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Journal of Virology, October 1998, p. 7950-7959, Vol. 72, No. 10
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Analysis of Minimal Human Immunodeficiency Virus
Type 1 gag Coding Sequences Capable of Virus-Like
Particle Assembly and Release
Chin-Tien
Wang,*
Hsiu-Yu
Lai, and
Jue-Jyh
Li
Institute of Clinical Medicine, National
Yang-Ming University, and Department of Medical Research, Veterans
General Hospital-Taipei, Taipei, Taiwan 11217, Republic of China
Received 16 January 1998/Accepted 15 June 1998
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ABSTRACT |
We have constructed a series of human immunodeficiency virus (HIV)
gag mutants by progressive truncation of the
gag coding sequence from the C terminus and have combined
these mutants with an assembly-competent matrix domain deletion
mutation (
MA). By using several methods, the particle-producing
capabilities of each mutant were examined. Our analysis indicated that
truncated Gag precursors lacking most of C-terminal gag
gene products assembled and were released from 293T cells.
Additionally, a mutant with a combined deletion of the MA (
MA) and
p6 domains even produced particles at levels comparable to that of the
wild-type (wt) virus. However, most mutants derived from combination of
the
MA and the C-terminal truncation mutations did not release
particles as well as the wt. Our smallest HIV gag gene
product capable of virus-like particle formation was a 28-kDa protein
which consists of a few MA amino acids and the CA-p2 domain. Sucrose
density gradient fractionation analysis indicated that most mutants
exhibited a wt retrovirus particle density. Exceptions to this rule
were mutants with an intact MA domain but deleted downstream of the p2
domains. These C-terminal truncation mutants possessed particle densities of 1.13 to 1.15 g/ml, lower than that of the wt. The N-terminal portions of the CA domain, which have been shown to be
dispensable for core assembly, became critical when most of the MA
domain was deleted, suggesting a requirement for an intact CA domain to
assemble and release particles.
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INTRODUCTION |
The human immunodeficiency virus
(HIV) gag gene encodes a primary core structural protein
that is synthesized initially as a polyprotein,
Pr55gag (34, 41). During translation,
a myristic acid is cotranslationally attached to the N terminus of
Pr55gag (50, 56), which is required
for membrane association and particle assembly (3, 36). At
the plasma membrane, the myristylated Pr55gag
molecules self-assemble into virus-like particles and bud out from the
cell membrane (5, 48). When virus particles are budding
(25), the Pr55gag is cleaved by the
virus-encoded protease (PR) into p17 (matrix [MA]), p24 (capsid
[CA]), p2, p7 (nucleocapsid [NC]), p1, and p6 (19, 30,
34). The PR-mediated maturation process of virus particles is
essential for virus infectivity (16, 27, 38). In addition to
PR, enzymes encoded by pol include reverse transcriptase (RT), RNase H, and integrase, which are required for virus replication (41). The pol gene products are translated as a
fusion protein, Pr160gag-pol, by a ribosomal
frameshifting mechanism that occurs at a frequency of 5 to 10% during
translation of Pr55gag (23). The
Gag-Pol protein is thought to be assembled into virions via interaction
with Pr55gag (22, 37, 45, 47).
Subsequent dimerization of the Gag-Pol molecules induces activation of
the embedded PR to cleave Pr55gag and
Pr160gag-pol (25, 29).
It is clear that the retroviral gag gene contains sufficient
information for particle formation (13, 15, 26, 43). The MA
protein lies immediately underneath the membrane and forms the viral
matrix (14, 39, 40). It is responsible for membrane association and targeting of the Gag precursors to the plasma membrane
(2, 11, 46, 63). Mutations within the MA protein sequences
have been shown to severely affect stable membrane binding, mutant
precursor transport, and particle assembly (12, 14, 46, 54,
62). Incorporation of Env into virus particles is also dependent
on the integrity of the MA domain (9, 60). Although subtle
mutations in the HIV MA domain may severely disrupt particle assembly
(6, 12, 14, 42, 54), a mutant (
MA) with a deletion of
about 80% of the MA domain has been shown to assemble and process
virus particles with wild-type (wt) retrovirus particle densities and
to possess wt RT activity (53). Furthermore, replacement of
the entire HIV MA with a myristylation signal did not affect particle
formation (28). One possible explanation for this
discrepancy is that deleterious effects of the smaller mutations on Gag
particle assembly have been removed in the MA deletion mutants.
The CA domain is the major core protein of virus particles. Deletion or
insertion mutations of the murine leukemia virus CA domain can impair
particle assembly (44). However, most regions of the Rous
sarcoma virus (RSV) CA can be deleted without significantly affecting
