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J Virol, July 1998, p. 5781-5788, Vol. 72, No. 7
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Human Immunodeficiency Virus Type 1 Vectors
Efficiently Transduce Human Hematopoietic Stem Cells
Richard E.
Sutton,1,*
Henry T. M.
Wu,1
Richard
Rigg,2
Ernst
Böhnlein,2 and
Patrick O.
Brown1
Department of Biochemistry and Howard Hughes
Medical Institute, Stanford University Medical Center, Stanford,
California 94305,1 and
SyStemix
Incorporated, Palo Alto, California 943042
Received 7 October 1997/Accepted 30 March 1998
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ABSTRACT |
Lentiviruses are potentially advantageous compared to
oncoretroviruses as gene transfer agents because they can infect
nondividing cells. We demonstrate here that human immunodeficiency
virus type 1 (HIV-1)-based vectors were highly efficient in transducing
purified human hematopoietic stem cells. Transduction rates, measured
by marker gene expression or by PCR of the integrated provirus,
exceeded 50%, and transduction appeared to be independent of mitosis.
Derivatives of HIV-1 were constructed to optimize the vector, and a
deletion of most of Vif and Vpr was required to ensure the long-term
persistence of transduced cells with relatively stable expression of
the marker gene product. These results extend the utility of this
lentivirus vector system.
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INTRODUCTION |
Gene therapy of many of the most
important therapeutic targets will require transduction of nondividing
cell types, including hematopoietic progenitors. Most retroviruses,
including murine leukemia virus (MuLV), cannot complete a replicative
cycle in nondividing cells because the preintegration complex is unable to traverse the intact nuclear membrane (23, 35). However, human immunodeficiency virus type 1 (HIV-1) has at least two gene products which allow nuclear entry in resting cells. The first is
matrix (MA), which is located at the N terminus of Gag and has a
canonical nuclear localization signal; in the absence of Vpr, it is
required for efficient replication of HIV in primary human macrophages
(2, 10, 11, 43). MA has been shown to interact biochemically
with alpha-importin (karyopherin-
1), which may be partly responsible
for docking the preintegration complex at the nuclear pore
(9). The second gene product is Vpr, which has alpha-helices
which are required for nuclear localization, and in the absence of MA
it is sufficient for HIV replication in primary cells (16).
Because of this property of HIV-1 (and presumably of the related
lentiviruses such as simian immunodeficiency virus [SIV] and HIV-2),
HIV-1 vectors have been used to transduce human cells. Akkina et al.
used a replication-defective HIV pseudotyped with vesicular stomatitis
virus G (VSV G) protein to transduce CD34+ cells
(1). However, they did not determine the precise
transduction rate or examine the expression of the marker on a per-cell
basis. Reiser et al. used a similar vector to transduce
CD34+ cells but did not investigate the stability of
expression (34). Neither group attempted to optimize the HIV
vector. Naldini et al. demonstrated that an HIV vector containing long
terminal repeats (LTRs), packaging signal, marker gene, and Rev
response-element could transduce resting cells (29). The
HIV(VSV G) pseudotyped viral supernatant had no detectable
replication-competent virus. HIV-packaging cell lines have been derived
by using HIV envelope glycoprotein such that the resulting
replication-defective virus had limited tropism and relatively low
titer (5).
We show here that HIV(VSV G) pseudotyped viral preparations are highly
efficient in transducing human CD34+ Thy1+
cells. When concentrated virus was used, the transduction rates were
greater than 50% as measured by the expression of the alkaline phosphatase (AP) marker gene and close to 100% as measured by PCR of
hematopoietic colonies. Transduction was dependent upon both reverse
transcriptase and integrase. Transduction was optimal if the cells were
exposed to cytokines for at least 48 h, but by several different
criteria transduction appeared to be independent of mitosis. A series
of HIV vectors were constructed, and long-term expression was greatest
when there was a deletion in both Vif and Vpr in addition to Nef, Env,
and Vpu. No replication-competent virus was detected in 108
infectious units. These results thus extend the utility of this lentivirus gene transfer system.
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MATERIALS AND METHODS |
Hematopoietic stem cells (HSC).
