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Journal of Virology, November 1999, p. 9348-9361, Vol. 73, No. 11
Departments of Microbiology and Medicine and
Howard Hughes Medical Institute, University of California, San
Francisco, California 94143
Received 21 May 1999/Accepted 2 August 1999
Kaposi's sarcoma (KS)-associated herpesvirus (KSHV) is a
lymphotropic virus strongly linked to the development of KS, an
endothelial cell neoplasm frequent in persons with AIDS. Reactivation
from latency in B cells is thought to be an important antecedent to viral spread to endothelial cells during KS pathogenesis. Earlier experiments have posited a role for the transcriptional activator encoded by KSHV open reading frame 50 (ORF50) in such reactivation, since ectopic overexpression of this protein induces reactivation in
latently infected B cells. Here we have explored several aspects of the
expression, structure, and function of this protein bearing on this
role. The ORF50 gene is expressed very early in lytic reactivation,
before several other genes implicated as candidate regulatory genes in
related viruses, and its expression can upregulate their promoters in
transient assays. The protein is extensively phosphorylated in vivo and
bears numerous sites for phosphorylation by protein kinase C,
activators of which are potent stimulators of lytic induction. The C
terminus of the ORF50 protein contains a domain that can strongly
activate transcription when targeted to DNA; deletion of this domain
generates an allele that expresses a truncated protein which retains
the ability to form multimers with full-length ORF50 and functions as a
dominant-negative protein. Expression of this allele in latently
infected cells ablates spontaneous reactivation from latency and
strikingly suppresses viral replication induced by multiple stimuli,
including phorbol ester, ionomycin, and sodium butyrate. These results
indicate that the ORF50 gene product plays an essential role in KSHV
lytic replication and are consistent with its action as a putative
molecular switch controlling the induction of virus from latency.
Kaposi's sarcoma (KS)-associated
herpesvirus (KSHV; also called human herpesvirus 8) has been
established as a key factor in the pathogenesis of both AIDS-related
and classical KS (10, 49). KS is a complex neoplasm
characterized by marked hyperplasia of spindle cells of endothelial
lineage and striking concomitant neoangiogenesis (45).
Taxonomically, KSHV belongs to the gamma, or lymphotropic, subfamily of
herpesviruses (46). Consistent with this fact, in the
peripheral blood of KS patients, viral DNA is found principally in
CD19+ B cells (1, 56) (and possibly other
mononuclear cells) (7); KSHV is also intimately associated
with diseases of abnormal lymphoproliferation, including multicentric
Castleman's disease and primary effusion lymphoma (12, 52).
Infection by KSHV precedes KS development, with latent infection being
established well before progression to full-blown disease (37,
39). In KS tumors, viral DNA resides primarily in endothelial
lineage-derived spindle cells (9, 53).
Although KSHV infection of spindle cells is predominantly latent, two
lines of evidence support the inference that active, lytic viral
replication is also important in KS development. First, treatment of
AIDS patients at risk for KS with ganciclovir, a drug which blocks
lytic but not latent KSHV replication, strikingly decreases the
incidence of KS development (36). Second, the viral load in
peripheral blood mononuclear cells increases with progression to
clinical KS (1, 56). Taken together, these findings suggest
that reactivation from latency and subsequent lytic replication are
important events in KS pathogenesis. Such events would be expected to
be augmented by AIDS and likely represent an important part of the
mechanism underlying the association between human immunodeficiency
virus infection and KS.
Lytic reactivation can be envisioned to relate to KS pathogenesis in at
least two ways. First, since KSHV is a lymphotropic virus but KS is an
endothelial cell neoplasm, viral reactivation within and dissemination
from the lymphoid reservoir must occur in order to recruit endothelial
cell targets. Second, the KSHV genome encodes numerous homologues of
cellular signaling molecules; many of these genes are expressed as
lytic cycle genes (28, 40, 46, 48, 54). Several such
genes (e.g., those encoding viral macrophage inflammatory protein II
and viral G-protein-coupled receptor) have been shown to promote
neoangiogenesis (2, 4, 8) Although the molecular events in the reactivation of latent KSHV are
just beginning to be understood, considerable insight has been gained
from the study of similar issues for the distantly related Epstein-Barr
virus (EBV). A critical event in the reactivation of EBV is the
expression of the Zta (also called Z or Zebra) protein, a known
transcriptional activator. The central role of Zta in reactivation was
established by a number of experimental findings: (i) ectopic
expression of Zta triggers lytic reactivation in B cells
(15); (ii) Zta mRNA is one of the first viral mRNAs
expressed after reactivation in latently infected B cells (reviewed in
reference 38); (iii) Zta can activate expression
from delayed-early (DE) EBV promoters required for viral DNA
replication (14, 26, 27, 50); and (iv) a dominant-negative
variant of Zta called RAZ inhibits lytic reactivation (20).
