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Journal of Virology, March 1999, p. 2469-2480, Vol. 73, No. 3
Department of Microbiology, University of
Alabama at Birmingham, Birmingham, Alabama 35294
Received 10 August 1998/Accepted 9 December 1998
Mutations were introduced into the ectodomain of the human
immunodeficiency virus type 1 (HIV-1) transmembrane envelope
glycoprotein, gp41, within a region immediately adjacent to the
membrane-spanning domain. This region, which is predicted to form an
The process of viral entry is a key
step in the initiation of human immunodeficiency virus type 1 (HIV-1)
infection. Attachment of the HIV-1 virion to the target cell is
mediated by binding of the viral envelope glycoprotein complex to the
CD4 receptor on the cell surface (reviewed in reference
49). The envelope glycoprotein (Env) is processed
from an oligomeric precursor protein, gp160, into two noncovalently
linked subunits: the surface subunit, gp120, which is responsible for
binding to CD4, and the transmembrane subunit, gp41, which initiates
membrane fusion. In addition to CD4, HIV-1 has also been shown to
require an interaction between gp120 and a coreceptor, members of a
family of seven-transmembrane G protein-coupled chemokine receptors, on
the cell surface in order to mediate membrane fusion (18).
Many viruses, such as the influenza virus, are endocytosed following
binding to their receptor (35). Their viral glycoproteins
then undergo a pH-activated conformational change to a fusion-competent
form in the acidic environment of the endosome (13, 23).
HIV, however, fuses directly with the plasma membrane at the surface of
the target cell in a pH-independent manner (37, 38, 53). In
the case of HIV, it has been shown that binding to CD4 induces
conformational changes in gp120 and increases the exposure of gp41
epitopes independent of gp120 dissociation (48, 50, 51).
Thus, it has been proposed that the envelope glycoprotein of HIV
undergoes receptor-induced fusion activation analogous to the
pH-induced activation of other viral glycoproteins.
The amino-terminal fusion peptide of gp41 was originally identified by
its similarity to functional domains of paramyxovirus glycoproteins
(22) and has since been extensively characterized through
mutagenesis as the primary fusion domain (3, 19, 52). Based
on analogy to similar rearrangements in the glycoproteins of influenza
virus (13) and Rous sarcoma virus (24, 27), the
CD4-induced conformational change in the HIV-1 glycoprotein is believed
ultimately to lead to the insertion of the fusion peptide into the
target cell membrane. The details of this conformational change and how
the gp120-coreceptor interaction contributes to it are unclear.
However, recent studies have suggested that domains of gp41 may also be
involved in a conformational change leading to fusion. Mutagenesis of a
heptad repeat, leucine zipper-like motif in the ectodomain of gp41
demonstrated that the hydrophobicity of position 573 in the center of
the repeat dictated the efficiency with which gp41 mediated fusion
(9, 10, 16). It has been hypothesized, based on peptide
studies (7, 55-60), that this motif is involved in forming
a coiled-coil structure in the glycoprotein oligomer, similar to that
formed by an acid-activated fragment of hemagglutinin (HA)
(5), following receptor binding.
While it has been shown that the cytoplasmic tail of gp41 is not
required for fusion (17, 21, 62, 63), we and others have
shown that the fusion event does require that gp41 contain a
membrane-spanning peptide anchor, since substitution of a covalently linked lipid anchor for the membrane-spanning domain of gp41 did not
support fusion (46, 54). The structural requirements of this
membrane-spanning domain, however, are less clear. Truncation of the
gp41 carboxy terminus beyond the lysine residue at position 683 (HXB2
strain) is sufficient to cause a loss of membrane anchoring and
secretion of the glycoprotein in a soluble form (17, 43), whereas truncation to just after the arginine at position 696 results
in a stably anchored protein that is expressed on the cell surface
(43), suggesting that the minimal membrane-spanning domain
could be residues 684 to 695. Similar results have been obtained for
the simian immunodeficiency virus (SIV) Env proteins where residues 691 to 707 are sufficient to anchor the protein in the membrane and mediate
incorporation into virions (29). However, these truncated
glycoproteins were nonfunctional, and residues C terminal to this
minimal anchor domain are important for the function of the
glycoprotein (43). These results suggest that while the
glycoprotein can be forced to use an abbreviated membrane-spanning
domain, such a domain is not sufficient for the completion of the
fusion reaction.
The studies described here focus on a membrane-proximal region in the
ectodomain of gp41 that is unusually rich in tryptophan residues,
several of which are conserved in both primate and ungulate lentiviruses (Fig. 1A and B). This region
overlaps a biologically important domain of gp41. Two peptides, DP-178
and SJ-2176, derived from this membrane-proximal region of gp41 have
been shown to potently inhibit HIV-mediated fusion (28, 61).
A neutralizing human monoclonal antibody, 2F5, has also been described
whose epitope overlaps the C terminus of the DP-178 peptide (40,
41). Interestingly, this epitope has been shown to become
inaccessible following CD4 binding, suggesting that this region may
undergo a change in conformation (51).
