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J Virol, April 1998, p. 2983-2990, Vol. 72, No. 4
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
A Leucine Zipper-Like Domain Is Essential for Dimerization and
Encapsidation of Bluetongue Virus Nucleocapsid Protein VP4
N.
Ramadevi,1
Javier
Rodriguez,1,
and
Polly
Roy1,2,*
Department of Biochemistry, University of Oxford, Oxford
OX1 3QU, and NERC Institute of Virology and Environmental Microbiology,
Oxford OX1 3SR, United Kingdom,1 and
Department of International Health, University of Alabama
at Birmingham, Birmingham, Alabama 352942
Received 13 August 1997/Accepted 6 January 1998
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ABSTRACT |
The bluetongue virus (BTV) minor protein VP4, with molecular mass
of 76 kDa, is one of the seven structural proteins and is located
within the inner capsid of the virion. The protein has a putative
leucine zipper near the carboxy terminus of the protein. In this study,
we have investigated the functional activity of this putative leucine
zipper by a number of approaches. The putative leucine zipper region
(amino acids [aa] 523 to 551) was expressed initially as a fusion
protein by using the pMAL vector of Escherichia coli, which
expresses a maltose binding monomeric protein. The expressed fusion
protein was purified by affinity chromatography, and its size was
determined by gel filtration chromatography. Proteins of two sizes, 51 and 110 kDa, were recovered, one equivalent to the monomeric form and
the other equivalent to the dimeric form of the fusion protein. To
prove that the VP4-derived sequence was responsible for dimerization of
this protein, a mutated fusion protein was created in which a VP4
leucine residue (at aa 537) within the zipper was replaced by a proline
residue. Analyses of the mutated protein demonstrated that the single
mutation indeed prevented dimerisation of the protein. The dimeric
nature of VP4 was further confirmed by using purified full-length
BTV-10 VP4 recovered from recombinant baculovirus-expressing BTV-10
VP4-infected insect cells. Using chemical cross-linking and gel
filtration chromatography, we documented that the native VP4 indeed
exists as a dimer in solution. Subsequently, Leu537 was replaced by
either a proline or an alanine residue and the full-length mutated VP4 was expressed in the baculovirus system. By sucrose density gradient centrifugation and gel filtration chromatography, these mutant forms of
VP4 were shown to lack the ability to form dimers. The biological
significance of the dimeric forms of VP4 was examined by using a
functional assay system, in which the encapsidation activity of VP4
into core-like particles (CLPs) was studied (H. LeBlois, T. French,
P. P. C. Mertens, J. N. Burroughs, and P. Roy, Virology
189:757-761, 1992). We demonstrated conclusively that dimerization of
VP4 was essential for encapsidation by CLPs.
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INTRODUCTION |
Leucine zipper and leucine
zipper-like domains in eukaryotic proteins have been demonstrated to
play essential roles in inter- and intramolecular interactions. The
leucine zipper motif was initially defined as a sequence of four or
five leucine residues spaced 7 amino acids (aa) apart. It was first
described for the DNA binding proteins c-Myc and c-Jun and the yeast
gene regulatory protein GCN4 (4, 12). The secondary
structure of a leucine zipper exhibits a coiled-coil conformation
(16). In the case of DNA binding proteins, these motifs are
responsible for protein dimerization and DNA binding activity (7,
18). The leucine zipper motif has also been identified in other
types of proteins, including the viral envelope glycoproteins of many
retroviruses (5, 17). For example, a leucine zipper-like
heptad repeat for the human immunodeficiency virus type 1 (HIV-1)
envelope glycoprotein gp41 is required for fusogenic processes and
virus entry into host cells (2).
Bluetongue virus (BTV) VP4 protein is a minor nucleocapsid protein
which, together with 2 other minor proteins (VP1 and VP6) and 10 double-stranded RNA (dsRNA) segments, form the inner virion core, which
is enclosed by three protein layers made up of four major structural
proteins. A subcore layer of VP3 molecules surrounds the inner core and
forms a scaffold for the next protein layer, which contains 780 molecules of VP7. Together, they form a complex icosahedral core
structure. The core is intimately in contact with an outer capsid
composed of two proteins, VP2 and VP5. The core, consisting of five
proteins (VP1, VP3, VP4, VP6, and VP7) is transcriptionally active, and
the three minor proteins (VP1, VP4, and VP6) are believed to be
responsible for transcription and replication of the BTV genome. The
VP4 protein (76 kDa), which is encoded by BTV RNA segment M4, has a
guanylyltransferase activity, an enzyme essential for the modification
of the 5' termini of the viral mRNAs, including the positive-sense
strand of the dsRNA genome (13, 15).
With a total of 654 aa, VP4 has a putative leucine zipper motif near
the carboxyl end of the molecule (8, 21). This domain, encompassing 29 residues from aa 523 to 551 (LRVESSVLRVRNPTLHETADELKAMG LDL), contains leucine residues (in bold) at every seventh position and between short stretches of charged and other amino acids,
indicating that it could form a leucine zipper, although the presence
of a proline in the middle of the arrangement may inhibit a regularly
coiled structure. However, whether the domain actually forms a
leucine zipper and/or whether it is required for the function of
the protein has not been investigated to date.
