ann-1 cell lines. Mature type D retrovirus
particles were produced by ThyE1M6 cells (a) and by STh1a cells (b).
Mature type C retrovirus particles were produced by Ann-1 cells (c).
Bar, 100 nm.
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We were unable to detect mature virus particles in SCID mouse spleen or
bone marrow samples. We cannot exclude the possibility
that these
particles are present at a frequency too low for detection
by electron
microscopy. Low-level RT activity from cultured SCID
spleen and bone
marrow in the PERT assay would support the presence
of infrequent
particles (data not shown). In addition, we were
unable to detect
mature virus particles in LCH patient B skin
biopsy material or in
cells cultured from a thymic mass from this
patient. The LCH B cell
line was also negative for RT activity,
as determined by the PERT assay
(Fig.
2A, lanes 14 to 18). Therefore,
it is likely that the novel type
D retrovirus particles are associated
with a SCID mouse-derived
thymocytic lymphoma, and we were interested
in testing the possibility
that these particles were of endogenous
origin.
Degenerate PCR of virus preparations from ThyE1M6 cells reveals the
expression of novel type D retrovirus sequences.
In order to
identify the type D particles produced by the ThyE1M6 cell line at the
molecular level, we carried out degenerate PCR cloning. Since type D
virus morphology and a preference for Mg2+-dependent RT
activity were observed, we designed PCR primers for highly conserved
sequences of SRV-1, SRV-2, MPMV, and SMRV. Primers were designed for
several regions, including the gag and pro genes,
and were used to yield three overlapping PCR products of the predicted
sizes. A gag region product of 119 bp, a pro region product of 443 bp, and a continuous gag-pro product
of 544 bp were observed. Particles were pelleted from ThyE1M6 and STh1a
cell culture supernatants. RNA was extracted from virions, reverse
transcribed to cDNA, and subjected to PCR with the gag, pro, and gag-pro primer pairs. Bands of the
predicted sizes were observed in both ThyE1M6 and STh1a samples, as
shown in Fig. 4. All PCR products were
cloned, sequenced, and summarized according to their sequence
similarities (Table 2). These results
showed that the PCR products contained several groups of novel
sequences related to the simian type D retroviruses, murine
intracisternal alpha-particle elements (IAPE) (1, 28, 36,
42), Jaagsiekte sheep retrovirus (JSRV) (67, 68), and
murine long interspersed nuclear elements (LINE) (14). A
number of sequence variants were identified in both ThyE1M6 and STh1a
samples: those related to type D simian retroviruses (represented by
clones 3.12, 3.21, 3.23, and 2.53) and those related to the IAPE
(represented by clones 2.27 and 2.29). Each of these sequences was
found to be present in both the ThyE1M6 and the STh1a cell lines.

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FIG. 4.
RT-PCR cloning of the gag-pro genes of type D
retrovirus expressed by the ThyE1M6 and STh1a cell lines. Lanes 1 and
8, molecular size markers (100-bp ladder); lanes 2 to 4, gag, pro, and gag-pro PCR products,
respectively, derived from the virus from ThyE1M6 cells; lanes 5 to 7, gag, pro, and gag-pro PCR products,
respectively, derived from the virus from STh1a cells. The predicted
sizes were 119 bp for gag, 443 bp for pro, and
544 bp for gag-pro. The primers used to amplify these
sequences are indicated at the bottom of the figure.
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A number of other PCR primers were designed for characterized
retroviral sequences, such as MPMV
gag, MPMV
env,
degenerate
SRV
env, degenerate SRV
pol, HTLV-1,
murine leukemia virus, type
C virus
pol, degenerate
pol, VL30, MLV
env, and primate foamy
virus.
However, these primers did not generate PCR products of
the expected
sizes relative to the known retroviruses (data not
shown).
The type D retrovirus-related genes are endogenous genetic elements
expressed in mice.
In order to investigate if the viral sequence
elements that we identified by PCR were derived from endogenous mouse
sequences, Southern blot analysis was performed. The type D
retrovirus-related sequence gag-pro product (generated by
degenerate PCR from a ThyE1M6 cell culture supernatant [Fig. 4]) was
used to screen a panel of mouse-derived genomic DNAs from ThyE1M6
cells, STh1a cells, SCID mice, and Mus dunni mice and is
shown in Fig. 5. A band of approximately
1.7 kb and two less prominent bands of approximately 2 and 3 kb were
seen in all mouse-derived genomic DNAs digested with
HindIII, including that from the wild mouse M. dunni. No cross-hybridizing bands of any size were detected in
rat, hamster (CHO cells), human (HeLa cells and LCH patient tissues),
and mink (MiCl1 [S+ L
]) genomic
DNAs (data not shown). Therefore, the gag-pro PCR product was likely to have been derived from RNA expressed from an endogenous mouse element that is widespread across strains.