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
A Conserved Tryptophan-Rich Motif in the
Membrane-Proximal Region of the Human Immunodeficiency Virus Type 1 gp41 Ectodomain Is Important for Env-Mediated Fusion and Virus
Infectivity

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ABSTRACT
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References
-helix, contains highly conserved hydrophobic residues and is
unusually rich in tryptophan residues. In addition, this domain
overlaps the epitope of a neutralizing monoclonal antibody, 2F5, as
well as the sequence corresponding to a peptide, DP-178, shown to
potently neutralize virus. Site-directed mutagenesis was used to create
deletions, substitutions, and insertions centered around a stretch of
17 hydrophobic and uncharged amino acids (residues 666 to 682 of the
HXB2 strain of HIV-1) in order to determine the role of this region in
the maturation and function of the envelope glycoprotein. Deletion of
the entire stretch of 17 amino acids abrogated the ability of the
envelope glycoprotein to mediate both cell-cell fusion and virus entry
without affecting the normal maturation, transport, or CD4-binding
ability of the protein. This phenotype was also demonstrated by
substituting alanine residues for three of the five tryptophan residues
within this sequence. Smaller deletions, as well as multiple amino acid
substitutions, were also found to inhibit but not block cell-cell
fusion. These results demonstrate the crucial role of a tryptophan-rich
motif in gp41 during a post-CD4-binding step of glycoprotein-mediated
fusion. The basis for the invariant nature of the tryptophans, however, appears to be at the level of glycoprotein incorporation into virions.
Even the substitution of phenylalanine for a single tryptophan residue
was sufficient to reduce Env incorporation and drop the efficiency of
virus entry approximately 10-fold, despite the fact that the same
mutation had no significant effect on syncytium formation.
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

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FIG. 1.
Sequence conservation and predicted structure of the
tryptophan-rich region. (A) Schematic representation of gp41, showing
the location and sequence variability of the tryptophan-rich region and
the overlapping sequences of the 2F5 epitope and DP-178 peptide. Shaded
regions indicate the N-terminal fusion peptide and the
membrane-spanning domain. The amino acids in the HIV-1 sequence
database which occur at each position are denoted underneath the
respective amino acid in the HXB2 strain. (B) Alignment of the
tryptophan-rich sequence of HIV-1 HXB2 gp41 with homologous regions of
HIV-2, SIV, and visna virus glycoproteins. Conserved tryptophan
residues are boxed. (C) Helical net projection of the tryptophan-rich
region. The outlined region indicates the cluster of conserved
hydrophobic residues shown in black.
In order to examine the role of the tryptophan-rich membrane-proximal domain of the HIV-1 gp41 ectodomain in the structure and function of the envelope glycoprotein, we have created deletion, substitution, and insertion mutations in this region by site-directed mutagenesis. Our analyses of the resulting mutant glycoproteins indicate that a stretch of 17 hydrophobic and uncharged amino acids immediately adjacent to the border of the membrane-spanning domain is dispensable for the normal maturation, transport, and CD4-binding ability of the protein but is required for Env-mediated membrane fusion. In contrast to the deletions and multiple point mutations required to abrogate fusion, even subtle mutations of the conserved tryptophan residues had a profound effect on incorporation of the mutant glycoproteins into virions and on virus infectivity. Features of the structure and function of this tryptophan-rich motif are discussed in relation to its possible function in the fusion mechanism and glycoprotein incorporation into virus.
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MATERIALS AND METHODS |
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Cell culture.
COS-1 and 293T cells were obtained from the
American Type Culture Collection. HeLa-CD4/LTR-
-gal cell lines were
obtained through the AIDS Reference and Reagent Program, Division of
AIDS, National Institute of Allergy and Infectious Diseases, and were originally contributed by Michael Emerman. Cells were maintained in
Dulbecco's modified Eagle medium (DMEM) containing 10% fetal bovine
serum. HeLa-CD4/LTR-
-gal cells were additionally maintained in
medium containing hygromycin and G418 (Geneticin) as recommended by the contributor.
Mutagenesis and construction of plasmids.
Construction of
the AK1 and AK2 mutants has been described previously (46).
To create the A
K1-K2 mutation, constructs containing either the AK1
or AK2 mutation were digested with AvaI, and the resulting
fragments of the two constructs were ligated to one another in such a
way as to delete the intervening sequence between the two mutations.
The +FLAG and +DAF mutations were created by site-directed mutagenesis
with the Altered Sites system from Promega.
Protein expression and radioimmunoprecipitation. SV40-based env expression plasmids were transfected into COS-1 cells in 60-mm-diameter plates by using DEAE-dextran (1 mg/ml). At 36 to 48 h posttransfection, the cells were starved in methionine- and cysteine-free DMEM for 20 min and pulse-labeled in methionine-cysteine-free DMEM supplemented with [35S]methionine-cysteine (357 µCi/ml; DuPont-NEN) for 30 min. The labeled cells were then chased in complete DMEM for 3 h prior to harvest of the medium and lysis of the cells. Cells were lysed by a 10-min incubation on ice in lysis buffer (1% Nonidet P-40, 0.1% sodium dodecyl sulfate [SDS], and 0.5% sodium deoxycholate, in phosphate-buffered saline [PBS]). Cellular debris was removed by centrifugation in a microcentrifuge for 5 min at 4°C. HIV-1 glycoproteins were immunoprecipitated from the cell lysate (C) and medium (M) by incubation for 1 h at 4°C with AIDS patient serum. The immune complexes were incubated for 30 min at room temperature with fixed Staphylococcus aureus cells (Staph A) and pelleted in a microcentrifuge. The pellets were washed three times in lysis buffer lacking 0.5% sodium deoxycholate and once in 20 mM Tris-HCl (pH 6.8) and were analyzed by SDS-polyacrylamide gel electrophoresis (PAGE).
