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Journal of Virology, November 1998, p. 9101-9108, Vol. 72, No. 11
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Role of Variable Regions A and B in Receptor Binding Domain of
Amphotropic Murine Leukemia Virus Envelope Protein
Jin-Young
Han,
Yi
Zhao,
W. French
Anderson, and
Paula M.
Cannon*
Gene Therapy Laboratories, Norris Cancer
Center and Department of Biochemistry and Molecular Biology,
University of Southern California School of Medicine, Los Angeles,
California 90033
Received 8 May 1998/Accepted 4 August 1998
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ABSTRACT |
For the amphotropic murine leukemia virus (MuLV), a 208-amino-acid
amino-terminal fragment of the surface unit (SU) of the envelope
glycoprotein is sufficient to bind to its receptor, Pit2. Within this
binding domain, two hypervariable regions, VRA and VRB, have been
proposed to be important for receptor recognition. In order to
specifically locate residues that are important for the interaction
with Pit2, we generated a number of site-specific mutations in both
VRA and VRB and analyzed the resulting envelope proteins when expressed
on retroviral vectors. Concurrently, we substituted portions of the
amphotropic SU with homologous regions from the polytropic MuLV
envelope protein. The amphotropic SU was unaffected by most of the
point mutations we introduced. In addition, the deletion of eight
residues in a region of VRA that was previously suggested to be
essential for Pit2 utilization only decreased titer on NIH 3T3 cells by
1 order of magnitude. Although the replacement of the
amino-terminal two-thirds of VRA with the polytropic sequence abolished
receptor binding, smaller nonoverlapping substitutions did not affect
the function of the protein. We were not able to identify a
single critical receptor contact point within VRA, and we suggest
that the amphotropic receptor binding domain probably makes
multiple contacts with the receptor and that the loss of some of these
contacts can be tolerated.
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INTRODUCTION |
The entry of murine leukemia virus
(MuLV) into cells is initiated by an interaction between the envelope
glycoprotein and the host cell receptor. The envelope glycoprotein is
comprised of two polypeptides, the surface unit (SU) and the
transmembrane protein (TM), which are processed from a polyprotein
precursor by a host cell protease during transport to the cell
surface and remain associated after cleavage (13).
Five MuLV subgroups that bind to different cell surface receptors
have been identified: ecotropic, amphotropic, polytropic,
xenotropic, and 10A1 (29, 30, 34). Another murine
retrovirus, Mus dunni endogenous virus, has recently been
described, but it is as yet unclear whether this virus belongs in the
MuLVs (6, 20).
Previous studies have demonstrated that specific receptor recognition
by the different MuLV subgroups is a property of the amino-terminal
domain of SU (2, 4, 5, 11, 22, 23, 25). This region contains
several conserved cysteine residues that have been suggested to
form hydrophilic, disulfide-linked loops (16), and
such a structure has now been confirmed for the ecotropic MuLV SU
(8). Within the amino-terminal region are two stretches of
sequence, designated VRA and VRB, that vary among the different
MuLV subgroups and are therefore likely to contain the residues
involved in specific receptor interactions (4).
The VRA regions can be further subdivided into three sections, comprised of an initial variable disulfide-linked loop(s) (residues 52 to 67), a more conserved interloop domain (residues 68 to 83), and a
second variable disulfide-linked loop (residues 84 to 92), which has
also been referred to as VRC (8). The VRB regions of all
MuLVs contain two cysteine residues, which are predicted to form a
single disulfide-linked loop (16). In addition, the amphotropic and 10A1 envelope proteins contain two more cysteine residues at the amino terminus of VRB that could form an additional small loop. Previous studies have localized residues involved in
receptor interaction primarily within VRA (1, 10, 17-19, 24, 33,
37), although residues in VRB and sequences downstream of the
amino-terminal domain may also influence receptor recognition (2,
10, 23).