Significantly, EBV also expresses a second immediate-early (IE)
protein, termed Rta (or R), but Rta had until recently not been
considered a likely switch protein in B cells for the following reasons: (i) overexpression of Rta with a weak promoter does not stimulate reactivation of latent EBV (16); and (ii) Rta
appears to be a downstream target of Zta transactivation (19, 29, 30, 51). However, Rta overexpression can reactivate EBV in an
epithelial cell model of latency (57), and a recent report demonstrated that forced expression of Rta from a stronger promoter can
reactivate latent EBV in B cells (43). These results
indicate that even in B cells, EBV Rta can occasionally function as a
switch protein or that it is a key downstream effector of switch
protein action.
KSHV expresses proteins with distant amino acid homology to the EBV
lytic transactivators Zta, Rta, and M; these proteins are encoded by
the K8, open reading frame 50 (ORF50), and ORF57 loci, respectively
(46). One or more of these are likely candidates for switch
proteins involved in the control of lytic reactivation. We
(34) and others (55) have recently shown that the
KSHV Rta homologue (ORF50) can induce markers of lytic reactivation in
B-cell models of KSHV latency. Our model system includes the PEL cell
line BCBL-1, which harbors the viral genome in a latent state. Upon
treatment with inducing agents, such as
12-O-tetradecanoylphorbol-13-acetate (TPA) or sodium
butyrate, the lytic gene cascade is induced, culminating in viral
replication, cell lysis, and release of virions (44). Ectopic expression of ORF50 in BCBL-1 cells (34) (or in BC-1 cells [55]) induces the expression of DE (ORF59) and
late (K8.1) lytic cycle proteins and cytopathic effects in a manner
quantitatively similar to that of phorbol ester treatment. We have also
demonstrated that ORF50 is a nuclear protein that can directly
transactivate KSHV DE but not late promoters (34).
These findings suggest that this gene product may be a key switch
protein in KSHV lytic reactivation. However, because the key
experiments implicating ORF50 involve artificial overexpression of the
ORF50 gene, we sought additional evidence that would support a role for
the protein in this process. Here we demonstrate that the expression of
the ORF50 mRNA is significantly upregulated before the onset of
expression of the major Zta (K-bZIP) and M (ORF57) homologues. In
accordance with these induction kinetics, we demonstrate that ORF50 can
strongly activate the promoters of K-bZIP and ORF57 in a dose-dependent
manner. The ORF50 protein is heavily phosphorylated and bears numerous
consensus sites for phosphorylation by protein kinase C, activators of
which are potent inducers of KSHV lytic replication. By identifying a
strong carboxy-terminal activation domain in the protein, we have been
able to construct a dominant-negative ORF50 allele. Expression of this
allele in BCBL-1 cells ablates spontaneous lytic reactivation and
strongly inhibits the induction of KSHV replication by other known
inducers (e.g., TPA, ionomycin, and sodium butyrate). These data
provide conclusive evidence that the ORF50 protein is essential for the reactivation of KSHV in B cells and are consistent with the suggestion that it is a molecular switch.
Plasmids.
All plasmids were propagated as described
previously (34).
0022-538X/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Transcriptional Activation by the Product of Open
Reading Frame 50 of Kaposi's Sarcoma-Associated Herpesvirus Is
Required for Lytic Viral Reactivation in B Cells
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ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
one of the signature features of
KS histology
in a paracrine fashion. Since a small percentage of KS
spindle cells have been shown to support the lytic cycle (53,
54), local reservoirs of such paracrine factors exist in the
tumor and could contribute directly to the angiogenic and inflammatory
components of the lesion. Thus, understanding the mechanisms involved
in the reactivation of KSHV from latency is important for a full
understanding of the natural history of KSHV infection.
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MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
STAD expresses amino acids (aa) 1 to 530 of ORF50
fused C terminally to three copies of the simian virus 40 (SV40) large
T antigen nuclear localization signal (NLS) and a myc
epitope tag. A PCR product spanning nucleotides (nts) 1 to 1590 of
ORF50 was digested with EcoRV and XhoI (which had
been introduced by the primers) and cloned into pCMV-myc-nuc
(Invitrogen) that had been digested with NcoI, Klenow
fragment blunted, and then digested with XhoI. pV5-50
STAD
expresses the same truncation of ORF50 fused C terminally to the V5
epitope and a histidine tag. The plasmid was generated by cloning the
same PCR product as that used above into the
EcoRV/XhoI sites of pcDNA3.1/V5-His A
(Invitrogen). pGem3-50
STAD expresses aa 1 to 514 of ORF50 in rabbit
reticulocyte lysates (RRL). A PCR product spanning nts 1 to 1552 of
ORF50 was digested with EcoRV and SalI (which had been introduced by the primers) and cloned into pGem3 that had been
digested with the same enzymes. The 3' primer introduced an in-frame
stop codon as well.
