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Journal of Virology, September 1998, p. 7048-7056, Vol. 72, No. 9
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Pathogenicity Induced by Feline Leukemia Virus,
Rickard Strain, Subgroup A Plasmid DNA (pFRA)
Hang
Chen,1
Marta
K.
Bechtel,1
Yan
Shi,2
Andrew
Phipps,3
Lawrence E.
Mathes,3
Kathleen A.
Hayes,3 and
Pradip
Roy-Burman1,2,*
Department of Biochemistry and Molecular
Biology1 and
Department of
Pathology,2 University of Southern California
School of Medicine, Los Angeles, California 90033, and
Center
for Retrovirus Research and Department of Veterinary Biosciences,
Ohio State University, Columbus, Ohio 432103
Received 6 April 1998/Accepted 20 May 1998
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ABSTRACT |
A new provirus clone of feline leukemia virus (FeLV), which we
named FeLV-A (Rickard) or FRA, was characterized with respect to viral
interference group, host range, complete genome sequence, and in vivo
pathogenicity in specific-pathogen-free newborn cats. The in vitro
studies indicated the virus to be an ecotropic subgroup A FeLV with
98% nucleotide sequence homology to another FeLV-A clone (F6A/61E),
which had also been fully sequenced previously. Since subgroup B
polytropic FeLVs (FeLV-B) are known to arise via recombination between
ecotropic FeLV-A and endogenous FeLV (enFeLV) env elements,
the in vivo studies were conducted by direct intradermal inoculation of
the FRA plasmid DNA so as to eliminate the possibility of coinoculation
of any FeLV-B which may be present in the inoculum prepared by
propagating FeLV-A in feline cell cultures. The following observations
were made from the in vivo experiments: (i) subgroup conversion from
FeLV-A to FeLV-A and FeLV-B, as determined by the interference assay,
appeared to occur in plasma between 10 and 16 weeks postinoculation
(p.i.); (ii) FeLV-B-like recombinants (rFeLVs), however, could be
detected in DNA isolated from buffy coats and bone marrow by PCR as
early as 1 to 2 weeks p.i.; (iii) while a mixture of rFeLV species
containing various amounts of N-terminal substitution of the endogenous
FeLV-derived env sequences were detected at 8 weeks p.i.,
rFeLV species harboring relatively greater amounts of such substitution
appeared to predominate at later infection time points; (iv) the
deduced amino acid sequence of rFeLV clones manifested striking
similarity to natural FeLV-B isolates, within the mid-SU region of the
env sequenced in this work; and (v) four of the five cats,
which were kept for determination of tumor incidence, developed thymic
lymphosarcomas within 28 to 55 weeks p.i., with all tumor DNAs
harboring both FeLV-A and rFeLV proviruses. These results provide
direct evidence for how FeLV-B species evolve in vivo from FeLV-A and
present a new experimental approach for efficient induction of thymic
tumors in cats, which should be useful for the study of retroviral
lymphomagenesis in this outbred species.
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INTRODUCTION |
Feline leukemia virus (FeLV), a
member of the retrovirus family, is a naturally occurring virus found
in the domestic cat population (16, 35). Since its first
isolation in 1964 (20), various studies of FeLV have led to
a better understanding of contagiously transmitted retroviral diseases
in natural environments (2, 14, 28, 43). Three horizontally
transmitted FeLV subgroups, termed FeLV subgroup A (FeLV-A), FeLV-B,
and FeLV-C, have been defined by viral interference assays that detect
genetic sequence variation in the viral surface glycoprotein (SU)
moiety of the envelope (env) gene (45, 46).
FeLV-A is an ecotropic virus which is present in all natural isolates;
FeLV-B is a polytropic virus that is found with FeLV-A and is
overrepresented in cats with lymphosarcomas relative to infected but
otherwise healthy cats; and FeLV-C, which is also polytropic, is found
infrequently but in association with FeLV-A or FeLV-A plus FeLV-B and
is known to induce fatal aplastic anemia in cats (1, 8, 15, 19, 24, 39, 40). There is evidence to support an origin of FeLV-B viruses by recombination in SU between FeLV-A and endogenous FeLV (enFeLV) env elements (9, 21, 32, 33, 42, 47, 48, 52). It has been speculated that FeLV-C might also be a variant of FeLV-A due to mutational events (28). In this regard,
FeLV-A is consistently associated with all FeLV-related
proliferative and antiproliferative diseases in the domestic cat
population.