particle assembly and release (57-59). Comparative analysis of retroviral Gag proteins identifies a highly conserved sequence, termed the major homology region (MHR), in the C-terminal regions of
the CA domains (32). The MHR has been shown to be important for virion assembly in HIV (8, 20, 32, 33, 51) and Mason-Pfizer monkey virus (49). In contrast, a 56-amino-acid deletion mutation in the N-terminal region of HIV CA has been demonstrated to have no major effects on particle assembly and release
(7, 54). Concerning the functions of the HIV Gag C-terminal
domains, the p7 NC domain contains two Cys-His motifs which are
essential for packaging viral RNA into virus particles (1),
while the C-terminal p6 domain has been proposed to be involved in the
process of virus budding (15, 21). Accumulating data have
indicated that the p7NC and p6 domains may not be absolutely required
for particle assembly and release (24, 43, 46, 61), while
functions of the p2 and p1 peptides are still unclear.
As described above, some regions within HIV gag appear to be
dispensable for particle assembly and release. It has been demonstrated in vitro that recombinant HIV CA proteins (10, 18) or
purified HIV or RSV CA-NC proteins (4) can assemble into
rod-like structures. In addition, a small RSV Gag protein (25 kDa) has
been shown to be competent for particle release (55).
However, minimum HIV gag sequences required for particle
assembly and release from mammalian cells have not been defined. In
this study, we constructed a series of C-terminally truncated HIV
gag mutants and mutants derived from combination of the
C-terminal truncation mutants and an MA deletion (
MA) mutant
(53). The abilities of these mutants to assemble and release
virus particles were assessed by Western immunoblotting and sucrose
density gradient fractionation experiments. Localization of the mutant
Gag proteins in expressing cells was revealed by indirect
immunofluorescence experiments, and mutant particle-associated RT
activities were tested by in vitro RT assays. Our results show that
mutants with total deletions of about 30 to 50% of HIV type 1 (HIV-1)
gag codons still assembled and released particles, which
possessed wt retrovirus particle densities. Through these studies, we
have identified a minimal HIV gag sequence encoding a 28-kDa
recombinant protein capable of particle assembly and release from 293T
cells.
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MATERIALS AND METHODS |
Plasmid construction.
The parental HIV-1 proviral plasmid
DNA in this study is HXB2C (41). Two sets of HIV
gag mutations were engineered: one consists of a series of
progressive C-terminal truncations (Fig. 1A), and the other one was obtained by
combination of an MA deletion mutation (
MA) and the C-terminal
truncation mutations (Fig. 1B). To construct the p6 Gag deletion
mutation, two consecutive stop codons were introduced into the
N-terminal-coding region of the p6 gene (nucleotide [nt] 2133). The
resultant clone, with the gag reading frame terminated at
codon 449, was referred to as T449. The sequence of T449 from nt 2121 is 5' CCA GGG ATC CTT TAA TAG AGC 3', which
contains a BamHI site (boldface) 5' to the adjacent stop
codons (underlined). To make additional C-terminal truncation
mutations, constructs carrying BamHI linker insertions at nt
2071, 1939, 1918, and 1876 were cut with ClaI and
BamHI, and the ClaI (nt 831)-to-BamHI
fragments of each mutant construct were used to replace the
corresponding fragment of T449. These steps resulted in a deletion of
gag sequences from linker insertion sites to the T449
BamHI site (nt 2133), with concomitant introduction of the
terminator codons, to yield the constructs T431, T387, T380, and T366.
The number of each designated construct indicates the position of the
gag codon replaced by the stop codons. The juncture
sequences for the resultant C-terminal truncation Gag mutants are as
follows: T431, nt 2067-5' ACT GGG ATC CTT TAA
TAG AGC 3'; T387, nt 1935-5' TTT AGG ATC CTT TAA
TAG AGC 3'; T380, nt 1914-5' ATA AGG ATC CTT TAA
TAG AGC 3'; and T366, nt 1872-5' GTT TGG ATC CTT
TAA TAG AGC 3'. The
MA (53) and
NC
(52) mutants were as described previously. Briefly, the
MA mutation was generated by deletion of the gag coding
sequence from the ClaI site at nt 831 to the
PvuII site at nt 1147 and insertion of a SalI
linker in the deleted region. The resultant construct contained a
replacement of 105 deleted codons by sequence encoding four amino acid
residues. For construction of the
NC mutant, the HIV-1
gag sequence from the ApoI site at nt 1905 to the
RsaI site at nt 2066 was removed and replaced by a
polylinker, 5'-TCCTGCAGCCCGGGGGATCCGCGGGGT-3'. The other
mutants, as illustrated in Fig. 1B, were derived from recombinations of mutant constructs shown in Fig. 1A. Combination of the
MA and
NC
mutants generated the MN construct, and introduction of the
MA
mutation into T449, T431, T387, T380, and T366 yielded constructs MT449, MT431, MT387, MT380, and MT366, respectively. Each mutant construct was confirmed either by restriction enzyme digestion or by
sequencing. All gag mutations were subcloned into HIV gpt (35).