N-terminal fusions to the Gal4 DNA binding domain were made with
plasmid pSG0 (18) (see Fig. 5A for diagrams of polypeptides expressed from each). pSG-C50 was constructed by subcloning the 3'
ORF50 XmnI/SalI fragment into pSG0 that had been
digested with SmaI and SalI. pSG-FL50
Bam was
constructed by inserting the BamHI/XbaI fragment
of pcDNA3-FLc50 into pSG0 that had been digested with the same enzymes.
pSG-FL50
STAD was constructed by generating a PCR product spanning
nts 1 to 1590 of the ORF50 cDNA; the primers introduced 5'
EcoRV and 3' SalI sites. The fragment resulting from digestion with these enzymes was cloned into pSG0 that had been
digested with SmaI and SalI. pSG-FL50 was
constructed by inserting the EcoRV/BamHI fragment
from the above-described PCR product into pSG-FL50
Bam that had been
digested with SmaI and BamHI.
pcDNA3-gZ was cloned by digesting pBS-3.9 with SacI,
blunting with T4 DNA polymerase, and digesting with KpnI.
The resulting 3.7-kb fragment was inserted into pcDNA3 that had been
digested with KpnI and EcoRV. pBS-Z-LZ was cloned
by removing the HindIII/PstI fragment
(containing exon 3 of K-bZIP) and cloning it into pBluescript II KS(+)
that had been digested with the same enzymes.
KSHV DE reporter plasmids pGL3-TK, pGL3-pol, pGL3-DBP, and pGL3-nut1
were all described elsewhere (34). pORF57-GL3 contains the
BamHI/ApaLI fragment from upstream of ORF57
cloned into pGL3-basic (Promega). pK-bZIP-GL3 contains the 0.7-kb
SacI/AflIII fragment from upstream of K8 cloned
into the SacI/MluI sites of pGL3-basic.
pGal4-tk-luc contains five binding sites for Gal4 linked to the herpes
simplex virus thymidine kinase (TK) TATA box in pGL3-basic.
pnut24 and pcDNA3.1lacZ were described elsewhere (34).
All PCR-generated plasmids were sequenced to confirm that no mutations
had been introduced.
Cell lines and transfections. The cell line BCBL-1 was propagated and maintained as described previously (44). Electroporations were performed as described previously (34) but with the following modifications. After one wash in phosphate-buffered saline (PBS), cells were resuspended in unsupplemented minimal RPMI 1640 medium at a density of 2.2 × 107 cells/ml. Cell volumes of 0.45 ml were placed in electroporation cuvettes (0.42 cm), and DNA was added. Cells were electroporated at 960 µF and 200 mV and then transferred to 20 ml of complete RPMI medium. For induction experiments, 20 µg of the putative inducing plasmid and 4 µg of pnut24 were electroporated.
The B-cell lymphoma cell line BJAB was propagated, maintained, and transfected in a manner similar to that used for BCBL-1 cells, except for the use of 960 µF and 250 mV. The human diploid endothelial cell line SLK (25) was propagated, maintained, and transfected as described previously (47). For each transfection, 1 µg of reporter plasmid and 1 or 2 µg of transactivator were used. CV-1 cells were propagated, maintained, and transfected as described previously (34). Cos-7 cells were propagated and maintained similarly. In all transient transfection experiments, pcDNA3 was used as a filler plasmid to normalize total DNA per transfection. pcDNA3.1lacZ, expressing
-galactosidase, was included in each transfection as an
internal control. Data reported are representative of more than one
experiment with each transfection performed in triplicate.
Luciferase and
-galactosidase assays.
For the BJAB cell
line, cells were collected by centrifugation, washed once with 10 ml of
PBS, and washed once with 1.4 ml of PBS. The pellet was resuspended in
0.2 ml of reporter lysis buffer (Promega), debris was spun out, and the
extracts were transferred to new tubes. Extracts for SLK and CV-1 cells
were prepared as described previously (34). BJAB, CV-1, and
SLK extracts were analyzed as described previously (34).
Northern blotting. Total RNA from BCBL-1 cells was purified as described previously (28). The Northern blot data reported here represent RNA from a single induction, separated on one of three gels prepared in triplicate. A 15-µg quantity of total RNA per time point was blotted and hybridized as described previously (28). Blots were sequentially probed for transcripts, and representative results are reported.
Specific information concerning the double-stranded (ds) probes can be obtained by contacting the authors. Single-stranded probes were generated and hybridized as described previously (28). Sense K-bZIP transcripts were detected with an antisense probe transcribed from the NarI/HindIII fragment of exon 3. Sense ORF50 transcripts were detected with an antisense probe transcribed from the 5' exon 2 SacI fragment; antisense ORF50 transcripts were detected with a sense probe transcribed from the same fragment.cDNA cloning. A cDNA library prepared from lytically induced BCBL-1 cells (58) was probed with four ORF50 probes (three 5' probes and one 3' probe; contact the authors for specific information); probe synthesis and hybridization were performed as for ds probe Northern hybridization (see above). Three rounds of plaque purification were performed before sequencing of rescued phagemids.
RACE. 5' RACE was performed with a 5'/3' RACE kit (Boehringer Mannheim Biochemicals) in accordance with manufacturer recommendations. Briefly, total cellular RNA was isolated from BCBL-1 cells which had been stimulated with TPA for 12 or 48 h. Reverse transcription was performed with a 25-base oligonucleotide proceeding antisense beginning at nt 73030. The resulting cDNAs were purified with QiaQuick columns (Qiagen). Two successive rounds of PCR were performed with an oligo(dT) anchor primer with nested ORF50-specific primers. Products were cloned by using an AdvanTAge PCR cloning kit (Clontech), and 31 products were sequenced.