Although several biological isolates of FeLV-A are available, only a
few have been molecularly cloned. The list includes molecular clones
FeLV-A/Glasgow-1 (pFGA) (52), G1(L) (23), F6A and
F3A (7), and GMA-3-2 (54), of which only one
FeLV-A clone, F6A, has been completely sequenced. In this report, we
describe the molecular cloning and biological properties of another
clone of FeLV-A (FRA), for which we also present the complete genome
sequence. In an attempt to seek evidence for in vivo derivation of
other FeLV subgroups, as well as to determine the pathogenicity of this newly isolated FeLV-A molecular clone, we examined FRA-infected cats
over a prolonged period of observation. Although previous studies
addressed the issue of in vivo derivation of FeLV-B species from a
FeLV-A molecular clone (4, 42), administration of an
inoculum prepared by propagating the virus in feline cell cultures could not rule out the possibility of introducing rFeLVs along with the
parental virus. Noting the success of establishing a retroviral
infection in vivo by direct delivery of proviral DNA into animals by
either intramuscular or intradermal injection (22, 36, 55,
56), we studied the infection, virus evolution, and pathogenicity
of FRA by direct intradermal injection of the pFRA plasmid into
specific-pathogen-free (SPF) newborn kittens. In this report, we
present data demonstrating in vivo generation of FeLV-B species from
FeLV-A FRA molecular clone as well as the high efficiency of lymphoma
induction in cats by the approach of direct inoculation of the proviral
plasmid DNA.
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MATERIALS AND METHODS |
Subgenomic cloning.
Genomic DNA was prepared from the thymic
tumor tissue of cat 4746-1, which was cochallenged with an FeLV-A
Rickard plasma preparation and a mixture of in vitro-generated rFeLVs
(33, 48). A subgenomic library was constructed by using 8- to 20-kb EcoRI digestion fragments ligated into the
DASH
II phagemid (Stratagene, La Jolla, Calif.) vector. Proviral clones were
identified by screening with probe exU3 (27), which is
specific for the U3 region of all known exogenous FeLV long terminal
repeat (LTR) sequences, and then subcloned into the pBluescript
(Stratagene) vector. One of the clones with an insert of 11.4 kb was
determined to be similar to FeLV-A by PCR amplification of its
env gene with FeLV-A-specific primer sets (47,
48). After establishing its infection in the feline embryo
fibroblast cell line H927 (38) by plasmid DNA transfection,
we tentatively designated the clone FeLV-A (Rickard), or FRA.
Viral interference assay.
Viral interference assays to
identify FeLV-A, FeLV-B, and FeLV-C were performed as previously
described (45). FeLV pseudotypes of murine sarcoma virus
were generated with virus stocks derived from molecular clones
FeLV-A/Glasgow-1 (pFGA) (52), FeLV-B/GA (pBHM-1)
(9), and FeLV-C/Sarma (pFSC) (39).
Host range analyses.
The H927 cells were transfected with
pFRA by the calcium phosphate transfection method as described
previously (34). Viral stocks were prepared from cell
culture supernatant fluids and subsequently used to test their
infectivity in the following cell lines: feline T-lymphoid tumor 3201B
(49) and large granular lymphoma-derived MCC (6);
human fibrosarcoma HT1080 (ATCC CCL-121), T-lymphoblastic leukemia CEM
(ATCC CCL-119), and B-lymphoid tumor Raji (ATCC CCL-86); canine
osteogenic sarcoma D-17 (ATCC CCL-183); mouse fibroblast NIH 3T3; and
mink lung cell line (ATCC CCL-64). The cell lines were maintained under
culture conditions as described previously (6, 34) or as
recommended by the American Type Culture Collection. After initial
virus infection in the presence of DEAE-dextran, the cells were
maintained for 2 weeks during which period culture supernatants were
monitored by the enzyme-linked immunosorbent assay (ELISA) for FeLV
capsid antigen detection (Virachek FeLV ELISA; Synbiotics, San Diego,
Calif.).
Nucleotide sequencing and primers.
Primers in the
env gene region used for pFRA sequencing were as follows.
Primers oriented in the sense direction included RB59 (47);
RB38 (24); RB27, F6A sequence 7069 to 7088 (GACTGTTCCTAAGACCCACC); RB60, F6A sequence 7473 to 7488 (CAATTAGTGCCTTAGA); and RB43, F6A sequence 7647 to 7665 (GAGAAAGACTAAAACAGCG). Antisense primers were RB52
(47); RB16 (24); RB17 and RB39 (5);
RB62, complementary to the published F6A sequence 8028 to 8009 (GTAATTTTCCATGCCTTGTG); and H17, complementary to F6A 7704 to 7685 (CCTTCAAACCATCCCTGTTG). Multiple primers
encompassing the gag and pol genes and based on
the published sequence of the F6A clone (7) were synthesized to completely sequence the FRA plasmid. In addition, RB400,
complementary to F6A 488 to 474 (CCCAAATGAAAGACC), and RB46,
corresponding to F6A sequence 7922 to 7938 (TGTATGATTCCATTTAG),
were used to sequence the 5' and 3' LTRs, respectively. Both the
manual dideoxynucleotide termination method (44) and
automated cycle sequencing were performed with the above primers.
