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J Virol, February 1998, p. 1365-1376, Vol. 72, No. 2
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
An ATF/CRE Element Mediates both EBNA2-Dependent
and EBNA2-Independent Activation of the Epstein-Barr Virus LMP1
Gene Promoter
Anna
Sjöblom,*
Weiwen
Yang,
Lars
Palmqvist,
Ann
Jansson, and
Lars
Rymo
Department of Clinical Chemistry and
Transfusion Medicine, Göteborg University, Sahlgrenska
University Hospital, S-413 45 Gothenburg, Sweden
Received 14 July 1997/Accepted 29 October 1997
 |
ABSTRACT |
The Epstein-Barr virus (EBV) latent membrane protein 1 (LMP1) is a
viral oncogene whose expression is regulated by both viral and cellular
factors. EBV nuclear antigen 2 (EBNA2) is a potent transactivator of
LMP1 expression in human B cells, and several EBNA2 response elements
have been identified in the promoter regulatory sequence (LRS). We have
previously shown that an activating transcription factor/cyclic AMP
response element (ATF/CRE) site in LRS is involved in EBNA2
responsiveness. We now establish the importance of the ATF/CRE element
by mutational analysis and show that both EBNA2-dependent activation
and EBNA2-independent activation of the promoter occur via this site
but are mediated by separate sets of factors. An electrophoretic
mobility shift assay (EMSA) with specific antibodies showed that the
ATF-1, CREB-1, ATF-2 and c-Jun factors bind to the site as ATF-1/CREB-1
and ATF-2/c-Jun heterodimers whereas the Sp1 and Sp3 factors bind to an
adjacent Sp site. Overexpression of ATF-1 and CREB-1 in the cells by
expression vectors demonstrated that homodimeric as well as
heterodimeric forms of the factors transactivate the LMP1 promoter in
an EBNA2-independent manner. The homodimers of ATF-2 and c-Jun did not
significantly stimulate promoter activity. In contrast, the ATF-2/c-Jun
heterodimer had only a minor stimulatory effect in the absence of EBNA2
but induced a strong transactivation of the LMP1 promoter when
coexpressed with this protein. Evidence for a direct interaction
between the ATF-2/c-Jun heterodimeric complex and EBNA2 was obtained by
EMSA and coimmunoprecipitation experiments. Thus, our results suggest that EBNA2-induced transactivation via the ATF/CRE site occurs through
a direct contact between EBNA2 and an ATF-2/c-Jun heterodimer. EBNA2-independent promoter activation via this site, on the other hand,
is mediated by a heterodimeric complex between the ATF-1 and CREB-1
factors.
 |
INTRODUCTION |
Epstein-Barr virus (EBV) is a
ubiquitous human herpesvirus, consistently detected in several human
malignancies, including endemic Burkitt's lymphoma (BL),
nasopharyngeal carcinoma (NPC), and posttransplantation lymphoma
(50). In vitro infection of B lymphocytes by EBV, as well as
explant culture of lymphocytes from seropositive adults, gives rise to
immortalized cell lines with the limited gene expression of six nuclear
proteins (EBNA1 to EBNA6) and three membrane proteins (LMP1, LMP2A, and
LMP2B), as well as two small nuclear RNAs (EBER1 and EBER2)
(36). Mutagenesis of the viral genome has defined a subset
of six genes required for (EBNA1 to EBNA3, EBNA6, and LMP1) or
contributing to (EBNA5) B-cell immortalization (12, 30, 35, 45,
58, 70).
The EBNA2 protein transactivates the LMP1 gene but also transactivates
other viral and cellular genes (1, 13, 19, 24, 38, 57, 63-67,
71). However, since EBNA2 seems to lack sequence-specific DNA-binding ability, the participation of cellular proteins is necessary for the recognition of specific promoters. Some of these proteins have been identified, including C promoter binding factor 1 (CBF1), also designated J
recombination signal-binding protein (RBP-J
) (26, 31, 43, 62, 72), the Ets-related PU.1 factor
(33), and a POU domain protein (55). It has been
suggested that EBNA2, when bound by cellular proteins, associates with
specific regulatory sites in viral or cellular genomes and activates
transcription by recruiting basal transcription factors to nearby
promoters. This is corroborated by the recent demonstration of a direct
interaction between EBNA2 and components of the RNA polymerase II
transcription initiation complex (59-61, 68).
Several lines of evidence indicate that the transforming effect of LMP1
is explained to a large extent by its functional similarity to an
activated form of tumor necrosis factor family receptor (TNFR). This
notion is based on the facts that LMP1 has an intrinsic ability to
aggregate in the plasma membrane and to associate with TNFR-associated
factors (17, 42, 44, 48). The expression of the LMP1 gene in
B cells is primarily due to activation of a promoter designated EDL1 in
the EBV genome (22, 23). In the present study, we have
focused on the promoter-proximal part of the LMP1 regulatory sequence
(LRS) which contains a potential Sp site at position
33 and an
activating transcription factor/cyclic AMP (cAMP) response element
(ATF/CRE) site at position
41 relative to the transcription
initiation site (see Fig. 1). The Sp factor-binding element is one of
the most widely distributed promoter elements in cellular and viral
genes. To date, four different Sp proteins, designated Sp1, Sp2, Sp3,
and Sp4, have been identified. The members of this transcription factor
family have structural features in common, including zinc fingers and
glutamine- and serine/threonine-rich amino acid stretches (27,
37). A previous study showed that the ATF/CRE motif in LRS is
likely to play a role as a mediator of the EBNA2 effect and promoter
activation by cAMP analogs (21). The ATF/CRE sequence motif
belongs to one of the major classes of regulatory elements that
participates in transcriptional regulation induced by extracellular
signals. Several proteins, including ATF-1, ATF-2, ATF-3, ATF-a,
CREB-1, CREB-2, and the CREM proteins, bind as homo- or heterodimers to
this sequence (15). This family of regulatory factors has
been implicated in cAMP-, calcium-, and virus-induced modulation of
transcription (15, 25, 54). The AP-1 binding site (TRE),
which confers responsiveness to tetradecanoyl phorbol acetate
(2) differs by only 1 nucleotide from the ATF/CRE site. This
element is recognized by a group of proteins, including those encoded
by the c-fos and c-jun gene families, that form homo- and heterodimers with each other (29). The members of the AP-1 and ATF/CREB factor families bind preferentially to their respective sequence, but due to selective formation of interfamily heterodimers, new binding specificities arise. For example, c-Jun binds
to an ATF/CRE site with considerably higher affinity as a heterodimer
with ATF-2 than as a c-Jun homodimer (29).
The objective of the present study was to define the role of the Sp and
ATF/CRE sites in EBNA2 responsiveness of the LMP1 promoter and to
characterize the factors involved. Mutational analysis showed that both
elements were required for an efficient response of the promoter.
Electrophoretic mobility shift assay (EMSA) and antibody supershift
analysis demonstrated that Sp1 and Sp3 bound to the Sp site and that
two distinct heterodimeric complexes, ATF-1/CREB-1 and c-Jun/ATF-2,
interacted with the ATF/CRE site. The results indicate that the EBNA2
transactivation of the promoter is dependent on interaction with the
c-Jun/ATF-2 heterodimer whereas the previously shown stimulatory effect
of cAMP on LMP1 expression probably is mediated by the ATF-1/CREB-1
heterodimer.
 |
MATERIALS AND METHODS |
Plasmids.
All constructs made were verified by dideoxy
sequencing utilizing the Sequenase system (United States Biochemical
Corp., Cleveland, Ohio). The pSV2gpt, pE
A6, pIBI31(BYRF), pgCAT,
pgLRS(
54)CAT, pgLRS(
106)CAT, and
pgLRS(
634)CAT constructs have been described previously
(20, 52, 55). The LRS is defined as nucleotides 169477 to
170151 of B95-8 EBV DNA, which corresponds to positions
634 to +40
relative to the transcription initiation site.