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FIG. 1.
HIV gag mutations. Mature processed Gag
protein domains of the wt and deletion (dashed lines) and truncation
mutants are indicated. All HIV mutants were expressed in the HIV gpt
backbone and are described in detail in Materials and Methods. The
abilities of the mutants to direct particle release are summarized on
the right: +++, release efficiency comparable to wt ( 80% of wt); ++,
efficiency about 30% of wt; +, efficiency about 2 to 10% of wt; ,
no detectable medium Gag antigens. (A) The MA mutant contains a
deletion of 105 codons and a replacement of four amino acid residues in
the MA protein. For the NC mutation, 53 codons, including most of NC
and a few codons corresponding to the p2 C terminus, were deleted and
replaced by 8 codons. The numbers of the C-terminal truncation
constructs indicate positions of the HIV gag codons which
were replaced by the termination codon. As described in Materials and
Methods, T449 was generated by insertion of stop codons in the C
terminus of p1. For T431, T387, T380, and T366, the gag
coding sequences downstream of the designated codons were deleted.
Changed or added codons which resulted from deletion or truncation
mutations are underlined. Note that the stop codon insertion in T449
caused an amino acid change in p6 of Gag-Pol from Glu-Phe-Ser-Ser to
Asp-Pro-Leu-Ile. The gag-pol frameshift signals were deleted
in mutants T431, T387, T380, and T366. (B) Mutant constructs were
derived from recombination of the mutants shown in panel A. The
combination of MA and NC generated construct MN, and introduction
of the MA mutation into T449, T431, T387, and T366 yielded
constructs MT449, MT431, MT387, and MT366, respectively.
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Cell culture and transfection.
293T cells were maintained in
Dulbecco's modified Eagle's medium (DMEM) supplemented with 10%
fetal calf serum. Confluent 293T cells were split 1:10 onto
10-cm-diameter dishes 24 h before transfection. Twenty micrograms
of plasmid DNA of wt or mutant HIV gpt was transfected onto 293T cells
by the calcium precipitation method (17), with addition of
50 µM chloroquine to enhance transfection efficiency. At 2 to 3 days
posttransfection, culture media and cells were harvested for protein
analysis.
Protein analysis.
At 48 to 72 h posttransfection,
culture supernatants of transfected 293T cells were collected and
filtered through 0.45-µm-pore-size filters, followed by
centrifugation through 2 ml of 20% sucrose in TSE (10 mM Tris-HCl, 100 mM NaCl, 1 mM EDTA) plus 0.1 mM phenylmethylsulfonyl fluoride (PMSF) at
4°C for 40 min at 274,000 × g (SW41 rotor at 40,000 rpm). Viral pellets then were suspended in IPB (20 mM Tris-HCl [pH
7.5], 150 mM NaCl, 1 mM EDTA, 0.1% sodium dodecyl sulfate [SDS],
0.5% sodium deoxycholate, 1% Triton X-100, 0.02% sodium azide) plus
0.1 mM PMSF. The cells were rinsed with ice-cold phosphate-buffered saline (PBS), collected in IPB plus 0.1 mM PMSF, and then subjected to
microcentrifugation at 4°C for 15 min at 13,700 × g
(14,000 rpm.) to remove cell debris. Supernatant and cell samples were mixed with equal volumes of 2× sample buffer (12.5 mM Tris-HCl [pH
6.8], 2% SDS, 20% glycerol, 0.25% bromophenol blue) and
-mercaptoethanol to 5% and boiled for 4 to 5 min. Samples were
resolved by electrophoresis on SDS-10% polyacrylamide gels and
electroblotted onto nitrocellulose membranes. Membrane-bound HIV Gag
proteins were immunodetected by an enhanced chemiluminescence detection
system or by a colorimetric method, using as a primary antibody an
anti-p24gag monoclonal antibody (mouse hybridoma
clone 183-H12-5C, obtained through the AIDS Research and References
Reagent Program, National Institute of Allergy and Infectious Disease
and used at a 1:5,000 dilution from purified ascites fluid). For
colorimetric immunodetection, the secondary antibody was a sheep
anti-mouse immunoglobulin G-alkaline phosphatase conjugate at a
1:2,000 dilution (Vector Laboratories). For enhanced chemiluminescence
immunodetection, the secondary antibody was a sheep antimouse
horseradish peroxidase-conjugated antibody at a 1:4,000 dilution, and
horseradish peroxidase activity detection was by the protocol of the
manufacturer (Amersham). Immunodetected bands on films were quantitated
with a Personal Densitometer (Molecular Dynamics).
In vitro RT assay.
Culture supernatants of transfected 293T
cells were harvested, filtered, and pelleted as described above. Viral
pellets were resuspended in 30 µl of TSE buffer. A 10-µl aliquot of
each sample was mixed with 40 µl of a reaction cocktail containing
0.1% Triton X-100, 5 mM dithiothreitol, 10 mM MgCl2, 50 mM
Tris-HCl (pH 8.0), 1.2 mM poly(rA)-(dT)15 (Boehringer
Mannheim), and 25 µCi of [3H]TTP per ml
(38). Reactions were allowed to proceeded at 37°C for
2 h, followed by addition of 5 µl of tRNA (10 mg/ml). The reaction mixtures then were precipitated with ice-cold 10%
trichloroacetic acid and filtered with GF/C filters. After the filters
were washed and dried, their radioactivities were counted with a
Beckman scintillation counter to determine RT activity. To assess
particle-associated RT activity for each gag mutant, 10-µl
aliquots were analyzed by Western immunoblotting and densitometric
quantitation.
Sucrose density gradient fractionation.
Culture supernatants
of transfected 293T cells were collected, filtered, and centrifuged
through 2-ml 20% sucrose cushions as described above. Viral pellets
were suspended in TSE buffer and overlaid on top of premade 20 to 60%
sucrose gradients consisting of 1-ml layers of 20, 30, 40, 50, and 60%
sucrose in TSE which had been allowed to mix by sitting for 2 h.
Gradients were centrifuged at 274,000 × g (SW50.1
rotor; 40,000 rpm) for 16 to 18 h at 4°C, and 500-µl fractions
were collected from top to bottom. Each fraction was measured for
density and analyzed for Gag proteins by Western immunoblotting.
Indirect immunofluorescence.
The protocol for
immunofluorescence was as previously described (54).
Briefly, confluent 293T cells were split 1:80 onto coverslips at
24 h before transfection. Two days after transfections, cells were
fixed at 4°C for 20 min with ice-cold PBS containing 3.7%
formaldehyde. The cells then were washed once with PBS and once with
DMEM plus 10% heat-inactivated calf serum (DMEM-calf serum) and
permeabilized at room temperature for 10 min in PBS plus 0.2% Triton
X-100. Samples were incubated with primary antibodies for 1 h and
with secondary antibodies for 30 min. Following each incubation,
samples were subjected to three 5- to 10-min washes with DMEM-calf
serum. The primary antibody was a mouse
anti-p24gag monoclonal antibody at a 1:500
dilution, and the secondary antibody was a rabbit anti-mouse
rhodamine-conjugated antibody at a 1:100 dilution (Cappel). After the
last DMEM-calf serum wash, coverslips were washed with PBS three times
and mounted in 50% glycerol in PBS for viewing.
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RESULTS |
Expression and assembly of HIV gag mutants.
In
order to define the boundaries of HIV gag sequences
necessary for particle assembly and release, a series of truncation and
deletion mutations in the HIV gag coding sequences (Fig. 1) were constructed and introduced into a replication-defective HIV vector, HIV gpt (35). As described in Materials and Methods, mutants T449, T431, T387, T380, and T366 were truncated downstream of
codons 449, 431, 387, 380, and 366, respectively. Two previously constructed HIV-1 gag mutants,
MA (53) and
NC (52), also were included in this study.
To test the effects of these mutations on HIV particle assembly and
release, mutant and wt HIV gpt constructs were transiently
expressed in
293T cells. Culture medium supernatant and cell lysate
samples were
prepared and subjected to SDS-polyacrylamide gel
electrophoresis
(SDS-PAGE) followed by electroblotting onto a
nitrocellulose filter as
described in Materials and Methods. HIV
Gag proteins then were
immunodetected with an anti-p24
gag monoclonal
antibody. Pr55, p41, and the mature Gag product p24
(CA) were observed
in the wt cell and medium samples (Fig.
2,
lanes 2 and 12). An incompletely
processed Gag product, p25, was
also visible in the wt cell sample, in
agreement with previous
reports (
34,
42). T449 expressed and
released a predicted
Gag precursor, Pr50 (corresponding to wt Pr55 with
the truncation
of p6), as well as p41 and p24/25 (Fig.
2, lanes 3 and
13). Some
minor p24-associated bands (p50 [Fig.
2, lane 2] and p55
[lanes
3 and 4]) may result from either partial degradation or
incomplete
denaturation of the pelleted Gag proteins, as similar
phenomena
were observed in medium samples from COS7 cells expressing
HIV
Gag proteins (
7,
54).