Healthy human donors were
primed with granulocyte colony-stimulating factor (G-CSF) for 5 days
and subsequently underwent leukophoresis. Peripheral blood
CD34+ cells were positively selected with a cell separation
device (Baxter HealthCare). CD34+ Thy1+ cells
were prepared by high-speed flow cytometry as described previously
(37). Purified cells were frozen in 90% fetal calf serum-10% dimethyl sulfoxide or used within 24 h of isolation. The cells were typically maintained in Iscove's modified Dulbecco's medium (IMDM) supplemented with 10% fetal calf serum, 50 U of penicillin G per ml, and 50 µg of streptomycin sulfate per ml and
containing 20 ng of interleukin-6 (IL-6) per ml, 20 ng of IL-3 per ml,
and 100 ng of stem cell factor per ml. For clonogenic assays, the cells
were placed into methylcellulose (Stem Cell Technologies) in the
complete medium described above along with 2 U of erythropoietin per ml
and 1 ng of granulocyte-macrophage (GM)-CSF per ml.
Plasmid vector construction.
pHIV-AP was obtained from N. Landau (15). It is derived from the HIV-1 NL4-3 isolate and
has a frameshift in gp160, and human placental alkaline phosphatase
replaces Nef. pHIV-AP
env was derived from pHIV-AP by deleting an
AflIII fragment from nucleotides 6054 to 7488 (Fig.
1A). pHIV-AP
env
R1 was derived from
pHIV-AP
env by inserting 4 bp at the unique EcoRI site
within Vpr at position 5743 with the Klenow fragment of
Escherichia coli DNA polymerase. pHIV-AP
env
Vif
Vpr
was derived from pHIV-AP
env by deleting the fragment from
NdeI (position 5123, within Vif) to EcoRI
(position 5743). pHIV-AP G-P-E-F-V- was derived from
pHIV-AP
env
Vif
Vpr by deleting the NsiI fragment
(positions 1251 to 4381), which encompasses Gag-Pol. pHIV-AP E-F-V-T-
was derived from pHIV-AP
env
Vif
Vpr by inserting 4 bp at the
MfeI site at position 5898, within the first exon of Tat.
pHIV-AP E-F-V-R- was made by inserting 4 bp at the BamHI
site (position 8465, within the second exon of Rev) of
pHIV-AP
env
Vif
Vpr. pHIV-AP E-F-V-R-T- was derived from
pHIV-AP
env
Vif
Vpr by deleting the sequence between the
NdeI site (position 5123) and the AflIII site
(position 7488). pHIV-PV was constructed in pCI (Promega Biotec) by
using the NL4-3 fragment from BssHII (position 711) to
XhoI (position 8887). A schematic of these HIV vectors is
shown in Fig. 1A. pHIV-CD4 was constructed by replacing the NotI-XhoI fragment (which encompasses AP) of
pHIV-AP
env
Vif
Vpr with the 1.4-kb BamHI fragment
encoding human CD4 of pBABEneoCD4 (a gift of J. Skowronski).
pHIV-AP
env
Vif
Vpr-BspEI was made by inserting 4 bp at the
BspEI site at position 308 of pHIV-AP
env
Vif
Vpr. These are shown in Fig. 1B. pHIV-AP
env D64V was constructed by replacing the 3.1-kb ApaI-SalI fragment of
pHIV-AP
env
Vif
Vpr with the 3.8-kb
ApaI-SalI fragment of pHIV-hygro D64V (a gift of
A. Leavitt). pME VSV G, encoding the VSV G glycoprotein, and pSV
A-Mo-MLV, encoding the MuLV amphotropic envelope, were gifts of K. Maruyama (DNAX) and D. Littman (New York University School of
Medicine), respectively.

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FIG. 1.
(A) HIV vector constructs. The parent construct was
HIV-AP (reference 15 and data not shown), which is
based upon NL4-3 (top). Deletions are indicated by delimited bars, and
each frameshift mutation is indicated by x. In pHIV-PV, CMV designates
the immediate-early cytomegalovirus promoter and polyA represents a
cellular polyadenylation addition site. Genes are not precisely to
scale. (B) HIV vectors with the 5' LTR BspEI site removed
(for PCR analysis) and with the marker human CD4 (for FACS analysis).
See the text for details.
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Preparation of vector supernatants.
Pseudotyped HIV
supernatants were made essentially as described previously, without the
addition of pcRev or butyrate (40). In brief, 293T cells
were transfected with up to three plasmids by calcium phosphate
coprecipitation. Supernatants were collected roughly 60 h later,
centrifuged at 2,000 × g for 5 min, and subjected to
titer determination with HOS cells by endpoint dilution. Before transduction of HSC, previously frozen viral stocks were concentrated 10-fold by ultrafiltration with Amicon Centriprep-10 units as specified
by the manufacturer. Alternatively, supernatants were concentrated by
ultracentrifugation with an SW28 rotor at 23,000 rpm at 4°C for
2 h and resuspended in 1/100 volume of IMDM by end-over-end
rotation at room temperature (RT) for 3 to 6 h.