To make a series of Sp and ATF/CRE mutated reporter plasmids, PCR
amplifications were performed with the pgLRS(
152)CAT plasmid (55) as a template and primers that resulted in fragments
with one end corresponding to position +40 in LRS and the other end corresponding to position
58, with mutations in the Sp site (G to T
in position
33 and
32) or the ATF/CRE site (C to A in position
40
and G to T in position
41). The PCR fragments were cloned into the TA
cloning vector (Invitrogen, NV Leek, The Netherlands). Taking advantage
of a synthetic HindIII site in one primer and a
PstI site in the TA cloning vector, the PCR fragments were
then cloned between the HindIII and PstI
sites in the pgCAT plasmid. To generate the pgLRS(
106)CAT
plasmid with the Sp or ATF/CRE site mutated, the pgLRS(
58)CAT
constructs were digested with HindIII and
MluI and the HindIII-MluI LRS
fragments that contained the
54/+40 part of LRS were isolated. The
wild-type pgLRS(
106)CAT was cleaved with the same enzymes,
and the MluI-HindIII fragment corresponding
to positions
106 to
55 was isolated and ligated with the mutated
54/+40 LRS fragments and HindIII-cleaved pgCAT, generating pgLRS(
106)(Spmut)CAT and
pgLRS(
106)(ATF/CREmut)CAT. The mutated
pgLRS(
634)CAT constructs were generated by ligating the
mutation-containing HindIII-MluI fragments
described above into the
HindIII-MluI-digested pgLRS(
634)CAT
vector, resulting in pgLRS(
634)(Spmut)CAT and
pgLRS(
634)(ATF/CREmut)CAT. The pgLRS(
106)
CAT vector used for in vitro transcription of the probe in RNase protection experiments was made by cloning the PvuII-SalI
LRS fragment of pgLRS(
106)CAT in the
SmaI-SalI sites of the Gemini 3Zf(+) vector (Promega Corp., Madison, Wis.). The pCMV-Sp1 plasmid was a gift from G. Suske (Klinikum der Philipps-Universität Marburg, Marburg, Germany). The cDNA for human ATF-2 was kindly provided by C. Svensson-Akusjärvi (Uppsala University, Uppsala, Sweden). The
ATF-2-encoding cDNA was amplified by PCR and cloned into the TA cloning
vector. The ATF-2 gene-containing fragment was excised with
BstXI and ligated into the pcDNAI/Amp plasmid (Invitrogen),
resulting in the pc(ATF-2) expression vector. An expression vector for
human ATF-1, designated pc(ATF-1), was made by cloning the human cDNA
for ATF-1 obtained by XbaI cleavage of the pET-15b(ATF-1)
plasmid, a gift from R. H. Goodman (Oregon Health Science
University, Portland, Oreg.), in pc(ATF-1). An expression vector for
rat CREB-1, designated pc(CREB-1), was generated by cloning the CREB341
cDNA-containing BamHI-XbaI fragment of
pET-15b(CREB341), also provided by R. H. Goodman, in pcDNAI/Amp.
To generate an expression vector for human c-Jun, cDNA was isolated
from the pCMV c-jun vector, kindly supplied by R. Tjian
(University of California Berkeley, Berkeley, Calif.) by cleavage with
BamHI and PvuII and was cloned into
BamHI-EcoRV-digested pcDNAI/Amp. The resulting
plasmid was designated pc(c-jun).
The EBNA2 expression vector pc(BYRF) was constructed as follows. First,
part of the BYRF open reading frame was subjected to PCR amplification
with a sense oligonucleotide with two new restriction enzyme sites
(XhoI-NdeI) and the BYRF translation start
sequence and an antisense primer corresponding to the sequence around
the BamHI Y/H cleavage site. Then the fragment was excised and subcloned between the XhoI and BamHI sites in
pE
A8 (52), re-creating the complete BYRF sequence with
the addition of a NdeI site close to the translation
initiation codon. The EBNA2-encoding NdeI-BglII
fragment of this plasmid was cloned in the XbaI site of the
pCI vector (Promega) with XbaI linkers. Finally, the
EBNA2-encoding EcoRI-SalI fragment of this
plasmid was cloned between the EcoRI-XhoI sites
in the pcDNAI/Amp plasmid, creating the pc(BYRF) vector. The pE300CY6
vector, which allows the expression of a truncated version of rat CD2,
was most kindly provided by E. Lundgren (University of Umeå, Umeå,
Sweden), and the E1A 13S expression vector was provided by C. Svensson-Akusjärvi.
Cell culture, DNA transfections, and CAT assays.
DG75 is an
EBV genome-negative BL cell line (6). The lymphoid cells
were maintained as suspension cultures in RPMI 1640 medium (Life
Technologies AB, Täby, Sweden) supplemented with 10% fetal calf
serum (Life Technologies AB), penicillin, and streptomycin. Transfections were generally performed with 5 × 106
DG75 cells, 6.0 to 10 µg of DNA of the reporter construct to be
tested, and 1.4 pmol of DNA of the EBNA2 expression vector pE
A6 or
the pSV2gpt control plasmid by electroporation at 260 V and 960 µF in
250 µl of cell culture medium with the Bio-Rad Gene Pulser and
4-mm-gap cuvettes (Bio-Rad, Hercules, Calif.). The cells were harvested
after 72 h, and aliquots of the cell lysates were assayed for
chloramphenicol acetyltransferase (CAT) activity (51). For
Sp1 transfections (see Fig. 6), 0.95 pmol of the pCMV-Sp1 vector or the
pCMV control vector, 0.68 pmol of the EBNA2 expression vector pE
A6
or the pSV2gpt control, and 6.0 µg of the reporter plasmid were used.
In the ATF-1 and CREB-1 transfections (see Fig. 7A), 3.6 pmol of either
pc(ATF-1) or pc(CREB-1) or, alternatively, 1.8 pmol of each of the
vectors or 3.6 pmol of the pcDNAI/Amp (from now on designated pc)
control vector were used together with 0.68 pmol of EBNA2 expression
vector pE
A6 or 0.68 pmol of the pSV2gpt control vector and 5.0 µg
of the respective reporter construct. In the ATF-2 and c-Jun
transfections (see Fig. 7B), 3.6 pmol of pc(ATF-2), or 0.20 pmol of
pc(c-jun) and 3.4 pmol of pc, or 1.8 pmol of pc(ATF-2) and 0.10 pmol of
pc(c-jun) and 1.7 pmol of pc, or 3.6 pmol of pc was used together with
0.68 pmol of EBNA2 expression vector pc(BYRF) or 0.68 pmol of the pc control vector and 5.0 µg of the respective reporter construct. For
the study of the effect of EBNA2 on phosphorylation (see Fig. 8), 1.4 pmol of pE
A6, pSV2gpt, and the E1A 13S expression vector, respectively, was cotransfected with 10 µg of the pE300CY6 plasmid into 107 DG75 cells. In the immunoprecipitation experiments
(see Fig. 10) 1.8 pmol of pc(ATF-2) and 0.1 pmol of pc(c-jun) were
cotransfected with 10 µg of the pE300CY6 plasmid into 107
DG75 cells together with either 0.68 pmol of the EBNA2 expression vector pc(BYRF) or 0.68 pmol of the pc control vector.
RNase protection assay.
Cytoplasmic RNA was prepared and
analyzed by the RNase protection assay as described previously
(51). 32P-labelled RNA was synthesized by in
vitro transcription of pgLRS(
106)
CAT with
[
-32P]UTP (3000 Ci/mmol; Du Medical Scandinavia AB,
Sollentuna, Sweden) and T7 RNA polymerase by following a standard
procedure. Hybridization was performed at 50°C.
EMSA.
Nuclear extracts were prepared as described previously
(18), except that antipain (5.0 µg/ml), leupeptin (5.0 µg/ml), and aprotinin (2.0 µg/ml) were added to the buffer in the
final homogenization and dialysis steps and phenylmethylsulfonyl
fluoride was substituted by Pefabloc (0.50 mM). Aliquots were frozen in
liquid nitrogen and stored at
70°C. The following double-stranded
synthetic oligonucleotides were used in the mobility shift assays: an
oligonucleotide corresponding to the
50 to
19 part of LRS; a
similar oligonucleotide in which the Sp site was mutated by the
introduction of G-to-T mutations between nucleotides
33 and
32; and
an oligonucleotide corresponding to an AP-1 consensus sequence
(5'-CGCTTGATGACTCAGCCGGAA-3'). The blunt-ended
oligonucleotides were labelled with [
-32P]ATP (6,000 Ci/mmol, Du Medical Scandinavia AB) by using polynucleotide kinase
(Boehringer Mannheim Scandinavia AB, Bromma, Sweden). The labelled
probes were purified by electrophoresis in a 5% polyacrylamide gel
(acrylamide/bisacrylamide, 30:1) in 0.5× TBE (50 mM Tris, 50 mM boric
acid, 1.0 mM EDTA [pH 8.3]). The wet gel was autoradiographed, and
the DNA fragments were excised, electroeluted by isotachophoresis (48a), and precipitated. Binding-reaction mixtures (in 25 µl) with crude nuclear extract contained 10 mM Tris-HCl (pH 7.5), 50 mM NaCl, 1.0 mM dithiothreitol, 1.0 mM EDTA, 5% glycerol, various amounts (0.30 to 7.0 µg) of poly(dA-dT), 6.0 fmol of
[32P]DNA (approximately 70,000 cpm) and various amounts
(1.0 to 20 µg) of nuclear proteins (always added last).
