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J Virol, February 1998, p. 1013-1019, Vol. 72, No. 2
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Functional Interaction of the Bovine Papillomavirus
E2 Transactivation Domain with TFIIB
Jun-Mei
Yao,1
David E.
Breiding,1 and
Elliot J.
Androphy1,2,*
Department of Dermatology, New England
Medical Center and Tufts University School of
Medicine,1 and
Department of Molecular
Biology and Microbiology, Tufts University School of
Medicine,2 Boston, Massachusetts 02111
Received 13 August 1997/Accepted 5 November 1997
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ABSTRACT |
Induction of gene expression by the papillomavirus E2 protein
requires its ~220-amino-acid amino-terminal transactivation domain
(TAD) to interact with cellular factors that lead to formation of an
activated RNA polymerase complex. These interaction partners have yet
to be identified and characterized. The E2 protein localizes the
transcription complex to the target promoter through its
carboxy-terminal sequence-specific DNA binding domain. This domain has
been reported to bind the basal transcription factors TATA-binding
protein and TFIIB. We present evidence establishing a direct
interaction between amino acids 74 to 134 of the E2 TAD and TFIIB.
Within this region, the E2 point mutant N127Y was partially defective
and W99C was completely defective for TFIIB binding in vitro, and these
mutants displayed reduced or no transcriptional activity, respectively, upon transfection into C33A cells. Overexpression of TFIIB specifically restored transactivation by N127Y to close to wild-type levels, while
W99C remained inactive. To further demonstrate the functional interaction of TFIIB with the wild-type E2 TAD, this region was fused
to a bacterial DNA binding domain (LexA:E2:1-216). Upon transfection
with increasing amounts of LexA:E2:1-216, there was reduction of its
transcriptional activity, a phenomenon thought to result from titration
of limiting factors, or squelching. Squelching of LexA:E2:1-216, or the
wild-type E2 activator, was partially relieved by overexpression of
TFIIB. We conclude that a specific region of the E2 TAD functionally
interacts with TFIIB.
 |
INTRODUCTION |
The papillomavirus E2 proteins
regulate viral transcription and replication (1, 4, 8, 18, 21,
50). The bovine papillomavirus type 1 (BPV-1) E2 gene product has
been most widely studied, and because there is moderately strong
homology among all animal papillomavirus E2 proteins, it is likely that
they share important properties and characteristics. The 410-amino-acid (aa) BPV E2 protein contains modular domains (19). The
C-terminal 125 aa of BPV-1 E2 serve as the DNA binding and dimerization
domain (18, 19, 26, 32, 33). This C-terminal region has been shown to interact with TATA-binding protein (TBP) and TFIIB
(34). However, the E2 transactivation domain (TAD) can
stimulate transcription in eukaryotic cells when cloned onto a
heterologous DNA binding domain (DBD) (9, 25, 46).
The N-terminal ~220-aa transcriptional activation domain was
predicted by computer algorithms to form two putative acidic amphipathic helices followed by a hydrophobic beta sheet. Mutations in
each of these motifs render E2 inactive for transcriptional activation
(1, 8, 18). Our goal is to identify the network of
connections formed between E2 and cellular proteins, and we have
isolated a novel cellular protein that functionally interacts with
BPV-1 E2 and mapped its binding to the hydrophobic region of the TAD
(9). Interactions between enhancer-activating proteins such
as E2 and cellular factors have been demonstrated for other activators.
One of the best-studied models is the small (~80 aa) and potent
strong TAD of the herpes virus VP16 gene product (29). The
VP16 TAD has been shown to bind to TFIIB, TBP, dTAF40, ADA2, and the
p62 subunit of TFIIH (5, 13, 20, 41, 48).
The general transcription factor IIB (TFIIB) is an essential component
of the RNA polymerase II transcription apparatus. The complex of TFIIB
with TBP at a promoter represents the minimal requirement for formation
of the preinitiation complex but is not sufficient for activation of
gene expression. Transcriptional activators, including viral activation
domains such as VP16 (29), EBNA-2 of Epstein-Barr virus
(30), and large T antigen of simian virus (27),
bind TFIIB directly. This interaction is thought to catalyze the
assembly to the preinitiation complex. The TFIIB interaction with
activators may also stimulate mRNA elongation by the RNA polymerase
II-associated complex (7, 47, 49).
In this report, we present in vitro and in vivo results that
demonstrate that TFIIB binds and functionally cooperates with BPV-1 E2
to stimulate transcription. Their association is mediated by two
distinct regions of E2. As reported previously by Rank and Lambert
(34), the E2 C-terminal DBD binds TFIIB. In addition, a
region within the E2 activation domain encompassing aa 74 to 134 specifically and directly binds TFIIB. Our results indicate that the
interaction of TFIIB with the E2 TAD is necessary for transcriptional
activation.