The present investigation was undertaken to determine the importance of
the putative leucine zipper region of VP4 in terms of its structural
and biological activities. We used a variety of methods,
including gel filtration chromatography, chemical cross-linking,
and sucrose density gradient centrifugation, to demonstrate that a
purified recombinant VP4 occurs in the form of a dimer in solution.
Second, we examined the ability of the putative leucine zipper in a
chimeric foreign protein to drive the monomeric form of the protein
into a dimeric form. Further, we used site-specific mutagenesis to
disrupt the zipper arrangement and to demonstrate its requirement for
dimerization. The data were confirmed by producing mutants with similar
mutations in VP4 and by examining the effects of such mutations on the
overall structure and oligomerization of the protein. The mutant and
wild-type VP4 molecules were compared to examine the functional
properties of the dimeric molecule. The data obtained demonstrate the
involvement of a leucine zipper in the dimerization and encapsidation
of VP4 in the BTV assembly process.
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MATERIALS AND METHODS |
Viruses and cells.
The wild-type baculovirus
Autographa californica nuclear polyhedrosis virus (AcNPV)
and the recombinant BAcPAK6 virus containing the lacZ
(
-galactosidase) gene under the control of the AcNPV polyhedrin
promoter were used (9). Spodoptera frugiperda
cells (Sf9) were used to grow BAcPAK6 and other recombinant
forms of AcNPV. The cells were cultured in TC-100 medium (GIBCO BRL,
Paisley, United Kingdom) supplemented with 5% fetal calf serum.
Construction of a bacterial fusion protein.
pMal-p2 (New
England Biolabs, Hitchin, Hertfordshire, United Kingdom) is an
Escherichia coli bacterial expression vector that can be
used to express and purify fusion proteins from cloned genes. A foreign
sequence is inserted downstream from the MalE (maltose binding protein
[MBP]) gene of E. coli. A recombinant plasmid to express a
fusion protein containing a specific VP4 sequence was constructed by
using PCR to amplify a portion of the cDNA of VP4 from plasmid
pAcYM1VP4 (13) with oligonucleotide primers VP4LZF and
VP4LZR (Table 1). The synthetic primers
provided an upstream BamHI site and a downstream
PstI site with a stop codon immediately preceding the
PstI site. The PCR was performed with Vent polymerase (NEB).
Following ligation into the BamHI and PstI sites
of the bacterial expression plasmid pMal-p2, the products were
transformed into E. coli XL-1 Blue.
A point mutation for the central leucine of the putative leucine zipper
was also created by PCR. Oligonucleotide primers VP4LZF
and VP4LZP
(Table
1) were used as forward and reverse primers,
respectively. The
reverse primer VP4LZP encodes a mutant sequence
to convert the central
leucine in the putative leucine zipper
motif (VP4 residue Leu537) to a
proline residue. The PCR product
was ligated into the
BamHI
and
PstI sites of the bacterial expression
vector pMal-p2
and transformed into
E. coli XL-1 Blue. The orientations
of
all the recombinant plasmids were verified by dideoxy sequencing
(
19).
Fusion protein expression and purification.
Bacterial
expression plasmids containing VP4 derivatives were transformed into
E. coli XL-1 Blue, which contains a
lacIq inducible repressor. The bacteria were
grown at 37°C in an orbital shaker to mid-logarithmic phase (optical
density at 600 nm of 0.5 to 0.6) in Luria-Bertani LB medium containing
0.02% glucose and 100 µg of ampicillin per ml. Protein expression
was induced by addition of IPTG
(isopropyl-
-D-thiogalactopyranoside) to a final
concentration of 3 mM followed by incubation for a further 2 h at
37°C. The cells were then pelleted and resuspended in column buffer
(100 mM Tris-HCl [pH 7.4], 1 mM EDTA, 200 mM NaCl, 1 mM sodium azide,
10 mM
-mercaptoethanol) and frozen at
20°C overnight. The cells
were thawed on ice, sonicated for 10 min with short pulses, and
centrifuged at 9,000 × g for 30 min. The fusion
proteins were purified by taking advantage of the affinity between MBP and amylose. To this end, the supernatant was passed through an amylose
resin (NEB) column previously equilibrated with column buffer. The
column was washed with 10 column volumes of column buffer to remove
unbound proteins. The fusion protein was subsequently eluted with
column buffer containing 10 mM maltose.
Construction of site-directed mutants and production of
recombinant baculoviruses.
Mutations to the central leucine of the
putative leucine zipper (VP4 residue Leu537) were also constructed in
the full-length VP4 gene. The baculovirus transfer vector pAcYM1VP4 was
digested with XbaI to remove an internal fragment between
nucleotides 1410 and 1770 and to generate plasmid pAcYM1VP4
Xba. To create VP4 containing proline in place of leucine
537 (L537P) oligonucleotide primers AvaII F(Pr) (forward
primer) and CD2VP4R (reverse primer) were used in a PCR (Table 1). The
product was digested with XbaI and AvaII to give
fragment 1 (Fig. 1). A second fragment
was created with oligonucleotide primers BINF and AvaII R as
the forward and reverse primers, respectively. This product was
digested with XbaI and AvaII to give fragment 2. Fragments 1 and 2 were ligated into pAcYM1VP4 Xba and
transformed in E. coli XL-1 Blue. To create mutant L537A (a
VP4 mutant with alanine in place of leucine 537), a similar strategy
was used, except that a fragment of DNA was produced with
AvaII F(Al) and CD2VP4R as the forward and reverse primers,
respectively (Table 1). This product was digested with XbaI
and AvaII to give fragment 3. Fragments 2 and 3 were ligated into pAcYM1VP4 Xba and transformed into E. coli
XL-1 Blue. All the DNA mutations and junction sites were confirmed by
dideoxynucleotide sequencing (19). The template used for all
these reactions was pAcYM1VP4. Recombinant baculoviruses expressing
wild-type and mutant VP4 were obtained by cotransfection of
Sf9 cells with Bsu36I-linearized AcNPV.PAC6 DNA
(10) in the presence of recombinant transfer vectors and a
Lipofectin reagent (GIBCO BRL). The viruses were plaque purified by
conventional techniques.

