Previous Article | Next Article 
J Virol, May 1998, p. 3999-4004, Vol. 72, No. 5
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Predominance of HLA-Restricted Cytotoxic T-Lymphocyte Responses
to Serotype-Cross-Reactive Epitopes on Nonstructural Proteins following
Natural Secondary Dengue Virus Infection
Anuja
Mathew,1
Ichiro
Kurane,1,
Sharone
Green,1
Henry A. F.
Stephens,2
David W.
Vaughn,3
Siripen
Kalayanarooj,4
Saroj
Suntayakorn,5
Dasnayanee
Chandanayingyong,6
Francis A.
Ennis,1 and
Alan L.
Rothman1,*
Center for Infectious Disease and Vaccine Research,
University of Massachusetts Medical Center, Worcester,
Massachusetts1;
Division of Nephrology,
The Middlesex Hospital, London, United
Kingdom2; and
Department of
Virology, Armed Forces Research Institute of Medical
Sciences,3
Queen Sirikit National
Institute for Child Health (formerly Bangkok Children's
Hospital),4 and
Department of
Transfusion Medicine, Siriraj Hospital,6
Bangkok, and
Kamphaeng Phet Provincial Hospital, Kamphaeng
Phet,5 Thailand
Received 23 December 1997/Accepted 9 February 1998
 |
ABSTRACT |
We examined the memory cytotoxic T-lymphocytic (CTL) responses of
peripheral blood mononuclear cells (PBMC) obtained from patients in
Thailand 12 months after natural symptomatic secondary dengue
virus infection. In all four patients analyzed, CTLs were detected in bulk culture PBMC against nonstructural dengue virus proteins. Numerous CD4+ and CD8+ CTL lines were
generated from the bulk cultures of two patients, KPP94-037 and
KPP94-024, which were specific for NS1.2a (NS1 and NS2a collectively)
and NS3 proteins, respectively. All CTL lines derived from both
patients were cross-reactive with other serotypes of dengue virus. The
CD8+ NS1.2a-specific lines from patient KPP94-037 were HLA
B57 restricted, and the CD8+ NS3-specific lines from
patient KPP94-024 were HLA B7 restricted. The CD4+ CTL
lines from patient KPP94-037 were HLA DR7 restricted. A majority of the
CD8+ CTLs isolated from patient KPP94-024 were found to
recognize amino acids 221 to 232 on NS3. These results demonstrate that in Thai patients after symptomatic secondary natural dengue infections, CTLs are mainly directed against nonstructural proteins and are broadly
cross-reactive.
 |
INTRODUCTION |
Dengue hemorrhagic fever (DHF), the
severe form of dengue illness, is hypothesized to be the result of the
overactivation of the immune system (15). In its most
serious form, dengue shock syndrome (DSS), the plasma leakage of DHF
leads to shock and can be life threatening. Dengue virus infections are
commonly seen in South Asia, Southeast Asia, the Caribbean, and South
America. In the United States, the disease is seen in residents
returning from travel to tropical countries. Antibodies to one serotype of dengue virus have been shown to enhance infection with another serotype of dengue virus in vitro by a process known as
antibody-dependent enhancement (9). Epidemiological
observations suggest that antibodies capable of mediating
antibody-dependent enhancement in vitro are a risk factor for
developing DHF or DSS and that complications of dengue illness are more
commonly seen in secondary infections (20). These
observations suggest that vaccines against dengue should induce
protection against all four serotypes.
Our laboratory has been involved in the understanding of the human
CD4+ and CD8+ cytotoxic T-lymphocyte (CTL)
responses to dengue virus infection. We have identified
CD4+ and CD8+ T-cell responses to several
proteins of dengue virus in previously unexposed healthy Caucasians who
received live candidate monovalent dengue virus vaccines (6,
19). These studies have shown a predominance of recognition of
serotype-cross-reactive epitopes on the nonstructural proteins
NS3 and NS1.2a (NS1 and NS2a collectively), with less prominent
recognition of serotype-specific epitopes on structural proteins.