Automated fluorescence-based cycle sequencing was conducted with the
ABI Prism 377 DNA sequencer (Perkin-Elmer, Foster City, Calif.) and the
ABI Prism Dye Terminator cycle-sequencing kit (P/N 402080) as specified
by the manufacturer. Nucleotide sequences from automated sequencing
were initially read and analyzed with the ABI Prism DNA sequencer
analysis software, version 3.0. Subsequent analyses and comparisons of
all sequence data were performed with GeneJockey software. The complete
env gene and a portion of the pol gene in which a
notable sequence variation with F6A occurred were sequenced in both
directions. The remainder of the provirus sequence, although sequenced
in a single direction, was confirmed by at least two independent sequencing reactions.
pFRA plasmid challenge.
Thirteen SPF kittens were inoculated
intradermally with 50 µg of pFRA plasmid DNA combined with a cationic
lipid compound (DOTAP; Boehringer Mannheim) at 24 h postpartum
(56). The kittens remained with their own dams until weaning
at 10 weeks of age and then were separated by sex into one or two
animals per cage. Once paired, cage mates were not changed throughout
the remainder of the study. All inoculations and subsequent blood
specimen collections were performed under ketamine anesthesia (25 mg/kg).
Antigen and antibody detection.
FeLV antigenemia was
measured by antigen capture enzyme-linked immunosorbent assay (Petchek
FeLV ELISA; Synbiotics, San Diego, Calif.) for the detection of p27
capsid protein in plasma and tissues. Anti-FeLV antibody responses were
detected by indirect immunofluorescence on the FL-74 cat T-lymphoma
cell line chronically infected with FeLVs representing each of the A,
B, and C subgroups (11). At necropsy, hematopoietic and
various other tissues were collected for histopathologic examination as
well as for the detection of FeLV antigen in tissue sections by
immunofluorescence assay.
PCR analysis.
Genomic DNA was isolated from bone marrow and
buffy coat samples at various postinfection (p.i.) time points with a
tissue genomic DNA isolation kit (Qiagen, Santa Clarita, Calif.).
Nested PCR was performed with 250 ng of genomic DNA in the first round of amplification (35 cycles), using the following primer set: H18, the
5' sense primer, corresponding to F6A sequence 5840 to 5860 (ACATATCGTCCTCCTGACCAC) at the pol/env junction
which is conserved among all exogenous FeLVs; and H20, the 3' antisense primer, complementary to the exogenous U3 sequence in the LTR (F6A 8210 to 8189, GAAGGTCGAACTCTGGTCAACT). A 1-µl volume of PCR product from the first round of amplification was used in second-round amplification with another 35 cycles and with primers RB53 and RB17 as
reported previously (33). Genomic DNA was also isolated from
the terminal thymic tumors from four cats (cats 5022 to 5025) as well
as from a lymph node metastasis of cat 5023 as described above. Direct
PCR was carried out with 250 ng of DNA, using primer sets RB59 and RB17
for FeLV-A-specific amplification and RB53 and RB17 for FeLV-B-specific
amplification. PCR was also performed to amplify a region of LTR by
using primers RB84, F6A sequence 8025 to 8045 (TTACTCAAGTATGTTCCCATG), and RB42, complementary to F6A
sequence 8324 to 8306 (GGTCAAGTCTCAGCAAAGA). Total RNA was
prepared with an RNA isolation kit (Clontech, Palo Alto, Calif.) from
plasma samples at various time points. Nested reverse transcriptase PCR
(RT-PCR) was performed as previously described (33) with the
same sets of primers as listed above. pFRA and FeLV-B/GA (pBHM-1) served as controls in these PCRs.
TA cloning and characterization of clones.
By using the
entire 50-µl PCR volume, the desired PCR product bands were purified
from 1% (or 2% for LTR amplification) agarose gels and cloned into
the TA cloning vector (pCR2.1) (Invitrogen, Carlsbad, Calif.). For each
tissue sample analyzed for the 3' crossover site, 6 to 12 clones were
selected and nucleotide sequencing was performed as described above.
The 3' recombination crossover junctions were determined by sequence
alignment to both enFeLV CFE-6 (21) and FRA. A total of 41 clones isolated from various tissues of four different cats at
different time points were further sequenced and analyzed for
nucleotide sequence similarity to reported sequences of natural FeLV-B
isolates in a ca. 600-bp region of the SU portion of the rFeLV
env gene. Three clones derived from a PCR product of the LTR
U3 region of a tumor DNA, which was larger than the expected FRA
product, were also sequenced in both directions to define the changes.
Nucleotide sequence accession number.
The complete FRA
provirus sequence reported here was deposited in GenBank under
accession no. AF052723.
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RESULTS |
Biological and biochemical characterization of the FRA molecular
clone.