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FIG. 5.
Southern analysis of mouse-derived genomic DNAs
extracted from ThyE1M6 and STh1a cells and from SCID mouse and M. dunni tissues and probed with gag-pro. Restriction
endonuclease digests with EcoRI (E), BamHI (B),
and HindIII (H) are shown. A prominent band of
approximately 1.7 kb and two less prominent bands of approximately 2 and 3 kb were present in all samples digested with
HindIII.
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The endogenous murine type D retrovirus-related elements are
expressed as large RNA molecules.
The gag-pro PCR
product amplified from ThyE1M6 cDNA was radiolabelled and used as a
probe in Northern blot experiments. Total RNAs from ThyE1M6, NIH 3T3,
and M. dunni cell cultures were tested, and a band of
approximately 8.5 kb was observed in the mouse-derived cells, with the
highest abundance in the ThyE1M6 cell line (in which several bands were
observed) (Fig. 6). No
gag-pro-hybridizing bands were observed in normal human, LCH
patient, and rat RNA samples (data not shown). Thus, the type D
retrovirus-related endogenous elements are abundantly expressed as
large RNA molecules that may represent a complete viral genome. This
type D retrovirus-related genome may account for the type D retrovirus
particles observed budding from the SCID-derived cell lines ThyE1M6 and
STh1a.

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FIG. 6.
Northern analysis of total cellular RNAs extracted from
the mouse-derived cell lines ThyE1M6, NIH 3T3, and M. dunni.
A band of approximately 8.5 kb was detected in all cells when probed
with the ThyE1M6 gag-pro PCR products.
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DISCUSSION |
In this study, during the process of attempting to establish a
xenograft model for the human disease LCH in SCID mice, a thymocytic lymphoma cell line, ThyE1M6, was generated. The ThyE1M6 cell line was
shown to be of mouse origin and to express budding type D retrovirus
particles containing RT activity. Degenerate PCR amplification and
sequencing of the predominant encapsidated viral RNAs demonstrated a
significant relationship of most PCR products to the type D retroviruses at the level of gene sequence and arrangement as well as
homology to IAPE, LINE, and JSRV sequences. We have shown by
hybridization analysis that the genome for these viral RNAs contains
endogenous elements common to all murine strains, including the wild
mouse M. dunni.
Further analysis of the full genome sequence of the virus from ThyE1M6
cells will be required to clarify whether LCH patient cells have
contributed any sequences to the newly identified mouse type D
retrovirus. The data presented here do not support genetic recombination with human LCH-derived genetic elements contributing to
the gag-pro region of the novel virus but do support the
activation of a novel endogenous mouse retrovirus. Human DNA, including
LCH patient DNA, does not contain type D virus
gag-pro-related sequences; furthermore, human tissues were
also negative for RT activity. However, it will be interesting to
address this question with further analysis of the viral genome.
The type D class of SRVs has been extensively characterized. These
viruses were initially identified in studies of simian acquired
immunodeficiency syndrome (38, 39, 49, 59, 62). In addition,
type D retrovirus particles have been observed in a variety of
transformed human cell lines (2, 16, 27, 41, 48, 64). These
are presumed to be a culture contaminant (2, 48), although
the activation of endogenous elements has not been ruled out.
Furthermore, type D retrovirus particles have been observed in the
serum of a human AIDS patient (4). A novel exogenous
sequence related to type B and type D retroviruses has been identified
in patients with the autoimmune condition Sjogren's syndrome
(19). In addition, the suspected etiological agent of ovine
pulmonary carcinoma, JSRV, is an exogenous and endogenous type D and
type B retrovirus of the ovine and caprine species (47, 67,
68). It has been speculated that JSRV may be a helper virus for
an oncogenic replication-defective retrovirus, although this hypothesis
is difficult to test, since JSRV cannot be grown in vitro. To our
knowledge, this is the first report of the observation in mice of type
D retrovirus particles, which are present as endogenous elements and
are active in a mouse-derived thymocytic lymphoma.
The expression of type D retrovirus particles may be a common feature
of SCID mouse-derived thymocytic lymphoma, and we speculate whether it
is associated with the generation of lymphoma in the SCID mouse genetic
background. SCID mice are susceptible to spontaneous thymoma, the
incidence of which can be significantly increased by breeding with
strains such as the NOD (nonobese diabetic) mouse strain, which is not
usually susceptible to spontaneous thymoma. However, SCID/NOD mice have
a 67% incidence compared to a 15 to 20% incidence for mice with the
original SCID mutation background (C.B-17) (50).
