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Journal of Virology, February 1999, p. 1262-1270, Vol. 73, No. 2
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Limited Protection from a Pathogenic Chimeric
Simian-Human Immunodeficiency Virus Challenge following
Immunization with Attenuated Simian Immunodeficiency
Virus
Mark G.
Lewis,1,*
Jake
Yalley-Ogunro,1
Jack J.
Greenhouse,1
Terry P.
Brennan,1,
Jennifer Bo
Jiang,1
Thomas C.
VanCott,1
Yichen
Lu,2
Gerald A.
Eddy,1 and
Deborah L.
Birx3
Henry M. Jackson
Foundation1 and
Division of
Retrovirology, Walter Reed Army Institute of
Research,3 Rockville, Maryland 20850, and
Virus Research Institute, Cambridge, Massachusetts
021382
Received 31 July 1998/Accepted 2 November 1998
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ABSTRACT |
Two live attenuated single-deletion mutant simian immunodeficiency
virus (SIV) constructs, SIV239
nef and
SIVPBj6.6
nef, were tested for their abilities to
stimulate protective immunity in macaques. During the immunization
period the animals were examined for specific immune responses and
virus growth. Each construct generated high levels of specific immunity
in all of the immunized animals. The SIV239
nef construct
was found to grow to high levels in all immunized animals, with some
animals remaining positive for virus isolation and plasma RNA
throughout the immunization period. The SIVPBj6.6
nef was
effectively controlled by all of the immunized animals, with virus
mostly isolated only during the first few months following immunization
and plasma RNA never detected. Following an extended period of
immunization of over 80 weeks, the animals were challenged with a
pathogenic simian-human immunodeficiency virus (SHIV) isolate,
SIV89.6PD, by intravenous injection. All of the
SIV239
nef-immunized animals became infected with the
SHIV isolate; two of five animals eventually controlled the challenge
and three of five animals, which failed to check the immunizing virus,
progressed to disease state before the unvaccinated controls. One of
five animals immunized with SIVPBj6.6
nef totally
resisted infection by the challenge virus, while three others limited
its growth and the remaining animal became persistently infected and
eventually died of a pulmonary thrombus. These data indicate that
vaccination with attenuated SIV can protect macaques from disease and
in some cases from infection by a divergent SHIV. However, if animals
are unable to control the immunizing virus, potential damage that can
accelerate the disease course of a pathogenic challenge virus may occur.
 |
INTRODUCTION |
Currently the most effective means
of vaccination under development by the human immunodeficiency
virus (HIV) scientific research community is attenuated virus. The
studies of attenuated lentiviruses have been limited to animal models
(2, 9, 13, 27, 31, 38, 47) and a few naturally occurring
cases in the human population (10, 22, 26). All of the
naturally attenuated viruses isolated from both humans and macaques
have been reported to cause little or no pathogenicity in the infected
hosts (22, 26), although reversion to pathogenic virus has
been reported (46). Attenuated isolates, constructed by
molecular biologic techniques (9, 13, 33), have been used to
immunize adult nonhuman primates with little observed pathology,
although recent studies have found that they can cause disease in
newborn macaques (4, 48). The attenuated-virus vaccine
strategy has been tested and proven to be very effective at protecting
juvenile to adult animals from homologous challenge virus (2, 9,
27, 31, 47). Inactivated isolates tested in vivo have included
both natural (2, 3, 31) and constructed deletions in the
nef coding region (9), and constructs with
deletions in the accessory genes vif, vpr, and
vpx and in downstream portions of the nef coding
regions found in the 3' long terminal repeat have also been studied
(13). As was originally predicted by Daniel et al.
(9) during their studies involving the nef gene
deletion mutants of simian immunodeficiency virus (SIV), the greater
the number of deletions built into the virus accessory genes, the less
efficiently the virus grows both in vitro and in vivo, suggesting a
lower pathogenicity. This lower growth potential is associated with a
reduced immune response and less-effective protection following
challenge (13). Evaluation of the immune responses following
immunization has revealed that the attenuated virus can induce potent
immunity associated with both humoral and cellular responses (18,
47). Upon challenge with homologous and heterologous SIV/HIV-2,
animals immunized with nef deletion mutants or mutants with
deletions in nef and vpr were usually completely
protected from the challenge. Immunized animals infected with the
challenge virus were found to limit the replication and survive
significantly longer than unimmunized controls; however, this has not
always been true for all attenuated-virus isolates (11, 46).