Flow cytometry and marker analysis.
Cells transduced with
HIV-CD4 were pelleted by microcentrifugation for 5 s and incubated
for 1 h in 1:10 anti-CD4-phycoerythrin (PE) (Pharmingen) in
phosphate-buffered saline-2% fetal calf serum. For DNA content
measurements, washed cells were incubated at 37°C for 1 h in the
presence of 0.75 mM Hoechst dye 33342 (Molecular Probes). To
simultaneously measure the transduction efficiency and the number of
S-phase cells by bromodeoxyuridine (BrdU) incorporation, treated cells
were fixed with 0.3% formaldehyde-0.4% glutaraldehyde for 5 min at
RT, washed in phosphate-buffered saline, and incubated for 1 h in
anti-BrdU (Amersham) in the presence of 0.01% Tween 20 followed by
fluorescein isothiocyanate-conjugated anti-mouse immunoglobulin G
(FITC-IgG) (Sigma) for 1 h. Washed cells were incubated with
anti-CD4-PE as described above. Analyses were carried out on a FACStar
equipped with a UV laser for DNA content measurements or on a FACScan
with Lysis II software (Becton Dickinson). For alkaline phosphatase
staining, the cells were fixed as described above, heated at 65°C for
20 min, and incubated with
5-bromo-4-chloro-3-indolylphosphate/nitroblue tetrazolium (BCIP/NBT)
along with 0.24 mg of levamisole per ml as described previously,
usually for less than 2 h at RT (15). Alternatively,
Vector Red (Vector Labs) replaced BCIP/NBT. The capsid antigen
concentration in viral supernatants was measured with commercial
reagents (Coulter).
PCR marking.
Individual hematopoietic colonies were placed
in 50 µl of 0.1 M KCl-10 mM Tris HCl (pH 8.3)-2.5 mM
MgCl2-0.5% Tween 20-0.5% Nonidet P-40-100 µg of
proteinase K per ml and incubated overnight at 37°C. The forward and
reverse oligonucleotide primers for the HIV provirus were
5'-AAGAGGCCAAATAAGGAGAGAAGAACAG-3' (NL43-171U; positions 171 to 198) and 5'-ATCTAATTCTCCCCGCTTAATACCGAC-3' (NL43-831L; positions 804 to 831), respectively, which gave rise to a 660-bp product. PCR was performed for 40 cycles at a denaturing temperature of
94°C for 30 s, an annealing temperature of 62°C for 1 min, and
an extension temperature of 72°C for 1 min. The primers for
-globin were 5'-ACACAACTGTGTTCACTAGC-3' and
5'-CAACTTCATCCACGTTCACC-3' and gave rise to a 112-bp
product. PCR for this product was performed as described above, except
that the annealing temperature was 53°C. Alu-PCR was performed as
described previously (4), except that Taqpluslong
(Stratagene) was used in the initial PCR step and the second PCR step
was performed with 1% of the original product for 27 cycles. Products
obtained with the HIV primers were size separated by horizontal agarose
gel electrophoresis, transferred under alkaline conditions to Hybond
N+ (Amersham), and probed with a 32P-labelled
DNA fragment encompassing the 5' LTR of NL4-3. Washed filters were
exposed to X-ray film. For the
-globin product, samples were
fractionated on a 2.5% agarose gel and visualized by ethidium bromide
and UV light.
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RESULTS |
HIV(VSV G) efficiently transduces HSC.
To determine the
transduction rates of pseudotyped HIV vectors, an HIV provirus with a
1.45-kb deletion in gp160 and AP replacing Nef was constructed
(pHIV-AP
env; Fig. 1A). Typical endpoint titers for transiently
produced pHIV-AP
env(VSV G) were 2.0 × 107 to
3.0 × 107 IU/ml on HOS cell targets. Mobilized,
peripheral blood HSC, which were either CD34+ or
CD34+ Thy1+, were obtained from volunteer
donors. After isolation, the cells were placed in complete medium with
cytokines and transduced overnight with ultrafiltered,
10-fold-concentrated viral stocks in the presence of 4 µg of
Polybrene per ml immediately (time zero) or 24 or 48 h later.