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FIG. 2.
Expression and release of wt and mutant Gag proteins.
293T cells were transfected with the designated constructs. At 48 to
72 h posttransfection, supernatants and cells were collected and
prepared for protein analysis as described in Materials and Methods.
Supernatant samples (lanes 1 to 9), corresponding to 30% of the total
samples, and cell samples (lanes 11 to 19), corresponding to 4% of the
total samples, were fractionated by SDS-10% PAGE and electroblotted
onto a nitrocellulose filter. HIV Gag proteins were detected with a
mouse anti-p24gag monoclonal antibody at a
1:5,000 dilution, followed by a secondary horseradish
peroxidase-conjugated sheep antimouse antibody at a 1:4,000 dilution,
and peroxidase activity was determined. Positions of molecular size
markers (Std.) (lanes 10 and 20) are indicated on the right, and those
of HIV Gag proteins Pr55, p41, and p24 are shown on the left.
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Truncation of p6 and p1 (T431) also had no major effects on particle
assembly and release (Fig.
2, lanes 4 and 14), as the
levels of
released mutant Gag precursors were not greatly reduced
relative to wt
levels. Similarly, mutants T387, T380, and T366
expressed and released
mutant Gag precursors Pr42 to Pr39 (Fig.
2, lanes 5 to 7 and 15 to 17, respectively), corresponding to
the wt Pr55 with truncations of
p7NC-p1-p6 (T387 and T380) or
p2-p7NC-p1-p6 (T366). A Gag precursor,
Pr42, for