To determine the interference pattern of FRA, feline
embryonic fibroblast (FEA) cells were transfected by pFRA and used as initiators. FeLV pseudotypes of murine sarcoma virus representing subgroups A, B, or C were used for superinfection. The results (not
shown) indicated that FRA infection of FEA cells could block subgroup A
virus-mediated but not subgroup B or C virus-mediated morphologic
transformation. This subgroup A phenotype was consistent with the
ecotropic host range of FRA. While FRA failed to infect cells of
heterologous species such as human fibrosarcoma, B-lymphoid, and
T-lymphoid cells, mouse fibroblasts, or mink lung cells, it could
readily infect the feline cell lines tested, namely, FEA and H927
fibroblasts, and 3201B and MCC lymphoid cells (data not shown).
However, like the F6A virus, FRA could cause a slight infection in the
D-17 canine cells, which did not increase over the period of
observation.
The entire FRA proviral genome (8,448 bp) encompassing
5'-LTR-gag-pol-env-LTR-3' was sequenced. The comparison of
the nucleotide sequence with that of another FeLV-A provirus clone, F6A
(8,440 bp), revealed an overall 98% homology. The eight additional
nucleotides in FRA relative to F6A were found as one extra nucleotide
in each of the two LTRs and six extra nucleotides over a 55-bp region in the middle of the pol gene. It was noteworthy that all of
these extra nucleotides were present in the corresponding sequence of the enFeLV CFE-6 clone (21).
Attempts were made to compare the deduced amino acid sequence of the
env gene of FRA with the reported sequences of other FeLV-A
isolates, F6A, F3A, and FGA. While there was extensive homology among
the env gene of all these isolates, FRA exhibited the
highest homology to F3A, with a difference of only nine amino acids
over the entire 643-amino-acid region of the env gene (Fig. 1). The sequence divergence appeared to
be the highest between FRA and F6A representing 14 amino acids
alterations scattered in the SU domain and one occurring in TM region.

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FIG. 1.
Comparison of the deduced amino acid sequence of the
env gene of FRA with other FeLV-A isolates. (A) The top line
indicates the relative positions of signal peptide (SP), surface
glycoprotein (SU), and transmembrane protein (TM) regions within the
env gene. Numbers on the diagram indicate amino acid
numbering starting from SP (34). Sequences are depicted as
horizontal lines, and all sequences are compared with that of F3A.
Vertical lines indicate sites of amino acid substitutions compared to
F3A. The dashed vertical line in the FGA sequence indicates an amino
acid change that was unique to the FGA isolate. (B) Locations of the
previously characterized FeLV variable regions (VR) within the
env gene (21).
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As stated above, a higher level of homology was detected between the
FRA sequence and the enFeLV CFE-6, compared to the homology to F6A, in
the pol gene, specifically in the portion encoding the
middle region of the RT gene product. This is illustrated in Fig.
2. It appeared that in this region, FRA
and enFeLV CFE-6 nucleotide sequences had more similarity to the
reported sequence of the murine leukemia virus (AKV MuLV)
(17) than did the F6A sequence. A total of six nucleotide
deletions scattered over the 55-bp region of the F6A sequence resulted
in a reading frameshift to produce 12 amino acid substitutions and 2 amino acid deletions which were apparently unique to F6A. The last of
the six nucleotide deletions at position 4299 of F6A seemed to return
the F6A sequence back in frame with those of AKV MuLV, enFeLV CFE-6,
and FRA sequences.

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FIG. 2.
Nucleotide and deduced amino acid sequence variations in
the mid-pol region of FeLV clones. The indicated sequences,
residing within the RT gene, are presented in reference to AKV MuLV
sequence (17). The single-letter designation for the amino
acid sequence is shown above the nucleotide sequence. Identity to the
MuLV sequence is indicated by dots, and amino acid changes are shown in
boldface type. To maintain sequence alignment, gaps were introduced
into the F6A sequence (indicated by dashes). The number at the top left
corner of each sequence indicates the position of the starting
nucleotide corresponding to GenBank accession no. J01998 (for AKV
MuLV), L06140 (for enFeLV, CFE-6), AF052723 (for FRA), and M18247 (for
F6A).
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A comparison of the LTR sequence of FRA with other FeLV isolates did
not reveal any significant differences. Like all mammalian simple-genome oncoviruses (13), the U3 region of FRA LTR
contained a binding site for leukemia virus factor b, a viral core-like element, the motif for nuclear factor-1 (NF-1), and the glucocorticoid response element. In addition, a novel protein binding site termed FLV-1, which is found in the FeLV LTR downstream of the enhancer domain
(2), was present in the FRA U3. All of these binding sites
were present as one copy in the FRA LTR.
In vivo infectivity and pathogenicity of FRA.