CD4 binding assay. Following pulse-chase labeling of transfected COS-1 cells as described above, cells were lysed in lysis buffer lacking SDS. The cell lysate was clarified by centrifugation and divided into two tubes. One-half of the lysate was incubated with patient serum as described above. The other half was incubated overnight with 0.5 µg of CD4-immunoglobulin G (IgG) (Genentech; kindly provided by Mark Mulligan [University of Alabama at Birmingham]) at 4°C. Both samples were immunoprecipitated with Staph A and analyzed as described above.
Cell surface biotinylation. Glycoproteins on the cell surface were biotinylated based on the method of Lisanti et al. (34). Following pulse-chase radiolabeling as described above, transfected COS-1 cells were placed on ice in a cold room and washed three times with ice-cold PBS containing calcium and magnesium (PBS-C/M). The cells were then incubated with PBS-C/M containing 0.5 mg of NHS-SS-biotin per ml for 30 min on ice. The reaction was quenched by incubation of the cells in ice-cold serum-free DMEM for 10 min on ice. The cells were then washed twice with ice-cold PBS-C/M containing 20 mM glycine and lysed in lysis buffer containing 20 mM glycine. Following immunoprecipitation with patient serum as described above, the Staph A pellet was resuspended in PBS containing 2% SDS and boiled for 5 min. The sample was then diluted with PBS to a final concentration of 0.05% SDS and incubated with 40 µl of a 50% slurry of streptavidin-agarose beads (Pierce) at 4°C overnight. The beads were then pelleted, washed, and prepared for SDS-PAGE as described above for immunoprecipitates.
Cell-cell fusion assays.
Twenty-four hours posttransfection,
COS-1 cells in a six-well plate were trypsinized, mixed approximately
1:10 with untransfected HeLa-CD4/LTR-
-gal indicator cells, and
replated in a six-well plate. Twenty-four hours after replating, fusion
of the two cell types was detected microscopically following staining
in situ with
5-bromo-4-chloro-3-indolyl-
-D-thiogalactopyranoside
(X-Gal) as described previously (31).
Virus expression and pelleting. Virus expression was assayed by labeling COS-1 cells transfected with pNL4-3 proviral clones, followed by lysis, immunoprecipitation, and SDS-PAGE as described above for the analysis of glycoprotein expression.
For virus pelleting, 293T cells in 35-mm-diameter plates were transfected with pNL4-3 proviral clones by a modified calcium phosphate technique (8). Forty-eight hours after DNA was added to the cells, the cells were metabolically radiolabeled as described above for 30 min and chased for 20 h in 1 ml of complete growth medium. Culture supernatants were then collected and filtered through a 0.45-µm-pore-size filter to remove cellular debris. The filtered supernatants were then transferred to a microcentrifuge tube, underlaid with a 20-µl sucrose cushion (10% sucrose in PBS), and centrifuged for 4 h at room temperature in a microcentrifuge to pellet virions. The supernatant was then carefully and completely removed, and the virus pellets were lysed for 10 min at room temperature prior to immunoprecipitation with patient serum as described above and SDS-PAGE.Virus entry assay.
Sixty to seventy-two hours after
transfecting 293T cells as described for virus pelleting, culture
supernatants were collected and filtered through a 0.45-µm-pore-size
filter. Relative levels of reverse transcriptase activity were
determined for each sample as previously described (16), and
the volumes were normalized by dilution with complete medium. The
normalized supernatants were used to infect HeLa-CD4/LTR-
-gal cells
in duplicate as described previously by Kimpton and Emerman
(31). Supernatants were diluted as necessary to remain
within the quantifiable range of the assay.
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RESULTS |
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Mutagenesis of the membrane-proximal region of the HIV-1
transmembrane glycoprotein.
To examine the functional role of the
tryptophan-rich membrane-proximal region of gp41, deletion,
substitution, and insertion mutations were created (Fig.
2, left). Two mutations, AK1 and AK2,
were designed previously which created AvaI sites at the coding sequences for the lysines at either the N-terminal (AK1) or
C-terminal (AK2) border of the 17-amino-acid tryptophan-rich region
(46). These mutations substitute an Asn-Ser-Gly peptide sequence at either end of the tryptophan-rich sequence. In order to
determine if the tryptophan-rich region of gp41 was necessary for
fusion, a preliminary mutant, A
K1-K2, was constructed which contains
a deletion of 18 residues, including the entire tryptophan-rich sequence.
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665-682,
666-670,
671-677,
678-682, and
666-670/678-682) were then constructed to probe
for critical subdomains within this region. In addition, two mutations were specifically designed to probe the structural requirements of the
region. SC7 scrambles the central seven residues, 671 to 677, in a
nonconservative substitution pattern, switching the highly conserved
hydrophobic positions with the nonconserved neutral and polar positions
(Fig. 1A).
FN deletes two central nonconserved residues, Phe 673 and
Asn 674, in an attempt to disrupt the alignment of a potential
-helical structure (Fig. 1C).
Single amino acid substitutions were made for each of the conserved
tryptophan residues to determine their roles in the function of the
membrane-proximal region. Alanine was substituted for the first
(W666A), second (W670A), fourth (W678A), and fifth (W680A) tryptophan
residues within this 17-amino-acid stretch. Serine, proline, and
phenylalanine were all substituted for the third tryptophan (W672S,
W672P, and W672F, respectively). In addition, multiple substitutions
were combined to further define the sequence requirements of the
region. Multiple substitutions of alanine for tryptophan residues are
denoted by parenthetically listing the relative positions of the
changed tryptophans within the membrane-proximal region. For example,
W(2,3)A changes the second and third tryptophan residues to alanines.