Fixed cells were assayed for AP by BCIP/NBT staining 48 h after
the last time point. Although transduction rates were low at 0 and
24 h (roughly 5 and 10%, respectively), they were close to 50%
at 48 h, very similar for both CD34+ and
CD34+ Thy1+ cells (Fig.
2). Transduction was absolutely dependent
upon the presence of VSV G, and it was also dependent upon reverse
transcriptase, since the addition of zidovudine inhibited transduction
by more than 90%. pHIV-AP
env(A-Mo-MLV) typically gave two- to
threefold-lower transduction rates (data not shown). This may reflect
the lower titer of this viral stock (which was at most 1.0 × 107 IU/ml as determined with HOS targets) or less abundant
expression of the receptor for amphotropic virus envelope. To
demonstrate that the expression of AP was dependent on provirus
integration, an HIV construct in which one of the catalytic triad
residues of IN was changed (D64V) was obtained from A. Leavitt. This
virus has normal levels of reverse transcriptase activity but 1,000- to
10,000-fold-reduced titers on HOS cells (22). This mutation, when placed in the context of pHIV-AP
env
Vif
Vpr, reduced HSC transduction rates to 1 to 2% of the control values.

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FIG. 2.
Transduction increases if HSC are exposed to cytokines
for 2 days. CD34+ or CD34+ Thy1+
cells were placed into cytokine-containing medium, and at 0, 24, and
48 h ultrafiltered HIV-AP env(VSV G) was added for an overnight
incubation. For the bald virus, the VSV G expression plasmid was
omitted from the original transfection. To inhibit reverse
transcriptase, zidovudine (AZT) was added to a final concentration of
0.5 mM. All cell samples were fixed at 96 h, developed with
BCIP/NBT, and scored visually for a brownish-purple color change. At
least 100 cells were counted for each determination.
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Replication-competent virus is undetectable.
It is conceivable
that a double, nonhomologous crossover event could occur during the
transient transfection of the 293T cells with the VSV G envelope and
replication-defective HIV provirus plasmids, resulting in
replication-competent HIV with a wide host range and capable of
spreading infection. To test this remote possibility, 5 × 106 HOS cells were transduced with 5.0 ml of
pHIV-AP
env
Vif
Vpr(VSV G) with a titer of 3 × 107 IU/ml such that more than 95% of the targets were
transduced. A 10-ml volume of supernatant from these transduced targets
was used to transduce 5 × 106 naive HOS cells, and
the resulting titer was 103 IU/ml. This process was
performed iteratively, and by the fourth round, the titer was
undetectable. In addition, the >95% transduced HOS cells described
above were serially passaged 1:4 or 1:8 every 3 to 5 days. Each week, 1 ml of supernatant was used to transduce naive HOS cells, with a
resulting titer of <10 IU/ml, which did not change over a 5-week
period. In addition, the few HOS cells that were transduced were
passaged as described above, and the number of positively staining
cells remained stable over an 8-week period. The lack of viral spread
suggests that the few events observed were a result of
non-envelope-mediated viral entry (i.e., endocytosis of
envelope-negative, replication-defective virus).
Transduction of HSC by HIV is cell cycle independent.
One of
the principal reasons for developing lentivirus vectors is to exploit
their ability to transduce nondividing targets. However, the results
shown in Fig. 2 suggested that transduction may be cell cycle
dependent. To address this question, purified HSC were placed in
culture with cytokines and incubated 24 h later with increasing
concentrations of aphidocolin (S-phase inhibitor). The cells were then
transduced overnight in the presence of aphidocolin, refed, and stained
for AP activity 24 h later. No clear inhibition of transduction was
observed, as measured by BCIP/NBT or Vector Red staining (Fig.
3). To further explore this issue, a
replication-defective HIV was constructed with CD4 as a marker for
fluorescence-activated cell sorter (FACS) analysis (Fig. 1B).
CD34+ cells were transduced with HIV-CD4(VSV G) overnight,
and stained for DNA content with Hoechst dye 33342 and CD4 expression
48 h later. As shown in Fig. 4, the
DNA content of transduced cells was almost identical to that of
nontransduced cells (and the population as a whole). This is consistent
with transduction being independent of the cell cycle. However, in this
experiment, we could not determine the precise stage the cells were in
when they were transduced. To do this, CD34+ cells were
labelled with BrdU at the same time as they were transduced overnight
with HIV-CD4(VSV G). At 48 h later, fixed cells were labelled with
anti-BrdU and then with FITC-IgG. Washed cells were then incubated with
anti-CD4-PE and analyzed by flow cytometry. The results in Fig.