S1 nuclease assays.
Total RNA was isolated from BCBL-1 cells
stimulated with TPA for 48 h or from BJAB cells. An S1 assay kit
(Ambion) was used in accordance with manufacturer recommendations. RNA
(10 µg) was hybridized to 105 cpm of a 50-base
oligonucleotide which spanned either the ORF50 start site at nt 71560 or the splice acceptor at nt 72572. Probes were end labelled with
[
-32P]ATP and T4 polynucleotide kinase, and
hybridization was carried out overnight at room temperature. Digestions
were performed with 1:200 dilutions of the supplied S1 nuclease.
Products were visualized by separation by 10% denaturing gel
electrophoresis. Sequencing ladders for sizing were generated with a
Thermo-Sequenase kit (Amersham).
Primer extension. Total RNA was prepared as described above, and primer extension reactions were performed as described previously (3). The antisense primer used was a 35-mer oligonucleotide starting at nt 72797 or a 40-mer oligonucleotide starting at nt 72830. RNA (10 µg) was hybridized with the oligonucleotides at 56°C for 5 min. Reverse transcription was carried out for 1 h at 42°C with 5 U of avian myeloblastosis virus reverse transcriptase (RT; Boehringer). Products were separated by 10% denaturing polyacrylamide gel electrophoresis (PAGE). Sequencing ladders were prepared as described above.
RT PCR. Total RNA was isolated from BCBL-1 cells (28). After treatment with RNase-free DNase, RNA was precipitated, and 2 µg was annealed to 25 ng of an antisense 21-nt oligonucleotide (whose 5' end was at nt 74675). Annealing was performed as in the primer extension protocol (see above), except for a 15-min incubation at 65°C. The RT reaction was performed for 1 h at 55°C with 16 U of avian myeloblastosis virus RT. A control reaction was performed in tandem under the same conditions but without the RT. Products were purified with QiaQuick columns. PCRs were carried out with each of three templates and four different primer pairs. The templates were pcDNA3-FLg50, total RNA with RT, and total RNA without RT. The primer pairs were as follows (with the 5' nucleotide of the 5' primer first, followed by the 5' nucleotide of the 3' primer; specific sequences can be obtained from the authors): pair 1, 71560-72886; pair 2, 72686-73339; pair 3, 73315-73958; and pair 4, 73936-74675. Each template (1 µl) was mixed with each primer pair (50 µM), and PCR was performed for 40 cycles of 94°C for 1 min, 47°C for 1 min, and 72°C for 2 min. One microliter of each genomic product and 6 µl of each total RNA product were visualized by electrophoresis on a 2% agarose gel with ethidium bromide staining. Products were TA cloned and sequenced to confirm sequences.
SDS-PAGE analyses of cellular extracts. Cos-7 cells were transfected with various plasmids by use of Lipofectamine (Gibco/BRL) in accordance with manufacturer suggestions. At 48 h posttransfection, cells were harvested in 10s buffer (11) supplemented with protease inhibitor cocktail set III (Calbiochem). Extracts were diluted 1:5 in 5× Laemmli sample buffer, boiled for 5 min, and then separated by sodium dodecyl sulfate (SDS)-PAGE.
BCBL-1 or BJAB cells were treated with TPA (34) for 24 h or left untreated, and extracts were prepared and analyzed as described above.Alkaline phosphatase treatment of cellular extracts. Cellular extracts were prepared as described above, dialyzed, and treated with 40 U of alkaline phosphatase (Boehringer) in a buffer supplied by the manufacturer (5). Control reactions received only the buffer. After 2 h at 37°C, extracts were diluted 1:5 in 5× Laemmli sample buffer and separated on SDS-8% polyacrylamide gels. RRL-generated ORF50 was also electrophoresed on the same gels. ORF50 protein was detected by Western blotting.
Coimmunoprecipitations.
For coimmunoprecipitations, pcDNA3,
pcDNA3FLg50, and pV5-50
STAD were cotransfected into Cos-7
cells in various combinations (all transfections contained a total of
10 µg of DNA), and cells were harvested as described above. One
eighth of each extract was removed and used to identify input proteins.
Equal volumes of extracts were incubated with anti-V5 antibody
(Invitrogen) for 2 h at 4°C with rotation. Forty microliters of
protein A-Sepharose (Sigma; 50% solution preequilibrated in 10s
buffer) was added, and incubation was continued for 1 h. Beads
were washed three times with 0.5 ml of 10s buffer and boiled in Laemmli
sample buffer, and immunoprecipitated proteins were detected by Western
blotting of SDS-polyacrylamide gels with anti-ORF50 serum
(34) or horseradish peroxidase-conjugated anti-V5 antibody
(V5 is a 14-amino-acid epitope from P/V proteins of paramyxovirus SV4).