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MATERIALS AND METHODS |
Plasmids.
The glutathione S-transferase (GST)
fusion plasmid pGEXN:TFIIB was constructed by subcloning the TFIIB cDNA
from pFIIB-11d, kindly provided by C.-M. Chiang and R. G. Roeder
(12). GST:TFIIB deletion mutants were kindly supplied by D. Reinberg (23). For mammalian cell expression, TFIIB was
transferred into pcDNA3 and pCG vectors. Wild-type and mutant pCG E2
expression vectors have been previously described (8, 21).
The pGEX2T:E2:1-134 wild-type and mutant vectors were constructed by
cleavage of pGEX2T:E2:1-286 (9) by digestion with
AccI and KpnI followed by Klenow polymerase treatment. The following GST-E2 fusions were generated by cloning PCR
fragments into pGEX2T: pGEX2T:E2:1-98, pGEX2T:E2:54-134,
pGEX2T:E2:15-91, pGEX2T:E2:15-134, pGEX2T:E2:74-134,
pGEX2T:E2:91-134, and pGEX2T:E2:74-113. The E2:113-286 insert was
cleaved from pUC19: NarbE2 (8) with BamHI and
EcoRI and inserted into pGEX2T cleaved with the same enzymes. pGEX2T:E2:113-134 was derived from pGEX2T:E2:113-286 by
digestion with AccI and KpnI followed by Klenow
polymerase treatment. pGEX2T:E2:215-410 was made by transferring the
insert encoding these amino acids from YEplac112G:E2:215-410
(8) to pGEX2T. To make six-histidine-tagged E2:1-216,
oligonucleotides encoding a six-histidine motif were placed in frame 5'
to E2:1-216 in pET8C. The pcDNA3:LexA202B and pcDNA3:LexA:E2:1-126
constructs and pDBL8 reporter (9), the negative control
GST:SD21-HC8 subunit gene of human proteasome (11), and
luciferase reporter plasmid pJSLuc (40) will be described
separately. The pcDNA3:LexA:E2:1-133 and 162-410 constructs were made
by transferring the LexA:E2 fusion from the analogous yeast expression
vector (8) as HindIII/SpeI fragments to HindIII/XbaI-cleaved pcDNA3
plasmid. pcDNA3:LexA:VP16 (VP16 aa 410 to 490) was constructed from the
VP16 activation domain in pSD10 (16) as a
BamHI/XbaI fragment into pcDNA:LexA202B.
Protein expression and binding assays.
GST, GST:VP16,
GST:TFIIB, and E2 fusion proteins were expressed in pLysS from pGEX
plasmids (Pharmacia). Fifty milliliters of cells was grown to an
optical density of 0.6 to 0.9 at 600 nm, induced with 0.5 mM
isopropyl-
-D-thiogalactopyranoside (IPTG) for 2.5 h, pelleted, washed, and frozen. Cell pellets were resuspended in 2 ml
of NETN (100 mM NaCl, 0.1 mM EDTA, 20 mM Tris-HCl [pH 8.0], and 0.1%
Nonidet P-40) with 1 mM phenylmethylsulfonyl fluoride (PMSF). Cells
were disrupted by sonication on ice, and insoluble material was removed
by centrifugation at 15,000 × g. E2 C-terminal (aa 215 to 410) GST fusion proteins were soluble at these conditions and were
collected with glutathione-agarose beads added directly to the
supernatant. Most N-terminal (aa 1 to 216) E2 fusion proteins were not
soluble under these conditions. To purify these proteins, pellets were
solubilized in 1 ml of 8 M urea. After sonication, Triton X-100 was
added to 1%, and this fraction was diluted with 30 ml of NETN. After
removal of debris by centrifugation at 15,000 × g, the
solubilized GST:E2 fusion proteins were collected by addition of 0.25 ml of glutathione-agarose beads. After being washed with NETN, beads
were resuspended in NETN with the protease inhibitors PMSF, leupeptin,
and pepstatin. FLAG-tagged TFIIB was prepared from Escherichia
coli and purified according to the method of Chiang and Roeder
(12). In vitro-synthesized proteins were produced and
radiolabeled with Sp6 or T7-based rabbit reticulocyte lysate-coupled
transcription-translation kits (Promega). Concentrations of unlabeled
proteins were measured with the bicinchoninic acid protein assay kit
(Pierce).