The receptor for amphotropic MuLV has been identified as the
phosphate symporter, Pit2 (14, 15, 21, 38-40). A
208-amino-acid amino-terminal fragment of amphotropic SU is
capable of binding to Pit2. This domain is sufficient to bind
to various cell lines susceptible to infection by amphotropic MuLV
and can inhibit binding by viral particles bearing amphotropic envelope
proteins (2). Within this domain, the Pit2 binding
determinants have been suggested to reside in VRA. Retroviruses bearing
amphotropic envelope proteins for which the VRB regions of either
polytropic or xenotropic envelope proteins have been substituted
retained the amphotropic interference pattern (4), and
replacements of either the amino-terminal or carboxy-terminal half of
VRB with a foreign linear epitope still allowed the infection of murine
and human cells expressing Pit2 (3). However, these
substitutions in VRB did have some effect on the host range, as they
prevented infection of D17 cells in both cases (3, 4). In
contrast, the replacement of residues 52 to 66 (residues 50 to 64 in
Battini et al. [3]) in VRA with the same foreign
linear epitope disrupted the ability of the envelope protein to
interact with Pit2. Furthermore, studies analyzing the interactions of
chimeric envelope proteins of amphotropic MuLV and feline leukemia
virus type B with chimeric Pit1 and Pit2 receptors identified the VRA
residues Tyr-62 and Val-63 (Tyr-60 and Val-61 in Tailor and Kabat
[37]) as being critical for amphotropic recognition
of Pit2. Taken together, these data suggest that residues in the
first disulfide-linked loop of VRA are essential for Pit2 recognition.
We sought to determine whether less dramatic changes in the wild-type
amphotropic SU would similarly affect Pit2 recognition. We generated a
number of site-specific mutations in both VRA and VRB, including
substitutions of residues Tyr-62 and Val-63. Concurrently, we replaced
portions of the amphotropic SU with analogous regions from the
polytropic SU in order to analyze larger regions of the amphotropic
binding domain, which we predicted would cause minimal disruption
of the overall structure of the region. Our analyses revealed that both
VRA and VRB were refractory to multiple mutations and substitutions.
Furthermore, the protein retained function despite a deletion within
VRA that removed residues 56 to 62, although larger replacements of VRA
residues 50 to 76 with polytropic sequence did abolish function. These
data suggest that previously identified residues within VRA may not be
as critical for Pit2 interaction within the context of the wild-type
amphotropic envelope protein.
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MATERIALS AND METHODS |
Cell culture.
The 293T/17 cell line was obtained from the
American Type Culture Collection (CRL 11268). 293/12 is a 293 cell line
stably expressing the murine ecotropic MuLV receptor (28).
All cell lines were maintained in Dulbecco's modified Eagle's medium
supplemented with 10% fetal calf serum (Hyclone, Logan, Utah) and 2 mM
glutamine (Gibco BRL, Grand Island, N.Y.).
Plasmids and mutagenesis.
Plasmids pMo(4070A) and pMo(10A1)
are infectious clones of Moloney MuLV (Mo-MuLV) containing 4070A and
10A1 env genes, respectively (23). Plasmid pRR66
is an infectious clone of Moloney mink cell focus-forming (Mo-MCF)
virus (7). All three plasmids were kindly provided by A. Rein (National Cancer Institute-Frederick Cancer Research Facility).
Plasmid pCgp is a cytomegalovirus-driven plasmid expressing Mo-MuLV
Gag-Pol (45). Plasmid pCnBg is a retroviral vector
expressing nuclear
-galactosidase and neomycin resistance genes
(10). Plasmids pSCA (10), pSEC, and pSCP are
4070A, Mo-MuLV, and Mo-MCF virus env expression plasmids,
respectively. The Mo-MuLV env was obtained from
pCEE+ (17) as an EcoRI fragment,
while the Mo-MCF virus env was obtained from pRR66 as an
EagI-to-ClaI fragment. Plasmid E-T461P contains a
single point mutation in the TM subunit of pCEE+
(45).
For site-directed mutagenesis, PCR splice overlap mutagenesis
(12) was used to introduce mutations. Mutants are designated by the amino acid in the 4070A envelope protein followed by the residue
number and the amino acid found in the mutant protein. The amino acid
residues are numbered from the amino terminus of SU after the signal
peptide is cleaved. The chimeric envelope plasmids pPPA and pPAA were
constructed with conserved AflII and EcoRI
restriction sites within amphotropic and polytropic SU (Fig. 1). All other chimeras were constructed
by splice overlap PCR, and all PCR-derived fragments were completely
sequenced to confirm their identity.

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FIG. 1.
Comparison of the N-terminal amino acids of 4070A,
Mo-MCF virus, and chimeric envelope proteins. (A) Schematic of the
N-terminal 4070A SU, based on the disulfide linkages determined in the
envelope protein of polytropic protein (16). Residues in VRA
and VRB are shaded. (B) Amino acid alignment between 4070A and Mo-MCF
virus envelope proteins. Conserved residues are shown in capital
letters, variable residues are shown in lowercase, and gaps appear as
dashes. The residues in 4070A that were mutated are identified with
asterisks; the specific residues changes are listed in Table 1. VRA and
VRB are boxed. (C) Schematic of the wild-type and chimeric 4070A and
Mo-MCF virus envelope proteins. Chimeras are identified by the region
of amino acids in the 4070A envelope protein that are replaced by
residues from the homologous region of the Mo-MCF virus envelope
protein (shown in black), except for PPA and PAA, which were generated
by using conserved EcoRI and AflII sites,
respectively.