Binding-reaction mixtures (in 25 µl) with in vitro-translated
proteins contained 10 mM HEPES (pH 7.9), 50 mM KCl, 6.0 mM
MgCl2, 2.5 mM dithiothreitol, 100 µg of bovine serum
albumin (BSA) per ml, 0.01% Nonidet P-40, 10% glycerol, 6.0 fmol of
[32P]DNA (approximately 70,000 cpm), and 5.0 µl of
programmed rabbit reticulocyte lysate. In the competition experiment, a
200- or 300-fold excess of competing oligonucleotide was added before the 32P-labelled probe. After incubation at room
temperature for 25 min, the samples were electrophoresed on 5%
polyacrylamide gels (acrylamide/bisacrylamide, 30:1) in 0.5× TBE. The
unlabelled competitors used were as follows: probe oligonucleotide
corresponding to LRS
50/
19,
5'-GAGGCTTATGTAGGGCGGCTACGTCAGAGTAA-3'; nonspecific
oligonucleotide, 5'-ATGTTCGGTAACATCTCTCATTGCGCACAAAGAACCCTACATCCG-3'; ATF/CRE
consensus oligonucleotide, 5'-AAGATTGCCTGACGTCAGAGAGCTAG-3';
Sp consensus oligonucleotide, 5'-ATTCGATCGGGGCGGGGCGAGC-3';
The HindIII-MluI fragment of
pgLRS(
106)(Spmut)CAT corresponding to LRS
54 to +40
with a mutated Sp site (two G nucleotides at positions
32 and
33 were replaced by two T nucleotides); the corresponding HindIII-MluI fragment of
pgLRS(
106)(ATF/CREmut)CAT with a mutated ATF/CRE site (CG at positions
40 and
41 were replaced by AT); the
corresponding HindIII-MluI fragment of
pgLRS(
106)(Sp+ATF/CREmut)CAT with mutated Sp and ATF/CRE
sites (C, T, G, and A at positions
37,
38,
41,
44, were changed
to T, A, A, and T).
The antibodies against the transcription factors Sp1 (sc-59X), Sp3
(sc-644X), CREB-1 (sc-271X), CREB-2 (sc-200X), ATF-1 (sc-243X), ATF-2
(sc-187X), c-Jun (sc-822X), c-Jun/Jun B/Jun D (sc-44X), Jun B (sc-46X),
and Jun D (sc-74X) (Santa Cruz Biotechnology, Inc., Santa Cruz, Calif.)
were used. The supershift analyses were performed as described above
for the EMSA experiments except that 3.0 to 8.0 µl of the respective
antibody was added after the incubation at room temperature. The
mixture was incubated at 4°C for 60 min and then subjected to
polyacrylamide gel electrophoresis (PAGE) (5.0% polyacrylamide)
followed by autoradiography.
For in vitro expression, a fragment of pE
A6 containing the
EBNA2-encoding open reading frame, BYRF1, was subcloned into the pIBI
31 vector (IBI, New Haven, Conn.). The cDNAs for ATF-2 and c-Jun were
translated in vitro with the pc(ATF-2) and pc(c-jun) constructs. The
supercoiled DNA templates were sequentially transcribed and translated
in the same reaction mixture containing rabbit reticulocyte lysate
(Promega Corp.), amino acids, and the T7 RNA polymerase, as recommended
by the manufacturer. Translated proteins were analyzed by sodium
dodecyl sulfate (SDS)-PAGE.
CD2 selection.
To introduce a marker for cell sorting, the
CD2 expression vector pE300CY6 was cotransfected with the EBNA2
expression vector (pE
A6), the E1A 13S expression vector, and the
pSV2gpt control plasmid. The transfected cells were collected by
centrifugation after 48 h and washed. Sorting for CD2 expressing
cells was performed with a mouse CD2-specific antibody (MCA154;
Serotec, Oxford, United Kingdom) and magnetic beads linked to rat
anti-mouse antibodies (Dynabeads M450; Dynal Ltd., Merseyside, United
Kingdom) as described by Pilon et al. (49). The cells were
lysed in lysis buffer (20 mM imidazole-HCl [pH 6.8], 100 mM KCl, 1.0 mM MgCl2, 10 mM EGTA, 0.20% [vol/vol] Triton X-100, 10 mM NaF, 1.0 mM sodium vanadate, 1.0 mM sodium molybdate, 5.0 µg of
leupeptin per ml, 2.0 µg of aprotinin per ml), incubated for 15 min
at 4°C, and cleared by centrifugation. The protein concentration in
the lysates was determined (Bradford protein assay; Bio-Rad), and
aliquots were mixed with sample buffer containing 65 mM Tris-HCl (pH
6.8), 2.0% SDS, 10% glycerol, 5.0%
-mercaptoethanol, and 0.10%
bromphenol blue (BPB). A 50-µg portion of protein from the respective
sample was boiled and subjected to SDS-PAGE (10% polyacrylamide).
Total c-Jun, c-Jun phosphorylated at Ser63 or Ser73, total ATF-2, and
ATF-2 phosphorylated at Thr71 were detected with the PhosphoPlus
antibody kits (New England Biolabs, Inc., Beverly, Mass.). It should be
noted that the anti-c-Jun(Ser73) antibody also recognizes JunD
phosphorylated at Ser100. The negative control consisted of total-cell
extract from NIH 3T3 cells, and the positive controls were extracts of UV-treated (c-Jun) or anisomycin-treated (ATF-2) NIH 3T3 cells.
Immunoprecipitation and immunoblot analysis.
DG75 cells were
harvested 48 h after transfection and subjected to CD2 selection
as described above. B95-8 cells and the selected DG75 cells were lysed
as described above, sonicated, and cleared by centrifugation. Aliquots
corresponding to 0.9 × 106 DG75 cells and 1.8 × 106 B95-8 cells were immunoprecipitated with 30 µg of
anti-ATF-2 (sc-187X; Santa Cruz Biotechnology, Inc.) per ml and 30 µg
of anti-c-Jun (sc-822X; Santa Cruz Biotechnology, Inc.) per ml,
respectively, in a total volume of 300 µl and incubated at 4°C
overnight. Samples without antibody were used as negative controls.
Aliquots (50 µl) of 50% protein A/G agarose (Santa Cruz
Biotechnology, Inc.) in lysis buffer containing 10 µg of BSA per ml
were added, the samples were rocked at 4°C for 2 h, and the
protein A/G agarose beads were collected by centrifugation. After the
beads had been washed five times in lysis buffer plus BSA, the proteins
were eluted by boiling in 40 µl of sample buffer, analyzed by
SDS-PAGE (10% polyacrylamide), and blotted to Hybond C-extra
nitrocellulose membranes (Amersham Life Science, Little Chalfont,
United Kingdom). The membranes were incubated with rabbit anti-c-Jun
antibodies (sc-822X), mouse anti-ATF-2 antibodies (sc-187X), or a human
serum containing anti-EBNA2 antibodies in phosphate-buffered saline (PBS; 180 mM NaCl, 3.6 mM KCl, 11 mM Na2HPO4,
2.0 mM KH2PO4) containing 0.5% nonfat dry milk
and, after repeated washings in PBS, incubated with horseradish
peroxidase-conjugated donkey anti-rabbit (Amersham Life Science), sheep
anti-mouse (Amersham Life Science), or goat anti-human (Bio-Rad)
antibodies. The membrane was washed in PBS containing 0.3% Tween 20, and the proteins were visualized by enhanced chemiluminescence
procedures as described by the manufacturer of the reagents (Amersham
Life Science).
 |
RESULTS |
EBNA2-induced transactivation of the LMP1 promoter depends on
intact Sp and ATF/CRE motifs in LRS.