We hypothesize that the cross-reactive T cells from the primary
dengue virus infection are reactivated during a secondary infection and
play a role in recovery from and/or immunopathology of infection.
We therefore examined dengue virus-specific CTL responses
in peripheral blood mononuclear cells (PBMC) of four children 12 months
after a secondary natural infection obtained as part of a prospective
study of dengue virus infections in Thailand (10). In all
four patients, CTLs were detected in bulk culture against at least one
protein of dengue virus. In two of these patients, limiting-dilution
cloning experiments generated numerous CD4+ and
CD8+ CTL lines directed against
serotype-cross-reactive epitopes on the nonstructural proteins NS1.2a
and NS3. These results are consistent with our hypothesis that
cross-reactive cells from the primary infection are reactivated
after a secondary infection. This is the first report of dengue
virus-specific CTL responses after natural secondary dengue virus
infections.
 |
MATERIALS AND METHODS |
Viruses.
Dengue 2 (D2) virus (New Guinea C strain) was
provided by Walter E. Brandt (Walter Reed Army Institute of Research).
Dengue 4 (D4) virus (Caribbean strain 814669) was provided by Jack
McCown (Walter Reed Army Institute of Research). Viruses were
propagated as previously described (13) and frozen at
70°C until use. Recombinant vaccinia viruses containing genes
coding for dengue virus proteins produced as described previously
(Vac.D2NS3 [vaccinia virus expressing D2 virus NS3], etc.) were
kindly provided by C. J. Lai (National Institutes of Health,
Bethesda, Md.), Enzo Paoletti (Virogenetics Corporation, Troy, N.Y.),
and Margo A. Brinton (Georgia State University, Atlanta) (5, 22,
23).
Study protocol and PBMC.
Blood samples were obtained from
children enrolled in a prospective study of dengue virus infections at
the Queen Sirikit National Institute for Child Health (formerly Bangkok
Children's Hospital), Bangkok, Thailand, and the Kamphaeng Phet
Provincial Hospital, Kamphaeng Phet, Thailand, in 1994 (10).
Children with fever of 72 h or less in duration without an obvious
cause and facial flushing were eligible to participate in this study. A diagnosis of acute dengue virus infection was based on serologic tests
(antibody capture enzyme immunoassay and hemagglutination inhibition)
and isolation of dengue virus (in Toxorhynchites splendens mosquitoes) (21). A diagnosis of secondary dengue virus
infection was made on the basis of (i) a dengue virus immunoglobulin M
(IgM)-to-IgG ratio of <1.8:1; (ii) with serial specimens, a twofold
increase in IgG to dengue virus, with an absolute value of
100 U in
the absence of IgM to dengue virus of
40 U; and (iii) a
hemagglutination inhibition titer of >1:1,280 1 week after the onset
of illness. Written consent was obtained from each subject's parents
or guardians. The study protocol was approved by the Institutional
Review Boards established by the Ministry of Health, Thailand, the
Surgeon General's Office of the Department of the Army, and the
University of Massachusetts Medical Center. PBMC obtained 12 months
after dengue virus infection were separated and cryopreserved at
70°C until further use. Frozen PBMC samples were shipped to the
University of Massachusetts Medical Center for testing. HLA-A, -B, and
-C class I typing was performed by using a standard
microlymphocytotoxicity assay, and HLA class II typing was performed by
PCR-based amplification and hybridization with HLA allele DRB1, DRB3,
DRB5, DQA1, DQB1, and DPB1 sequence-specific oligonucleotide probes as
previously described (3). Four subjects with documented
secondary D2 or D4 virus infections were selected for this study (Table
1).
Bulk culture of PBMC.