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Virus production and titer determination.
Retroviral vectors
were produced by transient transfection of plasmids pCgp, pCnBg, and an
env expression plasmid (5 µg each) into 293T/17 cells
(5 × 105 cells in each 60-mm-diameter dish) by
calcium phosphate precipitation, essentially as described previously
(10, 35). Sixteen hours posttransfection, the precipitate
was removed and replaced with 5 ml of medium containing 10 mM sodium
butyrate (Sigma, St. Louis, Mo.) for 12 h. The cells were then
incubated in 3 ml of fresh medium to allow production of retroviral
vectors, which were harvested after a further 12-h incubation at 37 or
32°C, as specified.
Transductions were performed as described previously (
10).
Essentially, cells were exposed to 10-fold dilutions of retroviral
vector supernatants for 24 h. The cells were then incubated for
a
further 48 h with fresh medium and then stained for

-galactosidase
expression. Titers of viral stocks were expressed as

-galactosidase-expressing
CFU per milliliter.
Interference assays.
Stocks of infectious viruses were
produced by transfecting 15 µg of plasmids pMo(4070A), pMo(10A1), or
pRR66 into 293T/17 cells (5 × 105 cells in each
60-mm-diameter dish) by calcium phosphate precipitation, as described
previously (10). NIH 3T3 cells were infected with the
resulting filtered supernatants, and the infections were monitored by
reverse transcriptase (RT) assay (9) of the culture
supernatants until chronically infected populations were obtained. The
RT activities of the supernatants were calculated from a standard curve
generated with serial dilutions of recombinant MuLV RT (Promega,
Madison, Wis.). Typical chronically infected populations had
supernatant RT activities within the range of 0.01 to 0.1 U/ml.
Interference assays were performed by titering retroviral vector
supernatants on infected NIH 3T3 cells, produced as described
above. A
total of 3 × 10
4 chronically infected NIH 3T3 cells
were seeded in the 30-mm-diameter
wells of a six-well plate in 1 ml of
medium and then transduced
with retroviral vectors as described above
for uninfected cells.
Binding assays.
Binding assays were performed on NIH 3T3
cells, essentially as described previously (42), except that
the initial incubation of 2 × 105 NIH 3T3 cells with
1 ml of vector supernatant was performed at room temperature for 30 min.
Complementation assay.
Retroviral vectors were produced for
complementation assays by transfecting equal amounts of two
env expression plasmids (2.5 µg each) into 293T/17 cells
(5 × 105 cells in each 60-mm-diameter dish), along
with pCgp and pCnBg (5 µg each). Supernatants were harvested at
37°C as described above. The resulting retroviral vectors were
titered on 293 and 293/12 cells, as described above for NIH 3T3 cells.
Western blot analysis of envelope proteins in retroviral vectors
and cell lysates.
Western blotting was performed to detect
specific viral proteins, essentially as described previously
(45). To analyze proteins in retroviral vectors, the
supernatants generated by transient transfection of 293T cells were
pelleted for 30 min at 4°C through 20% sucrose at 16,000 × g. Cell lysates were prepared by lysing the transfected
cells with lysis buffer (100 mM Tris-HCl [pH 7.4], 1%
Triton X-100, 0.05% sodium dodecyl sulfate, 5 mg of sodium deoxycholate/ml, 150 mM NaCl, 1 mM phenylmethylsulfonyl fluoride). The
primary antibodies used were goat anti-Rauscher MuLV SU antiserum at
1:3,000 dilution (lot 79S656; Quality Biotech, Camden, N.J.), goat anti-Rauscher MuLV CA antiserum at 1:10,000 dilution (lot 78S221; Quality Biotech), and rat monoclonal antibody 42/114 against AKR MuLV TM at 1:2,000 dilution (27). The 42/114 hybridoma
cell line was kindly provided by U. Hammerling (Memorial
Sloan-Kettering Cancer Center, New York, N.Y.). The secondary
antibodies used were horseradish peroxidase-conjugated rabbit
anti-goat immunoglobulin G at 1:10,000 dilution and horseradish
peroxidase-conjugated goat anti-rabbit immunoglobulin G at 1:10,000
dilution (Pierce, Rockford, Ill.).
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RESULTS |
4070A envelope protein binding domain can tolerate single amino
acid substitutions throughout variable regions A and B.