In previous studies, we have
demonstrated that the
106 to +40 part of LRS contains one or several
elements that mediate EBNA2-induced upregulation of promoter activity
(19, 21, 55). Two short subsequences in this region were
defined with homology to an Sp and an ATF/CRE site, respectively (Fig.
1) (21). Mutation analysis provided evidence for a role of the ATF/CRE site in promoter
transactivation (21). However, subsequent binding studies
revealed that this mutation prevented the binding of factors to both
the Sp site and the ATF/CRE site. To assess the relative contribution
of the two sites to promoter activity and to further elucidate their role in the EBNA2-induced transactivation process, LRS-carrying reporter plasmids were created with specific mutations of the respective sites. The pgLRS(
106)CAT plasmid contained the
106 to +40 part of LRS and was mutated as indicated in Materials and Methods. To determine the effect of the mutations in the context of the
complete LRS, mutated derivatives of the pgLRS(
634)CAT reporter plasmid were generated. The plasmids were cotransfected with
an EBNA2 expression vector or a control plasmid into the EBV-negative
DG75 B-cell line. Mutation of the ATF/CRE site in pgLRS(
106)CAT reduced the EBNA2-induced activity to 8.0%
relative to the wild-type plasmid, i.e., close to the activity of the
background plasmid pgCAT (Fig. 2).
Mutation of the Sp site left a low residual EBNA2-induced activity of
16% relative to the wild-type plasmid (Fig. 2). The corresponding
mutations in the LRS(
634)CAT plasmids similarly resulted in a
pronounced reduction of activity (Fig. 2). Thus, the results clearly
showed that the two sites are important for the EBNA2-dependent
transactivation of the LMP1 promoter, especially in the context of the
promoter-proximal part of LRS. The full-length LRS seemed to contain
elements that to a certain extent could compensate for the loss of the
ATF/CRE site at position
41.

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FIG. 1.
Schematic presentation of the LRS in the B95-8 EBV
genome. The scale refers to the position relative to the transcription
initiation site from the EDL1 promoter. Transcription factor-binding
sites previously identified as involved in regulation of the LMP1
promoter are indicated by open boxes. The Sp and the ATF/CRE sites are
defined in the present investigation.
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FIG. 2.
EBNA2-induced transactivation of LRS depends on intact
Sp and ATF/CRE motifs in LRS. Mutations were introduced in the
pgLRS( 106)CAT and pgLRS( 634)CAT plasmids,
respectively, as indicated in Materials and Methods. The reporter
plasmids were cotransfected with pE A6 (+EBNA2) or with an equivalent
amount of pSV2gpt ( EBNA2) in the EBV-negative B-cell line DG75. The
CAT activity is given as relative chloramphenicol acetylation expressed
as a percentage of the activity obtained with pgLRS( 634)CAT
in the presence of EBNA2. The 100% value corresponded to acetylation
of 97% of the substrate in the assay. The values are the mean of three
independent transfections. The standard errors are indicated by error
bars.
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|
To confirm that the observed transactivation of the reporter plasmids
was due to correctly initiated transcripts from the EDL1 promoter,
RNase protection analysis was performed. The result showed that
transcription was initiated at the correct LRS position in the
constructs investigated (Fig. 3).

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FIG. 3.
EBNA2-induced transcription initiates at the correct
LMP1 promoter site in reporter plasmids. RNA was prepared from DG75
cells transfected with the EBNA2 expression vector pE A6 or the
pSV2gpt control vector and the indicated LRS CAT reporter plasmids and
subjected to RNase protection analysis with a 32P-labelled
probe corresponding to positions 106 to +40 of LRS and the first part
of the CAT gene. Lanes: 1, probe only; 2, pgLRS( 54)CAT
and pSV2gpt; 3, pgLRS( 54)CAT and pE A6; 4, pgLRS( 106)CAT and pSV2gpt; 5, pgLRS( 106)CAT and
pE A6; 6, pgLRS( 634)CAT and pSV2gpt; 7, pgLRS( 634)CAT and pE A6; 8, pgCAT and pSV2gpt; 9, pgCAT and
pE A6; 10, DNA size markers. The band corresponding to the common
initiation site in the EDL1 promoter is indicated by the solid arrow.
Bands corresponding to nonspecific initiation upstream of LRS in the
vector part of the reporter plasmids are indicated by dotted arrows.
The lengths of these protected fragments differ depending on the
plasmid. The solid arrowhead indicates a band present in all samples,
probably due to incomplete RNase cleavage.
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Identification of factors binding to the Sp and ATF/CRE
motifs.
We next characterized the regulatory factors in DG75 cells
that bound to the Sp and ATF/CRE elements by performing EMSAs with a
double-stranded oligonucleotide corresponding to the
50 to
19 part
of LRS. Competition experiments with unlabelled oligonucleotides containing intact Sp or ATF/CRE consensus sequences or LRS fragments with mutations of the corresponding sites were carried out to correlate
the resulting EMSA bands with the binding sites. Five specific
complexes were identified (Fig. 4, lanes
2 and 3). Bands that were not abolished by competition with unlabelled
probe were assumed to represent nonspecific complex formation. It might
be noted that the same binding pattern was observed both with
EBV-negative and EBV-positive B cells and with epithelial cells and T
cells (data not shown). Competition with an LRS fragment that contained a mutated Sp site (lanes 6 and 7) removed three of the bands and left
two bands. These complexes presumably represented binding to the Sp
site. Competition with an LRS fragment that contained a mutated ATF/CRE
site (lanes 10 and 11) removed the two bands marked Sp and left three
bands. These were assumed to represent binding to the ATF/CRE site.
Furthermore, an LRS fragment mutated in both the Sp and the ATF/CRE
site did not compete with any of the complexes (lanes 8 and 9).
Competition with an oligonucleotide that contained an Sp consensus
sequence removed the two Sp bands (lane 5), and an oligonucleotide that
contained an ATF/CRE consensus sequence removed the three ATF/CRE bands
(lane 4). It was noted that although the EMSA band patterns were
similar in qualitative terms, the intensity of the bands was weaker
when DNA fragments (lanes 6 to 11) were used as competitors compared
with the bands obtained with the corresponding synthetic
oligonucleotides (lanes 3 to 5), even though similar molar amounts of
competitor had been used. The reason is not clear, but we suggest that
the effect was nonspecific and was related to the fact that competitors
of different lengths were used (the average length of the
oligonucleotides was about 30 bp, and the length of the LRS fragments
was about 90 bp).

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FIG. 4.
Sp and ATF/CRE transcription factors in B-lymphoid cells
bind to LRS. A 32P-labelled double-stranded synthetic
oligonucleotide corresponding to the 50 to 19 LRS region was
incubated with nuclear extracts from DG75 cells and subjected to EMSA.
Lane 1 shows the binding pattern obtained with the nuclear extract.
Competition reactions was carried out as indicated below the
autoradiogram and described in Materials and Methods. In lanes 2 to 5, the binding mixtures contain a 300-fold excess of unlabelled competitor
over probe; in lanes 6, 8, and 10, they contain a 200-fold excess; and
in lanes 7, 9, and 11, they contain a 300-fold excess. Some of the
competitors were mutated at the Sp and/or the ATF/CRE sites as
specified in Materials and Methods. Five complexes indicated by solid
arrows are considered specific and designated Sp (bands remaining after
competition with an LRS fragment that contained a mutated Sp site) and
ATF/CRE (bands remaining after competition with an LRS fragment that
contained a mutated ATF/CRE site), respectively. Three nonspecific
bands that were not abolished by competition with unlabelled probe are
indicated by dotted arrows.
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To identify the members of the Sp and ATF/CREB transcription factor
families that were involved in the formation of a complex with the
50/
19 LRS probe, we performed antibody supershift analysis with
different commercially available antibodies (Fig.
5). To simplify the band pattern, the
first series of EMSAs were carried out as competition experiments with
a 300-fold molar excess of the unlabelled LRS probe containing a
mutated Sp binding site, which allowed only Sp-related factors to bind
to the labelled probe. As illustrated in Fig. 5A, one of the complexes
supershifted with an anti-Sp1 antibody (lane 2) and the other two
supershifted with an anti-Sp3 antibody (lanes 3 and 4). One of the
Sp3-containing complexes was hidden behind the strong band
corresponding to the Sp1 complex; therefore, the supershift became
evident only when the anti-Sp1 and anti-Sp3 antibodies were added
simultaneously. The anti-Sp3 antibody removed the two Sp3-containing
EMSA complexes but did not give rise to supershifted bands in the gel,
due to the inhibition of complex formation by the antibody.