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FIG. 1.
Diagram of the cloning strategy used for creation of
site-directed mutations in full-length VP4. A through E represent
primers AvaII F(Pr), CD2VP4R, AvaII R, BINF, and
AvaII F(Al) respectively. See Table 1 for primer
sequences.
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Expression and purification of recombinant baculovirus wild-type
and mutant VP4.
Sf9 cells were infected with recombinant
baculoviruses at a multiplicity of infection of 5 and harvested 72 h postinfection by centrifugation at 3,500 × g for 10 min. The pellet was washed with phosphate-buffered saline and
resuspended in HNN lysis buffer (50 mM HEPES [pH 7.4], 100 mM NaCl,
0.5% Nonidet P-40) containing the protease inhibitors leupeptin, APMSF
(10 mM), E-64 (10 mM), pepstatin A (1 mM), and dithiothreitol (1 mM).
The cells were lysed with 10 strokes of a Dounce homogenizer and
centrifuged as above. Most of the expressed wild-type VP4 pelleted with
the nuclei and cellular debris. The protein was subsequently
solubilized from the pellet with 50 mM HEPES (pH 7.4) containing 1 M
NaCl. This high-salt buffer also released nucleic acids from the cell debris. To remove the nucleic acids, polyethylenimine (final
concentration, 0.1% [vol/vol]) was added to the high-salt extract
and the precipitated nucleic acids were removed by centrifugation. To
remove excess polyethyleneimine, the supernatant was passed through an
S-Sepharose column, and the protein was eluted by washing the column
with 50 mM HEPES (pH 7.4) containing 1 M NaCl. The eluted protein was equilibrated in 50 mM HEPES-100 mM NaCl (pH 7.4) (HN buffer) by being
passed through a PD10 Sephadex G-25 column (Pharmacia). For further
purification, the sample was bound to a poly(U) column and VP4 was
eluted with 50 mM HEPES-500 mM NaCl.
In contrast to the wild-type VP4 and as estimated by gel
electrophoresis, some 90% of the mutant VP4L537A and VP4L537P proteins
were soluble in HNN lysis buffer and were recovered in the supernatant.
These mutant proteins were further purified by precipitating the
solution first with 30% ammonium sulfate and then with 90% ammonium
sulfate. The latter pellets were then dissolved in HN buffer.
The final
preparations were passed through a PD10 Sephadex G-25
column to
equilibrate the protein in 50 mM HEPES-100 mM NaCl (pH
7.4).
Chemical cross-linking.
Purified VP4 (200 ng) core-like
particles (CLPs) encapsidating VP4 in HN buffer were incubated with
freshly prepared glutaraldehyde solution (final concentrations, 0.0001 to 0.01% [vol/vol] in H2O) in a 20-µl reaction mixture
at 25°C for 30 min. The reaction was then stopped by addition of 2 µl of 1 M Tris-HCl (pH 8.0) followed by incubation on ice for 5 min,
and the cross-linked products were analyzed by sodium dodecyl
sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). The identity of
the VP4 species was confirmed by Western blotting with a VP4-specific
guinea pig antiserum, and the identity of VP3, VP7, and VP4 proteins
was confirmed by Western blotting with a BTV-specific rabbit antiserum
as described below.
Gel filtration chromatography.
Gel filtration chromatography
was performed with Zorbax GF250 (Dupont, Wilmington, Del.) and Superose
12 (Pharmacia) columns. Protein samples at 1 mg/ml were passed through
the column and eluted with 50 mM Tris-200 mM NaCl or 50 mM HEPES-100
mM NaCl at a flow rate of 0.7 or 0.1 ml/min, respectively. The protein content of each eluted fraction was measured spectrophotometrically at
a wavelength of 214 nm, and the presence of VP4 was verified by
SDS-PAGE and Western blotting as described below. The columns were
calibrated with known molecular weight standards (Sigma), and a graph
was drawn by plotting the partition coefficient
Kav on the x axis and log molecular
weight on the y axis. Kav was calculated from the formula Kav = (Ve
V0)/(Vt
V0), where Ve is the
eluted volume, V0 is the void volume, and
Vt is the total volume. From this calibration
graph, the molecular weights of the eluted proteins were calculated. An
oligomer-to-monomer ratio was then calculated by measuring the regions
under both the oligomer and monomer A214 peaks, and the percent
oligomerization was determined from this ratio.
SDS-PAGE and Western blot analysis.