In order
to identify one or more residues in the amphotropic envelope
glycoprotein that may serve as contact points for Pit2, we generated a
number of mutations in the amino-terminal binding domain of the 4070A
envelope protein (Fig. 1B). For the most part, the residues targeted
for site-directed mutagenesis were hydrophilic and/or charged residues
in VRA and VRB which were expected to be surface exposed, and amino
acids containing hydrophobic side chains were generally substituted for
them. The resulting envelope protein mutants were incorporated into
retroviral vector particles and assayed for their ability to transduce
NIH 3T3 cells (Table 1).
Except for the R73L mutant, all mutant envelope proteins allowed
transduction of NIH 3T3 cells at levels greater than 10%
of those
achieved by the vectors bearing wild-type 4070A envelope
protein,
suggesting that the identities of mutated residues are
not
critical for the function of the protein. In contrast, the
R73L
mutation completely prevented transduction. Although residues
Tyr-62 and Val-63 have been suggested previously to be essential
for Pit2 recognition (
37), the substitution of either of
these
residues individually had no apparent effect on the transduction
of NIH 3T3 cells.
Residues 56 to 63 of VRA are not necessary for amphotropic receptor
interaction.
Residues 52 to 66 (residues 50 to 64 in Battini et
al. [3]) in the first disulfide loop of amphotropic
VRA have been previously proposed as essential determinants of
amphotropic receptor recognition, and Tyr-62 and Val-63 (Tyr-60 and
Val-61 in Tailor and Kabat [37]) within this region
have been suggested to be critical. Based on a sequence comparison
between the amphotropic 4070A and the polytropic Mo-MCF virus envelope
proteins in this region (Fig. 1B), we hypothesized that a possible
amphotropic contact residue(s) would probably reside within amino acids
56 to 63. Therefore, we deleted these eight amino acids from the
amphotropic envelope protein to produce mutant
56-63 (Fig. 1C).
In addition, we replaced this region with the two amino acids (Glu and
Thr) in the polytropic env sequence to give mutant P56-63
(Fig. 1). Retroviral vectors bearing the
56-63 mutant resulted in
titers on NIH 3T3 cells that were still 8.5% of the wild-type
titers, while vectors with the P56-63 mutant gave titers that were
actually higher than that of the wild-type 4070A (Table
2). Both mutants were unable to
transduce 4070A-infected NIH 3T3 cells (data not shown), indicating
that the mutants utilized only the amphotropic receptor. Our results
indicate that residues 56 to 63 are not critical for Pit2 utilization
by the amphotropic envelope proteins on NIH 3T3 cells and contradict
the findings of Tailor and Kabat (37).
Substitution of the amphotropic receptor binding domain with
polytropic sequences results in loss of function.
Since our
initial analyses of amphotropic SU failed to identify residues that
contributed to Pit2 binding, we decided to construct chimeras between
the amphotropic (A) and polytropic (P) envelope proteins.
Chimeras between the two envelope proteins, constructed by using one or
both of the conserved AflII and EcoRI
restriction sites, have been described previously, albeit with
contradictory results (4, 23). The different isolates
of polytropic envelope proteins utilized by the two groups
were suggested as a possible reason for this discrepancy
(23).
Accordingly, we obtained the Mo-MCF proviral clone that gave rise to
functional chimeras (
23) and reconstructed some of
those
chimeras in a nonreplicative vector system. A conserved
EcoRI site was used to generate chimera PPA, while a
conserved
AflII site was employed for PAA (Fig.
1). These
chimeras are equivalent
to proteins MMA and MAA, respectively (
4,
23). The chimeric
envelope proteins were incorporated into
retroviral vector particles
and assayed for their ability to transduce
NIH 3T3 cells.
The vectors enveloped with PPA or PAA did not give detectable titer on
NIH 3T3 cells (Table
2), consistent with the results
published by
Battini et al. (
4). However, both PPA and PAA
envelope
proteins were incorporated into retroviral vector particles
at
reasonable levels (Fig.
2), suggesting
that the block to transduction
of NIH 3T3 cells was due to the lack of
biological activity of
the envelope chimeras.

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FIG. 2.
Incorporation of chimeric envelope protein into
retroviral vectors as determined by Western blotting. Specific viral
proteins were detected with anti-SU and anti-CA antibodies. Lane No Env
contains vectors produced without an env expression
vector.
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Extensive polytropic substitution of amphotropic VRA prevents
Pit2 interaction.