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FIG. 5.
Identification of the transcription factors interacting
with the Sp and ATF/CRE motifs in LRS. (A) Nuclear extract of DG75
cells was incubated under binding conditions with a
32P-labelled double-stranded oligonucleotide corresponding
to the 50 to 19 LRS region in the presence of a 300-fold molar
excess of the competitor LRS 50/ 19 with a mutated Sp site. Antibody
supershifts were carried out by incubation with a goat polyclonal
antibody against Sp1, a rabbit polyclonal antibody against Sp3, and a
mixture of the antibodies, as indicated below the autoradiogram. The
reaction mixtures were analyzed by EMSA. Three specific complexes are
indicated by solid arrows, one designated Sp1 and two designated Sp3.
Two bands that were not abolished by competition are indicated by the
dotted arrows. The position of the anti-Sp1 antibody-shifted complex is
shown by the solid arrowhead. (B and C) EMSA and antibody supershift
analysis were performed by incubating nuclear extract of DG75 cells
under binding conditions with a 32P-labelled
double-stranded oligonucleotide corresponding to the LRS 50 to 19
region with a mutated Sp site and with antibodies as indicated below
the autoradiogram. Two bands that were not abolished by competition are
indicated by the dotted arrows. (B) Three specific complexes are
indicated by solid arrows, two of which are designated ATF-1, CREB-1
since they contain both factors. The positions of the antibody
complexes are indicated by an open arrowhead for the anti-CREB-1 shift
and solid arrowheads for the anti-ATF-1 shifts. (C) The third of the
three specific complexes indicated by solid arrows is identified as
ATF-2, c-Jun. The positions of the immunologically shifted complexes
are shown by the solid arrowheads for the anti-ATF-1 shifts and the
open arrowhead for the anti-c-Jun shift.
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The ATF/CREB antibody supershift analyses were carried out with a
labelled
50/
19 LRS probe with a mutated Sp site, which allowed the
formation of complexes only with the ATF/CRE site of the probe (Fig. 5B
and C). Two of the three complexes were supershifted by both an
anti-CREB-1 antibody (Fig. 5B, lane 2) and an anti-ATF-1 antibody (lane
4). The third ATF/CRE complex was removed by an anti-ATF-2 antibody
(Fig. 5C, lane 3) and an anti-c-Jun antibody (lane 5) and shifted by
another anti-c-Jun antibody (lane 4).
Involvement of an Sp site in the regulation of the LMP1
promoter.
Our results showed that the Sp site at position
33 in
the promoter-proximal region of LRS had to be present to achieve
EBNA2-induced transactivation of the LMP1 promoter and that both the
Sp1 and Sp3 factors bound to this site. The ability of Sp1 to
transactivate the promoter was assessed by transient transfections with
Sp1 and EBNA2 expression vectors and a pgLRS(
106)CAT reporter
plasmid. In the absence of EBNA2, the Sp1 vector induced a low level of transactivation compared with the control plasmid (Fig.
6). The activation was, however,
significantly higher than that obtained with a reporter plasmid in
which the Sp site was mutated. The Sp1 expression vector did not add to
the activity of the pgLRS(
106)CAT plasmid induced by EBNA2,
although mutation of the Sp site largely abolished promoter activity.
This suggests that Sp1 has an EBNA2-independent stimulatory effect on
LMP1 promoter activity. Protein levels in the transfected cells were
checked by immunoblot analysis (data not shown). The amount of Sp1 in
the cells increased from a basal level after transfection with the
expression vector.

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FIG. 6.
Sp1 transactivates the LMP1 promoter independently of
EBNA2. The pCMV-Sp1 expression vector or an equivalent amount of the
empty pCMV control plasmid was cotransfected with the EBNA2 expression
vector pE A6 or the pSV2gpt plasmid with the pgLRS( 106)CAT
reporter plasmid or the mutated derivative
pgLRS( 106)(Spmut)CAT in DG75 cells. The CAT activity is
expressed as percent chloramphenicol acetylation, with the value
obtained with the pCMV plasmid together with pE A6 and
pgLRS( 106)CAT as 100%. The standard errors are indicated by
error bars. The 100% value corresponded to 22% conversion of
substrate to product in the CAT assay. The values presented are the
mean of four independent transfections.
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ATF-1 and CREB-1 can activate the LMP1 promoter in an
EBNA2-independent manner.
We have previously reported on the
existence of a possible relationship between the EBNA2 effect on LMP1
in B cells and the cAMP signal transduction pathway and provided
evidence for the notion that the ATF/CRE site in the
106/+40 part of
LRS is a possible target in the EBNA2-induced activation of the
promoter (21). The EMSA results of the present study
indicated that the CREB-1 and ATF-1 factors are candidate mediators of
the activating effect. To investigate this question, ATF-1 and CREB-1
expression vectors, separately or in combination, were cotransfected
with the pgLRS(
106)CAT plasmid with or without an EBNA2
expression vector in DG75 cells. As illustrated in Fig.
7A, overexpression of CREB-1 or ATF-1
activated the LRS(
106)-containing reporter plasmid independently
of EBNA2. The activating effect was largely abolished when the ATF/CRE
site was mutated. The residual ATF-1-mediated transactivation of the
mutated LRS reporter plasmid most probably did not originate from the
ATF/CRE site, since EMSA analysis showed that the transcription factors
no longer bound to the mutated site (data not shown). Transfection with
a mixture of half the amount of each of the expression vectors resulted
in a level of activation intermediate between those obtained with the
ATF-1 and a CREB-1 expression vectors separately. Concomitant
expression of EBNA2 did not significantly increase the activity of the
LRS reporter plasmid. Protein levels in the transfected cells were checked by immunoblot analysis (data not shown). The ATF-1 and CREB-1
protein concentrations increased from a basal level, and the EBNA2
protein appeared when the respective expression vectors were introduced
into the cells. We suggest that the CREB-1 and ATF-1 factors separately
and together are able to activate the LMP1 promoter via the ATF/CRE
site at position
41 in LRS independently of each other and of EBNA2.

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FIG. 7.
The LMP1 promoter can be transactivated by CREB-1 and
ATF-1 homo- and heterodimers independently of EBNA2 and by a
c-Jun/ATF-2 heterodimer in an EBNA2-dependent manner. (A) The
pc(ATF-1), and pc(CREB-1) expression vectors, separately or mixed, or
the pc control plasmid was cotransfected with the EBNA2 expression
vector pE A6 or an equivalent amount of pSV2gpt and the reporter
plasmids pgLRS( 106)CAT or
pgLRS( 106)(ATF/CREmut)CAT into DG75 cells, as detailed in
Materials and Methods. The CAT activity is expressed as the percent
chloramphenicol acetylation relative to the value obtained in
transfections with the pc plasmid together with pE A6 and
pgLRS( 106)CAT. The 100% value corresponded to 21%
conversion of substrate to product in the CAT assay. The standard
errors are indicated with error bars. The values shown are the mean of
three independent transfections. (B) The pc(ATF-2) and pc(c-Jun)
expression vectors, separately or in combination, or the pc control
plasmid was cotransfected with the EBNA2 expression vector pc(BYRF) or
an equivalent amount of the pc plasmid and the reporter plasmids
pgLRS( 106)CAT or pgLRS( 106)(ATF/CREmut)CAT into
DG75 cells, as detailed in Materials and Methods. The CAT activity is
expressed as the percent chloramphenicol acetylation relative to the
value obtained in transfections with the pc plasmid together with
pc(BYRF) and pLRS( 106)CAT. The 100% value corresponded to
12% conversion of substrate to product in the CAT assay. The standard
errors are indicated by error bars. The values shown are the mean of
three independent transfections.
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EBNA2 can transactivate the LMP1 promoter via the ATF/CRE site and
a c-Jun/ATF-2 heterodimer.