STAD were transcribed
and translated with a TNT T7 Quick coupled transcription-translation kit (Promega) in various combinations. All reactions contained a total
of 2 µg of DNA, and L-[35S]methionine was
included to label the translated products. Following incubation, 1/15th
of each lysate was removed and used to identify input polypeptides. The
remaining lysates were each brought to 0.15 ml in 1× NETN (20 mM Tris
[pH 7.5], 100 mM NaCl, 1 mM EDTA, 0.5% Nonidet P-40) supplemented
with protease inhibitors. Four microliters of anti-ORF50 serum
(34) was added, lysates were rotated at 4°C for 2 h,
and protein A beads (equilibrated in NETN) were added. Beads were
washed five times with 0.5 ml of NETN and boiled in Laemmli sample
buffer, and immunoprecipitated proteins were displayed on SDS-8%
polyacrylamide gels. Gels were fixed for 30 min, treated with Amplify
(Amersham) for 1 h, dried, and then analyzed by autoradiography.
IVT-T. For in vitro transcription-translation (IVT-T) of unlabelled proteins, we used the TNT T7 Quick coupled transcription-translation kit with unlabelled methionine substituted for labelled methionine.
Western blotting. Following electrophoresis, proteins were transferred to nitrocellulose (Schleicher & Schuell) in an electroblotter (Bio-Rad) containing 25 mM Tris base-190 mM glycine-20% methanol. Following transfer, the membrane was probed with anti-ORF50 serum (diluted 1:5,000) (34), anti-Gal4 DNA binding domain antibody (diluted 1:100; antibody RK5C1; Santa Cruz), or anti-c-myc antibody (diluted 1:1,000; Covance); the secondary antibody was detected with an ECL kit in accordance with manufacturer recommendations (Amersham). Washes were performed with PBS-0.05% Tween 20.
Transfection and induction of BCBL-1 cells. Experiments with TPA- or ionomycin-stimulated cells were analyzed by immunofluorescence as described previously (34) at 72 h postelectroporation. Experiments with sodium butyrate-stimulated cells were analyzed at 36 h postelectroporation.
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RESULTS |
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Multiple, divergent transcripts are expressed from the ORF50 locus. To begin our comparative analysis of the kinetics of the expression of potential regulators of KSHV reactivation, we first analyzed transcripts of the ORF50 locus (Fig. 1A). In an initial Northern blot analysis of total RNA isolated from BCBL-1 or BC-1 cells (data not shown), we used a ds (non-strand-specific) probe derived from a segment of the ORF50 coding region. This analysis revealed a doublet of mRNAs in the 3.4- to 3.8-kb range, as well as several minor transcripts. All species were upregulated with identical kinetics by TPA and sodium butyrate (data not shown). To identify which transcripts had coding potential for ORF50, we performed Northern blotting with single-stranded probes and total RNA from uninduced or TPA-induced BCBL-1 cells. The right panel of Fig. 1A shows that only one of the transcripts produced from this locus corresponds to sense RNA; this transcript is approximately 3.6 kb long and is upregulated by TPA. The remainder of the transcripts, including a very abundant transcript of ca. 3.4 kb and three minor RNAs of ca. 7.5, 2.0, and 1.3 kb, are transcribed from the antisense DNA template (Fig. 1A, left panel). Both the sense transcript and the major antisense transcript are weakly expressed in uninduced cells, likely because of the small percentage of BCBL-1 cells which spontaneously undergo lytic reactivation (1 to 3%). Currently, we do not know if the antisense transcripts have a coding function or serve in another (e.g., regulatory) capacity.
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Kinetics of ORF50 expression. An important predicted property of any putative switch protein is an onset of expression extremely early in the lytic cycle. Most such proteins are encoded by IE genes, classically defined by mRNA expression in the absence of protein synthesis. Two recent analyses of KSHV expression in induced BC-1 cells in the presence of cycloheximide (CHX) concluded that ORF50 mRNA accumulation was resistant to CHX inhibition (54, 59) and assigned the gene to the IE class on that basis. Using BCBL-1 cells, we (43a) and others (59) have been unable to find any KSHV mRNA that stably accumulates after treatment with CHX, even at low drug concentrations, perhaps owing to the pronounced cytotoxicity of the drug in this cell line. Because of this finding, we opted to simply examine the kinetics of ORF50 expression in the absence of protein synthesis inhibitors.
Accordingly, we prepared Northern blots of total RNAs from untreated or TPA-induced BCBL-1 cells at 1, 4, 8, 12, and 24 h postinduction and hybridized these RNAs to probes for the viral genes shown in Fig. 1B. This experiment revealed that the sense ORF50 transcript is easily detected within 1 h of TPA treatment and is abundantly expressed prior to the detectable expression of transcripts corresponding to ORF57, K-bZIP, K3, K5, and the known DE gene for DNA binding protein (DBP). Cellular glyceraldehyde-3-phosphate dehydrogenase served as a loading control and was unchanged at all time points. This very early expression of ORF50 RNA is consistent with its assignment as an IE gene; together with the known ability of ORF50 to directly transactivate the DBP promoter and other DE promoters (34), these data can account for the kinetics of DE gene expression. The order of expression of the K-bZIP, ORF57, K3, and K5 genes (which are the KSHV homologues of known IE genes of other herpesviruses) also raises the possibility that the prior expression of ORF50 may augment the expression of these genes as well (see Discussion). Sun and colleagues (54) have found a similar temporal relationship between ORF50 and K-bZIP upregulation in BC-1 cells; taken together with our data, these data suggest that the order of expression of these two genes in KSHV infection is opposite that in EBV infection.Fine structure of ORF50 mRNA. In our initial attempts to isolate a cDNA clone for ORF50, we screened an oligo(dT)-primed cDNA library prepared from TPA-induced BCBL-1 cells. From this experiment, we obtained no full-length clones: the longest cDNA (Fig. 2A) extended from a canonical poly(A) site at nt 76714 to nt 74025. This cDNA represented a transcript with four exons; the splice donor and acceptor sites are identical to the splice signals recently described as part of the K-bZIP transcript (22, 33). This finding confirms an earlier report that K-bZIP RNA sequences can be found in a bicistronic arrangement with ORF50 RNA sequences as well as in a monocistronic mRNA (22, 33).