PBMC were initially cultured with 0.25 ml containing approximately 107 focus-forming units of the
homologous infecting serotype of dengue virus in 0.75 ml of AIM-V
medium (GIBCO BRL Life Technologies, Gaithersburg, Md.) containing 10%
heat-inactivated human AB serum (Hu ABS; Advanced Biotechnologies,
Inc., Columbia, Md.). PBMC were then restimulated 7 to 9 days later
with 106 gamma-irradiated (3,500 Rad) allogeneic PBMC and
anti-CD3 monoclonal antibody 12F6 (0.1 µg/ml), kindly provided by
Johnson Wong, in 0.5 ml of fresh medium containing 10% Hu ABS and 25 to 50 U of recombinant interleukin-2 (IL-2; Collaborative Biochemical
Products, Bedford, Mass.) per ml as indicated previously
(24). Bulk cultures were restimulated every 2 weeks. Cells
were assayed 7 to 10 days after the last restimulation for cytolytic
activity in CTL assays.
Cloning of PBMC.
PBMC which had been stimulated in bulk
culture for 7 days were collected and plated at a concentration of 10 and 30 cells per well in 96-well round-bottom microtiter plates
(Costar, Cambridge, Mass.) in 200 µl of AIM-V medium containing 10%
Hu ABS, 105 allogeneic gamma-irradiated PBMC, anti-CD3 (0.1 µg/ml), and recombinant IL-2 (25 U/ml) (24). Every 3 to 4 days, cells were fed with fresh AIM-V medium containing 10% Hu ABS and
IL-2 (25 U/ml). Cells were restimulated every 2 weeks. The T-cell lines
were initially screened with vaccinia virus recombinants expressing
dengue virus proteins. Growing cells that showed positive lytic
activity against any dengue virus proteins were expanded into 48-well
plates (Costar) and restimulated with 106 allogeneic PBMC
and anti-CD3 at a final volume of 1 ml.
Preparation of target cells.
B-lymphoblastoid cell lines
(BLCLs) were established by culturing PBMC with Epstein-Barr virus in
48-well plates (7). Allogeneic BLCLs were also obtained from
the National Institutes of General Medical Sciences Human Genetic
Mutant Cell Repository or the American Society for Histocompatibility
and Immunogenetics Cell Bank and Repository. BLCLs (3 × 105 to 5 × 105) were infected with
vaccinia viruses for 1.5 to 2 h at 37°C and then diluted in 2 ml
of RPMI 1640-10% fetal bovine serum medium (Sigma Immunochemicals,
St. Louis, Mo.) and further incubated for 12 to 16 h. Target cells
were labeled with 0.25 mCi of 51Cr for 60 min at 37°C.
After three washes, the target cells were counted and diluted to
104 cells/ml for use in cytotoxicity assays.
51Cr release cytotoxicity assay.
Cytotoxicity
assays were performed in 96 round-bottom wells as previously reported
(2, 19). Effector cells were added to 103
51Cr-labeled target cells at various effector-to-target
(E/T) ratios. In CTL assays with synthetic peptides, peptides were
added at 25 µg/ml to target cells and incubated at 37°C for 30 min,
after which effector cells were added. Plates were centrifuged at
200 × g for 5 min and incubated 4 to 5 h at
37°C. Supernatant fluids were harvested by using the Skatron
Instruments (Sterling, Va.) supernatant collection system, and
51Cr content was measured in a gamma counter. The percent
specific 51Cr release was calculated as 100 × (cpm
experimental release
cpm spontaneous release)/(cpm maximum
release
cpm spontaneous release). All assays were performed in
triplicate, and the results were calculated from the average of the
triplicate wells. The standard error of the mean was <10% in all
experiments.
 |
RESULTS |
Protein specificity of CTLs generated from convalescent
PBMC of children after natural secondary dengue virus
infection in Thailand.