NC also was
detected in medium supernatants at unreduced
levels, relative
to wt levels (lanes 8 and 18). Consistent with
previous results
(
53), the

MA mutant was assembled and
processed, and its Gag
products were detected as bands of 42, 28, and
24 kDa (corresponding
to wt Pr55, p41, and p24 respectively), with p24
(CA) representing
the major species (lanes 9 and 19).
The results shown in Fig.
2 indicate that our HIV
gag
mutants were still capable of particle assembly, although some mutant
proteins were not released as well as wt proteins. However, in
order to
test the possible effects of multiple mutations on virus
particle
assembly, we introduced the

MA mutation into constructs
containing
the

NC and the C-terminal
gag truncation mutations
and
tested the capabilities for particle assembly and release
of each
recombinant. As illustrated in Fig.
1B, combination of
the

MA
mutation with the mutations T449, T431, T387, T380, T336,
and

NC
yielded constructs MT449, MT431, MT387, MT380, MT366,
and MN,
respectively. An addition construct in which

MA was combined
with a
deletion of 56 amino acids (HIV-1 proviral
gag sequences
from the
NsiI site at nt 1251 to the
PstI site at
nt 1418) yielded
the construct designated MN

NP. Expression and
assembly of the
recombinant Gag proteins were tested in 293T cells as
described
above. As shown in Fig.
3,
lanes 13 to 19, all mutant constructs
expressed Gag proteins with
molecular masses corresponding to
their predicted
gag coding
sequences: Gag proteins of MT449 and
MT431 were detected as bands of 38 to 37 kDa (Fig.
3, lanes 13
and 14, respectively); the MT387, MT380,
and MT366 Gag proteins
were detected as bands of about 29 to 28 kDa
(lanes 15 to 17);
and the MN and MN

NP Gag proteins were observed as
bands of 35
and 30 kDa, respectively (lanes 18 and 19). Interestingly,
most
of these mutant constructs still could direct the assembly and
release of Gag particles into the culture media (Fig.
3, lanes
3 to 9).
The two exceptions were mutants MT366 and MN

NP, which
appeared to be
blocked in particle release (lanes 7 and 9 respectively).
Although the
results in Fig.
3 indicate reduced particle release
for most of the

MA double mutants, we nevertheless have identified
a minimum HIV
gag coding sequence (MT380) capable of particle
assembly.
MT380 encoded a small HIV recombinant protein (28 kDa)
which consisted
mainly of p24-p2, the MA myristylation signal,
and a few MA C-terminal
residues just before the MA-CA cleavage
site.

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FIG. 3.
Assembly and release of HIV Gag proteins. 293T cells
were transfected with wt HIV gpt and mutant plasmids. Forty-eight hours
later, cell and supernatants were collected for protein analysis as
described in Materials and Methods. Samples were fractionated by
SDS-10% PAGE and then subjected to immunoblot analysis with
anti-p24gag antibody as described in the legend
to Fig. 2. Std., standards. Positions of molecular size markers are
indicated on the right, and those of HIV Gag proteins Pr55, p41, and
p24 are shown on the left.
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While we observed that intracellular amounts of wt and mutant Gag
proteins were roughly comparable, the levels of some mutant
Gag
proteins in the medium were remarkably reduced in comparison
to wt
levels (Fig.
2 and
3). To quantitate these differences,
we adopted a
previously described methodology to evaluate the
effects of
gag mutations on HIV particle release (
54). Total
levels of each Gag protein in cells and medium were quantitated
by
scanning densitometry, and the extracellular/intracellular
Gag protein
ratios were determined. For normalization, the ratios
obtained with
each mutant were divided by wt ratios in parallel
experiments. Our
results, shown in Fig.
4, indicate that
mutants
T449, T431, and MT449, possessed medium/cell Gag ratios that
were
comparable to wt ratios (

80% of wt). In contrast, the particle
release efficiencies were about 30% for T387; 10% for T380,

NC
MT387, and MN; and about 2 to 5% for T366, MT431, and MT380. Neither
MT366 nor MN

NP Gag antigens were detected in the medium. These
results indicate that except for T449, T431, and MT449, the C-terminal
truncation or

MA double mutation mutants were significantly impaired
(T387, T380, T366,

NC MT431, MT387, and MN) or completely blocked
(MT366 and MN

NP) in particle release. Our observed low values
of
mutant protein release could result from inefficient particle
release
or from protein instability in virus particles. To test
the stability
of particle-associated Gag proteins, culture media
containing wt or
mutant virus-like particles were incubated at
37°C for 4 h,
pelleted through 20% sucrose cushions, and then
subjected to Western
immunoblotting analysis. Since we have not
observed major differences
in the loss of Gag signals after a
4-h incubation (data not shown), we
favor the hypothesis that
these mutants are inhibited in particle
release and that most
of their Gag mutant proteins may be trapped
intracellularly.