5 indicate that labelling by BrdU and
transduction were independent events. Similar results were obtained
with a 4-h labelling-transduction period, although the proportion of the cells which were labelled or transduced was lower.

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FIG. 3.
Aphidocolin does not inhibit transduction. Increasing
amounts of aphidocolin (Sigma) were added to CD34+
Thy1+ cells 1 day before overnight transduction with
concentrated HIV-AP env(VSV G) and left in the medium until fixation
was carried out. Transduction was scored by BCIP/NBT or Vector Red
staining as specified by the manufacturer. Vector Red caused positive
cells to be bright red, and they were easily visible by light
microscopy.
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FIG. 4.
Transduced cells have a DNA content profile similar to
that of untransduced cells. CD34+ cells were transduced
overnight with ultracentrifuge-concentrated bald HIV-CD4 (left) or
HIV-CD4(VSV G) (right). Two days later, the cells were analyzed by flow
cytometry on a FACStar equipped with a UV laser. For CD4 measurements,
the primary antibody was mouse anti-CD4-PE used at a 1:10 dilution.
For DNA content measurement, the cells were incubated with 0.75 mM
Hoechst dye 33342 (Molecular Probes) for 1 h at 37°C. Only live
cells were quantified; they were gated by exclusion of the dye
propidium iodide. N.D., not determined.
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FIG. 5.
Transduction is independent of the S phase.
CD34+ cells were transduced overnight with
ultracentrifuge-concentrated bald HIV-CD4 (mock) or HIV-CD4(VSV G) and
at the same time incubated in the presence or absence of 30 µg of
BrdU per ml. Two days later, the cells were fixed and incubated with
mouse anti-BrdU followed by FITC-IgG. After further washing, the cells
were incubated with mouse anti-CD4-PE (1:10 dilution) and analyzed by
flow cytometry on a FACScan. Similar results were obtained in a 4-h
experiment. BrdU-positive cells represent those that were in the S
phase.
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Stable expression is dependent upon deletion of Vif and Vpr.
To determine the stability of expression of the introduced marker gene,
CD34+ cells were transduced overnight with
pHIV-AP
env
R1(VSV G) or bald virus. This HIV construct has a
frameshift in Vpr at the EcoRI site and functionally behaves
as a Vpr
virus in established cell lines in that
transduced cells do not undergo cell cycle arrest but instead have
normal growth properties. A 50% transduction rate was confirmed
48 h later, and the cells were plated into methylcellulose in the
presence of IL-3, IL-6, stem cell factor, GM-CSF, and erythropoeitin to
allow colony differentiation and proliferation. Two weeks later, colony
types were counted and stained for AP activity. To our surprise, the
cells transduced with VSV G-pseudotyped virus produced roughly 50%
fewer colonies of each type than did the cells transduced with
otherwise identical bald virus (Fig. 6).
Very few of the colonies stained positive for AP, and those colonies
were minute (fewer than 50 cells). This result, reproduced several
times, suggested that there was a cytotoxic or cytostatic gene product
present within pHIV-AP
env
R1 which did not allow for expansion of
transduced cells. We then made a series of deletion and frameshift
vector constructs (Fig. 1A) and tested them for initial transduction
efficiency and stability of expression by bulk culture and by colony
formation in methylcellulose. As shown in Table
1, each construct, pseudotyped with VSV
G, had a different titer on HOS cells and a different initial
transduction efficiency on CD34+ cells, with
pHIV-AP
env
Vif
Vpr being superior in this respect. AP expression
was monitored in bulk culture for 4 weeks. For each of the constructs
in Fig. 1A, there was a decay in the proportion of cells with
detectable expression (Fig. 7). This
decay was most pronounced and significant for pHIV-AP
env
R1
(compared to pHIV-AP
env
Vif
Vpr), consistent with the results
described above. On day 3, a fraction of the transduced cells were
plated into methylcellulose and examined for AP expression after 3 weeks. The percent AP-positive colonies mirrored what was observed in
bulk culture (data not shown), although there was a subpopulation of
sectored colonies. These results suggest that either Vif or the amino
terminus of Vpr is cytotoxic or cytostatic to CD34+ cells.

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FIG. 6.