One of these multiple substitutions, W(1,3,4)A, changes the three
tryptophan residues that are conserved in HIV-2 and SIV (Fig. 1B).
Finally two insertion mutants were generated. +FLAG introduces six
highly charged residues into the epitope of the 2F5 neutralizing monoclonal antibody in such a way as to create the eight-amino-acid FLAG epitope (Kodak-IBI). The other insertion mutant, +DAF, was designed to introduce the coding sequence of the nine membrane-proximal residues of human erythrocyte decay-accelerating factor (DAF) between
the tryptophan-rich region and the membrane-spanning domain.
Expression of envelope glycoprotein mutants.
Each of the
plasmids containing mutated env genes was transiently
expressed in transfected COS-1 cells. The proteins were metabolically
labeled in a pulse-chase experiment, and the resulting products were
immunoprecipitated from both the cell lysates and the cell medium (Fig.
3). All of the mutant glycoprotein
products were expressed at levels similar to those of the wild-type
protein and were processed normally to gp120 and gp41, with the sole
exception of the initial deletion, A
K1-K2. This mutation was found
to significantly reduce the efficiency with which the glycoprotein
precursor was proteolytically processed (Fig. 3, A
K1-K2, lanes C and
M). Processing of the
665-682 mutant glycoprotein, however, was not
significantly affected (Fig. 3,
665-682, lanes C and M).
Quantitation of the proportion of gp120 found in the medium relative to
cell-associated gp120 revealed no significant effects of the mutations
on gp120-gp41 association relative to wild-type Env (data not shown).
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K1-K2 and
665-682 mutants, released gp120, but not gp41 or gp160, into the culture medium (Fig. 3, M lanes), indicating that the mutant glycoprotein precursors and transmembrane subunits were stably anchored in the membrane. This demonstrates further that the membrane-proximal region is not only insufficient but
is also unnecessary for the stable association of the glycoprotein with
the membrane. The results presented above demonstrate that the
tryptophan-rich region is not required for the normal biosynthesis and
maturation of the glycoprotein.
Effects of the mutations on cell-cell fusion.
In order to
assess the fusogenicity of different constructs, we have found that
quantitation of the average number of nuclei per syncytium, rather than
the number of syncytia, typically provides a more consistent and
reproducible measure of this biological activity. For this study, we
used a highly sensitive approach to assay cell-cell fusion. COS-1 cells
expressing the mutant glycoproteins as demonstrated in the previous
experiments were mixed with HeLa-CD4/LTR-
-gal (MAGI) cells at a
ratio of approximately 1:10. Because the env expression
plasmids also express the viral Tat transcriptional activator protein,
fusion of the two cell types induces the expression of a
-galactosidase reporter gene under control of the viral long
terminal repeat (LTR) promoter (31). Because the
-galactosidase has been modified to contain a nuclear targeting
signal, the nuclei of the resulting syncytium stain a dark blue with
X-Gal in situ (31). This simplifies the microscopic
quantitation of both the average number of syncytia in a low-power
field and the average number of nuclei per syncytium. Immunofluorescent
staining of selected cultures scoring negative for fusion in this assay
demonstrated that individual COS-1 cells were indeed expressing high
levels of glycoprotein but were failing to fuse with the MAGI cells
(data not shown).
K1-K2 was found to be
completely defective in mediating fusion. Although this mutant was
processed less efficiently than the other mutants, it is unlikely that
the reduced level of processed glycoprotein, alone, was sufficient to
block fusion in this assay.
A more precise deletion of the entire tryptophan-rich region
(
665-682), as well as a deletion of the central seven amino acid
residues, alone (
671-677), was sufficient to abrogate cell-cell fusion, demonstrating conclusively that the tryptophan-rich region is
indeed critical for the fusion function of the glycoprotein. Deletion
of either the first or last five residues of the region (
666-670 or
678-682, respectively) resulted in an approximately 80% reduction
in fusogenicity as measured by both the average number of syncytia and
the average number of nuclei per syncytium. Since the central seven
residues were found to be necessary for membrane fusion to occur, the
deletions of the first and last five residues were combined to address
whether the central seven residues were also sufficient for fusion. The
resulting mutation,
666-670/678-682, also abrogated fusion,
indicating that the central seven residues of this sequence are
necessary but not sufficient to mediate the function of this region in
fusion. This suggested that multiple residues contribute to the
function of this region.
To distinguish between a requirement for the specific sequence of the
central portion of this region and simply a requirement for a certain
number of residues, the central seven amino acid residues were
scrambled. Because this sequence is predicted to form an amphipathic
-helix involving highly conserved hydrophobic residues (Fig. 1C),
particular effort was made to scramble the sequence such that the
positions of hydrophobic and polar residues were exchanged. The
resulting mutation, SC7, resulted in an almost fourfold reduction in
fusogenicity, indicating that there was some specificity for the
sequence of residues, but that this specificity was not absolute for
the functional role of the region.
To further test the potential role of an
-helical structure in the
function of this region, two central nonconserved residues were
deleted. The rationale was that such a deletion in the middle of a
helix would skew the structure such that residues that previously aligned on one face of the helix would become displaced. This mutation,
FN, was found to have no significant effect on fusion, arguing
against a required helical organization of the tryptophan residues.