In an effort to identify the minimal
region(s) of polytropic sequence that was responsible for the
inactivity of the PAA protein, smaller regions of the polytropic
envelope protein were substituted into the homologous regions of the
4070A envelope protein (Fig. 1C). All chimeras were found to be
incorporated into retroviral vectors at reasonable levels (Fig. 2 and
data not shown). The smallest contiguous polytropic substitution that
resulted in a loss of function was the substitution of amphotropic
residues 50 through 76 (Table 2). Further subdivision of this VRA
region by substituting either the first disulfide-linked loop domain (P50-63) alone or most of the interloop domain (P65-76) resulted in
envelope proteins that were capable of transducing NIH 3T3 cells at
near-wild-type levels (Table 2). Once we determined that P65-76
gave titer on NIH 3T3 cells, we expected the vectors bearing P65-76 to
demonstrate a 10A1-like interference pattern and to be able to
transduce 4070A-infected NIH 3T3 cells. We have previously demonstrated
that changing residues Ala-71 and Gln-74 of amphotropic envelope
protein to the 10A1 residues, Gly and Lys, respectively, resulted in a
10A1-like interference pattern (10), and the polytropic
substitution from residues 65 to 76 results in the same changes at
residues 71 and 74. However, P65-76 and all other chimeras capable of
transducing NIH 3T3 cells demonstrated an amphotropic interference
pattern when tested on the chronically infected cells (Table 2).
None of the vectors bearing the inactive chimeras (PPA, PAA, P50-76,
and P50-117) were rescued by production at 32°C (data
not shown).
These vectors also failed to demonstrate measurable
binding to NIH 3T3
cells compared to vectors bearing the 4070A
envelope protein (data not
shown). Thus, the primary defect of
these inactive chimeras appears to
be the lack of an interaction
with Pit2.
Coexpression of P50-76 and Mo-MuLV mutant E-T461P leads to
transduction.
Although our initial characterizations of
mutant P50-76 and the other inactive chimeras appeared to
indicate a binding-defective phenotype, other defects could also
be present. To more fully analyze the defect in P50-76, we conducted a
complementation assay. Previously, we have demonstrated that two
classes of Mo-MuLV envelope protein that are individually defective in
either the receptor binding or the postbinding (fusion) stages of entry
can functionally complement each other in trans within a
mixed hetero-oligomer (43). The coexpression of two such
mutants in our vector production system resulted in vector particles
that were then able to transduce NIH 3T3 cells. In addition, it has
also been demonstrated that 10A1 and ecotropic envelope proteins can
form functional hetero-oligomers (31). Therefore, we
investigated whether P50-76 behaved as a purely
binding-defective mutant in a complementation assay when coexpressed
with a fusion-defective Mo-MuLV envelope protein mutant.
Mutant E-T461P contains a single point mutation in the amino terminus
of the Mo-MuLV TM protein. It is fully competent for
binding to the
ecotropic receptor but is a fusion-defective mutant
(
45). We cotransfected plasmids expressing
P50-76 and E-T461P
into 293T/17 cells, together with
pCgp and pCnBg. The resulting
supernatants were titered on human 293 cells, which express functional
Pit2, and also on 293/12 cells, which
additionally express the
murine ecotropic receptor (
28).
This approach determines whether
any functional complementation is
occurring through the use of
amphotropic or ecotropic receptors.
Although neither mutant gave
titer on 293 or 293/12 cells alone, the
coexpression of P50-76
with E-T461P resulted in retroviral vectors that
were able to
transduce 293/12 cells but not 293 cells (Table
3). Presumably,
the transduction of
293/12 cells occurred through the use of the
ecotropic receptor, with
the receptor binding function provided
by the wild-type SU domain
of E-T461P and the P50-76 mutant providing
the postbinding functions.
These data indicate that the primary
defect in protein P50-76 is its
lack of ability to bind to Pit2.
Mutant R73L exhibits temperature sensitivity due to aberrant
processing.
Retroviral vectors bearing the mutant R73L protein
gave no titer on NIH 3T3 cells (Table 1). When this mutant protein was analyzed by Western blot analysis for its ability to be incorporated into retroviral vectors, a single band was detected with an anti-SU antiserum which migrated at a higher position than the wild-type SU
(Fig. 3A). Probing the blot with an
anti-TM antibody did not reveal any bands corresponding to the
processed TM in vector particles (Fig. 3A). These results suggested
that the higher-migrating band detected for R73L with the anti-SU
antiserum was most likely the uncleaved precursor envelope protein,
possibly due to a defect in the processing of the polyprotein precursor
into SU and TM, as we have previously observed for certain mutants of
Mo-MuLV SU (41).