The FRA plasmid
DNA was inoculated intradermally into 13 1-day-old cats. While all the
cats which were kept beyond 4 weeks of observation developed chronic
FeLV antigenemia, the antigenemia was detected at only 34 weeks p.i. in
one cat (cat 5026) (Table 1). Detection
of antigenemia beginning between 3 and 5 weeks p.i. in most of the cats
was, however, comparable to that in studies involving an uncloned
Rickard FeLV-A challenge (33).
The pattern of seroconversion in these newborn cats was determined by
fluorescent antibody titers reacting to FL-74 cell membrane antigens
(the feline lymphoid tumor cell line FL-74 chronically produces all
three A, B and C subgroups of FeLV). First assayed at 8 weeks p.i.,
most cats, in general, showed an antibody response (data not shown).
The antibody titers, expressed as the highest serum dilution with
50% positive cells (11), varied from 10 to 160. For two
cats (cats 5020 and 5023), the titers decreased to <10 at 20 and 24 weeks p.i., respectively, while in one cat (cat 5026), the titer
increased to 320 by 22 weeks p.i. This last cat, which rapidly
developed a strong antibody response, escaped viremia until the last
time point of 34 weeks p.i. (Table 1).
Four of the five pFRA-challenged cats kept for monitoring tumor
development exhibited thymic lymphosarcoma between 28 and 55 weeks p.i.
The fifth cat developed nonregenerative anemia and was euthanized at 65 weeks p.i.
Selected plasma samples collected from individual animals were tested
for the FeLV subgroup by the interference assay. At 10 weeks p.i., all
plasma samples were positive for subgroup A and negative for subgroups
B and C (Table 1). By 20 weeks p.i., four of the five cats had
converted to an AB subgroup phenotype. In cat 5020, one of those four,
no subgroup B virus was recovered for weeks 28 and 34 although by week
50 subgroup B was once again detected (Table 1). This cat eventually
converted to subgroup ABC and died of severe nonregenerative anemia.
Except for one sample at week 43, which was positive for both subgroups
A and B, plasma samples from cat 5025 were of subgroup A throughout the
observation period.
To determine the generation of recombinant FeLVs in vivo in various
tissues early in infection, one group of cats was euthanized at 2, 4, 14, and 34 weeks after pFRA injection. For this study, bone marrow,
buffy coat, and plasma samples from some of these cats as well as such
samples from some of the cats kept for tumor induction were further
analyzed for the presence of the recombinant env gene.
PCR detection of recombinant viral products in tissues of the
FRA-infected cats.
The DNA extracted from bone marrow and buffy
coat specimens collected from different infected cats at different time
points was examined for the presence of recombinant env
proviruses by nested PCR. Serial plasma samples collected at 2, 4, 6, 8, 14, and 32 weeks p.i. from a single cat (cat 5023) were also
examined for the presence of recombinant viral RNA species by RT-PCR. A representative analysis is depicted in Fig.
3, and the data obtained from the tests
of bone marrow and buffy coat samples are summarized in Table
2. It was interesting that the
recombinants evolved rapidly in the inoculated cats, since bone marrow
specimen collected as early as 2 weeks p.i. were positive for
env recombinant provirus. Most of the buffy coat samples
tested were also positive, and one of the two such samples collected at
1 week p.i. was determined to contain recombinant proviruses. There
was, however, a delay in the appearance of detectable rFeLVs in the
plasma. In the plasma of cat 5023, rFeLV RNA was detected at 14 weeks
p.i. by RT-PCR but not at 8 weeks p.i. or earlier time points (Fig. 3).
This plasma analysis of a single cat was consistent with the results of
an interference assay of the plasma of this and other cats (Table 1),
in which most of the cats exhibited subgroup conversion at about 16 weeks p.i.

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FIG. 3.
Detection of rFeLVs in buffy coat, bone marrow, and
plasma samples from cat 5023 by nested PCR. Analyses of samples at 8, 14, and 32 weeks p.i. are displayed. While cell DNA was amplified for
buffy coat and bone marrow specimens, plasma RNA was analyzed following
the reverse transcription reaction. Plasma samples at earlier time
points (2, 4, and 6 weeks p.i.) were determined to be negative and are
not shown. The arrows mark the correct PCR product of ~0.9 kb. Water
and pFRA were used as negative controls in all experiments, while the
FeLV-B/GA clone (pBHM-1) was used as positive control as indicated. The
reverse transcription negative control with water at the reverse
transcription step followed by nested PCR was also negative and is not
shown.
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Because of tumor cell clonal proliferation, it was not necessary to use
nested PCR to detect rFeLV proviruses in the tumor tissues. Direct PCR
with the tumor DNAs revealed the expected size of PCR products for the
recombinant env gene fragment (Fig. 4). All four primary thymic tumors, as
well as a metastatic lymph node deposit of one tumor (in cat 5023),
were uniformly positive for the existence of the recombinant proviruses
in addition to the parental FRA-like proviruses.