For binding reactions, 2.5 µg of purified GST or GST fusion proteins
was incubated with in vitro-translated 35S-labeled protein
in 100 µl of IP buffer (Tris-HCl buffer at pH 7.9, 100 mM NaCl, 1%
Nonidet P-40, 1 mM PMSF, and 1 mM dithiothreitol) (42) at
4°C for 1 h. The beads were washed three times in IP buffer
containing 100 mM KCl and then in IP buffer containing 500 mM KCl three
times. The bound proteins were analyzed by sodium dodecyl sulfate
(SDS)-polyacrylamide gel electrophoresis (PAGE) and quantified by a
PhosphorImager (Bio-Rad).
GST or GST fusion proteins were purified from bacteria and used in
protein-protein interaction assays under the conditions described
above. Bound proteins were separated by SDS-PAGE and transferred to a
nitrocellulose membrane. The filter was blocked with 5% milk in TBS-T
buffer (10 mM Tris, 150 mM NaCl, 0.05% Tween 20); incubated either
with an anti-TFIIB (43), an anti-FLAG (IBI), or an anti-E2
(33) antibody; and subsequently reacted with a secondary
antibody conjugated with peroxidase. Immunoblots were developed by
enhanced chemiluminescence (ECL) as described by the manufacturer
(Amersham).
Cell transfection and transcriptional activation assay.
Human C33A cells were plated at 106 cells per 60-mm dish 1 day prior to calcium phosphate-mediated transfection (10).
Vector DNA was added to each transfection to normalize the total amount of expression vector. Each transfection included 1 µg of the
luciferase reporter plasmid pJSLuc containing three E2 binding sites or
pDBL8 with eight LexA binding sites. Cell extracts were harvested
48 h later with reporter lysate buffer (Promega). The luciferase activity in a 5-µl sample of lysate was determined by adding 25 µl
of luciferase assay reagent as measured in a luminometer (Lumat LB9501;
Berthod). The basal luciferase activity obtained with the reporter
plasmid and expression vector without insert (pcDNA3 or pCG) was set to
1.0. Transfections were conducted in triplicate, and the indicated
values are averaged from at least three independent experiments.
 |
RESULTS |
Two distinct regions of E2 bind TFIIB in vitro.
Initially, we
sought to determine whether human TFIIB can specifically bind BPV-1 E2
in vitro. GST:TFIIB was expressed in E. coli, purified with
glutathione-agarose beads, and incubated with in vitro-translated
[35S]methionine-labeled full-length E2. Plasmids encoding
the E2 TAD (aa 1 to 216), the C-terminal repressor of E2 (aa 162 to
410), or luciferase were also translated and reacted with GST:TFIIB (Fig. 1A). Approximately 10% of the
input 35S-labeled wild-type E2 (lane 2) bound to GST:TFIIB.
No binding was observed with the luciferase-negative control (lane 1).
GST:TFIIB complexed with both E2:1-216 (lane 3) and E2:162-410 (lane 4) (6 and 3% of input, respectively). It has previously been reported that the C-terminal DBD spanning aa 310 to 410 bound TFIIB in vitro
(34), and while this was likely to explain the interaction with E2:162-410, association with the E2 TAD has not been previously demonstrated. In comparison to the N terminus of E2, GST:TFIIB weakly
bound an in vitro-translated carboxy-terminal 125 aa which include the
DBD (data not shown). GST:TFIIB also bound the full-length E2 proteins
from human papillomavirus types 11, 16, and 18, consistent with this
representing a conserved function (data not shown).

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FIG. 1.
E2 interacts with immobilized TFIIB in vitro. (A)
GST:TFIIB immobilized on glutathione beads was incubated with in
vitro-translated 35S-labeled proteins. Bound proteins were
visualized and quantitated by a PhosphorImager. GST:TFIIB retained
~10% of full-length E2 (lane 2), 6% of E2:1-216 (lane 3), and 3%
of E2:162-410 (lane 4). No binding was observed between luciferase and
GST:TFIIB (lane 1). (B) Binding of six-histidine-tagged E2:1-216 to
GST:TFIIB deletion mutants. Wild-type GST:TFIIB and deletion mutants
were incubated with 0.5 ml of crude cell extract of
six-histidine-tagged E2:1-216 expressed in E. coli. Bound
proteins were analyzed by SDS-PAGE and visualized by Western blotting
with anti-E2 monoclonal antibody B201. E2:1-216 bound to wild-type
GST:TFIIB (lane 2), 202-269 (lane 7), and 238-316 (lane 8) but
not to GST alone (lane 1), the negative control GST:SD21-HC8 subunit
gene of human proteasome (lane 9), and four other GST:TFIIB deletion
mutants: 4-85, 45-123, 118-174, and 178-210 (lanes 3 to 6, respectively).
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To confirm the direct association of this E2 domain with human TFIIB, a
six-histidine-tagged E2:1-216 was expressed in
E. coli and
binding experiments were performed with crude cell extract.