To detect dengue virus-specific CTL,
we stimulated convalescent PBMC with the homologous dengue virus
and tested for cytolytic activity in bulk culture against the
homologous dengue virus proteins. We detected CTL activity in bulk
culture PBMC from patient KPP94-037 against target cells infected with
Vac.D2NS1.2a and to those infected with Vac.D2NS3 to a lesser degree
(Table 2). For patients KPP94-024 and
CHD94-020, the predominant CTL response was directed against the
homologous NS3 protein (Table 2). For patient CHD94-134, low-level CTL
activity was detected in bulk culture against all dengue virus-vaccinia
virus recombinants tested. These results show that in bulk culture
experiments, PBMC of all four patients had detectable cytolytic
activity against target cells expressing nonstructural proteins NS1.2a
and/or NS3.
Cross-reactivity of T-cell lines established from PBMC of patients
KPP94-037 and KPP94-024.
T-cell lines were established by
limiting dilution from the bulk cultures obtained from patients
KPP94-037 and KPP94-024. For patient KPP94-037, the
lines were initially screened against Vac.control, Vac.D2NS3, and
Vac.D2NS1.2a. All lines that had positive lytic activity
were found to be directed against the nonstructural proteins NS1.2a
(data not shown). Among 12 T-cell lines, four lines had the
CD3+ CD4+ CD8
phenotype and eight
lines had the CD3+ CD4
CD8+
phenotype (Table 3). The
NS1.2a-specific CTL lines were tested for cross-reactivity against
Vac.D1ENS1.2a and Vac.D4NS1.2a constructs. Recognition of NS1.2a by all
the T-cell lines was cross-reactive to D1, D2, and D4 viruses (Table
3).
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TABLE 3.
Cross-reactivity of T-cell lines generated from PBMC of
patient KPP94-037 1 year after dengue
virus infectiona
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|
For patient KPP94-024, 12 NS3-specific T-cell lines were similarly
isolated after initial screening against target cells infected
with
Vac.control and Vac.D2NS3 (data not shown). These T-cell
lines were
then tested for cross-reactivity to other dengue virus
serotypes (Table
4). All of the CTL lines were
cross-reactive
for D3 and D4 viruses. These results indicate that all
the dengue
virus-specific T-cell lines established from patient
KPP94-037
were serotype cross-reactive and recognized the NS1.2a
proteins
and that those established from PBMC of patient KPP94-024 were
also serotype cross-reactive but recognized the NS3 protein. Protein
recognition of T-cell lines from donors KPP94-037 and KPP94-024
were
consistent with the recognition of bulk culture CTLs shown
in Table
2.
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TABLE 4.
Cross-reactivity of CTL lines generated from PBMC of
patient KPP94-024 1 year after dengue
virus infectiona
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|
HLA restriction of the lysis of target cells by
CD8+ and CD4+ CTL lines from PBMC of
patients KPP94-037 and KPP94-024.
For patient KPP94-037,
allogeneic BLCLs which had HLA alleles in common with autologous
cells were infected with Vac.D2NS1.2a and used as targets. Table
5, experiment 1, shows that three representative CD8+ lines were HLA B57 restricted because
only targets having B57 in common with the autologous BLCLs were lysed
efficiently by CD8+ CTLs. Experiments 2 and 3, using
allogeneic BLCLs that had class II alleles in common with the
autologous line, indicate that two of the CD4+ CTL lines
from patient KPP94-037 were HLA DR7 restricted. For patient KPP94-024,
allogeneic BLCLs sharing common class I alleles with autologous BLCLs
were infected with D2NS3. Four representative CD8+ lines
generated from patient KPP94-024 were B7 restricted (Table 5,
experiments 4 and 5). All CD8+ lines established from
patient KPP94-037 were B57 restricted, and all lines established from
patient KPP94-024 were B7 restricted (data not shown).
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TABLE 5.
HLA restriction of recognition of dengue virus proteins
by CTL lines of patients KPP94-037 and KPP94-024a
|
|
Cross-reactivity, HLA restriction, and epitope analysis of bulk
culture CTL generated from PBMC of patient CHD94-020.