Protein samples were
analyzed by SDS-PAGE with either a 10 or 8% polyacrylamide resolving
gel (11). The gels were either stained with Coomassie
brilliant blue or electroblotted onto polyvinylidene difluoride (PVDF)
membranes (Immobilon P; Millipore) for immunodetection. The membranes
were blocked with 5% fat-free milk powder in phosphate-buffered saline
for 1 h and probed with a polyclonal guinea pig anti-VP4 antiserum
(dilution of 1:1,000), an anti-MBP monoclonal anti-serum (NEB), or a
polyclonal rabbit anti-BTV antiserum for 60 min at room temperature.
The membranes were washed and treated with a 1:40,000 dilution of
alkaline phosphatase-conjugated goat anti-guinea pig immunoglobulin G
or anti-rabbit immunoglobulin G antiserum or a 1:1,000 dilution of
peroxidase-conjugated anti-rabbit immunoglobulin G antiserum (Sigma,
Poole, United Kingdom). When alkaline phosphatase conjugate was
used, the membranes were developed with nitroblue tetrazolium
chloride and 5-bromo-4-chloro-3-indolyl phosphate (GIBCO),
whereas luminescence substrate solution A and starting solution B
(Boehringer Mannheim) were used as specified by the manufacturer when
peroxidase-conjugated anti-rabbit immunoglobulin G antiserum was used.
Sucrose density gradient centrifugation.
Sucrose gradients
were used to examine the oligomeric forms of the proteins. Samples (1 ml) containing approximately 1 mg of purified or partially purified VP4
and mutant VP4 proteins were layered onto linear gradients of 25 to
10% (wt/vol) sucrose dissolved in HN buffer and centrifuged at
30,000 × g at 4°C for 18 h in an SW41
centrifuge. Fractions of 0.5 ml were collected from the top of the
gradients and numbered with fraction 1 at the top and fraction 24 at
the bottom. To monitor the sizes of the protein samples, the molecular
mass protein markers
-amylase (200 kDa), alcohol dehydrogenase (150 kDa), bovine serum albumin (68 kDa), and chicken ovalbumin (41 kDa)
were similarly fractionated. A 20-µl sample of each fraction was
mixed with 10 µl of SDS-PAGE sample buffer, heated to 90°C for 2 min, and analyzed by SDS-PAGE. The gels were electroblotted onto PVDF
membranes, and proteins were detected by probing with guinea pig
anti-VP4 antiserum as described above.
 |
RESULTS |
The putative leucine zipper motif of VP4 forms an oligomer
when introduced into a carrier protein.
To investigate the
ability of the putative leucine zipper region of VP4 to
oligomerize a monomeric protein and to facilitate the
purification of VP4 derivatives, we used a bacterial expression vector, pMal-p2, which encodes MBP, a monomeric protein that
has an affinity to amylose resins. The BTV VP4 gene fragment
(encoding aa 523 to 551 and encompassing the putative leucine
zipper region) was expressed as a fusion protein with MBP and purified
to homogeneity as described in Materials and Methods. The
synthesis of the fusion protein MBP/VP4LZ was examined by
SDS-PAGE (Fig. 2). The fusion protein
MBP/VP4LZ had a molecular mass of 51 kDa, equivalent to its
predicted size (Fig. 2, lane 2) and larger than the carrier 41-kDa MBP
(lane 1).

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FIG. 2.
SDS-PAGE of MBP-VP4 fusion proteins. The samples of MBP
fusion protein containing either wild-type or mutant forms of the
leucine zipper region of VP4 were analyzed by SDS-PAGE (10%
polyacrylamide). Lanes: 1, purified MBP; 2, purified fusion protein
derived from plasmid MBP/VP4LZ expressing the wild-type leucine zipper
region; 3 and 4, standard molecular mass markers; 5, purified fusion
protein derived from plasmid MBP/VP4LZP expressing the mutant (L537P)
leucine zipper region.
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The oligomeric nature of the fusion protein was examined by gel
filtration chromatography. As shown in Fig.
3A, the control
MBP eluted as a single
sharp peak at an elution time of 14 min,
corresponding, as expected, to
a single monomer of 41 kDa. By
contrast, the fusion protein MBP/VP4LZ
eluted as two sharp peaks,
one at an elution time of 9.5 min and
the second at an elution
time of 14 min (Fig.
3B),
indicating that two forms of the MBP/VP4LZ
protein were present. The
low-molecular-mass peak eluted close
to that expected for a 51-kDa
monomeric form of the fusion protein.
The earlier-eluting
high-molecular-mass peak corresponded to a
protein with a molecular
mass of 110 kDa, as expected for the
dimeric form of
MBP/VP4LZ. An aliquot of each peak was examined
by Western blot
analysis with a monoclonal anti-MBP antibody to
confirm the presence of
the monomeric and dimeric species. The
presence of dimers in the
chimeric but not the parent MBP suggests
that the leucine zipper region
of VP4 was responsible for the
observed dimerization.

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FIG. 3.
Gel filtration analysis of MBP fusion proteins. Aliquots
of purified MBP, MBP/VP4LZ, and MBP/VP4LZP were loaded onto a GF250
column. Samples were eluted at a flow rate of 0.5 ml/min with 50 mM
Tris-200 mM NaCl as the eluent, and the UV absorption at 214 nm was
measured. (A) MBP eluted as a single peak; (B) MBP/VP4LZ eluted as two
peaks of approximately the same size; (C) MBP/VP4LZP (L537P) eluted
mainly as a single peak.
