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Journal of Virology, November 2007, p. 12049-12060, Vol. 81, No. 21
0022-538X/07/$08.00+0 doi:10.1128/JVI.00969-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Departments of Molecular Biology,1 Molecular and Integrative Neurosciences,2 Cell Biology,3 Chemistry,4 Skaggs Institute for Chemical Biology,5 Joint Center for Structural Genomics, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037,6 Institute for Molecular Biology and Biophysics, ETH Zürich, CH-8093 Zürich, Switzerland7
Received 4 May 2007/ Accepted 1 August 2007
This paper describes the structure determination of nsp3a, the N-terminal domain of the severe acute respiratory syndrome coronavirus (SARS-CoV) nonstructural protein 3. nsp3a exhibits a ubiquitin-like globular fold of residues 1 to 112 and a flexibly extended glutamic acid-rich domain of residues 113 to 183. In addition to the four ß-strands and two
-helices that are common to ubiquitin-like folds, the globular domain of nsp3a contains two short helices representing a feature that has not previously been observed in these proteins. Nuclear magnetic resonance chemical shift perturbations showed that these unique structural elements are involved in interactions with single-stranded RNA. Structural similarities with proteins involved in various cell-signaling pathways indicate possible roles of nsp3a in viral infection and persistence.
Published ahead of print on 29 August 2007.
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