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FIG. 3.
(A) Incorporation of envelope proteins into retroviral
vectors produced at 37°C. The upper blot was probed with anti-SU and
anti-CA antibodies, and the lower blot was probed with anti-TM
antibody. PR represents the precursor protein. (B) Envelope proteins in
the lysates of transfected 293T cells produced at 37°C and detected
with anti-TM antibody. (C) Incorporation of envelope protein into
retroviral vectors produced at 32°C. The upper blot was probed with
anti-SU and anti-CA antibodies, and the lower blot was probed with
anti-TM antibody. Lanes No Env contain vectors produced without
an env expression vector.
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To verify our findings, we also analyzed the form of the R73L
protein present in the lysates of transfected cells that reacted
with an anti-TM antibody. While the precursor protein was detected
for
both the wild-type 4070A and R73L proteins, the processed
TM protein
was only detected for 4070A (Fig.
3B). Similarly, we
also observed a
lack of processing of the R73L protein into the
mature SU subunit when
the blot was probed with anti-SU antiserum
(data not shown).
To determine whether the inability of the R73L protein to be processed
properly was a result of protein misfolding, we analyzed
whether any
functional protein could be produced at a lower temperature.
When
produced at 32°C, retroviral vectors bearing the R73L protein
were
able to transduce NIH 3T3 cells with titers of 10
4,
indicating a temperature-sensitive mutant (Table
4). In addition,
Western blot analysis of
the vectors now revealed the presence
of a low level of processed TM
protein (Fig.
3C). Although we
were still not able to detect any
processed SU in the vector particles
(Fig.
3C), the amount of SU may
have been at the limit of detection
for this analysis. We have
previously observed titer from MuLV
mutants that gave rise to very
small amounts of processed envelope
proteins in vector particles
(
41). Thus, the low titer observed
at 32°C for R73L
probably arose from the small amount of correctly
processed envelope
protein. Therefore, it is unlikely that the
defect of R73L produced at
37°C is due to a loss of interaction
with Pit2, but rather is due to
a structural defect that results
in inefficient processing of the
precursor protein into SU and
TM.
Substitution of residue R102 in Mo-MuLV VRA also results in
defective precursor processing.
Sequence alignment of the
interloop domain of the VRA regions revealed that Arg-73 of the
amphotropic SU appears to be an invariant residue in all MuLV
subgroups (4) (Fig. 4A).
Therefore, we investigated whether mutation of the corresponding
residue in Mo-MuLV SU, Arg-102, results in a phenotype similar to that of R73L. It has been reported previously that a Mo-MuLV virus bearing
the double mutation of R102G and K104Q was noninfectious, and no
interference with the Moloney murine sarcoma virus was observed in
cells stably expressing this mutant protein, suggesting a defect in
receptor binding (33). Since different substitutions of the
same residue may result in different phenotypes, we generated two
mutations of Mo-MuLV Arg-102. Mutant protein E-R102G corresponds to the
substitution in the double mutation of Skov and Andersen (33), while the E-R102L mutant is analogous to the
amphotropic mutation, R73L.

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FIG. 4.
(A) Amino acid alignment of the VRA interloop domains of
4070A and Mo-MuLV envelope proteins. The conserved arginine residue is
identified with an asterisk. Conserved residues are in capitals, and
variable residues are in lowercase. (B) Incorporation of envelope
proteins into retroviral vectors produced at 37°C. The upper blot was
probed with anti-SU and anti-CA antibodies, and the lower blot was
probed with anti-TM antibody. (C) Envelope proteins in the lysates of
transfected 293T cells grown at 37°C, detected with anti-TM antibody.
PR, precursor protein. Lanes No Env contain vectors produced without an
env expression vector.
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Retroviral vectors bearing either the E-R102G or E-R102L protein gave
no titer on NIH 3T3 cells (data not shown). In contrast
to the
amphotropic R73L protein, production at 32°C did not rescue
titer on
NIH 3T3 cells for either ecotropic mutant. When the mutant
proteins were analyzed for their ability to be incorporated into
retroviral vector particles at 37°C, higher-migrating bands were
detected with the anti-SU antiserum, suggesting the presence of
uncleaved precursor protein (Fig.
4B). In addition, probing with
the
anti-TM antibody did not reveal any bands corresponding to
TM for
either of the two ecotropic mutants (Fig.
4B). When lysates
of the
transfected cells were probed with the anti-TM antibody,
both mutants
had higher levels of the precursor protein than of
the wild-type
Mo-MuLV protein, but processed TM protein was not
detected
(Fig.