The mechanism of protection induced by attenuated lentiviruses is
currently unknown. Immunized animals have been shown to produce strong
cellular and humoral responses to the immunizing virus, including
cytotoxic T-cell production (18), helper T-cell responses
(15), and neutralizing antibodies (18).
Unfortunately, no correlates of the protective immunity have been
determined. Passive antibody transfer studies recently performed by
Almond et al. (3) have not shown any linkage between the
antibodies developed following immunization and the observed
protection. In addition, recent studies by Langlois et al.
(23) have shown that the antiviral antibodies generated by
attenuated-SIV-immunized animals fail to neutralize the SIV challenge
stocks in vitro. In vivo depletion of lymphocytes with anti-CD57 or
anti-CD8 monoclonal antibody treatments did not affect the protective
responses of the immunized animals (39). These studies
suggest that the mechanism may be viral interference by receptor
blocking (45) or the presence of other nonspecific immune
mediators, such as cytokines or chemokines (6, 7, 12, 41).
The present studies were designed to focus on the humoral responses
generated during immunization and to determine the breadth of the
protective response by challenging with a pathogenic simian-human immunodeficiency virus (SHIV) that contains an HIV-1-derived
envelope. The challenge virus, SHIV89.6PD, is highly
infectious and causes a rapid pathology in macaques (25, 28, 34,
40). It was constructed by using the SIV239 molecular
clone as the backbone with the substitution of the
HIV-189.6 envelope gene for the SIV239 envelope
(35). The construct has recently been described by Reimann
et al. (35), and an in vivo-passaged isolate has been derived and cloned (20). This isolate infects macaques when they are challenged either by intravenous injection or application on
mucosal surfaces (25, 40) and causes a rapid disease course with a near-total loss of detectable CD4 cells. For the present studies
we chose to use two nef-deleted SIV strains,
SIV239
nef (9) and
SIVPBj6.6
nef (33). The results of this
study show that these attenuated viruses can totally protect some
animals from infection with the SHIV89.6PD and that if
infection occurs, the acute-disease course can be altered. However,
animals that were unable to control the immunizing viruses were found
to have difficulty in controlling the challenge virus and were
subsequently found to progress to disease more rapidly than the controls.
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MATERIALS AND METHODS |
Animals.
Animals used in this study were captive-bred,
juvenile rhesus macaques from a breeding colony in the United States or
imported pigtailed macaques. All animals were screened and confirmed to be free of antibodies to SIV, simian retrovirus (SRV), and simian T-cell leukemia virus type 1 (STLV-1) and free of isolatable SIV and SRV following culture performed prior to their inclusion in the
study. The animals were housed in accordance with American Association
for Accreditation of Laboratory Animal Care standards.
Virus stocks.
Construction of the
SIV239
nef and SIVPBj6.6
nef
viruses has been described previously (9, 33). The
SIV239
nef virus stock was supplied by Ronald C. Desrosiers. The SIVPBj6.6
nef construct was supplied
by Frank Novembre. The attenuated-virus stocks used for this experiment
were grown in CEM×174 cells in an acute infection with harvest at day
12 postinoculation (p.i.). The stocks were filtered through a
0.45-µm-pore-size filter and frozen in aliquots at
165°C. The
titers of these stocks were 103 50% tissue culture
infective doses (TCID50) per ml, as measured by using log
dilutions on CEM×174 cells. The rhesus macaques were inoculated
intravenously with 1.0 ml of the undiluted SIV239
nef stock, and the pigtailed macaques were inoculated intravenously with
the SIVPBj6.6
nef stock. The SHIV89.6
construction has been previously described (35). The
pathogenic isolate derivation has been described in detail by Reimann
et al. (34). The specific isolate (SHIV89.6PD)
used in these studies was derived in CEM×174 cells from culture with
the plasma of the second in vivo-passage of the 89.6 isolate
(25). The virus stock was produced from acute infection of
macaque peripheral blood lymphocytes for 7 days. The titer of the stock
was 2.5 × 104 TCID50/ml in CEM×174 cells
and 2.5 × 104 50% macaque infectious doses. The
animals were challenged with 25 50% infective doses of the
SHIV89.6PD construct/ml by intravenous injection.
Virus detection and isolation.
SIV p27 was detected in
the plasma of the macaques by using an SIV p27-specific
enzyme-linked immunosorbent assay (ELISA) (Coulter Diagnostics, Miami,
Fla.). For isolating virus, macaque peripheral blood lymphocytes were
isolated by using a 95% Ficoll-Hypaque separation solution (Sigma, St.