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FIG. 4.
Detection of both FeLV-A and rFeLV proviruses in primary
tumor samples of four cats by direct PCR. (A) FeLV-A-specific primers
produced a PCR product of the expected size (1.07 kb). Water and pBHM-1
were used as negative controls, while pFRA served as a positive
control. (B) FeLV-B-specific primers amplified a product of the
expected size (~0.9 kb). Water and pFRA were negative controls, and
pBHM-1 was the positive control. 5023m denotes a lymph node metastasis
in cat 5023.
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Since FeLV-related naturally occurring T-cell tumors were reported to
harbor proviruses with enhancer duplication in the LTR (12,
25), we wished to examine the four FRA-induced experimental thymic tumors as well as the metastatic specimen described above for
potential changes in the LTR enhancer region. Unlike the natural tumors, only one of the four experimental tumors exhibited a PCR product in the U3 region that was larger than the expected product from
FRA LTR. This is illustrated in Fig. 5.
The most prominent larger product of the tumor DNA of cat 5025 was
molecularly cloned, and three individual clones were sequenced. While
there were one to four nucleotide differences between the clones in the
entire 375-bp region we cloned, these clones were identical in the
38-bp perfect triplication from the LVb-binding site (51) to
the middle of the NF-1 site (12) in the U3 region. The
scattered nucleotide differences were located downstream of the NF-1
site.

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FIG. 5.
Analysis of the exogenous LTR U3 region in tumor
specimens from FRA-infected cats. (A) PCR amplifying a 300-bp region
from the DNA of two thymic tumors. Lanes: 1, pFRA as control; 2, tumor
from cat 5024; 3, tumor from cat 5025. The upper arrow indicates the
larger product, whereas the lower arrow indicates the normal-sized
product. (B) Sequences encompassing the region of triplication are
compared between FRA (lane 1) and tumor DNA from cat 5025 (lane 2). The
triplicate sequence is shown within the brackets. Structural motifs are
underlined and identified above the FRA sequence. Numbers at the ends
of the sequences mark the relative distance from the CAP site.
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Structural features of env gene recombinants.
Our
previous studies with the in vitro-derived rFeLV pool showed that they
contained multiple recombination structural motifs with various 3'
crossover sites in the env gene which were designated recombination junction sites A through G (33, 47, 48). These junction sites represented various amounts of enFeLV substitution starting near the 5' end of the rFeLV env such that
recombination junction site A had the smallest amount of enFeLV-derived
sequence (CFE-6 nucleotide env 746) and junction site G had
the greatest enFeLV substitution (CFE-6 nucleotide env 1016)
(48). In the present study, we cloned the approximately
0.9-kb PCR product encompassing the recombination sites from bone
marrow and buffy coat specimens of one pFRA-inoculated cat (cat 5022).
These samples were collected at various time points during the
infection period, ranging from 8 to 28 weeks p.i. We also cloned the
PCR products from the terminal thymic tumor samples from all four cats
(cats 5022, 5023, 5024, and 5025). The results of the analysis of
recombination sites are summarized in Table
3, the top portion of which provides a
map of the recombination sites relative to SU and TM start positions. In bone marrow and buffy coat samples from cat 5022, recombinant species with 3' crossover sites E, F, and G or >G were relatively more
abundant at later time points than at earlier time points. In tumor
samples from all four cats, the recombinants with greater amounts of
endogenously derived sequences were also the predominant species.
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TABLE 3.
Summary of 3' recombination junction sites observed in
env gene of in vivo-derived rFeLV clones from
four cats
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In similar experiments, when we aligned the deduced amino acid
sequences of the same amplified region encompassing the recombination sites with sequences of the natural FeLV-B isolates, namely, FeLV-B/GA (29), FeLV-B/ST (29), and FeLV-B/Rickard
(10), as well as those for enFeLV CFE-6 and CFE-16
(21) and the parental FRA, four amino acid differences
relative to the CFE-6 sequence were invariably noted in all the rFeLV
clones examined which had 3' recombination sites downstream of site D. These included 2 clones from the 8-week-p.i. bone marrow sample from
cat 5022, 3 clones from the 8-week-p.i. bone marrow sample from cat
5023, and a total of 24 clones from four terminal thymic tumor samples
from cats 5022, 5023, 5024, and 5025. In addition, the five clones we
analyzed of the 1-week-p.i. buffy coat sample from cat 5033 harbored
all four amino acid changes. The sequences of these clones
representative of different recombination sites (E, F, G, and >G) are
presented in Fig. 6. The first amino acid
change relative to the enFeLV background was the conversion of MGPNP or
MGPDP to MGPNL epitope that is conserved in all exogenous FeLV
irrespective of subgroups (33). The next two consistent
amino acid changes downstream of this epitope appeared to resemble the
amino acid sequences of all previously characterized FeLV-B isolates
but different from either the parental FeLV-A or the putative enFeLV
partners. The last consistent amino acid difference was present in FRA
and all FeLV-B isolates. The noted amino acid differences were the result of single-nucleotide variations from the corresponding background sequence of the CFE-6 clone (21). All were
transition mutations: two C to T, one T to C, and one A to G.