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The ORF50 polypeptide is highly phosphorylated in mammalian cells. To characterize the polypeptide produced by ORF50, we transfected CV-1 and Cos-7 cells with either an empty expression vector or vectors expressing ORF50 from either a cDNA clone or a genomic fragment. A comparison of the proteins expressed from the ORF50 vectors revealed no obvious difference in mobility analyzed by Western blotting after SDS-PAGE (data not shown). However, Fig. 3A shows that the apparent molecular mass of the ORF50 polypeptide in these analyses is approximately 110 kDa, about 36 kDa higher than the predicted molecular mass of 73.7 kDa. In addition, when the cDNA is transcribed and translated in RRL, the apparent molecular mass is approximately 90 kDa (Fig. 3A). These observations suggest that the ORF50 polypeptide may be altered posttranslationally, resulting in its reduced apparent mobility in denaturing electrophoresis.
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The ORF50 protein can function in many cell types and can directly
transactivate the promoters of ORF57 and K-bZIP.
Since ORF50
expression precedes that of the other putative IE activators of gene
expression (ORF57 and K-bZIP) in lytic induction (Fig. 1), we were
interested in examining whether its product could directly activate the
promoters of those genes. Figure 4A demonstrates that ORF50 strikingly upregulates the promoters of both
ORF57 and K-bZIP in transient cotransfections of CV-1 cells. This
effect is dose dependent, with the magnitude of the activation reaching
150- to 250-fold
much greater than the 10- to 40-fold that we
typically observe for classical KSHV DE genes (e.g., DBP, TK and
nut-1 [34]). This ability to directly
upregulate the promoters of these regulatory viral genes is highly
consistent with the observed kinetics of appearance of their
transcripts after TPA stimulation of BCBL-1 cells.
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The ORF50 protein contains a potent carboxy-terminal activation
domain.
To gain insight into the mechanism of transactivation of
ORF50 and the function of ORF50 as a lytic switch in KSHV reactivation, we mapped the activation domain of the protein by fusing various regions of the ORF50 polypeptide downstream of the DNA binding domain
of the yeast protein Gal4. The regions of the ORF50 polypeptide that
were fused are shown in Fig. 5A. These
ORF50 variants included full-length (FL) ORF50, two amino-terminal
truncations (FL50
Bam and C50), and a carboxy-terminal truncation
(FL50
STAD). Plasmids expressing these constructs were transfected
into CV-1 cells together with a luciferase reporter driven by a
promoter consisting of five Gal4 elements upstream of the herpes
simplex virus TK TATA box; 48 h later, cell extracts were assayed
for luciferase expression (Fig. 5B). Both full-length ORF50 and the two
amino-terminal truncations of ORF50 significantly activated
transcription, while a deletion of the C-terminal 161 aa of ORF50
resulted in a protein incapable of transcriptional activation. (As
shown in Fig. 5D, all constructs produced stable immunoreactive fusion
proteins.) These results suggest that the principal activation domain
of ORF50 lies at its extreme carboxy terminus between aa 531 and 691. This conclusion was confirmed by showing that the C50 construct,
containing only 205 carboxy-terminal aa of ORF50, retained the full
transactivation function of full-length ORF50 when targeted to DNA as a
Gal4 fusion. As expected from the broad host range of wild-type ORF50
activation (Fig. 4B), the Gal4-C50 fusion was fully active in both the
BJAB and the SLK cell lines (Fig. 5C).
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mutations in F442 create a
dominant-negative mutant of Gal4-VP16 (17).
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Deletion of the ORF50 protein activation domain creates a dominant-negative mutant. To activate the transcription of some EBV promoters, the EBV Rta protein must dimerize and bind DNA (21, 23, 35, 41); these functions of EBV Rta localize to its amino terminus (35). Since this region is detectably conserved in KSHV ORF50, we hypothesized that the N terminus of ORF50 would have a similar function. If so, this domain organization would suggest that removal of the carboxy-terminal activation domain from the KSHV ORF50 protein might generate a dominant-negative allele capable of inhibiting wild-type ORF50 function.