For patient
CHD94-020, bulk culture CTLs lysed targets expressing the NS3 proteins
of D2, D3, and D4 viruses (Tables 2 and 6). Using recombinant vaccinia viruses
expressing truncated D3NS3, we were able to localize a CTL epitope to
amino acids (aa) 1 to 176 of NS3 (Table 6, experiment 2). Using
allogeneic targets having HLA class I alleles in common with CHD94-020,
we found bulk culture CTL activity to be HLA A11.1 restricted, based on recognition of CHD94-134 BLCL target cells, which share only A11.1 in
common with the autologous line (Table 6, experiment 3). These results
indicate that the NS3-specific CTLs detected in bulk culture from this
subject are A11.1 restricted and are also serotype cross-reactive. We
tried to isolate CTL lines from this donor by the limiting-dilution method but were not successful.
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TABLE 6.
Cross-reactivity, epitope localization, and HLA
restriction of bulk culture CTL obtained from PBMC of
patient CHD94-020a
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|
Localization of the epitope within the NS3 protein recognized by
T-cell lines from PBMC of patient KPP94-024.
CTL lines from
patient KPP94-024 lysed target cells expressing NS3; therefore, we
infected target cells with vaccinia virus recombinants expressing
truncations of the D3NS3 gene to localize the epitopes recognized by
these CTL lines. We mapped the region on the NS3 protein recognized by
all T-cell lines tested from patient KPP94-024 to aa 216 to 247 of NS3
(Table 7, experiment 1). We then checked
for CTL activity against overlapping peptides which spanned that region
and found lytic activity only against peptide 221, which is a 15-mer
corresponding to aa 221 to 235 (LAPTRVVAAEMEEAL) (data not
shown). We used synthetic peptides with truncations of peptide
221 to detect the minimum epitope recognized by the T-cell lines (Table
7, experiments 2 and 3). Peptide targets pulsed with truncations 221g
and 221f were lysed by most CTL, whereas target cells pulsed with
truncations 221a, 221c, and 221d were not lysed. T-cell lines 2F5 and
3C3 recognized aa 222 to 230 of NS3, and most of the other T-cell lines
recognized targets that were pulsed with aa 221 to 232 of NS3.
 |
DISCUSSION |
Most of the research performed on human T-cell cytotoxic responses
to dengue viruses has been in Caucasian volunteers who received
experimental live monovalent dengue virus vaccines. These individuals
had no known prior exposure to dengue viruses and therefore received
the dengue virus vaccine as a primary infection. However, the
complications seen in dengue virus infection (DHF and DSS) are more
common in patients who have preexisting immunity to one serotype of
virus during infection with another serotype (secondary infection) of
virus (8). Virus-specific memory T cells have been
implicated in contributing to the pathogenesis of severe dengue virus
infection (16). Analysis of T-cell responses in patients
after natural secondary infections is therefore important because it
may provide insights into the mechanisms of T-cell-mediated immunopathology. In this study, memory CTL responses were detected against dengue virus proteins in the PBMC of all four patients examined. This is the first report of dengue virus-specific CTLs after
natural secondary dengue virus infections.
We have previously shown that nonstructural proteins, in particular
NS3, are predominant targets for both CD4+ and
CD8+ CTLs in vaccine recipients (17, 19, 22). In
the present study, we also found that three of four donors had CTL
responses to NS3 and that the fourth donor had CTLs which recognized
the nonstructural proteins NS1.2a. Proteins with a cytoplasmic
intracellular localization have been noted to be the predominant source
of cytotoxic T-cell antigenic peptides (18). The NS3 protein
constitutes approximately 25% of the cytoplasmic region of the
polyprotein, which may explain why it is an immunodominant target for
CTL recognition. Numerous other factors (rate of proteolysis,
efficiency of transport, peptide stability, etc.) are also likely to
influence why peptides from nonstructural proteins are preferentially
presented on major histocompatibility complex molecules (1).