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|
FIG. 6.
Deduced amino acid sequence comparison of the mid-region
of the SU gene of the in vivo-derived rFeLV clones with those of
parental enFeLVs, various FeLV-B isolates, and FRA. Clones
representative of recombination sites E, F/G, and >G (sites marked
above the CFE-6 sequence) are shown. Numbers in parentheses indicate
the total number of such clones examined. Amino acid sequences are
presented relative to CFE-6, with dots indicating identity. Four
consistent amino acid sequence differences, observed in all in
vivo-derived rFeLV clones as well as three isolates of FeLV-B, GA, ST,
and Rickard (R), are highlighted by boldface type (with the exception
of the last position, for which only clones of recombinant site >G are
highlighted) under the corresponding amino acid in CFE-6 (highlighted
in gray). Other scattered amino acid changes that were detected in a
few clones are also listed underneath the corresponding consensus
sequence. Those positions are underlined. Numbers at both ends of the
CFE-6 sequence depict the relative positions of these amino acids from
the start point of the mature SU peptide. CFE-16 has a truncated SU
peptide sequence because of a natural deletion (21). The
reference FRA sequence is shown at the bottom, with gaps (dashes)
introduced to maintain the sequence alignment.
|
|
 |
DISCUSSION |
The interest of this work is twofold. First, direct evidence has
been obtained to indicate that polytropic FeLV-B species can arise
rapidly in vivo in cats infected with a single molecular species of
ecotropic FeLV-A. The structural analyses of the env gene of
recombinant viruses evolved in vivo provide a scenario of selection of
recombinant species over the time course of infection to represent
viral species which closely mimic the previously characterized natural
isolates of the FeLV-B subgroup. Second, evidence is presented to
demonstrate that thymic lymphosarcomas can be induced with high
frequency over a latency period of 28 to 55 weeks in SPF newborn cats
by intradermal administration of proviral DNA of an FeLV subgroup A
virus. These issues are discussed below.
It has been documented that introduction and expression of FeLV-A
genetic material into feline cells in culture could give rise to FeLV-B
species from recombinational events between ecotropic FeLV-A and
enFeLV-derived env sequences (21, 32, 47, 48). However, it is the same fact that FeLV-B could emerge in
FeLV-A-infected feline cell cultures that complicates the analysis of
in vivo genesis of FeLV-B species when FeLV-A species propagated in
feline cells are used as the inoculum to infect cats (33,
42). To avoid such a problem, we carried out the present study by
intradermal administration of an FeLV-A provirus, namely, FRA, which we
have molecularly cloned in the laboratory. By using cloned plasmid DNA
as the inoculum, we eliminated the step of propagating the ecotropic
FeLV-A in feline cell cultures, which is known to facilitate recombinational events. The outcome of this study conclusively demonstrates that FeLV-B-like rFeLVs can be generated rapidly and
easily from FeLV-A and enFeLV in tissues of the experimental cats. The
recombinant species could be detected in buffy coat and bone marrow
cells of the animals as early as 1 to 2 weeks p.i. The systemic
distribution of the recombinant species is, however, relatively slow,
since the rFeLVs could not be detected in the plasma samples until
about 14 weeks p.i., as assayed by RT-PCR.
While examining the sites of recombination within the SU region of the
env gene of the in vivo-formed rFeLVs, we found that recombinants with relatively greater amounts of enFeLV-derived N-terminal SU substitutions (those with 3' crossover sites of E, F, G,
and >G) were generally the predominant species observed at later time
points during the course of infection. As we mentioned previously
(33), it reinforces the idea that recombinants with more
endogenously derived SU sequence may have an in vivo selective advantage. In this regard, it is noteworthy that a recent report described that a chimeric FeLV construct containing the FeLV-B sequence
at approximately 50% of the N-terminal SU (resembling a recombination
structural motif similar to the natural FeLV-B/GA isolate) was able to
recognize human Pit1 (HuPit1), HuPit2, and hamster Pit2 (HaPit2)
receptors while another chimeric construct, which contained only
one-third of the N-terminal FeLV-B SU sequence, was able to recognize
HuPit1 better than HuPit2 (3). The authors of that report
suggested that Pit2 recognition might be an important in vivo selection
factor. Another potential contributing factor could be that the
presence of a larger endogenously derived moiety of the SU protein
confers some resistance to host immune surveillance. While the extent
of contributions by these or other factors remains to be determined, it
is clear that rFeLVs emerging as the majority species in the infected
cats in this study do harbor relatively greater amounts of
enFeLV-derived SU sequence exhibiting structural motifs which resemble
those present in natural FeLV-B isolates.