According to the EMSA results, the
ATF-2 and c-Jun factors interact at the ATF/CRE site at position
41
in the LRS. To investigate the possible role of these factors in the
EBNA2-dependent activation of the EDL1 promoter, ATF-2 and c-Jun
expression vectors were transfected together with an EBNA2 expression
vector and pgLRS(
106)CAT in DG75 cells. In the absence of
EBNA2, the homodimers of ATF-2 or c-Jun did not significantly increase
the basal activity of the reporter plasmid (Fig. 7B). The heterodimeric
forms of the factors transactivated the promoter about twofold.
However, coexpression of ATF-2, c-Jun, and EBNA2 in the cells resulted
in a strong and ATF/CRE site-dependent activation of the promoter.
Immunoblotting control experiments showed that ATF-2 and c-Jun protein
levels increased and that EBNA2 appeared in the cell extracts after
transfection (data not shown). It should be noted that a
cytomegalovirus promoter-driven EBNA2 expression vector was used in
these experiments since the EBNA2 expression of our standard pE
A6
plasmid was downregulated in the presence of c-Jun. This new vector
expressed EBNA2 less well, giving rise to seemingly lower EBNA2
inducibility of the reporter constructs.
It has been established that phosphorylation of defined amino acid
residues in c-Jun (Ser-63 and Ser-73) and ATF-2 (Thr-69 and Thr-71) is
required to generate efficient transactivational function of the
factors. Therefore, the following question arises: does EBNA2 modify
the phosphorylation state and/or the levels of these factors as a means
of inducing activation of the LMP1 promoter? This possibility was
studied in EBNA2 cotransfection experiments with commercially available
antibodies with the ability to specifically identify phosphorylated
forms of the c-Jun and ATF-2 proteins (Fig.
8). Induction of phosphorylation and
increased expression of c-Jun by the adenovirus E1A protein was used as an experimental control. The results showed that EBNA2 did not significantly affect either the total level or the phosphorylation state at the Ser-63/Ser-73 and Thr-71 residues, respectively, of c-Jun
or ATF-2. The DG75 cells apparently contained a significant endogenous
level of the factors in phosphorylated form. Thus, the results support
the notion that EBNA2 transactivation of the LMP1 promoter does not
occur through the phosphorylation of c-Jun or ATF-2.

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FIG. 8.
EBNA2 does not affect the level or phosphorylation state
of c-Jun or ATF-2 in DG75 cells. The EBNA2 expression vector pE A6 or
equivalent amounts of the pSV2gpt control plasmid or the E1A 13S
expression vector were transfected together with the CD2 expression
vector pE300CY6 in DG75 cells. The transfected cells were selected for
their CD2 expression with magnetic beads. The cells were lysed and
equal amounts of protein extract were analyzed by SDS-PAGE and
immunoblotting. The antibodies used in panel A were anti-c-Jun,
anti-phospho-c-Jun(Ser63), and anti-phospho-c-Jun(Ser73), and those
used in panel B were anti-ATF-2 and anti-phospho-ATF-2(Thr71). NIH 3T3
cell extracts containing nonphosphorylated or phosphorylated forms of
c-Jun (panel A, lanes 1 and 2) and ATF-2 (panel B, lanes 1 and 2),
respectively, were used as controls of antibody activity. The
anti-c-Jun(Ser73) antibody also detected JunD phosphorylated at the
Ser100 residue.
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To correlate the observed effects of overexpression of ATF-2 and/or
c-Jun on promoter activity with the binding of the respective factor at
the ATF/CRE site and to decide whether EBNA2 interacts with any of
these factors, a series of EMSAs were performed with in vitro
translation reaction mixtures containing ATF-2, c-Jun, and EBNA2,
respectively. Notably, the bands corresponding to the homomeric forms
of in vitro-synthesized ATF-2 and c-Jun were not affected by the
addition of EBNA2 (Fig. 9A, lane 5, Fig.
9B, lane 4). However, the heterodimeric complex formed by in
vitro-translated ATF-2 and c-Jun was removed by the addition of EBNA2
to the EMSA reaction mixture, showing that EBNA2 specifically interacts
with the heterodimer but not with the homodimeric forms of the two transcription factors (Fig. 9C, lane 6). The reason why the in vitro-translated heterodimer of c-Jun/ATF-2 migrated more slowly than
the in vivo-synthesized heterodimer in the nuclear extracts is not
clear. However, the results were also corroborated by an EMSA
experiment where addition of in vitro-translated EBNA2 to the nuclear
extract removed the c-Jun/ATF-2 complex from the EMSA pattern but left
the ATF-1/CREB-1 factors bound to the probe (data not shown).

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FIG. 9.
In vitro-translated EBNA2 abrogates the binding of the
in vitro-translated heterodimer c-Jun/ATF-2, but not the respective
homodimeric forms, to the ATF/CRE site. The 32P-labelled
oligonucleotide probes indicated in the figure were incubated with DG75
nuclear extract and/or in vitro-translated proteins and analyzed by
EMSA. The three specific complexes obtained with DG75 nuclear extract
and identified above are indicated by solid arrows and designated
ATF-1, CREB-1 and ATF-2, c-Jun. In vitro-translated proteins are
denoted by the prefix IVT, and the positions of the corresponding
complexes are shown by solid arrows. Nonspecific bands that were not
abolished by competition are indicated by the dotted arrows. (A) The
binding-reaction mixtures contained a 32P-labelled 50 to
19 LRS oligonucleotide probe with a mutated Sp site and DG75 nuclear
extract (lane 1) or the same probe with in vitro-translated ATF-2
(lanes 2 to 6). Antibody supershifts were performed by incubation with
a rabbit polyclonal antibody against ATF-2 (lane 3) or a rabbit
polyclonal antibody against CREB-2 (lane 4). A supershifted band is
indicated by a solid arrowhead. In lanes 5 and 6, aliquots of
reticulocyte in vitro translation reactions with EBNA2 DNA or control
DNA were added to the binding-reaction mixtures. (B) The
binding-reaction mixtures contained a 32P-labelled AP-1
consensus oligonucleotide probe and in vitro-translated c-Jun protein
(lane 1). Antibody supershifts were performed by incubation with a
mouse monoclonal antibody against c-Jun (lane 2) or a goat polyclonal
antibody against Jun B (lane 3). A supershifted band is indicated by a
solid arrowhead. In lanes 4 and 5, aliquots of reticulocyte in vitro
translation reaction mixtures with EBNA2 DNA or control DNA were added
to the binding-reaction mixtures. (C) The binding-reaction mixtures
contained 32P-labelled 50 to 19 LRS oligonucleotide
probe with a mutated Sp site and DG75 nuclear extract (lane 1) or in
vitro-translated ATF-2 and c-Jun protein (lanes 2 to 7). Antibody
supershifts were performed by incubation with a rabbit polyclonal
antibody against ATF-2 (lane 3), a mouse monoclonal antibody against
c-Jun (lane 4), or a goat polyclonal antibody against Jun B (lane 5).
Supershifted bands are indicated by solid and open arrowheads. In lanes
6 and 7, aliquots of reticulocyte in vitro translation reaction
mixtures with EBNA2 DNA or control DNA were added to the
binding-reaction mixtures.
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The results of the EMSA analysis suggested that EBNA2 has the ability
to interact with the c-Jun/ATF-2 heterodimer. To corroborate this
observation, experiments aimed at identifying a complex between EBNA2
and c-Jun and ATF-2 in cell extracts by immunoprecipitation were
performed (Fig. 10). Anti-ATF-2 and
Anti-c-Jun antibodies were used to precipitate the putative complex,
the precipitates were analyzed by SDS-PAGE and immunoblotting, and the
proteins were identified with anti-ATF-2 (Fig. 10A), anti-c-Jun (Fig.
10B), and anti-EBNA2 (Fig. 10C) antibodies. The results showed that
ATF-2 and c-Jun were precipitated by the respective antibody and that EBNA2 coprecipitated with both ATF-2 and c-Jun (Fig. 10C, lanes 4, 6, 7, and 9). In the controls without the primary antibody (lanes 10 to
12), none of the proteins were detected. The recombinant c-Jun protein
had a somewhat lower molecular weight than endogenously expressed
c-Jun, but the reason for this is not clear. It should be noted that
the EBNA2/c-Jun/ATF-2 complex was identified not only in a situation of
overexpression of the respective factors but also in nontransfected,
EBV-infected cells (B95-8 cells). Together, the results of the EMSA and
the immunoprecipitation experiments strongly suggest that EBNA2 can
transactivate the LMP1 promoter via the ATF/CRE motif and that a direct
interaction between EBNA2 and a heterodimeric complex of c-Jun and
ATF-2 constitutes an essential step in the activation process.