Because the most striking feature of this region of the glycoprotein is
the unusually high density of tryptophan residues, all of which are
highly conserved in all HIV-1 isolates, single amino acid substitutions
were made at each of these five positions. Surprisingly, none of these
substitutions had any significant effect on fusion. None were as
fusogenic as the wild type, but the greatest effect of any one mutation
was only a 25% reduction in fusion (W680A). While most of the
tryptophans were replaced only with alanine, the central tryptophan was
substituted for with serine, proline, and phenylalanine. The lack of a
major effect caused by the proline substitution provided further
evidence against the requirement for a rigid
-helical structure in
this region.
Since single amino acid substitutions had only a limited effect on
fusion, multiple mutations were combined and assayed for an effect.
Substitution of alanine for all five of the tryptophan residues
together [W(1-5)A] was sufficient to abrogate fusion, demonstrating
that the function of this region is indeed dependent on the highly
conserved tryptophan residues. Surprisingly, however, the replacement
of even a single tryptophan [W(2-5)A] was sufficient to return
fusion to approximately 70% of the wild-type level. Even more
surprising was the abrogation of fusion when just the first three
tryptophans were replaced [W(1-3)A]. The other combinations of
substitutions were only slightly less fusogenic than the single amino
acid substitutions. This includes the W(1,3,4)A mutation, which changed
the three tryptophans that are also conserved in HIV-2 and SIV (Fig.
1B).
Finally, two insertion mutations, +FLAG and +DAF, were found to
completely abrogate fusion. The +FLAG mutation inserts six residues,
five of which are charged, between two charged residues within the
epitope for 2F5. Although this region is accessible to the 2F5 antibody
and is relatively refractory to substitution mutations (AK1 and W666A)
as well as deletions (
666-670), these results indicate that it
cannot accommodate amino acid insertions and still maintain function.
The +DAF mutation, which inserts nine residues from the human DAF
protein between the tryptophan-rich region and the membrane-spanning domain, also completely abrogated syncytium formation. The insertion of
a similar peptide into the analogous position in influenza virus HA did
not affect fusion (30), and so it is likely that the
tryptophan-rich region must function in close proximity to the membrane
to induce syncytium formation.
Ability of the mutant glycoproteins to bind CD4. To determine whether mutations in the tryptophan-rich region affected the ability of the glycoprotein to bind CD4, selected mutant glycoproteins which exhibited reduced levels of fusion or a lack of fusion were immunoprecipitated from metabolically radiolabeled COS-1 cells with CD4-IgG in parallel with patient serum (Fig. 4). All of the mutant glycoproteins bound CD4-IgG at levels similar to those of wild-type glycoprotein, indicating that the membrane-proximal region was dispensable for the efficient binding of the glycoprotein to its primary receptor.
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Transport of the mutant glycoproteins to the cell surface. Because the ability of the mutant glycoproteins to form syncytia could be affected by reduced cell surface expression, it was necessary to determine the relative levels of each of the fusion-defective mutant glycoproteins on the surface of transfected cells compared to the level of wild-type glycoprotein. Metabolically radiolabeled cells expressing mutant glycoproteins were treated on ice with the membrane-impermeable, thiol-cleavable biotinylation reagent NHS-SS-biotin. Viral glycoproteins were initially immunoprecipitated from the cell lysate of transfected COS-1 cells by using HIV-positive patient serum to isolate the viral protein from cellular proteins. The immune complexes were then denatured by being boiled in SDS, and a portion of this immunoprecipitate was reserved for analysis in parallel with subsequent samples. The remaining sample was incubated a second time with streptavidin-agarose to isolate just the subpopulation of viral glycoproteins which were exposed to biotinylation reagent on the cell surface.
As can be seen in Fig. 5, all of the fusion-defective glycoprotein mutants except A
K1-K2, which was
also found to be processed inefficiently, were detected on the cell
surface at levels similar to wild-type glycoprotein. To control for
biotinylation of only glycoproteins that were expressed on the cell
surface, a modified HIV-1 glycoprotein containing an endoplasmic
reticulum retrieval signal attached to the C-terminus of its
cytoplasmic tail (42) was included as a negative control.
This mutant glycoprotein, ERRS, is efficiently retrieved from the Golgi
complex and, thus, is not processed to gp120 or expressed on the cell
surface (47). Little or no ERRS gp160 could be detected with
the biotinylation reagent (Fig. 5, Cell Surface, lane ERRS), despite
the efficient expression of the glycoprotein intracellularly (Fig. 5,
Cell Lysate, lane ERRS). Therefore, the assay was specific for proteins
on the surface of the cell. Cell-surface immunofluorescent staining performed with the same subset of fusion-defective mutants was found to
be consistent with the results presented here (data not shown). Thus,
the effect of these mutations on fusion appears to be independent of
the relative levels of glycoprotein on the cell surface.
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Expression of the envelope glycoprotein mutants in the context of virus. The hydrophobic residues within the 17-amino-acid membrane-proximal region are all highly conserved, including the five tryptophan residues, which are present in every isolate of HIV-1 sequenced to date (Fig. 1A). Thus, it was surprising that only relatively severe mutations affecting these residues abrogated fusion in the cell-cell assay. In order to determine the effects of these mutations in a more biologically relevant functional assay, representative mutations were cloned into the pNL4-3 proviral construct for analysis of their effects on virus entry.
Figure 6 shows a pulse-chase analysis of viral protein expression for selected proviral constructs with various fusion phenotypes. All of the constructs express similar levels of normally processed glycoprotein, as well as Gag structural proteins, the Pr55 precursor and p24 capsid protein, compared to the levels of the wild-type construct. The other proviral constructs not depicted on this gel also expressed similar levels of properly processed viral proteins (data not shown).