Louis, Mo.). Approximately 2.5 × 106 cells were
placed in 2.5 ml of RPMI 1640 medium containing 10% fetal bovine
serum, 0.5% gentamicin, 5.0% glutamine, and 5 mg of
phytohemagglutinin-p (PHA-p) (Sigma) per ml. Following 3 days of
culture, the supernatant was removed and a portion was tested for the
presence of SIV p27 (Coulter Diagnostics). The cells were washed
free of PHA, adjusted to 106/ml, and placed in media
without PHA-p and with 10% recombinant interleukin-2 (Boehringer
Mannheim, Indianapolis, Ind.). An equal number of human 3-day
PHA-blasted peripheral blood mononuclear cells (PBMC) were then added.
Cultures were readjusted to 106 cells/ml every 3 to 4 days
with a 100% medium change and assayed twice per week for the presence
of SIV p27. Cultures were held for up to 4 weeks. A culture was
designated as positive after positive test results were obtained from
two successive specimens.
Flow cytometry.
Peripheral blood lymphocyte subset analysis
was performed on a FACScan flow cytometer (Becton Dickinson, Mountain
View, Calif.) with a panel of mouse anti-human monoclonal antibodies to
B cells (phycoerythrin-conjugated CD20), T cells (fluorescein
isothiocyanate-conjugated CD2), and T-cell subsets
(phycoerythrin-conjugated CD4 and fluorescein isothiocyanate-conjugated
CD8) (Becton Dickinson). Analysis was performed by a whole-blood-lysis
procedure as directed by the manufacturer.
Anti-SIV antibody ELISA.
Circulating SIV antibodies
were detected by an HIV-2 ELISA (Genetic Systems, Seattle, Wash.) which
is cross-reactive for SIV antibody. The ELISA used a fixed plasma
dilution of 1:200. All samples from an individual animal were run at
the same time. The assay was run as directed except that the plates
were read on a Vmax kinetic ELISA reader (Molecular Devices, Menlo
Park, Calif.) at 650 nm. Values of 10
3 optical density
(OD) units per min minus background were used as ELISA units.
ELISA measurement of HIV-1 gp160-specific serum IgG binding.
Affinity-purified oligomeric HIV-1 gp160451 (Advanced
Bioscience Laboratories, Kensington, Md.) (0.65 µg/ml in
phosphate-buffered saline) (PBS) (pH 7.4; 0.01% thimerosal) was coated
onto Immulon 2 microtiter plates (Dynatech, Chantilly, Va.), left
overnight at 4°C, and assayed as described previously
(44). Oligomeric gp160 was affinity purified from cell
cultures infected with HIV-1451 as described previously
(19). Briefly, plates were washed twice with wash buffer
(PBS with 0.1% Tween 20 [pH 7.4]) prior to the incubation with
twofold dilutions of macaque serum, diluted in diluent (wash buffer
with 5% skim milk [pH 7.4]), for 1 h at 37°C. Plates were
washed three times with wash buffer and incubated with horseradish
peroxidase-conjugated goat anti-monkey immunoglobulin G (IgG) (Nordick
Laboratories, San Clemente, Calif.) (diluted 1:4,000 in serum diluent).
After a 1-h incubation at 37°C, plates were washed three times and
substrate [2,2'-azinobis(3-ethylbenzthiazolinesulfonic acid);
Kirkegaard and Perry, Gaithersburg, Md.] was then added. The reaction
was stopped with addition of 0.5% sodium dodecyl sulfate after 30 min
at 37°C.
Quantitative PCR of viral RNA.
Circulating levels of viral
RNA were determined with an externally controlled PCR assay. Serum
samples were rapidly thawed at 37°C, and to each sample an equal
volume of 1× PBS containing 5 mg of heat-inactivated bovine serum
albumin (Sigma) per ml was added. Samples were centrifuged at
12,000 × g for 30 min at 4°C. The viral pellets were
resuspended and lysed in 800 µl of Tri-reagent (Molecular Research
Center, Woodland, Tex.) and purified following the manufacturer's
instructions. Quantitative liquid hybridization was carried out by a
modification of the method described by Vahey et al. (43) by
using SIV gag sequences. The assay employs external standards consisting of cloned templates of a cognate region of SIVsmh4 gag DNA from a plasmid clone, p5'4i
(16), obtained from Vannesa Hirsch. SIV gag
RNA was amplified by reverse transcriptase-linked PCR. Reverse
transcription was carried out in 40 µl of solution containing 7 µl
of 5× first-strand buffer (Gibco-BRL), 20 U of RNasin (Promega,
Madison, Wis.), 0.4 µl of 25 mM deoxynucleoside triphosphates and 200 U of Superscript RT (Gibco-BRL, Gaithersburg, Md.). Incubation was for
10 min at 45°C. SIV gag DNA was amplified in 100 µl
of a solution containing 10 µl of 10× PCR buffer (Perkin Elmer,
Norwalk, Conn.), 0.8 µl of 25 mM deoxynucleoside triphosphates (Promega), and 2.5 U of Taq polymerase (Perkin Elmer) with
1.0 mM 5' primer, 5'-CCCGCAGTAAAGAATTGGATGAC-3', and 1.0 mM
3' primer, 5'-ACTTCCAGCAGCCCTGTCTTCT-3'. Amplification was
for 24 cycles of 95°C for 30 s, 50°C for 30 s, and 72°C
for 3 min.