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FIG. 4.
Release of HIV Gag proteins from cells. Supernatant and
cell samples of wt and mutant constructs were analyzed by Western
immunoblotting as described in Materials and Methods. Gag proteins from
medium or cell samples were quantitated by scanning mutant and wt Pr55,
p41, and p24/25 band densities from immunoblots. Ratios of total Gag
protein levels in the media to those in cells were determined for each
construct and compared with release levels of wt virus by dividing the
release ratio for each mutant by the ratio for the wt in parallel
experiments and multiplying by 100. Values for mutants T449, T387,
T380, and T366 were derived from three experiments each, and all others
were from two experiments each. Error bars indicate standard
deviations. dl., .
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Indirect immunofluorescence detection of HIV Gag proteins.
To
investigate the intracellular locations of mutant Gag proteins,
indirect immunofluorescence studies were performed with an
anti-p24gag first antibody and a
rhodamine-conjugated rabbit anti-mouse second antibody as described in
Materials and Methods. As illustrated in Fig.
5A, wt Gag proteins were detected
throughout the cytoplasm of transfected cells with a heterogeneous
cytoplasmic staining pattern and a slight perinuclear ring. Similar
patterns were seen in the cases of mutants T449 and T431 (Fig. 5D and
E, respectively). In contrast, most of the
MA Gag proteins appeared
to be localized to perinuclear areas (Fig. 5B), a pattern similar to
that of
MA-transfected COS7 cells (53). The staining
patterns of MT449 and MT431 (Fig. 5J and K, respectively) appeared to
be roughly similar to the
MA pattern. However, these patterns did
not correlate with the levels of particle release, as
MA and MT449
proteins were efficiently released from cells but MT431 proteins were
not. Interestingly, cells expressing Gag proteins with intact MA
domains but with deletions or truncations in their NC domains (
NC,
T387, T380, and T366 [Fig. 5C, F, G, and H, respectively]) showed
flat homogeneous staining patterns with no clear perinuclear ring.
These patterns were similar to that of COS7 cells expressing HIV
Gag-
-galactosidase fusion proteins with intact MA but deleted NC
domains (52). About 80 to 90% of
NC-transfected cells
looked like this, while the others appeared similar to the wt. The
proportions of transfected 293T cells that exhibited such a staining
pattern were approximately 50 to 60%, 60 to 70%, and 70 to 90% for
T387, T380, and T366 respectively, with increased percentages somewhat
correlating with the extent of C-terminal truncations. In contrast, MA
deletion counterparts MN, MT387, MT380, and MT366 (Fig. 5I, L, M, and
N, respectively) and MN
NP (Fig. 5O) all stained in a heterogeneous
punctate pattern with fluorescence extending to cell periphery regions
but slightly enriched around perinuclear areas. Such results suggest
that the MA deletion double mutant proteins may be trapped
intracellularly, perhaps reflecting their impairments in particle
release.

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FIG. 5.
Indirect immunofluorescence detection of HIV Gag
proteins in 293T cells. 293T cells grown on coverslips were transfected
with wt HIV gpt (A) and mutants MA (B), NC (C), T449 (D), T431
(E), T387 (F), T380 (G), T366 (H), MN (I), MT449 (J), MT431 (K), MT387
(L), MT380 (M), MT366 (N), and MN NP (O). At 48 h
posttransfection, cells were fixed and permeabilized for
immunofluorescence assays as described in Materials and Methods. The
primary antibody was 1:500 dilution of a mouse
anti-p24gag, and the secondary antibody was a
1:100 dilution of rhodamine-conjugated rabbit antimouse antibody.
Mock-transfected 293T cells and cells not exposed to the primary
anti-Gag antibody yielded no signals (data not shown). Bar in panel O,
10 µm.
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Sucrose density gradient fractionation of HIV gag
mutants.
Since culture supernatants of transfected 293T cells were
centrifuged through 20% sucrose cushions for 40 min, we believed that
the recovered Gag proteins in the pelleted media should be virus
associated (54). However, because some of these mutants had
major deletions, we performed sucrose density gradient fractionation experiments to test whether such large deletion mutations had any
effects on virus particle densities. To do so, virus-containing medium
samples that had been centrifuged through 2-ml 20% sucrose cushions
were resuspended in TSE buffer, layered over premade 20 to 60% sucrose
gradients, and centrifuged at 274,000 × g for 16 h, after which fractions were collected and analyzed for sucrose density and Gag proteins. All of our particle-producing mutants were
analyzed by this protocol except
MA, which previously has been shown
to have a wt retrovirus particle density (53). For comparison with wt HIV particle densities in parallel, viral pellets of
some mutants also were spun with the wt pellets through the same
sucrose density gradients. As predicted, wt HIVgpt, T449, T431, and
NC particles all showed peak fractions with densities of 1.16 to
1.18 g/ml (data not shown), consistent with wt retrovirus particle
densities. In contrast, the densities of T387 (Fig.
6A) and T380 (Fig. 6B) were about 1.143 to 1.149 g/ml, slightly lower than those of wt HIV particles. The T366
particles, which contain only MA and CA domains, produced particles
which exhibited densities of 1.129 g/ml (Fig. 6C), much lower than the
wt HIV particle density, suggesting an altered morphology.
Cocentrifugation of MN and wt viral pellets showed that both wt and MN
Gag proteins had peaks in fraction 5 with a density of 1.177 g/ml (Fig.
6F). Similarly, Gag proteins in particles produced by the constructs
MT449, MT431, MT387, and MT380 cosedimented with the wt Gag proteins
and banded in fractions with densities between 1.160 and 1.179 g/ml
(Fig. 6D and E). Since the assembly of very small HIV Gag proteins into particles was unusual, we further tested whether these mutant particles were membrane enveloped. To do so, medium supernatants from
wt-, T366-, MT387-, and MT380-transfected 293T cells were trypsin
treated as described previously (28, 58). The results showed
that mutant and wt Gag proteins were pelletable following trypsin
treatment, suggesting that the mutant Gag proteins were contained
within particles (data not shown). Taken together, these results
suggest that released Gag proteins were particle associated and that
the levels of pelletable medium Gag proteins reflected the levels of
virus particles.