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Effects of the mutations on virus entry.
To determine the
effect of the mutations within the tryptophan-rich region on virus
entry, virus was harvested from cells expressing the mutant proviral
constructs and filtered to remove cellular debris. The relative levels
of reverse transcriptase activity were determined for each of the virus
stocks as a measure of the relative virus concentrations. The viral
stocks were then normalized by appropriate dilution with media and used
to infect MAGI cells. As with the cell-cell fusion assay above, the use of MAGI cells provides a highly sensitive assay for virus entry. Upon
infection of the MAGI cell and expression of viral proteins, Tat
induces expression of the
-galactosidase reporter gene. After staining in situ 48 h after virus adsorption, individual virus entry events can be scored by the presence of either single blue cells
or blue syncytia, both containing intensely stained nuclei. Titration
of virus stocks was shown to give linear results in this assay over a
range of at least 3 logs, and in situ staining and microscopic
quantitation have been shown to be much more sensitive than staining of
cell lysates for colorimetric quantitation (31).
666-670 and
678-682). Since these results did not parallel the results of the
cell-cell fusion assay, it was important to determine whether these
proviral constructs were capable of mediating cell-cell fusion
comparably to the glycoprotein expression constructs. When cells
expressing each of the viral constructs were mixed 1:10 with MAGI
cells, the levels of fusion seen with each construct paralleled the
results of the COS-1 cell-mediated fusion assays (compare Fig. 7B with Fig. 2). Moreover, in the virus entry assays, those mutant constructs which showed limited infectivity and which were permissive in the
cell-cell fusion assay yielded small syncytia of a size similar to
those seen with the wild-type clones (data not shown). These results
demonstrate that the dramatic decrease in virus entry seen with the
permissive mutant viral constructs was not due to a general defect in
fusion, but rather to a specific inhibition of virus entry.
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Incorporation of the envelope glycoprotein mutants into virions. In order to determine whether defects in infectivity reflected a difference in the efficiency with which the mutant glycoproteins were incorporated into virions, the composition of released virions was assessed following metabolic labeling. Supernatants were collected from cells expressing the proviral constructs and filtered to remove cellular debris. Virus was pelleted from the supernatants through a sucrose cushion and solubilized for immunoprecipitation and SDS-PAGE. As can be seen in Fig. 8, the mutant glycoproteins were all detected in the viral pellets at levels much lower than those of wild-type glycoprotein. This demonstrates that even subtle changes in the tryptophan-rich region can dramatically affect incorporation of glycoprotein into virions.
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DISCUSSION |
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The region proximal to the N-terminal border of the
membrane-spanning domain of the HIV-1 glycoprotein is unusually rich in tryptophan residues, containing five that are conserved in all sequenced strains of HIV-1, and is predicted by computer algorithms to
form an
-helix with a partial amphipathic character (Fig. 1C). Three
of these tryptophan residues, the first, third, and fourth in this
region, are also completely conserved among sequenced strains of HIV-2
and SIV (Fig. 1B). Two of the tryptophan residues align with the
analogous region in the visna virus lentiviral glycoprotein, and a
third is present within the membrane-spanning domain of this protein.
In addition to the tryptophan residues, the other hydrophobic residues
in this region are also very highly conserved among different strains
of HIV-1 (Fig. 1A). This region of the HIV-1 glycoprotein also overlaps
the C-terminal sequence of a peptide, DP-178, which has been shown to
potently inhibit fusion and virus entry (61), as well as the
epitope for a neutralizing human monoclonal antibody, 2F5 (Fig. 1A).
These factors suggest an important role for the membrane-proximal
region in the function of lentiviral glycoproteins.
All of the mutated Env proteins were expressed at levels comparable to
those of wild-type Env and, except for A
K1-K2, were transported and
processed normally. This suggests that all of these proteins folded in
a manner similar to that of wild-type Env, since multiple studies
suggest that misfolded oligomeric membrane glycoproteins tend not to be
transported through the normal secretory pathway but are, rather,
retained in the endoplasmic reticulum and degraded intracellularly
(14). In addition, Env proteins with mutations which
resulted in reduced levels of fusion were maintained on the cell
surface at steady-state levels comparable to those of wild-type Env.
Thus, the decreased levels of fusion seen with these mutants do not
appear to be due to lower concentrations of Env on the cell surface.
Finally, mutated Env proteins exhibiting reduced levels of fusion were
capable of binding CD4 as efficiently as wild-type Env, indicating that
the effect on fusion was independent of primary receptor binding.
Previous analyses by successive truncations of gp41 have demonstrated
that amino acid residues 666 to 682 of the HIV-1 transmembrane glycoprotein are not sufficient to anchor the protein in the membrane (17, 43). Our results from the deletion of this region
(mutant
665-682) demonstrate further that this region is also not
necessary for the stable anchoring of the envelope glycoprotein complex in the plasma membrane. This is consistent with lysine 683 forming the
amino-terminal border of the membrane-spanning domain. Our results also
demonstrate that residues 666 to 682 are not necessary for the
transport and processing or CD4-binding capability of the envelope glycoprotein.
A deletion of 11 residues, which included the entire 2F5 epitope and
which overlapped the DP-178 and tryptophan-rich regions, has been shown
previously to abrogate fusion (44). This deletion overlapped
the site of the +FLAG insertion, which we demonstrate also abrogated
fusion. However, since our
666-670 mutation did not abrogate
fusion, the effect of the previously reported 11-residue deletion
appears not to have been due solely to the deletion of residues within
the tryptophan-rich region.