Another point of interest is that all rFeLV clones examined with
recombination sites downstream of site D reveal certain consistent amino acid differences in the mid-SU region compared to the known sequence of enFeLV elements which are present as proviral DNA (21) or expressed as mRNAs in feline thymic cells
(26). If this known type of enFeLV transcripts participated
in the de novo recombination events with FRA mRNA during reverse
transcription (18, 53), one has to propose that single
nucleotide mutations in the background of the enFeLV frame will be
required to result in sequence similarity to natural FeLV-B isolates.
Alternatively, the possibility exists that there is an unidentified
enFeLV proviral element whose sequence is more similar to FeLV-B mRNA
than to CFE-6. Irrespective of the models, i.e., recombination of FRA with a hitherto unknown enFeLV or recombination with prototype CFE-6
enFeLV followed by evolution through mutation, the amino acid
differences observed here, which were present at the earliest time
point of analysis, may represent functional and structural constraints
required for the efficient propagation of rFeLVs in vivo.
The observation that in addition to the newly generated FeLV-B species,
one of the cats (cat 5025) contained FeLV-C species at a late stage (65 weeks p.i.) is quite intriguing. Repeated analysis of this plasma
sample confirmed the presence of FeLV-C-like viruses, and the cat, in
fact, succumbed to severe anemia known to be induced by FeLV-C species
(24, 39). It will now be important to isolate this
FeLV-C-like virus to examine the mechanism by which it might have
originated.
In vivo studies with FeLV-A preparations by the conventional route of
intravenous or intraperitoneal inoculation have shown a low frequency
of thymic tumor induction; only 4 of 28 cats developed tumors (30,
31, 37, 42). In contrast to the past experiments, we found a much
higher incidence of tumor induction when we introduced FRA
intradermally in DNA form, since four of the five cats developed thymic
lymphosarcoma and the fifth died of anemia. A logical question is thus
raised, i.e., whether the determinants of pathogenicity are specific
for the FRA clone or whether they are related to the approach by which
the viral material was delivered to the animals. Since FRA has as high
as 98% nucleotide sequence homology to F6A, which was previously used
to study tumor induction in vivo (31, 42), it is unlikely
that minor sequence divergences detected in either the pol
or env gene could be the discriminating factors. However, it
cannot be ruled out at this time whether even such minimal changes may
be responsible for increased recombinogenicity or any other functional
attributes of the FRA virus. Parallel studies with pFRA and pF6A are
necessary to evaluate the role of minor nucleotide variations in FeLV-A
pathogenesis. The promoter-enhancer region of FRA does not appear to
harbor any unique alterations that may distinguish it from other FeLVs,
and this region is not naturally duplicated in the FRA virus genome,
although enhancer duplication has been implicated with increased
leukemogenicity (2). While naturally occurring FeLV-related
T-lymphoid tumors have been associated with enhancer duplication or
triplication in proviral sequences present in tumors (12,
25), we found that only one of the four experimental tumors
contained enhancer triplication in these integrants.
Considering the above, it seems likely that the route of administration
of the proviral DNA may be important in tumorigenesis. Parental and
recombinant viruses may be more readily accessible to the putative
target cells when intradermally induced. These issues, however, remain
to be addressed in future experiments. Although ours is the first
report of FeLV infection of cats by direct inoculation of the viral
genetic material, we note that after the completion of this work,
intramuscular or intradermal inoculation of feline immunodeficiency
virus DNA was successfully used to establish feline immunodeficiency
virus infection in cats (41, 50). Thus, it appears that
cloned feline retrovirus DNA inoculation rather than inoculation by
virion preparations will be increasingly useful for the study of
retrovirus-mediated pathogenesis in domestic cats.
In conclusion, our results have confirmed that rFeLV could be generated
rapidly in vivo from parental FeLV-A infection and that the rFeLVs thus
formed undergo a selection process during the course of infection to
yield populations enriched in species with larger N-terminal SU
substitution from the endogenous elements. We also demonstrate the
efficiency of FeLV-A infection by DNA inoculation and suggest that such
an approach may be valuable in obtaining additional clues to the
mechanisms of retrovirus-induced hematopoietic malignancies in this
outbred species.
 |
ACKNOWLEDGMENTS |
We thank Lily Li for technical assistance with automated
sequencing.
This work was supported by Public Health Service grant CA51485 from the
National Cancer Institute.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Pathology, University of Southern California School of Medicine, 2011 Zonal Ave., Los Angeles, CA 90033. Phone: (323) 442-1184. Fax: (323)
442-3049. E-mail: royburma{at}hsc.usc.edu.
 |
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