3C). Western blot analysis of the R102G and R102L
proteins present in vectors produced at 32°C were identical to
those produced at 37°C (data not shown), implying that the lower
temperature could not rescue the defect in the ecotropic mutants.
The results for the ecotropic Arg-102 substitutions were
similar to the phenotype observed for the amphotropic R73L
protein,
suggesting that a similar structural defect is present
that results
in the inefficient processing of the precursor protein.
Therefore,
we analyzed the local environment of Arg-102 in the crystal
structure
of the ecotropic Friend MuLV binding domain (
8).
The structure
revealed that the side chain of Arg-102 may be involved
in a hydrogen
bond with the backbone of Cys-96 (Fig.
5). Therefore, the substitution
of
Arg-102 could have serious structural consequence for the ecotropic
protein, which could account for the lack of efficient processing
of
the R102 mutant proteins that we observed. In addition, the
similar
phenotypes observed for both the ecotropic and amphotropic
substitutions suggest that this conserved arginine may play a
similarly
important role in envelope protein conformation for
all of the MuLV
subtypes.

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FIG. 5.
(A) Ribbon representation of VRA and VRB of the
ecotropic envelope proteins (8). The amino terminus of VRA
contains an extended coil (a), while the interloop domain contains a
helix (b). VRB also contains a helical region (c). Arg-102 (d) is shown
with its side chain exposed. Cys-96 (e) is at the junction of the VRA
amino-terminal loop and the interloop domain. (B) Potential hydrogen
bond formation (dashed lines) between the side chain of Arg-102 and the
carbonyl group of Cys-96 is shown relative to the disulfide bond
between Cys-96 and Cys-46.
|
|
 |
DISCUSSION |
The critical receptor binding determinants of the amphotropic MuLV
envelope protein are located in the amino-terminal 208 amino acids of
SU (2) and have been suggested to be located, in particular,
in the first disulfide loop domain of VRA (3, 37). Our
analysis of this region failed to identify individual residues that
were critical for receptor interaction, with the amphotropic envelope
protein remaining functional despite several point mutations,
polytropic sequence substitutions, and a deletion within this first
disulfide-linked loop. However, the replacement of a more extensive
region of VRA with polytropic sequence produced a protein that was
unable to interact with the host cell receptor. Therefore, our findings
suggest that multiple residues may be involved in the interaction
between the envelope protein and its receptor.
Two previous studies have implicated the first
disulfide-linked loop of VRA in receptor contact. In particular,
residues Tyr-62 and Val-63 (Tyr-60 and Val-61 in Tailor and Kabat
[37]) of amphotropic VRA have been previously
suggested to be critical for receptor recognition. However, these
observations were made in the context of chimeric envelope
proteins of amphotropic MuLV and feline leukemia virus type B,
titered on a chimeric Pit1-Pit2 receptor. When we mutated these two
residues individually in the amphotropic envelope protein, there was no
apparent effect on the transduction of NIH 3T3 cells. The deletion of
both of these residues in
56-63 resulted in titers that were 8% of
the level attained by vectors containing the wild-type
amphotropic envelope protein. Although
56-63 did demonstrate a decrease in titer, the reinsertion of the two polytropic residues in this region (P56-63) restored titers to the wild-type level. Therefore, the decrease in titer for
56-63 probably
reflected a compromise in the structural integrity of the region rather than a deletion of residues that are essential for receptor
interaction. Taken together, our data clearly demonstrate that there is
no requirement for Tyr-62 and Val-63 in the interaction of
amphotropic envelope protein with murine Pit2.
A second study identified a 14-amino-acid segment between residues 52 and 66 (residues 50 to 64 in Battini et al. [3]) of
the first disulfide loop of VRA as being an essential determinant of
amphotropic receptor interaction. The replacement of this segment with
a foreign linear peptide appeared to block interaction of the
amphotropic envelope protein with its receptor. However, extensive mutagenesis within this first disulfide loop domain failed to identify
any single residue as being essential for receptor interaction. In
addition, the amphotropic protein was able to tolerate the loss of
residues 56 to 63 and the replacement of residues 50 to 63 or 65 to 76 with the corresponding polytropic sequences, although the
replacement of a larger segment, spanning residues 50 to 76, with the
corresponding polytropic sequence (P50-76) did abolish receptor
utilization.