The mutant AK2 is similar to a mutant reported by Helseth et al. in which the lysine which forms the amino-terminal border of the membrane-spanning domain was substituted for by an isoleucine (26). However, unlike that mutant, which essentially abrogated fusion, AK2, which substitutes three amino acids including an asparagine for the membrane-bordering lysine, maintained a significant level of fusogenicity (about 30% of the wild-type level). Since substitution of the hydrophobic residues at positions 684 and 685, which were also substituted in the AK2 mutation, had been shown previously not to affect fusion (20), it is likely that substitution of Lys 683 is responsible for the effect of the Helseth mutation. Perhaps the polarity of the asparagine in this position in the AK2 mutant, together with the adjacent serine, preserves the functionality of this region.
The central seven amino acid residues in the tryptophan-rich region,
671 to 677, appear to be critical for the cell-cell fusion activity of
the transmembrane glycoprotein. The reduction of the fusogenicity of
the glycoprotein by scrambling these central residues (mutant SC7)
suggests that the clustering of hydrophobic residues in an
-helical
secondary structure as modeled in Fig. 1C may indeed be important, but
not essential, for the function of this region. The mutation
FN was
found to have no significant effect on fusion. This result would argue
against a topological requirement for a helical structure, but it does
not necessarily preclude the existence of such a structure. Indeed,
when the mutated sequence was modeled as a helical net, the conserved
hydrophobic residues still tended to cluster together on one face of
the helix, although in a somewhat distorted arrangement (data not
shown). The lack of major effect caused by the proline substitution for
the central tryptophan (W672P) further suggests that a rigid helical
structure in this region is not required, although again this does not
preclude the existence of a relatively refractory helical structure.
Indeed, in the context of membranes, proline residues have been found to stabilize
-helical secondary structure, while disrupting
-sheet structures (33).
Residues 666 to 670 and 678 to 682 also appear to affect fusion, because deletion of these residues reduced, but did not block, cell-cell fusion. Our results suggest that the specific amino acid sequence of residues 665 to 667 is not critical for cell-cell fusion, since the AK1 mutant was fusogenic. Therefore, it is unlikely that the epitope for the neutralizing monoclonal antibody 2F5 which overlaps these residues is involved in a specific molecular interaction during the cell-cell fusion event. Since the epitope for 2F5 is accessible to antibody, it seemed possible that this epitope might accommodate the additional hydrophilic residues added in the +FLAG mutation and perhaps allow the use of the commercially available anti-FLAG M2 monoclonal antibody (Kodak-IBI) to neutralize virus. However, the +FLAG mutation blocked fusion, perhaps by acting in an analogous fashion to the bound antibody in preventing fusion.
Recent results from structural analyses of gp41 suggest that the
inhibitory peptide, DP-178, might act by competing for a binding groove
(for a C-terminal heptad repeat) on a coiled-coil trimer formed from an
amino-terminal heptad repeat (7, 56). Since
666-670
maintained a reduced level of fusogenicity, it seems likely that the
C-terminal portion of DP-178, which overlaps residues 665 to 673, is
not absolutely required for the formation of a stable six-helix
coiled-coil bundle. However, in an analysis of the inhibitory potential
of truncated DP-178 peptides, this overlapping region appeared to be
important for the inhibitory function of DP-178 (59). One
might expect that DP-178 would inhibit fusion of glycoproteins with
mutations in this region as well as, if not better than, the wild-type
glycoprotein, since it would now be competing with a truncated
C-terminal heptad repeat. Mutants AK1, W(2,3)A, and W666A/W672S were
therefore tested for their ability to be inhibited by DP-178 in the
cell-cell fusion assay, and all were inhibited completely by the
peptide, as was the wild-type protein (data not shown). Recent studies
with more sensitive fusion assays indicate that such mutants are indeed more susceptible to inhibition by DP-178 (39).
Although the tryptophan-rich region is predicted to be
-helical,
modeling the region as a
-strand also positions all five tryptophans
on the same side of the structure (data not shown). However, in this
case, the conserved hydrophobic residues are interspersed with the
nonconserved polar residues. Interestingly, the structure of the fusion
peptide of gp41 from peptide studies appears to be a
-strand until
it contacts the lipid bilayer, at which time it transitions to a partly
-helical structure (36). Thus, the tryptophan-rich
region, which has similar characteristics to the fusion peptide and
could interact with membranes, may also undergo a conformational change
involving the conserved tryptophan residues. In support of this
hypothesis, the 2F5 epitope which overlaps the N-terminal end of this
region can no longer be recognized by antibody following CD4 binding
(51), suggesting that this region may indeed undergo a
conformational change or become sequestered in the membrane during
fusion. Thus, fusion-inhibitory mutations within the tryptophan-rich
domain may interfere with a late step in membrane fusion, perhaps
involving an interaction with, and possibly the disruption of, the
membrane in which the glycoprotein is anchored.
Substitution of alanines or other amino acids for the individual conserved tryptophan residues had no significant effect on cell-cell fusion. It is important to note, however, that the overnight cell-cell fusion assay employed here may not reveal subtle variations in the kinetics of the fusion reaction among different mutated proteins. Results from mutations combining multiple tryptophan substitutions demonstrate both the unusual resiliency and intricacy of the function of this region during fusion. The fact that W(1-5)A and W(1-3)A both abrogated syncytium formation suggested that the first three tryptophans were critical for the function of this region, but other combinations of mutations have failed to pinpoint any particular tryptophan residue as critical for the function of this domain. Indeed, recent studies suggest that even the W(1-5)A mutant can induce the formation of small fusion pores but that these are unable to be propagated into syncytia (39).