The PCR products were detected by liquid hybridization with
32P-labeled oligonucleotide probes for sequences internal
to the PCR product. Liquid hybridization was carried out in 40 µl of a solution containing 30 µl of PCR product, 10 µl of labeled probe in 1× Tris-EDTA buffer (10 mM Tris-HCl, 30 mM EDTA [pH 8.0]) at 94°C for 5 min followed by incubation at 55°C for 10 min. The antisense oligonucleotide probe for SIV gag was
5'-GTGTTGGAATTGTGGAAAGGAGGGA-3'. The hybridized products
were separated from the unincorporated material with a 10%
miniacrylamide gel. The isotopic signal was quantitated by stored
phosphor technology (Molecular Dynamics Corp., Sunnyvale, Calif.).
Differential nef RNA PCR assay.
A differential
PCR assay was developed to determine the presence of a full
nef sequence. The assay was designed to include a pair of
primers that bind outside of the 5' and 3' ends of the deletions
described by Kestler et al. (21). Sequences were obtained from the GenBank database. The reaction conditions were identical to
those described above. The paired primers were
5'-GATGGATATCTGCAATCCCCAGGAGGATTA-3' for the 5' end and
5'-TAAATCCCTTCCAGTCCCCCCTTTTC-3' for the 3' end. The
amplified product corresponds to a 299-bp length for the wild-type
nef gene and an approximately 166-bp product for the
nef deletion mutants. The amplified products were visualized by the liquid hybridization method described above with an antisense probe, 5'-GGGCTTGAGCTCACTCTCTTGTGAGGG-3'.
Virus neutralization assays.
Virus-neutralizing titers were
determined with cytopathic effect reduction assays. Cytopathic effect
reduction titers were determined as described by Montefiori et al.
(29, 30) for SIV and SHIV isolates.
Immunoblots.
SIVMne/E11s (5) was
grown in AA2 cells, clarified, and harvested by ultracentrifugation.
This virus has significant immunologic cross-reactivity to both
SIV239 and SIVPBj antigens. Pelleted virus was subjected to sodium dodecyl sulfate-gel electrophoresis and
then transferred to nitrocellulose by the method of Towbin et al.
(42). HIV-1 strips were obtained from a commercial source (Cambridge Biotech, Rockville, Md.). Immunoblots were probed with macaque plasma diluted to 1:100. Immune complexes were detected by a
goat anti-human IgG (Sigma) by the enhanced chemiluminescence system
(Amersham, Arlington Heights, Ill.) with Kodak XAR-5 X-ray film (Kodak,
Rochester, N.Y.).
 |
RESULTS |
Virus isolation and immune response following
SIV
nef immunization.
Two
nef-deleted viruses, SIV239
nef and
SIVPBj6.6
nef, were used to immunize two
different macaque species, rhesus and pigtailed, respectively. In each
virus, the nef gene was altered by deletion of a portion
coding only for the nef protein. Within 1 week following an
intravenous inoculation, virus was isolated from all the inoculated
animals (Table 1). The rhesus macaques receiving the SIV239
nef stock had moderate to high
levels of virus as assessed by numbers of positive cultures (Table 1) and circulating virus RNA levels (Fig.
1). Three of five animals (348, 354, and
356) remained culture positive throughout the period of immunization
(more than 80 weeks), while the remaining two animals (343 and 344)
were culture positive intermittently during the immunization period. Of
the three animals that remained culture positive throughout the
immunization period, all were positive for circulating SIV
gag RNA at the time of the challenge, and the number of
copies ranged from 102 to 103 per ml (Table
2). These results were in contrast to
those for the pigtailed macaques immunized with the
SIVPBj6.6
nef, of which only one animal had any
positive isolations after 20 weeks, three were isolation positive only
during the first 4 weeks of the immunization period, and none had
detectable SIV RNA in their plasma at any time during the
immunization period.