GST:TFIIB
bound this form of the E2 TAD after several washes with
0.5 M NaCl
(Fig.
1B). This result implies that the interaction
between the
N-terminal E2 TAD and TFIIB is not mediated by eukaryotic
factors
present in reticulocyte lysate. To localize the domain(s)
of TFIIB
important for interaction with the N terminus of E2,
several deletion
mutants were tested (
23). As shown in Fig.
1B, C-terminal
deletions of TFIIB such as

202-269 and

238-316
retained the
ability to bind E2:1-216. Binding was greatly reduced
with the
N-terminal deletion TFIIB mutants

4-85,

45-123,

118-174,
and

178-201.
A series of in-frame E2 deletions were synthesized as GST fusion
proteins to define the limits of the TFIIB binding domain(s)
within the
TAD (Fig.
2A). These proteins were
captured on glutathione
beads and reacted with epitope-tagged (FLAG)
TFIIB purified from
E. coli. GST itself did not bind
FLAG-TFIIB (Fig.
2B). GST:E2:1-91
(lane 3), 54-134 (lane 7), and 74-134 (lane 9) bound TFIIB, but
GST:E2:1-54 (lane 2), 15-91 (lane 4), 15-134 (lane 5), 54-91 (lane
6), 74-91 (lane 8), and 91-134 (lane 10) did not.
These results
indicate that the central region of the E2 TAD, including
aa 74
to 134, is necessary for TFIIB binding to the E2 TAD. The aa 54
to 134 showed more efficient association, but E2:15-134 did not
interact with TFIIB. Similarly, E2:1-91 effectively bound TFIIB
but
15-91 did not. The simplest interpretation of these results
is that E2
proteins lacking the first 15 aa may be significantly
misfolded and
hence unable to bind. The functional importance
of the first 15 aa has
been demonstrated in our laboratory (
8)
and by others
(
32). TFIIB binding by GST:E2:1-91 and GST:E2:74-134
suggests that aa 74 to 91, shared by these two proteins, form
the core
TFIIB interaction region. To further delineate the TFIIB-binding
peptide, GST:E2 fusions including aa 1 to 54, 54 to 91, 74 to
91, 74 to
113 (data not shown), 91 to 134, or 113 to 134 (data
not shown) were
tested and found to be unable to bind purified
TFIIB (Fig.
2B). These
data imply that E2 aa 74 to 91 are not
sufficient for TFIIB association
and that surrounding residues
influence their activity. The additional
amino acids outside of
the core 74-to-91 region may contribute directly
to TFIIB binding
or may mediate proper folding or stabilization of
GST:E2 proteins.

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FIG. 2.
The N-terminal activation domain of E2 interacts with
TFIIB. (A) Coomassie blue-stained polyacrylamide gel of representative
GST:E2 fusion proteins used in the experiments: GST (lane 1),
GST:E2:74-134 (lane 2), GST:E2:54-134 (lane 3), GST:E2:1-91 (lane 4),
and GST:E2:1-134 (lane 5). (B) Affinity chromatography with purified
FLAG-TFIIB and GST:E2 directly demonstrates binding. Truncated forms of
BPV-1 E2 were expressed and purified from E. coli (pLysS) as
GST fusion proteins. FLAG-TFIIB was purified from E. coli
(pLysS) with FLAG-tagged M2 beads eluted with FLAG peptides. Bound
FLAG-TFIIB was detected with FLAG antibody and ECL. GST:E2:1-91 (lane
3), GST:E2:54-134 (lane 7), and GST:E2:74-134 (lane 9) bound
FLAG-TFIIB, but GST (lane 1), GST:E2:1-54 (lane 2), GST:E2:15-91 (lane
4), GST:E2:15-134 (lane 5), GST:E2:54-91 (lane 6), GST:E2:74-91 (lane
8), and GST:E2:91-134 (lane 10) showed no interaction with TFIIB. (C)
Specific binding of TFIIB to the E2 TAD. 35S-labeled TFIIB
or luciferase was synthesized in reticulocyte lysates and incubated
with GST (lanes 1 and 2), GST:E2:54-134 (lanes 3 and 4), GST:E2:113-286
(lanes 5 and 6), GST:E2:215-410 (lanes 7 and 8), or GST:E2:74-134
(lanes 9 and 10). GST:E2:54-134 retained 26% (lane 3) and
GST:E2:74-134 retained 9% (lane 9) of input TFIIB. (D) Summary of the
E2 regions tested for binding to FLAG-TFIIB.
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In some experiments, we used reticulocyte lysate-translated TFIIB or
luciferase as a negative control to confirm the specificity
of TFIIB
association with this region of E2 (Fig.