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|
FIG. 6.
Sucrose density gradient fractionation of HIV Gag
particles. 293T cells were transfected with wt HIV gpt and mutant
constructs. At 48 to 72 h posttransfection, supernatants were
collected and pelleted through 20% sucrose cushions. Viral pellets
were resuspended in TSE buffer. Resuspended viral pellets of each
mutant (T387, T380, and T366 [A, B, and C, respectively]) were
subjected to sucrose density gradient fractionation (20 to 60%) as
described in Materials and Methods. For direct comparison with wt HIV
particle densities, wt viral pellets were spun through the same sucrose
density gradient with mutant pellets of MT380 (E) or MN (F) or with the
pooled pellets of MT449, MT431, and MT387 (D). Each fraction was
measured for density and analyzed for Gag protein levels by immunoblot
detection. Densities of designated fractions are indicated at the top,
while mutant HIV Gag proteins and wt HIV Gag proteins Pr55, p41, and
p24 (CA) are shown on the left.
|
|
In vitro RT activity assays.
The absence of mature CA proteins
indicated that our gag mutants, except T449 and
MA, were
blocked in particle processing (Fig. 2 and 3). Since the gag
sequences covering the Gag-Pol frameshift region had been deleted in
the truncation mutants T431, T387, T380, and T366, no functional PR was
expected for these mutants or their MA deletion versions (MT431, MT387,
MT380, and MT366). Thus, it is not surprising that there were no mature
CA proteins in the mutant samples. Nevertheless, we tested the
particle-associated RT activities of all assembly-competent mutants.
Particles from wt or mutant samples were assayed by using exogenous
templates as described in Materials and Methods. As expected, no
significant RT activity was observed for truncation mutants T431, T387,
T380, and T366 and their MA deletion counterparts (MT431, MT387, and MT380), as the counts per minute of incorporated nucleotide for these
mutants were around background levels (Table
1). In contrast, the counts per minute
for the wt and the other mutants were at least threefold higher than
background levels. To obtain specific activities for each mutant, the
ratios of normalized counts per minute versus densitometer-determined
virus-associated Gag protein levels were compared with wt levels in
parallel experiments. The
MA mutant exhibited an RT activity level
approaching that of the wt, consistent with the previous results
(53). RT activity levels of the p6 deletion mutant T449 also
were comparable to wt levels. Interestingly, mutant MT449, derived from
combination of the MA and p6 deletion mutations, possessed an RT
activity of 0.5% of the wt level, although it efficiently released
particles as well as the wt (Fig. 4). Both
NC and its MA deletion
version MN also had very low RT activity levels (1 to 15%). Low RT
levels could be due to reduced stability, processing, or incorporation of Gag-Pol proteins into virions. In addition, stability of the unprocessed immature core and inefficient detergent release of Gag-Pol
fusion proteins during RT assays (54) may also account in
part for the low RT activities.
 |
DISCUSSION |
In this study, we constructed a series of HIV gag
mutants and tested their abilities to direct the assembly and release
of virus particles from 293T cells. We found that the
MA mutant, the
C-terminal truncation gag mutants T449 and T431, and the
MA version of T449 (MT449) could assemble and release virus
particles efficiently (Fig. 2 and 4). The NC deletion mutant (
NC);
the other C-terminal truncation gag mutants, T387, T380, and
T366; and the
MA versions MN, MT387, and MT380 still assembled and released virus particles, although they demonstrated defective particle
release (Fig. 2, 3, and 4). In contrast, MT366 and MN
NP virus
particles were poorly released, as no Gag proteins were detected in the
media (Fig. 3 and 4). Our results showing that truncations of the p6
(T449) or p1-p6 (T431) domains had no major effects on particle
assembly and release are consistent with previous reports (15, 24,
43, 46, 61). The evidence (Fig. 4) that the p6 deletion mutant
virions (T449 and MT449) were released efficiently while the levels of
released NC deletion mutant virions (
NC and MN) were noticeably
reduced indicates that the NC domain is more important than the p6
domain for particle assembly and release.
While almost all of our mutants directed the release of Gag proteins
from cells at some level, all of the mutants except T449, T431,
MA,
and MT449 showed a level of particle release below 50% of wt levels
(Fig. 4). Immunofluorescence studies suggested that most of these
mutants appeared to have accumulated intracellularly. However, particle
release levels did not correlate strictly with the immunofluorescence
staining patterns, as
MA, MT449, and MT431 all appeared to be
enriched at perinuclear membranes, but the MT431 protein was impaired
in release, while the
MA and MAT449 proteins were not.
Immunofluorescence staining of mutants with intact MA but deleted NC
domains (
NC, T387, T380, and T366) showed an enhanced surface
staining without a clear perinuclear ring (Fig. 5). These results