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FIG. 1.
Plasma RNA levels following immunization with
SIV239 nef. The lower limit of detection for the
assay was 200 copies/ml. The values on the y axis are
expressed as log10. Rhesus macaques infected with the
pathogenic molecular clone SIV239 produce 105
to 107 RNA copies/ml within 3 weeks of intravenous
challenge.
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To confirm that the immunized animals were infected with
nef-deleted virus, PCR assays were performed on DNA from
fresh PBMC
and RNA from viral pellets from virus-isolation-positive
culture
supernatants. The assay was designed to amplify the entire
nef gene and determine size differences. In all cases the
animals
were found to be infected with an isolate that was a
nef-deletion-containing
virus (data not
shown).
Humoral immune responses were detected in all animals within 3 weeks of
immunization; the level of antibody increased to moderate
to high
levels during the immunization period (Fig.
2). Immunoblot
analysis showed that all
animals developed broad responses that
included binding to all of the
major SIV proteins, while no antibody
cross-reactive to HIV-1
envelope proteins was observed by immunoblotting.
Some cross-reactivity
to HIV-1 p24 protein was observed (Fig.
3); however, this protein is not coded
for by the challenge virus.
Low-level cross-reactivity to HIV-1
envelope protein was observed
by ELISA (Table
3). Interestingly, the animals immunized
with
the SIV
PBj6.6
nef isolate generated higher
titers for the
HIV envelope protein than did the animals immunized with
SIV
239
nef.
As revealed by neutralization assays
performed on the day of challenge,
sera from the
SIV
239
nef-immunized animals were calculated
to have
titers against SIV
239 between 65 and 191 but were
uniformly
negative toward SHIV
89.6PD (Table
2). Although
all the SIV
PBj6.6
nef-immunized
animals had moderate
to high antibody titers, all were negative
for SIV
PBj
neutralization, and SHIV
89.6PD-specific neutralization
was
also found to be negative.

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FIG. 2.
Antibody responses following immunization with
attenuated virus and after challenge with SHIV89.6PD.
Levels of antibody are expressed as kinetic units (10 3 OD
units/min) on the y axis for each individual animal. Solid
symbols are data for animals immunized with attenuated virus. A,
responses of animals immunized with the SIVPBj6.6 nef
isolate; B, responses of animals immunized with
SIV239 nef. Open symbols are data for control
animals. The break in the x axis demarcates the period prior
to challenge (to the left) and that following challenge (to the right),
at week 92 p.i. for panel A and at week 86 for panel B.
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FIG. 3.
Immunoblot analysis of serum collected from
attenuated-virus-immunized animals on the day of challenge.
Reactivities to SIVmne/e11s-derived antigens (A) and
HIV-1IIIB-derived antigens (B) are shown.
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Virus isolation and immune response after SIV89.6PD
challenge.
SHIV89.6PD grows to high titers in vivo in
macaques following intravenous challenge, causing a rapid decline in
detectable number of circulating CD4+ cells in naive
macaques (34). We challenged the immunized macaques with 25 TCID50 of the SHIV89.6PD stock via the
intravenous route. These challenges were performed in the immunized
rhesus and pigtailed macaques at 86 and 92 weeks, respectively. Two
control animals per immunization group were also inoculated in a
similar fashion. All animals were monitored for virus isolation (Table
4) and circulating CD4+ cell
loss (Fig. 4). As expected, the controls
showed a rapid decline in circulating CD4+ cells by 2 weeks
p.i. (Fig. 4). This rapid decline was absent in all of the vaccinated
animals during the early follow-up period, even in those confirmed to
be infected with the SHIV89.6PD. An inguinal lymph node
biopsy specimen was collected at 2 weeks postchallenge from each
animal, and following the preparation of a single-cell suspension of
the tissues, virus isolation and lymphocyte subpopulation determinations were performed (Table 5).
The results confirmed the findings for the peripheral blood, except
that one animal, animal 2581, had SHIV isolated from the inguinal lymph
node biopsy specimen collected at 2 weeks but was never found to show
detectable circulating infected PBMC. The biopsy specimens from
immunized animals showed moderate or no change in % CD4 or CD4:CD8
ratio from prechallenge levels in lymph nodes. The controls had a
near-total loss of detectable CD4+ cells in the lymph nodes
by 2 weeks p.i. During the follow-up period, the infected control
rhesus macaques had a slow rebound in CD4+ cell numbers
(Fig. 4) and each developed moderate to high levels of SIV antibody
(Fig. 2). This was in contrast to the control pigtailed macaques that
had no recovery of CD4+ cells and developed few or no
SIV-specific antibodies.