2C). The TFIIB
protein bound
to both GST:E2:54-134 and 74-134 (26 and 9% of input,
respectively;
lanes 3 and 9, respectively), but luciferase did
not (lanes 4 and 10).
GST:E2:113-286 (lanes 5 and 6) and GST:E2:215-410
(lanes 7 and 8) did
not bind either TFIIB or luciferase. We were
unable to reproducibly
detect association of GST:E2:215-410 with
in vitro-translated TFIIB
(lane 7) or with purified FLAG-TFIIB.
The results of all TFIIB binding
experiments are summarized in
Fig.
2D.
E2 TAD mutants with reduced binding to TFIIB are functionally
defective in vivo.
We have previously characterized a large series
of both transactivation-competent and -defective mutations throughout
the E2 TAD (8). GST:E2 proteins carrying these mutations
were tested for their ability to associate with TFIIB in vitro (Fig. 3A
to D). Recombinant GST:E2 proteins were
synthesized in E. coli as GST:E2:1-134 or GST:E2:1-286
fusions (Fig. 3A), purified, and immobilized on
glutathione-Sepharose beads. In vitro-translated or purified
FLAG-TFIIB was used in the association reactions, and results are shown
in Fig. 3B to D. Notably, GST:E2:1-134:W99C (Fig. 3B), having one of
four transactivation-defective mutations within the first 134 aa
tested, did not bind TFIIB. The other three mutants tested, W92R, F87S,
and Q15H, interacted with TFIIB as efficiently as did wild-type GST:E2.
Five other transactivation-defective E2 mutants, Q66R, S93P, E105G,
P106S, and W130R (Fig. 3C and D), showed approximately wild-type levels
of binding to TFIIB. One mutant that has ~50% of wild-type
transcriptional activation, N127Y, displayed a comparable reduction in
ability to bind in vitro-translated (Fig. 3C) or purified (Fig. 3D)
FLAG-TFIIB.

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FIG. 3.
E2 TAD mutants with reduced binding to TFIIB in vitro
are also defective for TFIIB interaction in vivo. Recombinant GST:E2
fusion proteins were synthesized in E. coli, purified, and
immobilized on glutathione-Sepharose beads. FLAG-TFIIB was used in
panels B and D, and in vitro-translated TFIIB was used in panel C. ECL
Western blotting with anti-FLAG antibody was used to detect captured
FLAG-TFIIB as described in Materials and Methods. (A) Coomassie
brilliant blue-stained GST fusion proteins in the GST:E2:1-286 form
used in panels C and D: Q66R (lane 1), S93P (lane 2), E105G (lane 3),
P106S (lane 4), N127Y (lane 5), W130R (lane 6), GST (lane 7), and wild
type (lane 8). (B) FLAG-TFIIB binding to E2 mutants (in GST:E2:1-134
form) and other fragments: GST (lane 1), GST:E2:74-216 (lane 2),
GST:E2:1-134 (lane 3), GST:E2:1-98 (lane 4), GST:E2:1-134W92R (lane 5),
GST:E2:1-134F87S (lane 6), GST:E2:1-134Q15H (lane 7), GST:E2:1-134W99C
(lane 8), GST:E2:215-286 (lane 9), GST:E2:215-410 (lane 10), and 10%
input FLAG-TFIIB (lane 11). (C) In vitro-translated TFIIB binding to
GST (lane 1), the negative control GST:SD21-HC8 subunit gene of human
proteasome (lane 2), and the following point mutants in the
GST:E2:1-286 form: Q66R (lane 3), S93P (lane 4), E105G (lane 5), P106S
(lane 6), N127Y (lane 7), W130R (lane 8), and wild type (lane 9). (D)
FLAG-TFIIB binding to GST:E2 mutants (GST [lane 1], GST:SD21 [lane
2], GST:E2:1-286 wild type [lane 3], and GST:E2:1-134 wild type
[lane 4]) and GST:E2:1-286 form mutants (Q66R [lane 5], S93P [lane
6], E105G [lane 7], P106S [lane 8], N127Y [lane 9], W130R [lane
10], and 10% input FLAG-TFIIB [lane 11]). (E) TFIIB interacts with
E2 in vivo. C33A cells were transfected with the luciferase reporter
pJSLuc (three E2 binding sites) and increasing amounts of pCG:E2 wild
type (wt), pCG:E2W99C, pCG:E2N127Y, and pCG:E2S181F, with or without 2 µg of pCG:TFIIB. The amount of DNA in each transfection was adjusted
with the empty expression vector pCG to a total of 5 µg. The
luciferase activities of reporter in the absence of E2 were normalized
to 1.
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We questioned whether overexpression of TFIIB would reverse the
transcription defect of N127Y (Fig.