Transduction by HIV-AP env R1(VSV G) results in
cytotoxicity. CD34+ Thy1+ cells were transduced
overnight with ultrafiltered bald or HIV-AP env R1(VSV G). Three
days later, the cells were plated into methylcellulose. Colony types
and AP staining were determined 2 weeks later. GM,
granulocyte-macrophage; E, erythroid; mixed, mixed cell types. Only a
few AP+ colonies were observed, and these were small
compared to AP colonies. This experiment was repeated
twice more with CD34+ cells, and similar results were
obtained.
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FIG. 7.
Expression of AP marker declines over time.
CD34+ cells were transduced in triplicate overnight with
ultracentrifuge-concentrated VSV G pseudotyped HIV vectors (Table 1).
Note that the viruses HIV-AP G-P-E-F-V-, HIV-AP E-F-V-T-, HIV-AP
E-F-V-R-, and HIV-AP E-F-V-R-T- were produced by cotransfection with
pHIV-PV (Fig. 1A) and pME VSV G. After transduction, the cells were
either plated out into methylcellulose and 3 weeks later stained for AP
with BCIP/NBT or maintained in bulk culture in the presence of IL-3,
IL-6, and stem cell factor and periodically stained for AP. No staining
was observed for cells infected with bald HIV-AP env Vif Vpr
(data not shown). For each construct, the percentage of AP+
colonies observed in methylcellulose was similar to what was seen in
bulk culture. *, P < 0.0001 compared to
HIV-AP env Vif Vpr; **, P > 0.05 compared to
HIV-AP E-F-V-R- but P < 0.0001 compared to
HIV-AP env Vif Vpr; §, P < 0.0001 for both
HIV-AP R1 and HIV-AP E-F-V-R-T- compared to
HIV-AP env Vif Vpr (all results obtained by two-way
balanced analysis of variance). Error bars have been omitted for
clarity.
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Because we could not distinguish decay in the expression of the marker
gene from a defect in survival expansion of the transduced cells, we
wished to determine the transduction rate by PCR marking. Because we
had great difficulty in removing all contaminating DNA from the
original transfection of the 293T producers, we eliminated the
BspEI site in the 5' LTR (pHIV-AP
env
Vif
Vpr-BspEI
[Fig. 1B]). Using PCR primers which flank this site, we would thus be able to differentiate between contaminating DNA and complete proviral replication by measuring the susceptibility of the PCR product to
BspEI digestion. CD34+ cells were transduced
with either pHIV-AP
env
Vif
Vpr-BspEI(VSV G) or
pHIV-AP
env
Vif
Vpr-BspE1(bald), treated with DNase I to remove most of the contaminating DNA from the original transfection, and plated into methylcellulose. In this experiment, the initial transduction rate was 42%. At 3 weeks, 24% of the colonies stained positive for AP activity. At the same time, individual colonies were
picked and PCR was performed as described in Materials and Methods. The
PCR products were then digested with BspEI. As shown in Fig.
8A, the transduction rate (as measured by
PCR) for pHIV-AP
env
Vif
Vpr-BspEI(VSV G) was 91% (10 of 11),
since all but one of the samples which were positive for the
-globin
product were also positive for the HIV product. All other colonies were
positive for the control
-globin product (data not shown). In a
second experiment, the PCR marking rate was 100% (12 of 12). No
attempt was made to determine the copy number per colony. To show that
the provirus had integrated, nested Alu-PCR was performed with the DNA
from these colonies. This technique relies on the fact that in most
cases there will be an Alu repeat relatively close to the integrated
provirus. Nested primers present within the LTR are then used to
amplify a product of a specific size (4). As shown in Fig.
8B, DNA from 10 of 12 colonies gave a product of the expected size, as visualized by ethidium bromide staining of the agarose gel. This suggests that in this clonogenic assay, expression of the transgene carried by the integrated HIV provirus in a majority of the transduced cells had been suppressed to a level below the limit of detection.

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FIG. 8.
PCR assays for vector proviruses in MC colonies.