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FIG. 4.
Levels of circulating CD4+ lymphocytes in
peripheral blood during the first 40 weeks following SHIV challenge.
Solid symbols are data for vaccinated animals, and open symbols are
data for control animals. A, levels for animals immunized with the
SIVPBj6.6 nef isolate; B, levels for animals
immunized with SIV239 nef.
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As detailed in Table
4, virus was isolated from the peripheral blood
cells of all of the animals in the SIV
239
nef
immunization
group by 1 week postchallenge; all of these isolates
contained
a
nef coding region, indicating an infection with
the SHIV. Four
of these five animals were persistently infected with a
nef-containing
virus at all time points following challenge.
Animal 344 was isolation
positive for a
nef-containing virus
for up to 6 weeks p.i. and
then became consistently isolation negative.
The two control animals
were isolation positive at all time points from
one week p.i.
until 36 weeks p.i., when macaque 1128 became
intermittently positive.
By week 16 p.i., animal 354 was showing
signs of significant CD4
+ cell loss, and this animal was
euthanized during week 28 p.i.
with lymphopenia, including a
circulating CD4
+ cell count of 4 cells per µl, anorexia,
and severe diarrhea.
Animal 356 was euthanized at week 56 with severe
pancreatitis
associated with a large abscess involving both the
pancreas and
spleen. Animal 348 was euthanized at week 79 with
anorexia, >50%
loss from starting weight, neutrophilia, a
CD4
+ cell count of 200/µl, and fibromatosis involving the
entire peritoneum.
This animal was tested at the time of necropsy for
the presence
of SRV and was found to be negative by serology and by
coculture
with Raji
cells.
The animals immunized with the SIV
PBj6.6
nef were all
virus isolation negative at the challenge time, although one, animal
2370, was isolation positive at the immediately previous time
point, 4 weeks before the challenge. Following the challenge with
SHIV
89.6PD, three of five animals showed a
nef-containing virus
within 1 week postchallenge. The
remaining two animals were negative
for virus isolation from the
peripheral blood throughout the postchallenge
period (Table
3). Animal
2581 had SHIV isolatable from the lymph
node at 2 weeks p.i. (Table
5)
but was never found to have SHIV
in circulating PBMC. All five
pigtailed macaques were negative
for circulating p27 at all time points
postchallenge. Two of the
four infected animals had virus isolations
during the 2 to 8 weeks
following the challenge and remained isolation
negative thereafter.
The count of CD4
+ lymphocytes declined
during the first week following challenge
for all animals, but that for
the immunized animals remained within
the normal range for pigtailed
macaques (Fig.
4). The two controls,
animals 1159 and 1235, became
consistently culture positive by
1 week p.i. and were p27 antigen
positive (0.14 and 1.64 ng/ml
of serum, respectively) at week 2. Their
circulating CD4
+ lymphocyte counts dropped to less than 10 cells/µl by week 3
(Fig.
4), and only low levels of antibodies were
detectable for
either animal (Fig.
2). The lymph node biopsy specimens
showed
a near-total loss of CD4
+ cells (Table
5). Monkey
1159 was euthanized at week 36 with
anemia and lymphopenia, including a
total loss of CD4
+ cells, severe neutrophilia, severe
wasting, and absence of detectable
circulating antibodies. Animal 1235 was euthanized during week
77 p.i. while being treated for a
staphylococcal septicemia. One
of the immunized animals, animal 2370, was considered persistently
infected and remained isolation positive at
most time points;
this animal died at week 24 with a pulmonary
thrombosis, with
no evidence of pneumonia and
infarction.
SIV RNA in plasma.
Circulating SIV gag RNA
was detected in three of the five
SIV239
nef-immunized animals and none of the five
SIVPBj6.6
nef-immunized animals at the time of
challenge (Table 2 and Fig. 5). Following challenge with the SHIV89.6PD, all three
SIV239
nef RNA-positive, immunized rhesus macaques
and one SIVPBj6.6
nef-immunized pigtailed macaque had
circulating viral RNA (Fig. 5) that contained an undeleted
nef gene. The assay results for the remaining animals were
all below the level of detection (<200 copies/ml). SIV RNA was
easily detected in all of the control animals by 1 week postchallenge, and these levels peaked by 2 to 4 weeks. The controls for both groups
had high levels of circulating RNA (>106 RNA copies/ml)
(Fig. 5). The overall levels were observed to be higher in the naive
pigtailed macaques than in the rhesus macaques. In addition, the
pigtailed macaques developed a higher sustained level of RNA, whereas
by 16 weeks postchallenge the levels for both control rhesus macaques
were at or near the lower limit of detection of the assay.