3E). Cotransfection of
E2 N127Y
with pCG:TFIIB resulted in recovery of E2-dependent transactivation
to
nearly wild-type levels. In contrast, the TFIIB binding-defective
E2
mutant W99C remained inactive with overexpression of TFIIB.
The
inability of W99C to activate transcription even when cotransfected
with TFIIB is not likely due to complete misfolding or low expression
levels because it is functional in E1-dependent viral replication
(
21). As a control, we used S181F, a partially defective
transactivation
mutant that is outside the TFIIB association domain and
is fully
active for TFIIB binding (data not shown). Transactivation by
E2 S181F was unchanged upon cotransfection with 2 µg of pCG:TFIIB.
pCG:TFIIB alone showed no effect in the absence of any E2 (data
not
shown). Western blot analysis of cell lysates from these cotransfection
experiments showed no differences in E2 protein levels in the
presence
or absence of TFIIB. All mutants were observed to be
nuclear by
immunofluorescence (data not shown).
In vivo interaction of TFIIB with the N-terminal E2 TAD.
Our
studies demonstrated that aa 74 to 134 within the E2 TAD directly bind
TFIIB, and the genetic studies described above suggested that this
interaction is necessary for E2 activity. To further study the
functional significance of interaction between TFIIB and the TAD,
E2:1-133, 1-216, and 162-410 were placed in frame C-terminal to the
LexA DBD (202-aa form). These fusions eliminate a potential
contribution of the E2 C-terminal DBD and its interactions with TBP and
TFIIB. These constructs were transfected along with a LexA-dependent
reporter into C33A cells. LexA:E2:1-216 stimulated luciferase
expression from the LexA reporter almost 13-fold, but LexA:202B,
E2:1-133, and E2:162-410 reduced transcription by 40% in comparison
with vector alone (Fig. 4A). These
experiments confirm that the N-terminal 216 aa of E2 are necessary and
sufficient for transcriptional activation. Furthermore, the N-terminal
133 aa which include the minimal E2 domain required for association with TFIIB (aa 74 to 134) were unable to stimulate transcription. This
is consistent with the fact that aa 133 to 216 are also necessary for
E2 function.

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FIG. 4.
TFIIB functionally interacts with the E2 TAD in vivo.
(A) Transactivation by LexA E2 TAD fusions. C33A cells were transfected
with pcDNA3:LexA:E2:1-133 (bar 3), E2:1-216 (bar 4), or E2:162-410 (bar
5) or transfected with control plasmid pcDNA3:LexA (bar 2) without E2
with 1 µg of reporter plasmid. Luciferase activity was normalized to
pcDNA3 (bar 1). (B) Overexpression of TFIIB relieves squelching by the
E2 TAD. Increasing amounts of pcDNA3:LexA:E2:1-216 (0.1, 1, and 2 µg)
were transfected into C33A cells with 1 µg of the pDBL8 reporter
plasmid, with or without 2 µg of pcDNA3:TFIIB. Vector DNA was added
as necessary to standardize the total amount of expression plasmid in
each reaction.
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Another means to test the interaction between the E2 TAD and TFIIB is
based on the observation that high-level expression
of wild-type E2
results in decreased promoter-specific activation.
This is thought to
result from squelching, in which excess E2
proteins not bound to DNA
sequester factors required for transcriptional
activation. It has been
demonstrated elsewhere that overproduction
of TFIIB reduced this
self-inhibitory effect (
34), and we observed
analogous
findings (Fig.
3E). To exclude the potential contribution
of the TFIIB
interaction with the E2 DBD, increasing quantities
of LexA:E2:1-216
were transfected into C33A cells (Fig.
4B). Two
micrograms of
LexA:E2:1-216 showed less enhancement of transactivation
than did 0.1 µg (3.5- versus 13-fold, respectively), reproducing
this phenomenon.
Cotransfection of TFIIB resulted in increased
transcriptional activity
at high levels of transfected LexA:E2:1-216.
Totals of 0.5 and 1 µg
of TFIIB also reversed squelching but to
a lesser extent (data not
shown).
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DISCUSSION |
The papillomavirus E2 proteins are composed of three domains
(19, 25, 33, 38, 45). The N-terminal ~215 aa of BPV-1 E2
represent its TAD. This is followed by a nonconserved segment called
the hinge. The C-terminal 125 aa form a dimeric
-barrel with two
high-affinity DNA-binding alpha helices that recognize the sequence
ACCGNNNNCGGT (2, 26). To discern how E2 engages the
transcription machinery, we are attempting to catalog the cellular
proteins which interact with the E2 TAD and DBD. These investigations
led us to examine whether the general transcription factor TFIIB binds
E2. TFIIB has been proposed to be one of the key targets for
transcriptional activators. It was reported that the acidic type of
activator binds TFIIB, disrupting N- and C-terminal intramolecular
contacts and exposing binding sites for general transcription factors
and RNA polymerase II (35). Activation domains have been
shown to interact with multiple factors and probably enhance several
steps in the assembly of functional preinitiation complexes. Activators
like herpes simplex virus VP16 strongly stimulate both initiation and
elongation of the nascent transcript by RNA polymerase II (7,
49). VP16 interacts with at least five different factors: TFIIB,
TBP, dTAF40, ADA2, and the p62 subunit of TFIIH (5, 13, 20, 41,
48).