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A single mutation in the center of the putative leucine zipper
motif prevents oligomerization of the fusion protein.
To confirm
that the putative leucine zipper motif was responsible for
oligomerization of the fusion protein, a mutant form of the fusion
protein, in which the central leucine residue of the heptad leucine
residue was replaced with a proline residue (L537P), was generated. The
mutant protein (MBP/VP4LZP) was expressed and purified as described
above. Analysis by gel filtration chromatography showed that the
profiles of the eluted protein peaks differed significantly from
that of the parent fusion protein. The dimeric form was significantly
reduced (Fig. 3C). When calculated, the ratio of monomer to dimer was
1:0.006; i.e., only 0.6% of the total protein was in the form of a
dimer. By contrast, the MBP/VP4L2 protein exhibited a ratio of 1:1.
These data demonstrate that a single mutation in a key leucine residue
perturbed the oligomerization function of the domain, although it did
not abrogate it completely.
VP4 exists as a dimer.
Although the fragment encompassing the
putative leucine zipper motif exhibited an ability to oligomerize a
foreign protein, the issue of whether it also is involved in
oligomerization of VP4 remained to be determined. For this purpose, a
baculovirus vector that expresses a functional form of VP4 was used for
comparative analyses with baculovirus-expressed mutant forms of VP4
(13). The level of VP4 in insect cell cultures is very high,
albeit present predominantly as an insoluble form (13).
Since the use of purified VP4 was essential to investigate the dimeric
nature of the protein, a procedure was developed to obtain a soluble and homogeneous form of VP4. Solubilization of VP4 was initially achieved by the addition of a high salt concentration (to 1 M NaCl). We
also took advantage of the nonspecific RNA binding property of VP4 to
obtain a final purification, by binding the protein onto a poly(U)
column and separating it from residual cellular proteins. The purity of
the 76-kDa protein was analyzed by SDS-PAGE and Western blotting (Fig.
4).

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FIG. 4.
Expression and purification of full-length VP4 examined
by SDS-PAGE (10% polyacrylamide). Lanes: 1, molecular mass markers; 2, uninfected Sf9 cell lysate; 3, Sf9 cells infected
with PAK6 expressing -galactosidase; 4, Sf9 cells
infected with recombinant baculovirus expressing VP4; 5, supernatant of
Sf9 cells infected with recombinant baculovirus expressing
VP4 following lysis with HNN buffer; 6, solubilization of VP4 in 1 M
NaCl; 7, purified VP4 after passage through the PD10 column and the
poly(U) column.
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To determine whether recombinant VP4 exists as monomers or as dimers,
we first analyzed the purified VP4 by gel filtration
chromatography in
the presence of a low salt concentration, as
described in Materials and
Methods. The presence of VP4 in each
fraction was initially monitored
by SDS-PAGE followed by Western
blot analysis (data not shown). VP4 was
eluted as two sharp peaks,
one between fractions 120 and 125 and the
second between fractions
138 and 142. The molecular masses of the
protein samples in each
peak were determined in relation to the known
molecular mass markers
as described in Materials and Methods. As shown
in Fig.
5, the
molecular mass of the
protein in one peak was 158 kDa, equivalent
to a dimeric form of VP4,
and that of the second, 80 kDa, was
equivalent to monomeric VP4. When
calculated, the ratio of monomer
to dimer was 1:1 (data not shown).
These results clearly demonstrate
that under these conditions VP4
exists as monomers and dimers.

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FIG. 5.
Molecular mass determination of the purified full-length
VP4 by gel filtration chromatography. A molecular mass calibration
curve was obtained from the elution profiles of the protein molecular
weight (m.w.) standards shown in the bottom panel. Apparent molecular
masses of different forms of VP4 (monomer and dimer as indicated) were
determined by comparing their average
Ve/V0 ratios (obtained from three
independent determinations) with the calibration curve shown in the
upper panel.
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To analyze VP4 further, we used glutaraldehyde to cross-link the dimer
and to produce a stable form of such dimers. Initially,
and to examine
the effects of glutaraldehyde on VP4, the protein
was treated with
various concentrations of glutaraldehyde (final
concentration, 0.0001 to 0.1% [vol/vol]) and the protein complexes
were analyzed by
SDS-PAGE gel (data not shown). Following glutaraldehyde
treatment, a
significant portion of the VP4 protein migrated as
a dimer (20 to 25%
[data not shown]), although larger aggregates
of protein were also
observed at the top of the gel. The molecular
masses of the monomers
and dimers were estimated more accurately
by generating a graph, drawn
by plotting
Rf values on the
x axis
and log molecular masses on the
y axis (Fig.
6A). The VP4 dimers
had molecular masses
of 162 kDa, whereas the VP4 monomers had
apparent molecular masses of
79 kDa. Since the calculated molecular
mass of VP4 is 75 kDa, the
latter value is within the range of
the expected size (±10%) (Fig.
6A). The identities of the bands
were confirmed by Western blotting
with an anti-VP4 polyclonal
guinea pig antiserum (Fig.