Using Gal4-FL50
STAD as a guide, we truncated wild-type ORF50 C
terminally at aa 530, and this coding region was fused to an epitope
tag from the c-myc gene and three repeats of the SV40 large
T antigen NLS (see Materials and Methods). This procedure generated the clone pCMV-myc-nuc-50
STAD. When this plasmid was transfected into Cos-7 cells, the fusion protein (ORF50
STAD) was
stably and detectably expressed (Fig.
7B). As expected (Fig. 7A), this mutant
was unable to transactivate a cotransfected reporter gene driven by the
ORF57 promoter, a promoter known to be strongly activated by wild-type
ORF50 (Fig. 4). We then examined whether this mutant could interfere
with the activity of wild-type ORF50 by cotransfecting increasing
amounts of the mutant together with a constant amount (1 µg) of
wild-type ORF50 and the aforementioned reporter. (All transfections
were brought to a fixed DNA concentration with vector DNA to control
for nonspecific effects of the input DNA.) Figure 7A shows that
increasing amounts of ORF50
STAD severely inhibited the ability of
wild-type ORF50 to transactivate the ORF57 promoter in a dose-dependent
fashion; maximal inhibition approached 95%. ORF50
STAD also
comparably inhibited wild-type ORF50 transactivation of the
nut-1 promoter (data not shown). As a specificity control,
ORF50
STAD had no significant effect on the expression of an
irrelevant reporter, pCMV-lacZ, in the presence (data not shown) or
absence (Fig. 7A) of wild-type ORF50; this result confirms the finding
that the suppression of luciferase observed in Fig. 7 is not the
trivial result of cellular toxicity or transcriptional squelching.
|
STAD (see Materials and Methods) alone or in combination, and total
DNA was normalized to 10 µg in all transfections by the addition of
the empty vector. Wild-type ORF50 was immunoprecipitated only when
cotransfected with pV5-
STAD (Fig. 7C, fourth lane); wild-type ORF50
was not immunoprecipitated when expressed in the presence of the filler
plasmid. Thus, wild-type ORF50 and ORF50
STAD form heterodimers in
Cos-7 cell extracts.
As further evidence for heterodimer formation between the wild-type and
dominant-negative proteins, we also generated a clone (pGem3-50
STAD;
see Materials and Methods) which expressed a C-terminally truncated
protein similar to ORF50
STAD in RRL. In vitro transcripts for the
wild-type and mutant chains were translated in RRL, either individually
or together, precipitated with an anti-ORF50 antibody, and examined by
SDS-PAGE. Figure 7D shows that while the antibody recognized only
wild-type ORF50, when the chains were cotranslated, the truncated
protein could be efficiently coprecipitated, indicating heterodimer
formation. Importantly, the truncated protein was not
immunoprecipitated when translated alone. If homodimerization is
required for the function of wild-type ORF50, heterodimer formation with the mutant protein could be the basis for the dominant-negative effect of the mutation. However, these results do not exclude other
models for the mechanism of this class of dominant-negative mutation
(see Discussion).
Transactivation by ORF50 is necessary for lytic reactivation.
Next, the requirement for transcriptional activation by ORF50 in
inducing lytic reactivation was tested by ectopically expressing ORF50
STAD in BCBL-1 cells. We have previously established that the
ectopic expression of wild-type ORF50 in these cells induces the lytic
reactivation of KSHV with an efficiency similar to that of TPA
(34). In these assays, we transfect the ORF50 expression vector into BCBL-1 cells together with an expression vector for hepatitis delta antigen, whose expression can be monitored by immunofluorescence to mark successfully transfected cells. At least
1,000 transfected cells are then scored by immunofluorescence for the
expression of two markers of KSHV lytic reactivation: (i) ORF59
protein, a DNA polymerase-associated processivity factor expressed in a
DE manner (13, 32), and (ii) K8.1 protein, a viral envelope
glycoprotein expressed with late kinetics (31, 42). Each of
these two proteins was detected with monoclonal antibodies specific for
the corresponding marker (34).
STAD were transfected into
BCBL-1 cells, as was the empty expression vector for each protein
(pcDNA3 and pCMV-myc-nuc). The cells were either left untreated or
stimulated with TPA at 15 to 18 h posttransfection. Lytic
reactivation was scored at 72 h posttransfection by the methods
described above. Figure 8A shows the
results of this analysis. In the absence of TPA, the characteristic 0.3 to 0.8% of BCBL-1 cells underwent spontaneous reactivation in both of
the empty vector-transfected populations. This value for the
pcDNA3-transfected cells was set as the background level of
reactivation against which the other transfections were compared. After
the addition of TPA to similarly transfected cultures, ORF59 protein
was induced 10- to 12-fold and K8.1 protein was induced about 7-fold,
consistent with our previous observations (34). These
results indicate that the expression of the short SV40 NLS-containing
peptide from pCMV-myc-nuc does not alter the reactivation
characteristics of pcDNA3-transfected cells.
|
ectopic expression of ORF50 induced ORF59 and K8.1 in a manner
indistinguishable from that of TPA. The addition of TPA to cells
expressing wild-type ORF50 resulted in an even greater enhancement of
reactivation
the percentage of transfected cells expressing both ORF59
and K8.1 was approximately doubled relative to the value obtained with
transfection of ORF50 alone or TPA treatment alone. However,
electroporation of the ORF50
STAD expression vector resulted in a
complete inhibition of detectable spontaneous reactivation in the
uninduced cultures. Moreover, ectopically expressed ORF50
STAD
potently suppressed the induction of lytic cycle markers by TPA (Fig.