We demonstrate physical and functional interactions between the E2
N-terminal TAD and TFIIB. Affinity chromatography with GST fusions to
the E2 TAD retained purified FLAG-TFIIB, both produced in bacteria.
Thus, this N-terminal E2 association with TFIIB occurs through direct
protein-protein interaction and does not require any other eukaryotic
factors. In vitro binding assays with wild-type and mutant E2 proteins
defined aa 74 to 134 as the core TFIIB binding region. A slightly
larger segment (aa 54 to 134) binds TFIIB more efficiently, indicating
that adjacent amino acids may contribute to their association. Smaller
partially overlapping fragments of E2 such as aa 74 to 91, 74 to 113, 113 to 134, and 54 to 91 cannot complex with TFIIB, although others
including aa 1 to 91 and 1 to 98 bound TFIIB. There are several
interpretations for these data, such as interference from the GST
moiety in close proximity to the core domain or misfolding of the short
E2 moiety. The interaction of TFIIB with the E2 TAD may involve
multiple contacts between amino acids in the 54-to-134 region, and loss of a subset with the small truncations may lead to reduced affinity and
undetectable binding in vitro. None of the constructs that initiated at
methionine codon 15 present in wild-type E2 bound TFIIB, even those
incorporating the core TFIIB binding region (e.g., aa 15 to 91 or 15 to
134). This implies that the first 14 aa of E2TA may be critical for
maintaining the active conformation of the E2 TAD. The importance of
these 14 aa has been established elsewhere (8, 32).
Our results indicate that the E2 TAD interacts with the N-terminal 200 aa of TFIIB. A Gal4-VP16 TAD fusion bound to the C terminus of TFIIB
while the N-terminal region of TFIIB was not required (13,
36). One mechanism suggested is that activators interrupt TFIIB
intramolecular interaction and expose binding sites for general
transcription factors to enter the preinitiation complex through TFIIB
(35), although the importance of VP16-TFIIB interaction has
been questioned by others (22, 37). One group has reported
that the vitamin D receptor interacted with the N-terminal domain of
TFIIB, while apparently contradicting results localized vitamin D
receptor binding to the C-terminal region of TFIIB (6, 31).
In vitro binding and transient transfection assays demonstrated that
the putative zinc finger structure in the N terminus of TFIIB was
necessary for interaction with the GAL4-ftzQ (GAL4 DBD fused to the last 86 aa of the Drosophila homeodomain protein
Fushi tarazu [14]). It seems that both the N and C
termini of TFIIB may interact with an activator.
Our findings confirm previous observations that the C-terminal DBD of
E2 binds TFIIB (34). In the context of the GST:TFIIB fusion
protein, we detected binding to truncated forms of the E2 DBD peptide.
In our experiments, GST:E2:215-410 did not bind in vitro-translated
TFIIB or purified FLAG-TFIIB. This may reflect the fact that the
conditions we used were not optimum for these reactions. The biological
relevance of the E2 DBD binding to TBP and TFIIB in vitro
(34) has not been established. Another study found a
functional interaction between TBP and a larger E2 region that included
both the hinge and DBD, although physical interaction could not be
established (39). The E2 TAD activates transcription when
fused to GAL4 or LexA DBD in yeast and mammalian cells as shown before
(3, 8, 46) or here (Fig. 4B). These observations suggest
that the C-terminal interaction with TFIIB is dispensable for
transcriptional activation in vivo. However, both N- and C-terminal E2
interactions with TFIIB could be important for activation of some
promoters. Evidence for this possibility is the observation that BPV-1
E2 transcriptional repressor (aa 162 to 410) can partially activate the
human papillomavirus type 18 early promoter (17).