Since we have not tested vaccinia virus recombinants expressing NS5, it
is possible that there are also epitopes on NS5.
Immune responsiveness is affected by the major histocompatibility
complex, and the pathogenesis of some diseases has been associated with
specific HLA alleles. In areas where DHF is endemic, only a small
percentage of individuals exhibit severe disease, which suggests that
host genetic factors may play a role in susceptibility to severe
disease. One study found a positive association between HLA A2 and B
blank and the development of DSS and a negative relationship for HLA
B13 (4).
Since it is known that there is diversity in both HLA and non-HLA gene
loci between Southeast Asians and Caucasians (3), it was
important to analyze the recognition of dengue virus proteins by T
cells in the context of HLA molecules in Thai patients. We previously
isolated NS3-specific CD4+ and CD8+ CTL clones
from Caucasian volunteers which were restricted by the HLA alleles B35
(17), DR15 (12), and DPw2 (14). The NS1.2a-specific CTLs from patient KPP94-037 in the present study were
B57 restricted and DR7 restricted; the NS3-specific CTLs from patient
KPP94-024 were B7 restricted, and the NS3-specific CTLs from patient
CHD94-020 were A11.1 restricted. These results indicate that despite
differences in HLA alleles between Thais and Caucasians, peptides from
dengue virus nonstructural proteins are also predominantly recognized
by T cells from Thai children. These studies confirm our previous
results of the dominance of nonstructural proteins as CTL targets in
Caucasian dengue virus vaccine recipients. All of the T-cell lines
isolated from patient KPP94-024 recognized autologous targets pulsed
with aa 221 to 235 of the NS3 protein. The 15-mer which is lysed by all
the B7 restricted CD8+ CTLs from this patient contains a
proline at position 223. These results are entirely consistent with
reports of antigenic peptides bearing a proline at position 2 and
aromatic or hydrophobic residues at the C terminus, preferentially
binding to HLA B7 and related class I alleles sharing the B7-like
supertype (21).
Our earlier work analyzing primary responses from PBMC of vaccine
recipients, detected both serotype-specific and serotype-cross-reactive CTL responses against many proteins in individual donors (11, 19). We speculated that the serotype-cross-reactive memory T cells generated during the primary infection would be reactivated in a
secondary infection and contribute to the immunopathology of DHF which
is observed much more frequently in secondary infections. In this
study, we have examined CTL responses after secondary infection in four
Thai patients. All the NS1.2a-specific CTL lines generated from patient
KPP94-037 and the NS3-specific CTLs from patient KPP94-024 in this
study were cross-reactive with the other serotypes of dengue virus. The
bulk culture CTLs from patient CHD94-020 were also cross-reactive with
D2 and D3 virus NS3. We have not yet analyzed the primary CTL responses
in Thai children; therefore, we cannot conclusively define the
relationship between primary and secondary dengue virus infections.
However, these results suggest that the CTL responses in secondary
infections are predominantly due to reactivation of memory
cross-reactive CTL from the primary infections, consistent with our
hypothesis.
In conclusion, the CTL responses of Thai patients to natural secondary
dengue virus infection are directed against nonstructural proteins and
are mainly cross-reactive in nature.
 |
ACKNOWLEDGMENTS |
We thank Jurand Janus for preparation of viral antigens.
This work was supported by grants NIH P01-AI34533 and NIH R01-AI30624
from the National Institutes of Health.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Center for
Infectious Disease and Vaccine Research, University of Massachusetts
Medical Center, 55 Lake Ave. North, Worcester, MA 01655. Phone: (508) 856-4182. Fax: (508) 856-4890. E-mail:
Alan.Rothman{at}ummed.edu.
Present address: Department of Microbiology, Kinki University
School of Medicine, Osaka, Japan.
 |
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J Virol, May 1998, p. 3999-4004, Vol. 72, No. 5
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
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