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FIG. 5.
Early plasma virus RNA levels following challenge with
SHIV89.6PD. The lower limit of detection for the assay was
200 copies/ml. Solid symbols are data for vaccinated animals, and open
symbols are data for control animals. A, levels for animals immunized
with the SIVPBj6.6 nef isolate; B, levels for animals
immunized with SIV239 nef. The values on the
y axis are expressed as log10.
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DISCUSSION |
This study was initially designed to determine the breadth and
limits of protection associated with the immunity developed following
immunization with attenuated lentiviruses. To achieve this we chose to
challenge with a pathogenic SHIV that contained an HIV-1 envelope and
the SIV239 gag-pol. This SHIV isolate
contains the envelope gene from the HIV-189.6 isolate,
which is classified as a primary isolate with dual tropism for both
lymphocytes and monocytes as defined by recent studies by Rucker et al.
(36) showing that it can bind the CCR2b, CCR3, CCR5, and
CXCR4 coreceptors. Following in vivo passage a highly pathogenic SHIV,
SHIV89.6PD, was isolated (34, 35). The choice of
a SHIV as a challenge virus for our study was made due to the recent
finding that attenuated-virus immunization could very effectively
protect animals from infection with homologous strains of SIV and
nonpathogenic SHIV without any obvious correlate of protection (2,
9, 13, 27, 31, 37, 38, 47). Additional studies involving passive
transfer of antibodies generated following immunization and the removal of CD8+ lymphocytes by monoclonal antibodies have also been
inconclusive as to their protective values (3, 39).
Currently no definitive correlation has been made as to the means of
protection, leading some investigators to speculate that the protection
may be due to nonspecific immunity or to viral interference
(31).
Our goal for this study was to determine if attenuated virus could
protect against a pathogenic virus containing a highly diverse envelope
and, if protection was observed, whether it could be attributed to
specific immunity. In addition, we were interested in determining if
animals that were not protected from infection had an altered disease
course. We chose to use two attenuated isolates,
SIV239
nef and SIVPBj6.6
nef, to
compare differences in growth and immunizing potential. The SHIV
challenge virus contains the gag-pol portion of the
SIV239 isolate, so that the
SIV239
nef is totally homologous in sequence to the
gag-pol portion of the challenge virus, while the
SIVPBj isolate varies up to 10% in the
gag-pol region. The findings of this study demonstrate that the immunizing attenuated viruses stimulated effective broadly protective responses in some animals. These responses do not appear to
induce a sterilizing immunity, except in the case of animal 2580, but
appear to be very effective at blocking the acute pathogenicity of the
SHIV89.6PD. The mechanism of protection is unlikely to be
associated with specific envelope antibodies since the SHIV envelope is
highly diverse and neutralizing antibodies were absent at the time of
challenge. This corroborates the findings of Almond et al.
(3), which showed that passive antibody treatments with immune serum from attenuated-virus-immunized animals did not protect from homologous pathogenic challenge, and of Langlois et al.
(23), which showed that sera from attenuated-virus-immunized
macaques failed to neutralize the challenge viruses. In addition, the
protection does not appear to be associated with a viral receptor
interference mechanism (45), since the animals that were
replicating virus at a high level at the time of challenge were more
susceptible to SHIV infection and disease than others that had little
or no documented virus replication. This is emphasized by our finding that the immunizing virus SIVPBj6.6
nef, which had
limited growth potential in the immunized macaques, was more protective than the more-efficiently growing SIV239
nef. The
protective responses observed may be associated with
gag-specific responses or possibly with nonspecific immune
responses, such as the presence of
-chemokines or interferons. These
responses are not sufficient to inhibit infection with the challenge
virus but may act to decrease and possibly block its spread.
The results presented indicate that although the immunizing viruses are
attenuated in phenotype, they are not totally avirulent in all hosts.