We used several in vivo assays of E2 function to underscore the
significance of the interaction between the E2 N-terminal TAD and
TFIIB. The E2 TAD has been reported to stimulate mammalian promoters in
the absence of its DBD, presumably by activating or recruiting proteins
that initiate the transcription process (25). We found that
overexpression of TFIIB stimulated this generalized activation
phenomenon, implying its participation in this DNA-binding-independent
model (data not shown). Some studies suggested that the entry of TFIIB
may be rate limiting for transcriptional initiation and that activators
recruit or stabilize the interaction of TFIIB with the initiation
complex (13, 24, 36). Others suggested that overexpression
of TFIIB did not significantly affect promoter activity (14, 15,
44). Our experience indicated that transfection of TFIIB alone
with an E2-dependent promoter into C33A cells had no significant effect
on its expression. Upon cotransfection with low levels of E2, TFIIB had
also had no detectable effect, suggesting that their interaction is not
rate limiting under these conditions. However, expression of increasing
amounts of E2 in mammalian cells leads to a peak of maximal promoter
activation followed by a gradual decrease. This is believed to result
from competition of E2 not bound to DNA with promoter-bound E2 for a
rate-limiting factor, or squelching. While TBP and TFIIB were shown to
bind the C-terminal DBD of E2 and their overexpression inhibited
squelching, this in vivo assay was performed with the full-length E2
protein (34). In our experiments, TFIIB reversed the
inhibitory effects of high-level expression of both E2TA and LexA:E2:1-216. This strongly suggests that TFIIB is being titrated by
the E2 TAD. However, even at elevated concentrations of TFIIB in the
transfected cells, transactivation did not achieve levels greater than
the peak observed with lower-input E2. This implies that another
cellular protein(s) is limiting in addition to TFIIB.
The experiments presented here imply that TFIIB plays an important role
in transcriptional activation mediated by the papillomavirus E2
protein. The single-amino-acid mutant E2 W99C lacks the ability to bind
TFIIB in vitro (Fig. 3B) and correspondingly fails to activate
transcription in vivo. Cotransfection of TFIIB with E2 W99C was unable
to restore transcriptional activation. While this tryptophan may be
essential for the proper conformation of the TAD and, more
specifically, the TFIIB binding domain, E2 W99C retains the ability to
bind E1 and shows synergistic stimulation of DNA replication, although
not to wild-type levels. This finding implies that its activation
domain is not uniformly denatured and suggests that TFIIB binding by
the E2 TAD is not required for E2 activation of E1-dependent DNA
replication. Notably, the mutant E2 N127Y displayed reduced affinity
for TFIIB compared to wild type and other mutants. Overexpression of
TFIIB led to a dramatic gain of transactivation by the N127Y mutant to
near-wild-type levels. Another E2 mutant, S181F, similarly has a
partial transactivation defect but is outside the core TFIIB binding
region and is fully competent for TFIIB binding. In contrast to N127Y,
no effect was observed when S181F was cotransfected with TFIIB into
C33A cells. These studies demonstrate that the reduced affinity of E2
N127Y for TFIIB can be functionally complemented by elevated TFIIB
protein levels. The S181F mutant is likely to be defective for another interaction necessary for transactivation, and this cannot be replaced
by overexpression of TFIIB. While we cannot formally exclude the
possibility that N127Y affects interaction with another cellular
factor, these studies suggest that E2 mediates at least some of its
effects through TFIIB in vivo by recruiting and /or stabilizing TFIIB
in the transcription initiation complex.
Transcriptional activation is believed to include a complex and highly
organized series of events, and we assume that the relatively large E2
TAD serves as a platform for multiple protein-protein interactions. At
least three cellular proteins, Sp1, TBP, and TFIIB, have been reported
to bind E2 (28, 34, 39). Using the yeast two-hybrid system,
we have identified and characterized a novel human factor, AMF-1, that
interacts with the E2 TAD (9). The TFIIB binding core domain
is located between aa 74 and 134. AMF-1 interacts with the TAD region
defined by residues 133 to 216 of E2. LexA:E2:1-133 contains the TFIIB
binding domain and yet cannot activate transcription, suggesting that
E2 must interact with other cellular factors, such as AMF-1, to
activate transcription. In summary, we conclude that the papillomavirus
E2 TAD binds specifically and directly to TFIIB and that this
interaction is necessary for transcriptional activation.
 |
ACKNOWLEDGMENTS |
We thank C.-M. Chiang, R. G. Roeder, D. Reinberg, J. Strasswimmer, J. Chen, and N. E. Thompson for plasmids and
antibody. We are also grateful to F. Sverdrup, J. Strasswimmer, and
other E. Androphy laboratory members for helpful discussions.
This work was supported in part by a Dermatology Foundation Research
Fellowship to J.-M.Y. and grant RO1 CA58376 to E.J.A.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Dermatology, New England Medical Center Box 166, 750 Washington St., Boston, MA 02111. Phone: (617) 636-1493. Fax: (617) 636-6190. E-mail:
eandroph{at}opal.tufts.edu.
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J Virol, February 1998, p. 1013-1019, Vol. 72, No. 2
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