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FIG. 10.
EBNA2 coimmunoprecipitates with the c-Jun/ATF-2
heterodimer. The EBNA2 expression vector pc(BYRF) or equivalent amounts
of the pc control plasmid were transfected together with pc(c-Jun) and
pc(ATF-2) and the CD2 expression vector pE300CY6 in DG75 cells. The
transfected cells were selected for CD2 expression with magnetic beads.
After lysis of the cells, the proteins were immunoprecipitated with
specific antibodies and adsorption to protein A/G agarose, eluted, and
analyzed by SDS-PAGE and immunoblotting. Cell extracts that had not
been subjected to immunoprecipitation were analyzed in lanes 1 to 3, and control immunoprecipitations without the specific antibody but
including the adsorption step with protein A/G were analyzed in lanes
10 to 12. Lanes: 1, DG75 cells transfected with pc(BYRF); 2, DG75 cells
transfected with the pc plasmid; 3, B95-8 cells; 4, anti-ATF-2
precipitate from DG75 cells transfected with pc(BYRF); 5, anti-ATF-2
precipitate from DG75 cells transfected with the pc plasmid; 6, anti-ATF-2 precipitate from B95-8 cells; 7, anti-c-Jun precipitate from
DG75 cells transfected with pc(BYRF); 8, anti-c-Jun precipitate from
DG75 cells transfected with the pc plasmid; 9, anti-c-Jun precipitate
from B95-8 cells; 10, protein A/G agarose eluate from DG75 cells
transfected with pc(BYRF); 11, protein A/G agarose eluate from DG75
cells transfected with the pc plasmid; 12, protein A/G agarose eluate
from B95-8 cells. Antibodies used for visualizing the proteins on the
immunoblots were anti-ATF-2 (A), anti-c-Jun (B), and a human serum
containing anti-EBNA2 antibodies (C). The positions of ATF-2, c-Jun,
EBNA2, and immunoglobulin heavy chains (Ig H) are indicated by the
solid arrowheads.
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 |
DISCUSSION |
We have shown in previous studies that EBNA2-induced
transactivation of the LMP1 promoter in lymphoid cells depends to a
significant extent on transcriptional cis-elements in the
106/+40 part of LRS and that an ATF/CRE site in this region most
probably plays a role as a mediator of the EBNA2 effect and in promoter
activation by cAMP analogs (21, 55). In this study, using
the EBV-negative DG75 cell line as a model system for B cells, we
demonstrated that the LMP1 promoter can be activated in an
EBNA2-independent manner via a process that includes the binding of
ATF-1 and CREB-1 homo- or heterodimers to the ATF/CRE site whereas
EBNA2-dependent activation of the promoter, on the other hand, occurs
through a pathway that involves a direct interaction between EBNA2 and ATF-2-c-Jun heterodimers at the same site. In addition, the activity of the promoter is modulated in an EBNA2-independent way by the interaction of Sp1 and possibly Sp3 with an adjacent Sp element. We
have previously compared the activity of the LRS in a variety of cell
lines of epithelial and B-cell origin, including DG75 (20).
That study was not as detailed as the present one, but an important
conclusion was that all group I BL cell lines investigated, both EBV
negative and EBV positive, followed the same pattern with regard to
EBNA2-induced transactivation of LRS. We therefore consider the DG75
cell line to be representative of its category of B cells and useful
for investigations of the regulation of the LMP1 promoter. The reason
why several other investigations have failed to detect EBNA2
responsiveness in the proximal LMP1 promoter region is not clear to us.
It has been suggested that a cryptic RBP-J
site in our reporter
constructs is involved. A search for structural motifs in the proximal
part of the LRS with reasonable identity to a RBP-J
site revealed
the presence of a TTGGGAT sequence at positions
67 to
61. However, the results of EMSA competition analysis and
site-directed mutagenesis strongly argued against the possibility that
RBP-J
or any other factor binds to this motif (unpublished results).
Furthermore, we have consistently obtained the same EBNA2-induced
promoter response with the
106/+40 LRS fragment inserted in an
unrelated plasmid carrying the luciferase reporter gene. The EBNA2
expression vector used in our previous studies is a genomic construct
that would hypothetically allow the synthesis of a mini-version of
EBNA5 or some other unidentified product and might in this way be
responsible for discrepancies between our observations and those of
others. To eliminate this possibility, we repeated the experiments with another expression vector in which the cytomegalovirus early promoter was placed immediately upstream of a DNA fragment containing only the
EBNA2-encoding BYRF1 open reading frame from the B95-8 EBV strain. This
construct was considerably less efficient in EBNA2 expression than was
our standard EBNA2 expression vector pE
A6 but produced the same
result in qualitative terms with regard to EBNA2 responsiveness of the
106/+40 LRS region (data not shown). Furthermore, we have never
detected peptide material reacting with anti-EBNA5 antibodies in
EBV-negative cells (DG75 and COS-1 cells) transfected with the pE
A6
plasmid by immunoblot or immunofluorescence analysis (data not shown).
EBNA2-independent activation of LRS via the Sp and the ATF/CRE
sites.
Mutational analysis and EMSA binding studies showed that an
Sp element at position
33 in LRS is required for efficient
EBNA2-dependent and EBNA2-independent transactivation of the LMP1
promoter and that the Sp1 and Sp3 transcription factors bind to this
site. Sp1 is a well-known transcriptional activator. The
limited effect of overexpression of Sp1 on promoter activity in the
absence of EBNA2 obtained in our transfection experiments might be
explained by the fact that DG75 cells contain a high endogenous level
of the Sp1 factor that diminishes the relative contribution of the exogenously added protein. The Sp3 transcription factor has been shown
to function as a repressor of Sp1-mediated transcriptional activation
(28). Multiple Sp3-containing complexes similar to those
observed in our EMSA analyses have previously been found in another
system (16). We suggest that the stimulatory effect of Sp1
on the LMP1 promoter is independent of EBNA2 but is a prerequisite for
EBNA2 induced transactivation. The interaction of the Sp1 and Sp3
factors with their binding site in LRS might constitute an
EBNA2-independent regulatory system in which the balance between the
positively acting Sp1 and the negatively acting Sp3 factors is one of
the factors that determines the final level of activity of the LMP1
promoter.
It is now generally believed that bZIP proteins like ATF-1 and CREB-1
bind to DNA only as dimers and not as monomers. The results of the EMSA
and antibody supershift experiments in this study suggested that the
ATF-1 and CREB-1 proteins in DG75 cells bind to the ATF/CRE site at
position
41 in LRS as a heterodimer, since the homomeric forms of the
factors were not detected. The presence of two ATF-1/CREB-1 complexes
with different mobilities in the electrophoretograms is explained by
the previous observation that phosphorylation drastically changes the
conformation of ATF-1 and, as a consequence, the electrophoretic
mobility of the corresponding EMSA complex (46). It should
be noted, however, that overexpression of the factors in the cells by
transfection with expression vectors under conditions that favored the
formation of the homodimeric forms showed that these were as efficient
in inducing promoter activity as was the heterodimeric form (Fig. 7A).
The ATF-1 and CREB-1 factors are phosphorylated by protein kinase A
(PKA), which in most cases appears indispensable for activation (for a
review, see reference 47). The major effect of
phosphorylation seems to occur at the level of the transactivating
function, while the effects on dimerization and DNA binding are less
certain. Protein phosphatase 1 (PP-1) dephosphorylates ATF-1 and CREB-1 and correspondingly attenuates the transactivational activity of the
factors. The phosphatase inhibitor protein-1 (IP-1) is a specific
inhibitor of PP-1, and its activity is dependent on phosphorylation by
PKA. Thus, activation of PKA by cAMP would result in the
phosphorylation and activation of ATF-1/CREB-1 and IP-1, with the
latter leading to the inhibition of PP-1. Studies of purified ATF/CREB
proteins have demonstrated that the negatively charged and
phosphorylated kinase-inducible domain of the factors is responsible
for the interaction with components of the basal transcription
apparatus. We have previously suggested a model for EBNA2-induced
transactivation of the LMP1 promoter that involved the ATF/CRE site and
a direct inhibition of PP-1-catalyzed dephosphorylation of CREB-1 by
EBNA2 in an IP-1-analogous manner (21). However, our present
investigation does not support the hypothesis that activation of the
ATF/CRE site would occur through an EBNA2-induced increase of the
phosphorylated form of CREB-1 or ATF-1 at the binding site. EBNA2 did
not significantly increase the stimulatory effect of ATF-1 and CREB-1
on LRS-CAT reporter plasmids in DG75 cells (Fig. 7A) or change the
phosphorylation status of the transcription factors (data not shown).