Previous studies by Whatmore et al. (46) have shown that
nef deletion does not eliminate pathogenicity in
macaques. More recently, even a triple-deletion mutant has been shown
to cause some pathology in neonates (4, 48). Our
results support this finding, in that some immunized animals
failed to control the attenuated virus. This is highlighted by the very
effective protective responses observed in most
SIVPBj6.6
nef-immunized animals as contrasted to
the SIV239
nef-immunized group, which appear to
be related to the overall growth of the immunizing virus. As was
observed, the SIVPBj6.6
nef as the immunizing virus was effectively controlled in all but one animal following the early
period of immune development. In addition, the circulating RNA
from the SIVPBj6.6
nef was not detected in any
animals during the immunization period. These animals very effectively blocked the SHIV infection and/or growth; one in five was completely protected and three in five controlled the SHIV after challenge. The
SIVPBj6.6
nef isolate has been used to infect an
additional 15 animals, and circulating RNA was detected in only 1 animal, at a level of 103 RNA copies/ml, during the early
infection (data not shown). This indicates that the isolate is
significantly more attenuated than its wild-type parent strain, which
grows to high levels in pigtailed macaques (24, 32). This is
in contrast to the observations that all
SIV239
nef-immunized animals had circulating viral RNA following immunization and that three of these five animals were
unable to control virus growth during the >80-week period of
immunization. Following challenge, all three of these
SIV239
nef-immunized animals failed to control the
SHIV infection and all died prior to the controls, suggesting an
enhanced disease course due to undetected immune system damage caused
by the immunizing virus.
The variation of the responses in the two types of macaques, rhesus and
pigtailed, towards the challenge virus is of interest. These macaques
are commonly used in SIV and/or SHIV research, and the pigtailed
macaque has been shown to be more susceptible to most SIV and some
HIV-1 isolates than the rhesus macaque (1, 14, 17, 24).
These studies indicate that this is also the case for the
SHIV89.6PD isolate. The virus infected both macaque types,
and the patterns of early growth and pathogenicity are similar, with
rapid virus growth and a rapid loss of circulating and tissue
CD4+ cells. Overall differences can be observed beginning
at the early time points, when higher virus loads are observed in the
pigtailed macaques. By a few months postchallenge the differences
become quite apparent, with CD4+ cells returning,
antibodies developing, and virus RNA levels dropping in the control
rhesus macaques, while the pigtailed macaques had no apparent
CD4+ cell rebound or humoral response toward the virus. The
control pigtailed macaques regained few, if any, circulating
CD4+ cells and generated only minimal levels of SHIV
antibodies, and both controls died during the study period. This
indicates that the SHIV89.6PD isolate is more pathogenic in
pigtailed macaques and makes the observed protective responses induced
by the SIVPBj6.6
nef even more significant.
Use of attenuated HIV constructs has recently been proposed for
inclusion in human clinical trials (8). The specific
constructs would have deletions additional to those in the viruses
reported here. Each additional mutation has been shown to cause the
virus to grow less efficiently and to induce a diminished immune
response (13). Our findings suggest that a window of
opportunity exists for a safe and effective attenuated-lentivirus
vaccine to work. This window is limited first by the potential of the
immunizing virus to cause damage to the immune system and second by the
level of the immunity generated following vaccination. The width of this opening is currently unknown. Our findings indicate that single-deletion mutants should not be used, due to the potential for
the immunizing virus to cause immune system damage and the potential for enhanced disease upon contact with a pathogenic virus.
The findings of Baba et al. (4) and Wyand et al.
(47) indicate that the deletions of nef,
nre, and vpr do not eliminate the potential
safety problems in neonatal macaques, and this phenomenon could also
apply to immunosuppressed or immunocompromized individuals. Desrosiers
et al. (13) have developed mutants with four and five
deletions, each having the expected loss in growth potential in vitro.
When a four-deletion mutant was used in vivo, it generated low-level
infections with low or nondetectable immune responses (13).
Protection studies involving the four-deletion mutant have not been
reported in macaques to date, but the limited immune response developed
suggests that it will not generate sufficiently high levels of
protection. The five-deletion mutant failed to attain measurable growth
in vitro. These studies indicate that additional methods of attenuation
or combinations of deletions should be tested and that their potential
use in developing vaccine candidates should be scrutinized for both
safety and generated immunity in animal models prior to their use in humans.
 |
ACKNOWLEDGMENTS |
We thank Ronald C. Desrosiers of the New England Primate Center
for supplying the SIV239
nef isolate, Frank Novembre
of the Yerkes Primate Center for supplying
SIVPBj6.6
nef, and David Montefiori of Duke
University for performing the virus neutralization assays reported in
these studies.
These studies were sponsored by a Department of the Army cooperative
agreement, DAMD17-93-V-3004.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Henry M. Jackson
Foundation, 1600 E. Gude Dr., Rockville, MD 20850. Phone: (301)
217-9410. Fax: (301) 762-7460. E-mail: mlewis{at}hiv.hjf.org.
Present address: Social & Scientific Systems, Inc., Rockville,
MD 20852.
 |
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Journal of Virology, February 1999, p. 1262-1270, Vol. 73, No. 2
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
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