6B). The data
clearly showed that VP4
forms dimers, since the protein bands
corresponding to both dimeric
and monomeric forms of VP4 were detected
in the presence of 0.001
and 0.01% glutaraldehyde (Fig.
6B, lanes 3 and 4). At a higher
concentration of glutaraldehyde (0.1%) (lane 5),
the amount of
monomeric protein decreased and a smear was observed in
the position
of the dimers and higher up the gel. When treated with a
low concentration
of glutaraldehyde (0.0001%), the VP4 monomer
remained unaffected.
In addition to dimeric and monomeric bands, a
second high-molecular-mass
band was identified (lane 3) in PAGE. This
is probably due to
either partially cross-linked polymers of VP4 or
multimeric forms
of a lower-molecular-mass degradation product of VP4.

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FIG. 6.
Determinations of the molecular mass oligomeric status
of baculovirus-expressed VP4 after glutaraldehyde cross-linking. (A)
After SDS-PAGE (10% polyacrylamide), log molecular masses of protein
standards (y axis) ( ) were plotted against
Rf values (distance moved by the
protein/distance moved by the dye front) (x axis) as
described in Materials and Methods. Size estimates of VP4 monomers and
dimers ( ) were extrapolated from the graph. (B) Purified VP4 was
cross-linked with glutaraldehyde, subjected to SDS-PAGE (10%
polyacrylamide), and transferred to a PVDF membrane for Western blot
analyses. The blot was reacted with a polyclonal anti-VP4 guinea pig
antiserum. Lanes: 1, VP4 without glutaraldehyde; 2 to 5, VP4
cross-linked with 0.0001, 0.001, 0.01, or 0.1% glutaraldehyde,
respectively. (C) Purified CLPs encapsidating VP4 were cross-linked
with glutaraldehyde, subjected to SDS-PAGE (8% polyacrylamide), and
transferred to a PVDF membrane for Western analyses. The blot was
reacted with a polyclonal anti-BTV rabbit antiserum. Lanes: 1, CLPs
encapsidating VP4, cross-linked with 0.001% (final concentration)
glutaraldehyde; 2, CLPs encapsidating VP4 without glutaraldehyde.
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To evaluate the biological relevance of the dimeric form of VP4, it was
necessary to investigate the oligomeric nature of
VP4 within the
BTV-derived particle. To facilitate the identification
of the VP4 dimer
within the virion and to avoid formation of oligomers
of VP4 with VP1
and/or VP6 upon chemical cross-linking, we used
CLPs containing only
VP4 but not the other two minor proteins,
VP1 and VP6. The CLPs were
treated with glutaraldehyde in a similar
way to that described above.
After cross-linking the CLPs encapsidating
VP4 with glutaraldehyde
(0.001%, final concentration), the products
were analyzed by SDS-PAGE
(8% polyacrylamide) followed by Western
blotting with anti-BTV
polyclonal rabbit antiserum. Figure
6C
(lane 1) shows the cross-linked
product of CLPs encapsidating
VP4, in which both VP4 monomers and
dimeric bands were visualized
clearly. As expected, both VP3 and VP7
monomeric bands were also
present. In addition, a large band migrating
slightly slower (~200
kDa) than that of VP4 dimer was recognized by
BTV antibody. This
200-kDa band was most probably VP3 dimer, since the
VP3 monomeric
size is 103 kDa. Alternatively, it could be a heterodimer
of VP3
and VP4. However, this band was not detected by VP4-specific
antisera,
and so it is highly unlikely that it is a heterodimer of VP3
and
VP4. Some aggregates of the proteins which could not enter the
gel
were also detected above this band. Lane 2 shows non-cross-linked
product, where only monomeric bands of VP3, VP7, and VP4 were
seen. The
identity of the VP4 bands was reconfirmed by using anti-VP4
polyclonal
guinea pig antiserum (data not shown). The results
clearly demonstrate
that VP4 indeed exists as a dimer in CLPs
and forms homodimers but does
not oligomerize with VP3 and VP7.
Leucine at aa 537 drives the dimerization of VP4.
To confirm
the data obtained from the chimeras analyzed above and to determine the
importance of the central leucine residue in the putative leucine
zipper, two different substitution mutations were created. The first
involved proline in lieu of leucine 537, and the second involved
alanine in lieu of leucine 537. As described in Materials and Methods,
both mutant forms of VP4, VP4L537A and VP4L537P, were generated with
recombinant baculovirus expression systems. As expected, SDS-PAGE and
Western blot analyses confirmed the presence and size of the mutant VP4
proteins (Fig. 7).

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FIG. 7.
SDS-PAGE (10% polyacrylamide) of recombinant
baculovirus-expressed full-length mutant VP4 proteins. (A) Lanes: 1, molecular mass markers; 2, Sf9 cells infected with
recombinant baculovirus expressing VP4L537A; 3, supernatant Sf9 cells infected with recombinant
baculovirus expressing VP4L537A following lysis with HNN buffer; 4, pellet of Sf9 cells infected with recombinant baculovirus
expressing VP4L537A following lysis with HNN buffer (see Materials and
Methods). (B) Lanes: 1, molecular mass markers; 2, pellet of
Sf9 cells infected with recombinant baculovirus expressing
VP4L537P following lysis with HNN buffer (see Materials and Methods);
3, supernatant Sf9 cells infected with recombinant
baculovirus expressing VP4L537P following lysis with HNN buffer.
|
|
As with wild-type recombinant protein, the expression levels of both
mutants were very high. However, surprisingly, and unlike
wild-type
VP4, both mutant proteins were soluble in low-salt buffer
(see
Materials and Methods). Figure
7A (lane 3) and Fig.