CD34+ cells were transduced overnight with
ultracentrifuge-concentrated HIV-AP env Vif Vpr-BspE1(VSV G) or
the bald control virus stock, treated with DNase 1 at 100 µg/ml in
the presence of 5 mM MgCl2 for 24 h, and then plated
into methylcellulose. (A) Colonies contain fully replicated forms of
HIV provirus. In this experiment, 42% of the cells initially stained
positive for AP. Three weeks later, DNA was prepared from individual
colonies and PCRs were carried out with primers NL43-171U and NL43-831L
as described in Materials and Methods. At that time, only 24% of the
colonies stained positive for AP. A portion of each PCR product was
digested with BspEI, size fractionated on a 1.2% agarose
gel, transferred to Hybond N+ (Amersham), and hybridized to
a 32P-labelled DNA probe encompassing the HIV-1 LTR. The
filter was washed with 0.2× SSC (1× SSC is 0.15 M NaCl plus 0.015 M
sodium citrate)-0.1% sodium dodecyl sulfate at 65°C for a total of
30 min and exposed to X-ray film for 20 min. First 12 lanes, bald
virus; last 12 lanes, HIV-AP env Vif Vpr-BspE1(VSV G). The
expected product size prior to BspEI digestion is 660 bp;
after digestion, it is 523 bp. None of the first 12 and 10 of the last
12 reactions were judged to be positive. When -globin control
primers were used, only one sample was negative. (B) Colonies contain
integrated forms of HIV provirus. In this experiment, the initial
transduction rate was 65% and at 3 weeks 24% of the colonies stained
positive for AP. DNA was prepared from individual colonies, and all 24 were positive when the -globin control primers were used. None of
the mock-transduced and all 12 of the
HIV-AP env Vif Vpr-BspE1(VSV G)-transduced colonies were positive
by PCR with the primers used in panel A. Samples were then subjected to
Alu-PCR as described previously (4), and the products were
size fractionated on a 1.5% agarose gel prestained with ethidium
bromide. None of the mock-transduced and 10 of 12 HIV-AP env Vif Vpr-BspE1(VSV G)-transduced colonies gave the
expected size of product, as indicated.
|
|
 |
DISCUSSION |
We demonstrate efficient transduction of purified human HSC by HIV
vectors pseudotyped with VSV G. Titers of transiently produced pseudotyped HIV reported here are equivalent to or greater than those
previously reported (1, 28, 29, 34), which may reflect the
nature of the enzymatic marker AP. In studies with CD34+
cells, the HIV proviral construct simply had a deletion in Env, with
the marker gene inserted within Env or Nef, and the stability of marker
gene expression was not examined. In the results reported here, since
more of the HIV genome was deleted from the vector, the titer was
reduced accordingly, which may be due in part to inefficient
cotransfection of the 293T producer cells, with the plasmid providing
complementing functions in trans. Alternatively, packaging
or reverse transcription of deleted vectors may not be optimal. The
transduction rates we observed for HSC exceeded those of other
currently used retroviruses (6, 12, 20, 21, 27) and were
roughly equivalent to those of other viral vector systems in use
(3, 7, 13, 26, 30, 45). These are likely to be true
transduction rates, since they were dependent upon both reverse
transcriptase and integrase. We were surprised that the titers of the
Tat
HIV construct (pHIV-AP E-F-V-T-) were reduced 30- to
50-fold on HOS cell targets whereas CD34+ transduction
rates were diminished only 2- to 3-fold. The Tat
virus
was prepared by cotransfection of the pHIV-PV construct, which has an
intact Tat gene, so that production of the virus would presumably not
be limiting. It is possible that the AP assay is more sensitive and
nonlinear than measurements of transcript abundance. Readthrough
transcription from bona fide or fortuitous promoters in cellular
flanking sequences followed by conventional splicing would also yield
an AP-positive cell. The titers of the construct lacking functional Tat
and Rev were reduced 100-fold on HOS cells and gave very poor
transduction rates on HSC.
The transduction rates in our experiments were reproducibly higher if
HSC were preactivated with cytokines for 48 h. However, this high
transduction rate was independent of mitosis in that aphidocolin, an
S-phase inhibitor, had no consistent effect on the transduction
efficiency. In addition, transduced cells had nearly the same DNA
content profile as untransduced cells, with an insignificant bias
toward the S, G2, and M phases. Furthermore, transduction
by HIV(VSV G) was independent of the S phase, as indicated by the BrdU
labelling experiment. These results, taken together, are consistent
with previous findings that HIV can infect nondividing cells. It is not
clear why we observed a requirement for the cells to be cultured in the
presence of cytokines for a few days for maximal transduction rates,
which is at odds with the results discussed above (34).