A striking feature of many of the mutations analyzed was the propensity to inhibit virus entry to levels at the limit of detection, while having only a limited effect on syncytium formation. For example, the W672P and W672F mutants exhibited less than a 20% reduction in fusogenicity compared to wild-type Env, yet reduced the number of virus entry events by almost 90% compared to the wild type. The most likely explanation for this dramatic effect on virus entry is that the reduced concentration of Env protein on the surface of the virion is below a critical concentration required for virus-cell fusion. In contrast, the high concentration of Env protein on the cell surface may facilitate fusion, overcoming a block to fusion which occurs in the context of virus, perhaps by enhancing the recruitment of Env oligomers into fusion pores. Studies with influenza virus HA have demonstrated that variations in the cell surface concentration of fusogenic protein oligomers correspond directly with the efficiency of fusion pore formation (11). W672F and W672P, however, were much more efficient at mediating virus entry relative to the other mutants, even though cell-cell fusion efficiencies and the reduced levels of incorporation appeared similar. This discrepancy could indicate that the virus entry assay is able to discriminate more subtle differences in fusogenicity than the cell-cell assay. It does indicate that these mutants are less defective for fusion in the context of the virus than the other mutants tested.
It is clear from the striking effect of a conservative single amino acid substitution (W672F) on incorporation of glycoprotein into virions and virus entry that the function of this region in the virus life cycle is dependent specifically upon the tryptophan residues which lie within it, rather than simply on the hydrophobic moment of the domain or the presence of an aromatic side chain. This result may explain the absolute conservation of these residues among all strains of HIV-1. Tryptophan residues have been suspected to play an important role in a number of biologic processes (2). One possible role for the conserved tryptophan residues in enhancing the incorporation of glycoprotein into virions could involve an interaction with components of the membrane, such as cholesterol (12). Such interactions could facilitate the enrichment of glycoprotein within certain subdomains of the plasma membrane (4) through which the virus might bud. HIV does contain a higher cholesterol/phospholipid ratio in its viral membrane than is found in most cell membranes (1). An interaction with cholesterol in the target cell membrane might also facilitate membrane fusion. Interestingly, the presence and positioning of tryptophan residues in the bee venom peptide melittin have been shown to be critical for its hemolytic activity (2). Thus, the conserved tryptophan residues could interact with cholesterol in either the membrane in which the glycoprotein is anchored, the target cell membrane, or both. The effects of these mutations within the tryptophan-rich region of HIV-1 Env are similar to those found upon mutagenesis of an analogous region of the Newcastle disease virus fusion protein, which was also relatively refractory to single amino acid substitutions but sensitive to multiple, combined substitutions (45). This region of the Newcastle disease virus fusion protein contains a leucine zipper-like motif and was also hypothesized to interact with membranes during fusion because of its proximity to the membrane.
In an earlier mutational analysis of this region, Cao et al. (6) concluded that the single amino acid substitution W672P resulted in Env proteins which were up to twice as fusogenic as wild-type Env in a syncytium assay. Cell-cell fusion was quantitated by counting the number of syncytia per unit of area in a transfected T-cell culture. We were unable to duplicate these results in syncytium assays using adherent cells. Cao et al. also reported that the effect of W672P and other single amino acid substitutions within this region on virus entry was minimal. Virus entry into T cells was determined by using an env transcomplementation system (25), and complemented virus was produced by cotransfection of an env expression plasmid with an env-defective provirus containing a chloramphenicol acetyltransferase (CAT) reporter gene. Relative levels of entry were determined by measuring the CAT activity in the lysates of T cells following incubation with virus. In a complementation assay such as this, it may be possible to "overload" virions with more Env protein than would normally be incorporated into virus expressed from a complete genome. If such were the case, then the complementation assay might be expected to underestimate the detrimental effects of subtle mutations on virus replication in much the same way as a syncytium assay may underestimate a mutation's effect on membrane fusion. This may explain why the same mutation was much more inhibitory in the context of an intact provirus from our analysis than it was in the complementation system from the previous study.
It is unclear at present how this region, and the conserved tryptophan residues in particular, are functioning in the membrane fusion mechanism. It is also unclear how even conservative mutations within this tryptophan-rich motif dramatically reduced the efficiency with which glycoprotein was incorporated into virions. Interestingly, however, mutations within the proteolytic cleavage site of gp160 have also been shown to reduce glycoprotein incorporation (15), suggesting that the conformation of the glycoprotein ectodomain can affect molecular interactions during virus assembly.
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ACKNOWLEDGMENTS |
|---|
We thank Mark Mulligan (University of Alabama at Birmingham) for providing CD4-IgG (Genentech) and Eric Freed (National Institutes of Health) for providing the pNL4-3 construct.
This work was supported by research grant AI-33319 from the National Institutes of Health. Virus culture was performed in the University of Alabama at Birmingham Center For AIDS Research Central Virus Core Facility, supported by program grant AI-27767 from the National Institutes of Health. K. Salzwedel was supported in part by training grant CA-09467 from the National Institutes of Health.
| |
FOOTNOTES |
|---|
* Corresponding author. Mailing address: Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294. Phone: (205) 934-4321. Fax: (205) 934-1640. E-mail: ehunter{at}uab.edu.
Present address: Laboratory of Viral Diseases, National Institute
of Allergy and Infectious Diseases, Bethesda, MD 20892.
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