Further analysis of P50-76 confirmed that it was indeed a
binding-defective envelope protein. Although it was unable to bind to
or transduce Pit2-expressing cells, it was competent to provide postbinding functions when coexpressed with a fusion mutant of the
ecotropic MuLV envelope protein. As we have previously proposed (43, 44), it is likely that functional complementation
occurred between P50-76 and the ecotropic fusion mutant as a result of the formation of hetero-oligomers. Our results indicate that envelope protein monomers from different subgroups of MuLV can oligomerize with
each other, as has previously been demonstrated for the ecotropic and
10A1 MuLV proteins (31). These findings indicate that the primary domain(s) involved in oligomerization between MuLV envelope protein monomers is likely to be located within a conserved region(s) of the protein.
The binding-defective phenotype of the P50-76 mutant implicated both
the first disulfide loop and the interloop domain of VRA as being
essential for Pit2 interaction. The competency of both P50-63 and
P65-76 argues against a single critical residue for Pit2 recognition
being present in residues 50 to 76, at least among the variable
residues between the amphotropic and polytropic envelope proteins, and
instead points to a more complex receptor binding domain. It is
possible that contact points exist in both the variable first disulfide
loop and the more conserved interloop domain within VRA. Thus, although
the loss of some of these contact residues could be tolerated
individually, the combined loss of contact residues in P50-76 would
reduce binding efficiency below a critical level. The involvement
of multiple residues in receptor recognition has been suggested for
other retrovirus envelope proteins, including the ecotropic MuLV
envelope protein (1) and avian sarcoma and leukosis viruses
(32).
The crystal structure of the amino terminus of the ecotropic SU reveals
that the interloop domain forms a helix that may be important for the
structure of the envelope protein (8). Various insertions in
the interloop domain have been shown previously to result in impaired
SU-TM cleavage, transport to the cell surface, and incorporation into
virions (3, 26, 36), which are suggestive of structural
defects. We observed a similarity in the phenotypes of both ecotropic
and amphotropic mutants
a conserved arginine residue in this helical
region
that was consistent with the region playing an important role
in the overall structure of the protein. Therefore, at least this
region of VRA in the amphotropic binding domain may be organized
similarly to the ecotropic binding domain. The difference between the
ecotropic and amphotropic arginine substitutions in terms of their
ability to be rescued by production at 32°C may be due to the fact
that VRA has a simpler composition in the amphotropic protein, allowing
for partial correction at a lower temperature.
Once we observed that the substitution mutant P65-76
resulted in titer on NIH 3T3 cells that was similar to the
wild-type amphotropic level, we investigated whether retroviral
vectors bearing this protein demonstrated a 10A1-like interference
pattern. We have previously demonstrated that changing the residues
Ala-71 and Gln-74 of the amphotropic envelope protein to the 10A1
residues, Gly and Lys, respectively, resulted in a 10A1-like
interference pattern, i.e., an ability to infect amphotropic
MuLV-infected NIH 3T3 cells (10). The polytropic sequence
between residues 65 and 76 contains the 10A1 residues at these two
positions, but mutant P65-76 gave an amphotropic interference pattern.
We have previously suggested that the 10A1-specific residues exert
their effects indirectly on the binding domain rather than acting as direct contact points for the 10A1 receptor, Pit1 (10). In
addition, this effect was proposed to be quite subtle, as
amphotropic envelope proteins for which 10A1 residues were
substituted retained their ability to interact with Pit2.
Therefore, the additional residue changes contained within the
polytropic substitution P65-76 may have prevented the conversion
of the amphotropic binding domain to a structure that could
additionally recognize Pit1. We are currently exploring this
possibility.
Overall, our analysis suggests that multiple residues of
the amphotropic binding domain participate in Pit2 recognition
and that most or all of these residues may be located within the first disulfide loop and the interloop domain of VRA. In addition,
our analysis of mutants of a conserved arginine residue in VRA of both the amphotropic and ecotropic envelope proteins suggests that despite the high variability in the VRA sequences, the
overall organization of the region in different MuLV subtypes may be
similar. One could speculate, therefore, that targeted in vitro
evolution of the variable regions of the MuLV envelope proteins may
generate envelope proteins with novel receptor specificity for the
purpose of gene therapy while conserving important postbinding
functions in the molecule.
 |
ACKNOWLEDGMENTS |
We thank Albert J. MacKrell, Nai-Wei Soong, Kin-Man Lai, and Jane
Xia from the Gene Therapy Laboratories for their assistance and helpful
comments.
This work was supported by GTI/Norvartis and by grant CA59318-04
from NIH.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Norris Cancer
Center, Rm. 633, University of Southern California School of Medicine, 1441 Eastlake Ave., Los Angeles, CA 90033. Phone: (213) 764-0673. Fax:
(213) 764-0097. E-mail: pcannon{at}hsc.usc.edu.
 |
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