7B (lane
3) show
samples of the supernatants after solubilization with
HNN buffer (50 mM
HEPES, 100 mM NaCl, 0.5% Nonidet P-40 [pH 7.4])
and centrifugation
at 3,000 ×
g. Very little mutant protein was
present
in the pellet (Fig.
7A, lane 4). Despite the solubility
and high
expression levels, these proteins could not be purified
by the usual
column chromatography procedures (such as ion-exchange,
hydrophobic, or
blue Sepharose columns). The mutant proteins also
failed to
attach to the poly(U) column (data not shown), indicating
that they had
lost their RNA binding ability. As a consequence,
only partially
purified mutant VP4 proteins were used for further
studies.
To monitor the oligomeric forms of the mutant proteins, we used an
alternative sucrose density gradient centrifugation assay
system in
which the different sizes of VP4, such as monomer, dimer,
and other
multimers, could be separated. The gradients were fractionated,
the
presence of VP4 was monitored by Western blot analysis, and
the
molecular masses were determined as described in Materials
and Methods.
As shown in Fig.
8A, in the gradients the
monomeric
forms of VP4 were identified between fractions 6 and 10 (i.e.,
toward the top of the gradients), equivalent to the fractions
that contain 68-kDa bovine serum albumin. The dimeric forms, on
the
other hand, and as expected, migrated in the middle of the
gradient
(fractions 10 to 15), similar to a 150-kDa protein, alcohol
dehydrogenase. These results correspond to the data obtained from
gel filtration chromatography and chemical cross-linking. The
data
obtained with two mutant forms were different. For the VP4L537A
mutant
protein, both monomeric (lanes 1 to 10) and dimeric (lanes
10 to
12) forms of the protein were present (Fig.
8B). However,
there was
less dimeric mutant protein than that obtained for the
wild-type VP4.
In contrast, the VP4L537P mutant was recovered
only as a monomeric form
(Fig.
8C) and not as a dimeric form,
indicating that the
substitution prevented dimerization of the
protein. By way
of comparison, the MBP/VP4LZ fusion protein was
analyzed
similarly. As expected, similar monomeric and dimeric
forms of
the fusion proteins were identified for MBP/VP4LZ. For
the mutant
fusion protein MBP/VP4LZP, only the monomeric form
was identified (data
not shown). These results not only confirmed
the ability of the leucine
zipper region to drive a monomeric
protein into a dimeric form but also
demonstrated that certain
mutations (such as proline substitution) in
the central leucine
of the putative leucine zipper region of BTV-10 VP4
can abolish
dimerization of the protein.

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FIG. 8.
Western analysis of baculovirus-expressed wild-type and
mutant forms of VP4 after fractionation by sucrose gradient
centrifugation. Lanes 1 to 24 represent fractions collected from the
sucrose gradient; fraction 1 represents the top of the gradient, and
fraction 24 represents the bottom. After SDS-PAGE (10%
polyacrylamide), all the fractions were subjected to Western analysis
with anti-VP4 antisera. The positions of the standard marker proteins
bovine serum albumin (BSA) (68 kDa), alcohol dehydrogenase (150 kDa),
and -amylase (200 kDa) are indicated at the top. (A)
Baculovirus-expressed wild-type VP4; (B) VP4L537A, showing monomer and
dimers (predominantly monomer, and a small portion as dimer); (C)
VP4L537P mutant, showing only monomeric forms.
|
|
The dimeric form of VP4 is essential for encapsidation of the
molecules within CLPs.
To investigate the biological significance
of the leucine zipper motif and the dimeric forms of VP4, we examined
the encapsidation activity of native and mutant forms of VP4 molecule
by using an assay system in which proficient assembly of CLPs can be
achieved (6).
CLPs were prepared in the presence of wild-type or mutated forms of
VP4, and the presence of VP4 in each preparation was analyzed
by
SDS-PAGE and Western blotting with an anti-VP4 antiserum. As
shown in
Fig.
9, recombinant wild-type VP4 was
encapsidated efficiently
within CLPs consisting of VP3 and VP7 (see
lane 3). Surprisingly,
not only the proline substitution mutant,
VP4L537P (lane 2) but
also the alanine substitution mutant VP4L537A
(lane 1) failed
to be encapsidated by CLPs, even though VP4L537A
produced some
dimeric forms of VP4 in isolation.

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|
FIG. 9.