8A) and sodium butyrate (Fig. 8B), inducers with different biochemical
mechanisms of action (ORF50
STAD also suppressed induction by
ionomycin [data not shown]). Taken together, these results indicate
that, under conditions in which ORF50 is produced at natural levels in
the context of the intact viral genome, its product is required for the
lytic induction of KSHV by all known inducing stimuli.
| |
DISCUSSION |
|---|
|
|
|---|
The data presented here support a central role for the ORF50
protein in the lytic reactivation of KSHV in BCBL-1 cells. We have
demonstrated that the 3.6-kb ORF50 transcript is one of the first to be
expressed after the induction of KSHV replication (Fig. 1B). Its onset
of expression precedes even that of the transcripts of other candidate
viral IE genes (e.g., ORF57, K3, and K5). This finding suggests that
the expression of the KSHV ORF50 protein might augment the expression
of these other potential regulatory proteins
an inference supported by
data (Fig. 4) showing that the promoters of both ORF57 and K-bZIP are
potently upregulated by ORF50 coexpression. However, we do not know if
these genes are strictly dependent upon ORF50 for their expression and
do not believe that they should be assigned to the DE class on this basis. We note that the availability of a dominant-negative version of
ORF50 may provide a useful reagent for investigation of this question,
since classically defined IE genes should be expressed in its presence.
This approach has the additional virtue of not requiring the use of
toxic inhibitors of protein synthesis which, in BCBL-1 cells at least,
produce unacceptable nonspecific cytotoxicity.
Our analysis of the physical properties of the ORF50 protein demonstrates that a substantial fraction of its abnormal electrophoretic mobility can be attributed to phosphorylation (Fig. 3). In fact, the sequence analysis of the ORF50 polypeptide reveals numerous consensus elements for two cellular serine/threonine kinases, casein kinase II and PKC. Interestingly, the EBV switch protein Zta has been shown to be regulated posttranslationally through serine/threonine phosphorylation by PKC, a potent stimulator of Zta transactivation (6). We note that lytic reactivation induced by the ORF50 protein is further enhanced by the addition of TPA (Fig. 8A). One potential explanation for this effect of TPA may be upregulation of the activity of ORF50 by modulation of its phosphorylation state. However, many other models could also explain this observation.
Our finding that ORF50 transactivates DE promoters in the human cell
lines BJAB and SLK (Fig. 4B) indicates that the protein is active in
the major cell types in which viral latency is known to be established
and from which reactivation must occur in vivo. Together with its
activity in the simian fibroblast cell line CV-1, the data suggest that
the transcriptional activity of the protein displays little cell type
specificity. This conclusion is consistent with the simplest model for
its action
namely, that it binds to DNA in a site-specific fashion and
recruits or activates ubiquitous components of the basal transcription
machinery. However, models in which the protein might be targeted to
DNA via interactions with ubiquitous DNA binding proteins are not
excluded; indeed, it is possible that the protein uses both modes of
action, for example, under different physiological circumstances or on
different target promoters. We are currently defining the target sites
for ORF50 action both genetically and biochemically.
The identification of an activation domain in the C terminus of the
protein allowed us to construct a potent and specific dominant-negative
allele. Several possible models can be proposed for the mechanism by
which the mutant blocks ORF50 transactivation. Since the mutant can
form heterodimers with wild-type ORF50, one model might be that such
mixed oligomers would be inactive for transactivation. Alternatively,
mutant homodimers might compete for promoter binding sites with the
wild-type protein. Regardless of the details of the mechanism, however,
the effects of ORF50
STAD expression on lytic reactivation
either
spontaneous or induced
demonstrate the necessity of ORF50 for all
known reactivation events and strongly implicate its transcriptional
activity as the basis for this role. While not in itself diagnostic of
a role for ORF50 as the molecular switch governing the latent-lytic
transformation, this finding, together with the extremely early
kinetics of ORF50 expression and the inductive effects of its forced
overexpression (34, 55), strongly supports such a role.
Given the importance of lytic reactivation in the natural history of
KSHV infection, the enumeration of the targets of ORF50 action and the
analysis of its biochemical mechanism of action are now critical
subjects for investigation.
| |
ACKNOWLEDGMENTS |
|---|
We thank the Ganem laboratory members for helpful advice and discussion.
We thank the Howard Hughes Medical Institute for generous support. D.M.L. is a postdoctoral fellow of the Irvington Institute for Immunological Research.
| |
FOOTNOTES |
|---|
* Corresponding author. Mailing address: Departments of Microbiology and Medicine and Howard Hughes Medical Institute, Box 0414, University of California, San Francisco, CA 94143. Phone: (415) 476-2826. Fax: (415) 476-0939. E-mail: Ganem{at}socrates.ucsf.edu.
| |
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