suggest that the NC domain may be involved in association with the
intracellular membranes or other cellular structural components
(52). While the results of immunofluorescence studies are
informative about where the proteins have accumulated, we do not know
whether the accumulation of mutant proteins in the cells is due to
mislocalization or to the impaired transport of mutant proteins.
Deletions downstream of gag codon 387 or 380 (mutants T387
and 380, respectively) did not prevent particle production (Fig. 2),
and most of the T387 and T380 mutant particles exhibited a density
slightly lower than that of the wt (Fig. 6A and B), in agreement with
previous work (24). However, in contrast with observations
for the baculovirus system (24, 43), which showed that
truncations involving the p2 domain failed to assemble, our mutant
T366, with a deletion of the gag sequence downstream of codon 366, still assembled and was released. This discrepancy may be
due either to different expression systems employed or to the effects
of changed amino acids in the C terminus of our mutant T366 (amino acid
residues Leu-Ala-Glu were changed to Trp-Ile-Leu [Fig. 1A]). In the
context of MA domain deletions, the MN, MT449, MT431, MT387, and MT380
constructs were still able to direct particle production, although at
remarkably reduced levels. The particles produced by these mutants
exhibited wild-type HIV densities (Fig. 6D, E, and F), while mutants
T387 and T380, which retain MA domains, showed relatively lower
particle densities. Possibly the deletion of MA from constructs T387
and T380 permitted mutant Gag cores to adapt tighter, denser
conformations, but this hypothesis has yet to be tested.
With regard to the HIV-1 CA domain, although a deletion of 56 amino
acid residues in the CA N-terminal portion by itself does not affect
particle production (7, 54), the combination of the
56-amino-acid deletion and the
MA mutation eliminated particle release (Fig. 3). In contrast, double mutants MN, MT387, and MT380, derived from the combination of the truncation mutations and the
MA
mutation, clearly could still assemble virus-like particles, although
they did not release particles as well as the wt. These results suggest
that the CA domain is most important for HIV core assembly. While most
of our HIV gag double mutants were impaired in particle
release, an extensive genetic analysis of the RSV Gag protein indicates
that deletions of over 50% of the RSV gag codons, covering
most of the CA residues, showed no major effects on particle assembly
and release (59). The fact that the RSV CA does not possess
a critical assembly domain (57) or an MHR as the HIV CA does
can account in part for the ability of the RSV large-deletion
gag mutants to efficiently assemble and release virions.
Three assembly-competent mutants,
NC, MN, and MT449, showed complete
blocks of particle processing and very low RT activities. This result
agrees with previous observations that HIV gag mutants impaired in particle processing have low RT activity levels
(54), which may be a consequence of insufficient Gag-Pol
incorporation into virions, incomplete processing, or defective Gag-Pol
dimerization (29). The fact that
NC, MN, and MT449 mutant
particles possessed RT activities but showed low PR-mediated particle
processing levels indicates that mutations may lead to conformational
changes in the Gag-Pol precursor and subsequently interfere with
Gag-Pol dimerization. In support of this concept, recent studies have suggested that domains upstream of the PR in HIV Gag-Pol can influence PR dimerization (64). However, a lack of Gag processing also may result from conformational changes of the Gag precursor which interfere with the exposure of the cleavage sites to protease action
(31, 42, 54). The finding that our p6 deletion mutant (T449)
particles possessed wt RT activity levels but showed incomplete cleavage at p24/25 also may be attributable to one of the
above-mentioned possibilities.
 |
ACKNOWLEDGMENTS |
We are grateful to Eric Barklis for continued support and
critically reviewing the manuscript. We are indebted to past lab members Y.-L. Chen, P.-W. Ts'ai, and C.-C. Yang for technical assistance. We also thank Steve S.-L. Chen (Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan) for helpful consultation about in vitro RT experiments. The hybridoma clone 183 H12-5C was a
gift provided by the AIDS Research and Reference Reagent Program,
Division of AIDS, NIAID, from Bruce Chesebro.
This work was supported by grants NSC86-2314-B010-083-M22 and
NSC87-2314-B010-051 from the National Science Council, Taiwan, Republic
of China.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Medical Research, Veterans General Hospital-Taipei, No. 201, Sec. 2, Shih-pai Rd., Shih-pai, Taipei, Taiwan 11217. Phone: 886-2-2874-2121, ext. 2655. Fax: 886-2-2874-2279. E-mail:
ctwang{at}vghtpe.gov.tw.
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Journal of Virology, October 1998, p. 7950-7959, Vol. 72, No. 10
0022-538X/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
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