Encapsidation of the wild-type and mutant VP4 molecules
by CLPs. Sf9 cells were coinfected with a dual recombinant
baculovirus expressing recombinant proteins VP3 and VP7 and either with
a recombinant virus expressing wild-type VP4 or with one of the
recombinant viruses expressing mutant VP4. (A) Coomassie blue-stained
gel. (B) Western blot with guinea pig anti-VP4 antiserum. Lanes: 1, gradient-purified CLPs obtained from coinfection of Sf9
cells with a dual-recombinant baculovirus expressing VP3 and VP7 and a
recombinant baculovirus expressing VP4L537A; 2, gradient-purified CLPs
obtained from coinfection of Sf9 cells with a
dual-recombinant baculovirus expressing VP3 and VP7 and a recombinant
baculovirus expressing VP4L537P; 3, gradient-purified CLPs obtained
from coinfection of Sf9 cells with a dual-recombinant
baculovirus expressing VP3 and VP7 and a recombinant virus expressing
wild-type VP4.
|
|
 |
DISCUSSION |
Our initial investigation involving the putative leucine zipper
region of VP4 was carried out by generating a bacterial fusion protein
expressing the heptad repeat of leucine residues within the leucine
zipper region of VP4, together with a bacterial MBP. The rationale
behind this was to examine whether the monomeric form of MBP could be
converted into a dimeric form by these VP4 sequences. The data clearly
demonstrated that this region of VP4 can drive the dimerization of at
least this monomeric protein. It is noteworthy in this context that
when the hydrophobic heptad repeat of the HIV-1 transmembrane protein
was similarly fused with monomeric proteins, such as MBP or protein A,
the fusion proteins also formed dimers (2, 20). We have
obtained direct proof of the involvement of a central leucine residue
in the chimeric protein dimerization from analyses of a proline
substitution mutant. Similar results have been reported for proline and
aspartic acid substitution of the central isoleucine of the heptad
repeat of HIV-1 gp41 (2).
Purified VP4, when passed through a gel filtration column, eluted as
two major peaks, confirming the existence of both monomeric and dimeric
forms of the protein. When we exposed purified VP4 to glutaraldehyde
cross-linking, two sizes of VP4 molecules were identified in PAGE, one
with an apparent molecular mass of 79 kDa and one with a mass of 162 kDa, i.e., equivalent to the monomeric and dimeric forms of VP4,
respectively. Dimer formation by cross-linking occurred at 0.001 and
0.1% (vol/vol) glutaraldehyde. At 0.0001% glutaraldehyde, dimers were
not stabilized. At high concentrations (e.g., 0.1%) most of the
protein was present in the position of the dimeric forms but as a smear
on SDS-PAGE. In addition, on SDS-PAGE, a second high-molecular-mass
band was identified. Since this band reacted with VP4 polyclonal
antiserum, it is likely that it consists of either cross-linked
aggregates of VP4 or multimeric forms of a lower-molecular-mass
degradation product of VP4. The existence of both monomeric and dimeric
forms of VP4 under native conditions was confirmed by sucrose density
gradient centrifugation of purified VP4.
The predicted leucine zipper motif in BTV VP4 has an unusual structure
with a proline residue in the middle of the structure. Prolines often
lead to an unacceptable disruption of helix hydrogen bonding, for
example by dictating a kink in the structure and disturbing the packing
of the helix side chains (3, 14). Generally, it is
considered that proline residues act as
-helix breakers.
Nevertheless, despite the presence of a proline residue, our data
indicate that this region of VP4 functions as a driving force for
dimeric forms of VP4.
Barlow and Thornton (1) have reported a survey of 291 helices in 57 proteins. Ten of these helices contained an internal proline, and Barlow and Thornton showed that conserved prolines in the
-helices played a definite structural and functional role in such
proteins and suggested that the kink created by proline residues in
each helix provides a necessary, rather than undesirable, distortion
for such sequences.
The functional and structural importance of the leucine zipper of VP4
was confirmed by creating two substitution mutants with recombinant
baculovirus expression systems. Our data demonstrate that replacement
of leucine by alanine reduced the dimeric form of the protein but did
not abolish it completely. In contrast, the replacement by proline
essentially abolished dimer formation. Interestingly, both mutant
proteins were highly soluble in low-salt buffer, unlike native VP4. The
reason why these properties of the protein were altered is not known.
In the virion, VP4 resides within the inner core together with 2 other
minor proteins VP1 and VP6 and 10 dsRNA segments. VP4 can be
incorporated in the CLPs by coexpression of VP4 and the major core
proteins VP3 and VP7, using recombinant baculovirus expression systems.
By using this functional assay system, we have demonstrated that the
mutant VP4 proteins that have lost the capability to form the VP4 dimer
were not incorporated into CLPs, indicating that VP4 has to be in
dimeric form to be encapsidated into the BTV core.
In summary, a putative leucine zipper has been shown to be a functional
domain that drives the dimerization of VP4, and it has been
demonstrated that the dimeric VP4 is essential for correct assembly
into BTV cores.
 |
ACKNOWLEDGMENTS |
We thank Stephanie Price for typing the manuscript, Chris Hatton
for doing photography, and Adele Peak for helping with in cell culture.
This work was partially funded by BBSRC Link grant AO2643 and NIH grant
A126879.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Institute
of Virology and Environmental Microbiology, Mansfield Rd., Oxford OX1
3SR, United Kingdom. Phone: 1865 281630. Fax: 1865 281696. E-mail: por{at}mail.nerc-oxford.ac.uk.
Present address: Centro de Biologic Molecular "Servero Ochoa"
de Madrid, 28049 Madrid, Spain.
 |
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J Virol, April 1998, p. 2983-2990, Vol. 72, No. 4
0022-538X/98/$04.00+0
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