The importance of this ATF/CRE site in LRS is also emphasised by the
results of Chen et al. (7). They showed that a sequence variant found in the corresponding ATF/CRE motif of an NPC EBV isolate,
when transferred into a B95-8 LRS sequence, conferred a threefold
reduction of the activity of the LMP1 promoter both in B cells and in
epithelial cells. Interestingly, the NPC sequence variant diminished
the absolute levels of activity of a reporter plasmid that carried the
495/+20 part of LRS in both the absence and presence of EBNA2 but did
not change the relative level of EBNA2 responsiveness in B cells. This
indicates that the EBNA2-independent promoter activation pathway is
disrupted by this sequence variant. It is consistent with our
conclusion that the ATF/CRE site is one of the limiting factors that
determine the final level of activity of the LMP1 promoter under
different induction conditions and cellular environments.
Treatment of BL lines in the EBNA1-positive form of latency (latency I)
with anti-immunoglobulin or with tetradecanoyl phorbol acetate induces
the lytic cycle via the protein kinase C (PKC) signal transduction
pathway. The switch to the lytic cycle involves the rapid upregulation
of LMP1 in the cells and occurs independently of EBNA2 expression
(53). It has been shown that CREB-1 and possibly ATF-1 can
be activated by phosphorylation via the PKC pathway in B lymphocytes
(69). It is thus conceivable that the LMP1 promoter can be
activated through the PKC pathway as well as the PKA pathway and that
the signal to the general transcriptional machinery is mediated in both
cases by ATF-1/CREB-1 dimers bound to the ATF/CRE site.
EBNA2-dependent activation of LRS via the ATF/CRE site.
The
results of this study lend strong support to the notion that EBNA2 can
activate the LMP1 promoter via a mechanism that is different from the
ATF-1/CREB-1 pathway discussed above and that involves the binding of
the ATF-2 and c-Jun factors as a heterodimer to the ATF/CRE site. EBNA2
is required for the activation (Fig. 7B) and, judging from the EMSA
(Fig. 9C) and coimmunoprecipitation (Fig. 10) experiments, seems to
make a direct contact with the c-Jun/ATF-2 dimer complex. Thus, the
question arises of how this interaction may lead to promoter
activation. Does EBNA2 induce a modification of the ATF-2/c-Jun dimer
and/or its binding site or change the concentration of the factors in
the cell nucleus in a way that favors promoter activation through the
activating domains of ATF-2 and c-Jun? Or is EBNA2 recruited to the
LMP1 promoter by protein-protein interactions with the ATF-2/c-Jun dimer to bring the EBNA2 transactivational domain in the correct position for a productive contact with one or several distinct general
transcription factors? The possibility also exists that the interaction
between EBNA2 and the c-Jun/ATF-2 dimer decreases the affinity of this
complex for the ATF/CRE site, leading to an increased binding of the
ATF-1 and CREB-1 factors and activation of the LMP1 promoter through
this pathway. The fact that overexpression of ATF-2 and c-Jun in the
presence of EBNA2 has a pronounced activating effect on the LMP1
promoter (Fig. 7B) strongly argues against such a hypothesis. With
regard to the first alternative, we have not been able to detect any
change in the phosphorylation status or the levels of ATF-2 and c-Jun
in parallel with the EBNA2-induced activation of the LMP1 promoter
(Fig. 8). In addition, it has been demonstrated in several studies that
the C-terminal acidic domain of EBNA2 is required for transcriptional
transactivation by EBNA2 (10, 11, 56), and the activating
domain of EBNA2 has been found to make physical contact with several
general transcription factors, including TFIIB, TAF40, and TFIIH
(59, 61). Thus, it seems quite likely that EBNA2, at least
in the context of the
106/+40 part of LRS, functions in a manner
analogous, in several respects, to the transcriptional coactivators CBP
(CREB-binding protein) and the adenovirus E1A-associated cellular
protein p300 with regard to the ATF/CRE. Neither CBP nor p300 by itself
binds to DNA, but they can be recruited to promoter elements by
interaction with a multitude of sequence-specific activators. These
interactions include CBP-CREB (9, 39), p300-CREB
(3), CBP-c-Jun (4), p300-YY1 (41),
CBP-Fos (5), CBP-c-Myb (14), and CBP-nuclear receptors (34). CBP can activate transcription through a
glutamine-rich region in the C-terminal part of the protein, and the
activation domain has been shown to interact with components of the
basal transcription machinery (39). Thus, CBP and p300 are
transcriptional coactivators that provide a crucial link between
transcriptional activators stimulated by signalling cascades and
initiation of transcription. EBNA2 seems to function through a similar
mechanism.
EBNA2 interacts with several other transcriptional regulatory elements
in the LMP1 promoter. These factors include the RBP-J
(26, 31,
43, 62, 72), the Ets-related PU.1 factor (33), and an
unidentified member of the POU domain-containing protein family
(55). RBP-J
is a transcriptional repressor which binds to
DNA sequences (GTGGGAA) in LRS. It has been shown that EBNA2 can act by targeting DNA-bound RBP-J
within the nucleus and
abolishing RBP-J
-mediated repression through masking of the
repression domain (26, 31, 32, 43, 62, 72). Furthermore,
EBNA2 interactions with PU.1 and the POU domain protein seem to be
essential for the efficient upregulation of the LMP1 promoter, and the
elements might act in a cooperative manner (33, 55). The
number of EBNA2 molecules bound to the LMP1 promoter in its activated
configuration is not known. However, in a simplistic model, Johannsen
et al. (33) have suggested that one EBNA2 molecule
(presumably as a dimer) binds to the regulatory region via multiple
protein-protein interactions with a number of transcriptional
activators including PU.1, LBF3, LBF5, LBF6, LBF7, and RBP-J
. In the
light of our investigations, we would suggest that the c-Jun/ATF-2
heterodimer and the POU domain protein should also be included. The
biochemical function of these multiple contact points would then be to
increase the stability of the promoter-EBNA2 complex and hence the
specificity and efficiency of the induction. Functional studies are
consistent with the notion that some of the activators surrounding the
PU.1-binding site cooperate with PU.1 in the binding of the same EBNA2
dimer (33, 40, 55). Independent binding of separate EBNA2
molecules to multiple sites in vivo through different factors including RBP-J
, LBF3, LBF5, LBF6, LBF7, PU.1, the POU domain protein, and the
c-Jun/ATF-2 heterodimer is, however, also possible, although we have no
data to support such an assumption. It has recently been demonstrated
in a model system that multiple EBV ZEBRA molecules bound upstream of
the TATA box and initiation site synergistically interact with TFIID
and TFIIA, resulting in the assembly of a preinitiation
subcomplex (the DA complex) and a concomitant isomerization (8). Once isomerized, the complex binds TFIIB and the
remaining general factors. Interestingly, the recruitment of the DA
complex required multiple contacts and is therefore the basis for
transcriptional synergy in the system. Recruitment and isomerization of
the DA complex may be a general effect of many activators and
coactivators, including EBNA2.
 |
ACKNOWLEDGMENTS |
We gratefully acknowledge Carina Ström and Jane
Löfvenmark for skillful technical assistance. We thank G. Suske
for the generous gift of the pCMV-Sp1 plasmid, C. Svensson-Akusjärvi for the ATF-2 cDNA and the E1A 13S expression
vector, R. Tjian for the pCMV c-jun plasmid, R. H. Goodman for the pET-15b(ATF-1) and pET-15b(CREB 341) plasmids, and
E. Lundgren for the pE300CY6 plasmid.
This study was supported by grants from the Swedish Medical Research
Council, the Swedish Cancer Society, and the Sahlgrenska University
Hospital.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Clinical Chemistry and Transfusion Medicine, Sahlgrenska University
Hospital, S-413 45 Gothenburg, Sweden. Phone: 46-31-603054. Fax:
46-31-828458. E-mail: anna.sjoblom{at}ss.gu.se.
 |
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