However, the CD34+ cells were prepared and transduced in a
slightly dissimilar manner, and different markers and detection systems
were used. More than 99% of freshly isolated HSC are in the
G0/G1 (presumably G0) phase as
measured by DNA content analysis (34, 42). HSC require cytokines both to prevent apoptosis and to enter G1. The
results presented here may be reconciled with the findings that
efficient, complete transduction by HIV probably requires the target
cell to be transcriptionally active and at least in G1 (out
of G0) (38, 39, 41). HIV can enter
G0 CD4+ T cells and macrophages, but reverse
transcription and expression of viral gene products are limited
(41, 47). Importantly, these cells need not traverse mitosis
for nuclear entry and expression of viral genes to take place. Thus, if
transduction is measured by transgene expression (as it was in most
cases here), a requirement for an activated state and consequent
transcription but not mitosis is observed.
We also demonstrate that expression of the transgene wanes over the
course of several weeks, so that an initial transduction rate measured
by expression of more than 50% (as an example) declines to a
proportion of 25% at 3 weeks. It is not known whether expression diminishes further over more extended times. However, transduction measured by PCR marking remained high. It is uncertain which features of the virus (or host cell) cause extinction of viral gene expression, but this phenomenon is generally observed for the retroviruses and
remains problematic for their use as gene transfer agents. An
unexpected finding presented here is that HIV-1 contains a gene product
which is selectively cytotoxic to HSC. This product is not Tat or the
carboxy terminus of Vpr, which have been shown in other cell types to
cause apoptosis (24, 32, 46) and G2/M arrest
(14, 17, 25, 33), respectively. Based on the series of
deletion constructs, the cytotoxic product is either Vif or the amino
terminus of Vpr. Other experiments suggest that this property maps
within Vif, not Vpr (data not shown). Although Vif is highly conserved
among different HIV-1 isolates and is present in other lentiviruses,
its role in the viral life cycle remains poorly defined. Vif is
required for viral replication in primary cell types and is critical
for proviral DNA synthesis in selected target cells (44).
The cytotoxicity of certain HIV-1 isolates has been mapped to the Vif
gene product (36), with the cytopathic effect being
manifested as loss of cell viability and giant cell formation. Others
have reported that cell clones that survive the initial cytopathic
effect harbor HIV species which have individual mutations in accessory
gene products, including Vif (18, 19). However, toxic
effects of Vif are not consistently seen (44), and we do not
observe the cytotoxic effect of Vif in established human and mouse cell
lines. For the HSC transduced with Vif+ HIV, multinucleated
giant cells were not observed, but we do not yet know the cause of the
loss of cell viability. These results do suggest, however, that
deletion of Vif is a requisite for maintenance of the transduced HSC
population and hence for expression of the transgene.
We have yet to detect replication-competent virus present in the
transient-transfection viral supernatants. This has also been true for
similar HIV vector systems, which have larger deletions of the provirus
(5, 28, 29, 31). It remains possible that
replication-competent virus exists at a level of 10
9 or
10
10 (representing 30 or 300 ml of viral supernatant,
respectively) and that the assay used here is not sensitive enough to
detect these rare occurrences. It is also conceivable that a target
cell could express an endogenous envelope so that cells transduced with
pHIV-AP
env would produce virus of altered tropism but would still be
replication defective. It is thus most desirable to use a vector such
as pHIV-AP G-P-E-F-V- or the previously described transfer vector
(29), which has a minimum of residual HIV sequence. Packaging cell lines with HIV core proteins and HIV envelopes have been
described, but the host range of the replication-defective virus was
more restricted and the titers were reduced at least 1,000-fold
compared to HIV(VSV G) pseudotypes (5, 31). Transient production of viral supernatants is clearly advantageous for vector development, but it will be desirable ultimately to generate suitable HIV packaging cell lines of wide host range in a bioreactor system, as
has been demonstrated for MuLV (8).
 |
ACKNOWLEDGMENTS |
We thank A. Leavitt, N. Landau, and D. Littman for generous gifts
of reagents; R. Pillai and other members of the Brown laboratory for
helpful discussions; C. Dowding for purified HSC; M. Reitsma for FACS
analysis; and R. Tushinski for advice on HSC culture and assay
reagents.
H.T.M.W. was supported by a Howard Hughes Medical Institute (HHMI)
summer undergraduate fellowship program sponsored by Stanford University; R.E.S. was a Pfizer postdoctoral scholar and was supported by NIH grant CA71671. P.O.B. is an investigator of the HHMI. This work
was funded in part by NIH grant AI36898.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: 253 Beckman
Center, Stanford University Medical Center, Stanford, CA 94305. Phone: (650) 725-7569. Fax: (650) 723-1399. E-mail:
sutton{at}cmgm.stanford.edu.
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J Virol, July 1998, p. 5781-5788, Vol. 72, No. 7
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
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