Differential endogenous proviral genes often account for
strain-specific susceptibility or resistance to spontaneous lymphomagenesis; for SCID/NOD mice, thymomagenesis was associated with
the expression of a NOD mouse-unique endogenous ecotropic murine
leukemia provirus locus (Emv-30) (50). Recombination between
an ecotropic virus and one or more endogenous nonecotropic proviral
sequences is likely a causative agent for the high incidence of
spontaneous lymphoma in strains such as AKR/J (8, 13, 18, 21, 35,
60).
Molecular genetic analysis indicates a strong association between a
high spontaneous incidence of hemopoietic neoplasms and the activation
of endogenous murine leukemia viruses. This hypothesis is supported by
cross-strain breeding experiments (such as those with SCID/NOD mice),
in which murine strains carrying different endogenous elements are
brought together in one genome, facilitating potential cross-activation
and recombination.
It has been demonstrated that the DNA-dependent kinase (p350) gene is
the candidate gene for the SCID phenotype, resulting in an impairment
of the double-strand break recombination repair pathway (15,
26). Therefore, in addition to a deficiency in B and T
lymphocytes, SCID mice are highly susceptible to DNA damage, as
demonstrated by hypersensitivity to ionizing radiation (3, 34). This impairment confers a high potential for mutagenesis, genomic instability, and tumorigenesis and may be linked to the occurrence of spontaneous thymomas in SCID mice. Therefore, there may
be an increased susceptibility to retroviral activation in these mice.
The homology observed between the virus from ThyE1M6 cells and LINE is
intriguing in the context of recent reports of the FHIT
gene. It has been demonstrated that the human FHIT gene
encompasses the common human fragile site FRA3B and is often
inactivated or deleted in tumor cells (57). FRA3B
contains a high incidence of LINE insertions (22). LINE are
capable of retrotransposition (54) and have been shown to be
involved in the insertional mutation of a number of genes (12, 25,
40, 63). It has been proposed that carcinogen damage to DNA
results in rearrangement of the FHIT gene by homologous
recombination with LINE sequences. FHIT functions as a tumor
suppressor and thus may act early in tumor development. The induced
expression of LINE sequences may lead to increased recombination across
the SCID mouse genome and may be an early event leading to the
generation of thymomas.
We have identified a novel endogenous type D retrovirus of mice which
is expressed at high levels by the ThyE1M6 cell line. The results
presented in this paper suggest that the activation of this endogenous
virus might have been associated with the genesis of a thymocytic
lymphoma in a SCID mouse. It will be interesting to determine whether
the virus identified here is involved in the pathogenesis of
spontaneous thymomas in other SCID mice. We aim to further characterize
this endogenous murine retrovirus by cloning and sequencing of the full
viral genome.
 |
ACKNOWLEDGMENTS |
We thank Wendy Cook for the Ann-1 cell line and Ian Radford for
the STh1a cell line. We thank Len C. Harrison and Kaku Nakagawa for
helpful discussions and Ken Shortman and Frank Battey for FACS analysis
of the ThyE1M6 cell line. We thank Thulasi Murughiah, Rodney Daly,
Soong Ling, and Thuy Diem for excellent assistance with SCID mice,
animal experimentation, and technical assistance and Anthea Ramos for
technical assistance.
D.F.J.P. was supported by the NHMRC of Australia and by Macfarlane
Burnet Centre for Medical Research funds. This work was supported by
grants to G.K. from the Histiocytosis Association of America, the NHMRC
of Australia, CICA (Ballarat, Victoria, Australia), and St. John of God
Hospital (Ballarat, Victoria, Australia).
 |
FOOTNOTES |
*
Corresponding author. Present address for Sika
Ristevski: Institute of Reproduction and Development, Monash Medical
Centre, Clayton Rd., Clayton, Victoria 3168, Australia. Phone:
61-3-9594 7225. Fax: 61-3-9594 7211. E-mail:
sika.ristevski{at}med.monash.edu.au. Mailing address
for George Kannourakis: Fiona Elsey Cancer Research Laboratory, Cancer
Research Centre, University of Ballarat, St. John of God Hospital, 1002 Mair St., Ballarat, Victoria 3350, Australia. Phone: 61-353-334 811. Fax: 61-353-334 813. E-mail: g.kannour{at}ballarat.edu.au.
 |
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Journal of Virology, June 1999, p. 4662-4669, Vol. 73, No. 6
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
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